Complexes of aryl-substituted porphyrins and naphthalenediimide (NDI): investigations by synchrotron X-ray diffraction and NMR spectroscopy

New donor-acceptor hybrids of Zn(II)-metallated 5,15-diaryl porphyrins have been designed and synthesised via the porphyrin interactions with an electron acceptor molecule, di-n-hexyl N-substituted 1,2,4,8-naphthalenetetracarboxylic diimide (NDI). Binding interactions within these supramolecular complexes were investigated in the solid state by synchrotron X-ray diffraction and probed in solution by (1)H NMR spectroscopy. The systematic modulation of the porphyrin π-density was achieved, for the first time as multiple methoxy and fluorine groups were introduced as substituents to the 5,15-diaryls of the porphyrin. For these, the variation of the porphyrin-NDI binding strengths determined by (1)H NMR titrations was shown, using the Swain's type dual parameter approach, to be closely linked with the peripheral substitution pattern of the diaryl porphyrins validated by crystallography. The new 1:1 donor-acceptor complexes formed display characteristic features of the aromatic-stacked systems, i.e. the parallel arrangement and short interplanar separation between the substituted porphyrin and NDI. Synthetic modification of electron-density on the porphyrin surface by introducing substituents at peripheral sites of functionalised porphyrins represent a general solution towards electronically tunable aromatic surfaces: an understanding of their solution and solid state behaviour will significantly improve the rational design of new functional donor-acceptor supramolecular materials with potential applications ranging from new energy materials to dye-sensitised solar cells, photovoltaics and future drug delivery devices.     

DNA as supramolecular scaffold for porphyrin arrays on the nanometer scale

Tetraphenyl porphyrin substituted deoxyuridine was used as a building block to create discrete multiporphyrin arrays via site specific incorporation into DNA. The successful covalent attachment of up to 11 tetraphenyl porphyrins in a row onto DNA shows that there is virtually no limitation in the amount of substituents, and the porphyrin arrays thus obtained reach the nanometer scale (approximately 10 nm). The porphyrin substituents are located in the major groove of the dsDNA and destabilize the duplex by deltaT(m) 5-7 degrees C per porphyrin modification. Force-field structure minimization shows that the porphyrins are either in-line with the groove in isolated modifications or aligned parallel to the nucleobases in adjacent modifications. The CD signals of the porphyrins are dominated by a negative peak arising from the intrinsic properties of the building block. In the single strands, the porphyrins induce stabilization of a secondary helical structure which is confined to the porphyrin modified part. This arrangement can be reproduced by force-field minimization and reveals an elongated helical arrangement compared to the double helix of the porphyrin-DNA. This secondary structure is disrupted above approximately 55 degrees C (T(p)) which is shown by various melting experiments. Both absorption and emission spectroscopy disclose electronic interactions between the porphyrin units upon stacking along the outer rim of the DNA leading to a broadening of the absorbance and a quenching of the emission. The single-stranded and double-stranded form show different spectroscopic properties due to the different arrangement of the porphyrins. Above T(p) the electronic properties (absorption and emission) of the porphyrins change compared to room temperature measurements due to the disruption of the porphyrin stacking at high temperature. The covalent attachment of porphyrins to DNA is therefore a suitable way of creating helical stacks of porphyrins on the nanometer scale.     

Supramolecular allosteric cofacial porphyrin complexes

Nature routinely uses cooperative interactions to regulate cellular activity. For years, chemists have designed synthetic systems that aim toward harnessing the reactivity common to natural biological systems. By learning how to control these interactions in situ, one begins to allow for the preparation of man-made biomimetic systems that can efficiently mimic the interactions found in Nature. To this end, we have designed a synthetic protocol for the preparation of flexible metal-directed supramolecular cofacial porphyrin complexes which are readily obtained in greater than 90% yield through the use of new hemilabile porphyrin ligands with bifunctional ether-phosphine or thioether-phosphine substituents at the 5 and 15 positions on the porphyrin ring. The resulting architectures contain two hemilabile ligand-metal domains (RhI or CuI sites) and two cofacially aligned porphyrins (ZnII sites), offering orthogonal functionalities and allowing these multimetallic complexes to exist in two states, "condensed" or "open". Combining the ether-phosphine ligand with the appropriate RhI or CuI transition-metal precursors results in "open" macrocyclic products. In contrast, reacting the thioether-phosphine ligand with RhI or CuI precursors yields condensed structures that can be converted into their "open" macrocyclic forms via introduction of additional ancillary ligands. The change in cavity size that occurs allows these structures to function as allosteric catalysts for the acyl transfer reaction between X-pyridylcarbinol (where X = 2, 3, or 4) and 1-acetylimidazole. For 3- and 4-pyridylcarbinol, the "open" macrocycle accelerates the acyl transfer reaction more than the condensed analogue and significantly more than the porphyrin monomer. In contrast, an allosteric effect was not observed for 2-pyridylcarbinol, which is expected to be a weaker binder and is unfavorably constrained inside the macrocyclic cavity.     

Interactions of dicarboxylic porphyrins with membranes in relation to their ionization state

The interactions of dicarboxylic porphyrins with membrane systems are discussed with particular emphasis on the effect of the charge of the porphyrin and the nature of the side-chains. The incorporation of hematoporphyrin or related dicarboxylic porphyrins within small unilamellar vesicles as membrane models is favored by a decrease of the pH in the range of physiological pH values. This effect might play an important role in the retention of porphyrins by tumors, which are more acidic than normal tissues. Kinetics studies also show that the partition of the porphyrin between the lipidic bilayer and the aqueous phase is governed by its release rate rather than by its incorporation rate.     

β-Octafluorinated tetrakis(ethoxycarbonyl)porphyrin

Tetrakis(alloxycarbonyl)porphyrin and its β-octafluoro-substituted derivatives were synthesized via Lindsey method and transformed to their zinc complexes.Single crystal X-ray structures of corresponding Zn(Ⅱ) porphyrins revealed that β-octafluorination will give more compactness of porphyrin moieties in the crystal structure owing to the hydrogen bonding interactions involving β-fluorine atoms.An unusual six-coordinated Zn(Ⅱ) was found via intramolecular coordination of oxygen atom of meso-substituents with central Zn(Ⅱ).     

Push–Pull Porphyrins via β-Pyrrole Functionalization: Evidence of Excited State Events Leading to High-Potential Charge-Separated States

A new set of free-base and zinc(II)-metallated, β-pyrrole-functionalized unsymmetrical push–pull porphyrins were designed and synthesized via β-mono- and dibrominated tetraphenylporphyrins using Sonogashira cross-coupling reactions. The ability of donors and acceptors on the push–pull porphyrins to produce high-potential charge separated states was investigated. The porphyrins were functionalized at the opposite β,β′-pyrrole positions of porphyrin ring bearing triphenylamine push groups and naphthalimide pull groups. Systematic studies involving optical absorption, steady-state and time-resolved emission revealed existence of intramolecular type interactions both in the ground and excited states. The push–pull nature of the molecular systems was supported by frontier orbitals generated on optimized structures, wherein delocalization of HOMO over the push group and LUMO over the pull group connecting the porphyrin π-system was witnessed. Electrochemical studies were performed to visualize the effect of push and pull groups on the overall redox potentials of the porphyrins. Spectroelectrochemical studies combined with frontier orbitals helped in characterizing the one-electron oxidized and reduced porphyrins. Finally, by performing transient absorption studies in polar benzonitrile, the ability of push–pull porphyrins to produce charge-separated states upon photoexcitation was confirmed and the measured rates were in the range of 10⁹ s⁻¹. The lifetime of the final charge separated state was around 5 ns. This study ascertains the importance of push–pull porphyrins in solar energy conversion and diverse optoelectronic applications, for which high-potential charge-separated states are warranted.     

Properties of polyethylene glycol supported tetraarylporphyrin in aqueous solution and its interaction with liposomal membranes

5,10,15,20-Tetrakis(4-hydroxyphenyl)porphyrin was functionalized by covalent attachment of poly(ethylene glycol) (PEG) chains of various molecular weights, 350, 2000, and 5000 Da. The properties of PEG-functionalized tetraarylporphyrins in aqueous solution and their interactions with liposomes have been studied. Electronic absorption spectroscopy, dynamic light scattering, atomic force microscopy, and fluorescence quenching were used to monitor aggregation of porphyrin chromophores and behavior of the attached PEG chains in the aqueous solution. The tendency for aggregation of porphyrin chromophores in aqueous solution and the efficiency of fluorescence quenching by KI decrease with increasing length of PEG chain linked to the porphyrin ring. The experimental results indicate that polymer clusters are present in aqueous solution of all pegylated porphyrins. The interactions between the pegylated porphyrins and phosphatidylcholine liposomes in the aqueous solution were studied using the fluorescence methods. The apparent binding constants of porphyrin chromophores to liposomes were determined. The degree of binding was found to be dependent on the molecular weight of the attached polymer.     

烟酸修饰尾式卟啉的合成及其与人血清白蛋白的相互作用

合成了烟酸分子修饰的自由卟啉o-(niacin)C2O-T(3p-OCH3)PP、p-(niacin)C2O-T(3p-OCH3)PP及锌配合物o-(niacin)C2O-T(3p-OCH3)PPZn、p-(niacin)C2O-T(3p-OCH3)PPZn.经元素分析、紫外-可见光谱、核磁共振氢谱(1HNMR)、红外(IR)光谱等对结构进行了表征,并通过量子化学方法计算了锌卟啉的最低能量构型.实验结果表明:o-(niacin)C2O-T(3p-OCH3)PPZn中侧链烟酸基团处于卟啉环上方,烟酸基团中N原子与卟啉环中Zn2+存在着Zn―N间的分子内配位作用,而p-(niacin)C2O-T(3p-OCH3)PPZn中侧链烟酸基团处于卟啉环较远的位置,一个锌卟啉的中心Zn2+与另一个锌卟啉烟酸中N原子之间存在着Zn―N间的分子间配位作用.同时,为模拟金属卟啉的生物功能,采用荧光光谱滴定法测定了金属锌卟啉与人血清白蛋白相互作用的光谱性质.荧光光谱实验结果显示:金属锌卟啉与人血清白蛋白(HSA)之间发生了较强的静态荧光猝灭作用,反应机理是以氢键或van der Waals力结合反应.按照Stern-Volmer方程、Lineweaver-Burk双倒数方程分析和处理实验数据,得到了反应的猝灭常数、结合常数和热力学参数等.     

Diastereochemically controlled porphyrin dimer formation on a DNA duplex scaffold

DNA-porphyrin conjugates were designed and synthesized for the preparation of the conformationally controlled porphyrin dimer structures constructed on a d(GCGTATACGC)2. Porphyrin derivatives were introduced to the central TATpA sequence where p represents the phosphoramidate for the attachment of the free-base porphyrin (FbP) and zinc-coordinated porphyrin (ZnP), which allows contact of the two porphyrins in the minor groove. The porphyrin dimers were characterized using CD, UV-vis, steady-state, and time-resolved fluorescence spectroscopies, indicating that the porphyrins form face-to-face conformations. Also the co-facial conformation was confirmed by comparison with spectra of the non-self-complementary duplex containing one porphyrin moiety. Introduction of zinc into porphyrin moiety destabilized the duplex formation. Two diastereomers showed different thermal stabilities and affected the conformations of porphyrin dimers. The temperature-dependent assembly and the conformational change of the porphyrin dimer on the duplex DNA were observed in the UV-vis spectra, indicating that the dynamic movement of the porphyrin dimer occurs on the duplex. The results indicate that the porphyrin dimers of DNA-FbP conjugates are overlapped clockwise and are located in the minor groove of the usual B-form DNA backbone. The interaction and conformation of two porphyrin moieties are controlled by the following three factors: (1) temperature change during and after formation of the duplex porphyrins at lower temperature; (2) diastereochemistry of the phosphoramidates where porphyrins are connected via a linker; and (3) zinc ion coordination that destabilizes the interaction of porphyrins as well duplex formation.     

Surface patterning with two-dimensional porphyrin supramolecular arrays

Monolayer arrays of a series of meso-tetra-substituted porphyrins containing octadecyloxy and carboxyl (or pyridyl) groups were prepared on the highly oriented pyrolytic graphite surface at the liquid/solid interface. It was found by means of scanning tunneling microscopy that some porphyrins from this family assemble into various patterns. Specifically, slightly undulated rows are obtained from 5,10,15-tris(4-octadecyloxyphenyl)-20-(4-pyridyl)porphyrin. Meanwhile, rows with more pronounced kinks result from 5-(4-carboxyphenyl)-10,15,20-tris(4-octadecyloxyphenyl)porphyrin. The occurrence of the kinks is dependent on the arrangement of surrounding porphyrin molecules and is determined by intricate interplay between directional hydrogen-bonding interactions and packing forces, including molecule-molecule and molecule-substrate interactions. A double-layer structure is obtained from 5,10-bis(4-carboxyphenyl)-15,20-bis(4-octadecyloxyphenyl)porphyrin, probably through cyclic hydrogen bond formation. This work proves the concept that programmed surface patterning is possible by using porphyrins incorporating directional intermolecular interaction sites.     

Water-soluble zinc porphyrins as artificial receptors for amino acids

The binding of amino acids to water-soluble zinc porphyrins in basic aqueous solution was spectrophotometrically analyzed. The amino acids were bound to the porphyrins through the coordination of the N atom with the central zinc ion. Additional attractions arise due to Coulomb interactions between the -COO(-) anion of the amino acids and the -N(CH(3))(3)(+) cation of the porphyrin substituents and due to hydrophobic interactions between the porphyrin plane and the hydrophobic substituents of the amino acids. These attractions could be explained based on the binding data. The compensatory relationships of DeltaS and DeltaH were also discussed.     

Self-assembling of the porphyrin-linked acyclic penta- and heptapeptides in aqueous trifluoroethanol

The conjugates of porphyrin with links to the acyclic penta- and heptapeptides were synthesized to mimic natural multiple porphyrin systems. The linear penta- and heptapeptide with hydrophilic/hydrophobic alternative sequences took a random structure in aqueous trifluoroethanol (TFE). However, these polypeptides took a beta-sheet structure in the same solvent when the N-terminal Cys linked to the porphyrin, suggesting that the conjugates self-assembled via the intermolecular hydrophobic interaction between the porphyrins. The circular dichroism (CD) spectra, UV/vis spectra, size exclusion chromatography (SEC), and (1)H NMR spectroscopy supported the self-assembling. In the self-assembled structure of the pentapeptide linking porphyrin at the p-phenyl position (9), the porphyrins were involved in two porphyrin-porphyrin interactions, i.e., the side-by-side interaction between the neighboring polypeptide chains and the face-to-face interaction between the first and the third peptide chains. The CD spectra of 9 showed two sets of Cotton effects probably arising from these two interactions. The UV/vis spectra also supported the above interpretation, showing multiple absorptions in the longwave and shortwave shifted regions. The SEC analyses showed the assembled structure of the conjugates. The (1)H NMR signals of the porphyrin rings of 9 were hardly observed in D(2)O-CD(3)OD because of the shortened spin-spin relaxation time T(2)().     

Pentacene‐Fused Diporphyrins

In this work, we report the synthesis, spectroscopic characterization, and theoretical analysis of a linearly conjugated pentacene‐fused porphyrin dimer and cross‐conjugated quinone‐fused dinaphtho[2,3]porphyrins. These multichromophoric systems display non‐typical UV‐visible absorptions of either porphyrins or pentacenes/quinones. UV‐visible, emission and magnetic circular dichroism (MCD) spectroscopy suggest strong electronic interactions among the multichromophores in the system. DFT calculations revealed the delocalization of the HOMOs and LUMOs spanning the entire dimer and linker assembly. The pentacene‐fused porphyrin dimer is significantly more stable than both the corresponding pentacene and the heptacene derivatives. The availability of these huge π‐extended and electronically highly interactive multichromophoric systems promises unprecedented electronic and photophysical properties.     

Noncovalent binding between fullerenes and protonated porphyrins in the gas phase

Noncovalent interactions between protonated porphyrin and fullerenes (C?? and C??) were studied with five different meso-substituted porphyrins in the gas phase. The protonated porphyrin-fullerene complexes were generated by electrospray ionization of the porphyrin-fullerene mixture in 3:1 dichloromethane/methanol containing formic acid. All singly protonated porphyrins formed the 1:1 complexes, whereas porphyrins doubly protonated on the porphine center yielded no complexes. The complex ion was mass-selected and then characterized by collision-induced dissociation with Xe. Collisional activation exclusively led to a loss of neutral fullerene, indicating noncovalent binding of fullerene to protonated porphyrin. In addition, the dissociation yield was measured as a function of collision energy, and the energy inducing 50% dissociation was determined as a measure of binding energy. Experimental results show that C?? binds to the protonated porphyrins more strongly than C??, and electron-donating substituents at the meso positions increase the fullerene binding energy, whereas electron-withdrawing substituents decrease it. To gain insight into π-π interactions between protonated porphyrin and fullerene, we calculated the proton affinity and HOMO and LUMO energies of porphyrin using Hartree-Fock and configuration interaction singles theory and obtained the binding energy of the protonated porphyrin-fullerene complex using density functional theory. Theory suggests that the protonated porphyrin-fullerene complex is stabilized by π-π interactions where the protonated porphyrin accepts π-electrons from fullerene, and porphyrins carrying bulky substituents prefer the end-on binding of C?? due to the steric hindrance, whereas those carrying less-bulky substituents favor the side-on binding of C??.     

Effects of porphyrin substituents on film structure and photoelectrochemical properties of porphyrin/fullerene composite clusters electrophoretically deposited on nanostructured SnO2 electrodes

We have systematically examined the substituent effects of meso-tetraphenylporphyrins on film structures and the photoelectrochemical properties of the composite clusters of free-base porphyrin and C(60) electrophoretically deposited on nanostructured SnO(2) electrodes. The photocurrent generation efficiency was found to correlate with the complexation ability of the porphyrin for C(60). Basically, the incident photon-to-current efficiency (IPCE) value was increased with increasing relative amounts of the porphyrin versus C(60) in the films. The unique molecular arrangement of the porphyrin with the simple, specific substituents (i.e., methoxy groups at the meta-positions of the meso-phenyl rings of tetraphenylporphyrins (3,5-OMeTPP; TPP=tetraphenylporphyrin)) and C(60) on SnO(2) electrodes resulted in the largest IPCE value (ca. 60 %) among this type of photoelectrochemical device. The rapid formation of the composite clusters and microcrystals from the combination of 3,5-OMeTPP and C(60) in a mixed solvent is unique as the association is accelerated by intermolecular interactions (i.e., hydrogen-bonding and CH-pi interactions) between the methoxy groups of the porphyrins and the porphyrin/C(60), in addition to the pi-pi interactions between the porphyrins/C(60) and C(60) molecules. Both the films and single crystals composed of the porphyrin and C(60) exhibited remarkably high electron mobility (7x10(-2) and 0.4 cm(2) V(-1) s(-1)), which is comparable to the value for highly efficient bulk heterojunction solar cells. Our experimental results have successfully demonstrated the importance of nanostructured electron- and hole-transporting pathways in bulk heterojunction solar cells. Such a finding will provide basic and valuable information on the design of molecular photovoltaics at the molecular level.     

Triplet behavior in weakly coupled chromophors in covalent pyridyl porphyrin-polymer systems

The photophysical properties of the 5-(4-pyridyl)-10,15,20-tri(4-methyloxyphenyl)porphyrins covalently linked to polyethylene glycol – PEG of different molecular weights (35000, 20000 and 8000) dissolved in dimethylsulfoxide were studied. The singlet and triplet states of the porphyrin species behavior were discussed in terms of fluorescence and thermal relaxation processes. The absorption, fluorescence and photothermal experiments showed that in the porphyrins linked to the PEG systems in dimethylsulfoxide the dye moieties occur in weakly interacting dimers. The triplet state enhancement in the 5-(4-pyridyl)-10,15,20-tri(4-methyloxyphenyl)porphyrins covalently linked to PEG was discussed.It was shown that even that the weak interaction of the porphyrin species in the covalent systems with PEG is not detectable by the absorption and only slightly by fluorescence, it is possible to be performed by the complementary spectroscopic methods like photoacoustics and photothermal time resolved spectroscopy.     

Studies on porphyrin-quinhydrone complexes: molecular recognition of quinone and hydroquinone in solution.

Free-base and zinc(II) porphyrins bearing either one, two, or four hydroquinone entities at the meso positions are shown to bind quinones in solutions via a quinhydrone pairing mechanism. Electrochemical studies reveal that the quinhydrone complexes are stabilized by charge-transfer interactions between the donor (hydroquinone) and the acceptor (quinone). The redox potentials of the quinhydrone complexes are governed by the potentials of the quinones utilized to form quinhydrone. The (1)H NMR studies reveal that the quinhydrone complexes are stabilized by H-bonding in addition to the charge-transfer interactions. Singlet emission studies have shown that the fluorescence quenching of the porphyrin increases with an increase in the number of receptors, i.e., hydroquinone entities on the porphyrin macrocycle. Control experiments performed by using zinc porphyrin bearing a dimethoxyphenyl group, i.e., a receptor entity with no H-bonding ability, indicate that the H-bonding plays an important role in quinhydrone formation. Porphyrin-quinhydrone formed by using covalently linked porphyrin-quinone and hydroquinone present in solution shows fluorescence enhancement. The measured fluorescence quantum yields, phi(f), are found to depend on the metal ion in the porphyrin cavity and the oxidation potential of the employed hydroquinones. The present studies also reveal that the measured phi(f) values depend on how the quinhydrone is linked to the porphyrin macrocycle, i.e., either through quinone or hydroquinone. Generally, porphyrin-quinhydrone formed by hydroquinone-appended porphyrins shows decreased phi(f) values as compared to porphyrin-quinhydrone formed by quinone-appended porphyrins.     

Self-assembly and liquid-crystalline properties of 5-fluoroalkylporphyrins

We report three crystal structures of a synthetic 5-fluoroalkylporphyrin molecule that was programmed for self-assembly. All the X-ray structures of zincated and free-base porphyrins Zn2 b, Zn5 a, and 2 b revealed rigorous pi-pi stacking and extremely hydrophobic interactions. Other the other hand, the strong aggregation of 5-fluoroalkylporphyrins in solution was also found. Interestingly, the regular nanopore formation of the 5-fluoroalkylporphyrin was visualized by atomic force microscopy (AFM). Importantly, the 5-fluoroalkylporphyrins possess liquid-crystalline properties that were confirmed by using a combination of differential scanning calorimetry (DSC) and polarizing optical microscopy (POM) techniques. By comparison, the self-assembly of non-fluorine-containing porphyrins with similar structure showed much lower aggregation ability, as investigated by NMR techniques. Additionally, no birefringent mesophase was observed for the non-fluorine-containing porphyrin.     

Three Short Stories about Hexaarylbenzene–Porphyrin Scaffolds

A feasible two‐step synthesis and characterization of a full series of hexaarylbenzene (HAB) substituted porphyrins and tetrabenzoporphyrins is presented. Key steps represent the microwave‐assisted porphyrin condensation and the statistical Diels–Alder reaction to the desired HAB‐porphyrins. Regarding their applications, they proved to be easily accessible and effective high molecular mass calibrants for (MA)LDI mass spectrometry. The free‐base and zinc(II) porphyrin systems, as well as the respective tetrabenzoporphyrins, demonstrate in solid state experiments strong red‐ and near‐infrared‐light emission and are potentially interesting for the application in “truly organic” light‐emitting devices. Lastly, they represent facile precursors to large polycyclic aromatic hydrocarbon (PAH) substituted porphyrins. We prepared the first tetra‐hexa‐peri‐hexabenzocoronene substituted porphyrin, which represents the largest prepared PAH‐porphyrin conjugate to date.     

Excitonic coupling interactions in the self-assembly of perylene-bridged bis(β-cyclodextrin)s and porphyrin

A supramolecular self-assembly has been constructed by perylene-bridged bis(β-cyclodextrin)s with water-soluble porphyrin through hydrophobic interactions, showing strong excitonic coupling interactions between perylene backbones and included porphyrins.