Optical and spectroscopic characteristics of oleate adsorption as revealed by FTIR analysis

Fourier transform infrared transmission (FTIR/TS), external reflection (FTIR/ERS), and internal reflection (FTIR/IRS) spectroscopies are three important sampling techniques for the study of adsorbed surfactants. The optical and spectral characteristics of a three-phase system were calculated using theoretical simulation and discussed based on experimental results for oleate adsorption at the air/water interface and at the water/fluorite interface. It is shown that a thorough understanding of the optical properties and spectral characteristics from FTIR analysis helps to improve the experimental design and explanation of experimental results and is important to properly quantify surfactant interfacial adsorption phenomena.     

Distribution patterns of firearm discharge residues as revealed by neutron activation analysis

A systematic investigation using a variety of handguns has revealed the existence of distinguishable distribution patterns of firearm discharge residues on surfaces below the flight path of a bullet. The residues are identifiable even at distances of 12 meters from the gun using nondestructive neutron activation analysis. The results of these investigations show that the distribution pattern for a gun is reproducible using similar ammunition and that there exist two distinct regions to the patterns developed between the firearm and the target—one with respect to the position of the gun and the other in the vicinity of the target. The judicious applications of these findings could be of significant value in criminal investigations.     

Structure of native and regenerated cellulose as revealed by proton NMR analysis

Differences in fiber structure between cotton and cuprammonium rayon are studied by a refined broad-line proton NMR analysis of samples swollen with deuterated dimethyl sulfoxide, which has no effect on the spectra but enhances differences in molecular mobility between crystalline and noncrystalline regions. The spectra obtained are decomposed into four components: broad, medium, narrow, and extremely narrow. These components are identified as contributions, respectively, from crystalline and rigid noncrystalline (frozen glassy) material, a noncrystalline glassy component exhibiting local segmental motion, a noncrystalline rubbery component exhibiting liquidlike molecular motion, and protons included in DMSO-d₆ as an impurity. The mass fraction of the narrow component in cotton was about 0.01, whereas it was as high as 0.18 in cuprammonium rayon. It is concluded that even in the swollen state, native cellulose is devoid of a liquidlike mobile component, but regenerated cellulose contains a considerable amount of a noncrystalline component involving liquidlike segmental motion of molecules.     

Radical dynamics of puerarin as revealed by laser flash photolysis and spin density analysis

Puerarin, a C-glycoside of daidzein, forms upon direct photoexcitation in acetonitrile an excited-state with a lifetime of 4.2 micros assigned by oxygen quenching and sensitized formation of triplet zeaxanthin as a triplet and phenoxyl radicals of ms lifetime insensitive to oxygen and with spin density delocalized over the ACB isoflavonoid ring system, [ACB]*, as shown by laser flash photolysis and theoretical spin density calculations. Photoexcitation of A-ring 7-phenolate puerarin yields a [AC]* radical, which converts into the [ACB]* radical with a rate constant of 3.6 x 10(5) s(-1) in 5% methanolic acetonitrile in a process triggered by B-ring deprotonation (4'-phenol). For the 7-phenolate with the 4'-phenol derivatized to yield a propyl anisole, no rearrangement of the initially formed [AC]* radical was observed. With the A-ring phenol derivatized, the 7-propyl-4'-phenolate forms a radical with spin density delocalized over the CB ring system, [CB]*, together with a minor fraction of [ACB]* due to propyl radical dissociations confirmed by BDE-calculations. Dianionic puerarin forms initially the [ACB]* radical, which is converted into the [CB]* radical in a slower process (1.6 x 10(4) s(-1)) assigned to 7-methylation. The radical dynamics is discussed in relation to puerarin/carotenoid antioxidant synergism at water/lipid interphases.     

Multitargeting by curcumin as revealed by molecular interaction studies

Curcumin (diferuloylmethane), the active ingredient in turmeric (Curcuma longa), is a highly pleiotropic molecule with anti-inflammatory, anti-oxidant, chemopreventive, chemosensitization, and radiosensitization activities. The pleiotropic activities attributed to curcumin come from its complex molecular structure and chemistry, as well as its ability to influence multiple signaling molecules. Curcumin has been shown to bind by multiple forces directly to numerous signaling molecules, such as inflammatory molecules, cell survival proteins, protein kinases, protein reductases, histone acetyltransferase, histone deacetylase, glyoxalase I, xanthine oxidase, proteasome, HIV1 integrase, HIV1 protease, sarco (endo) plasmic reticulum Ca(2+) ATPase, DNA methyltransferases 1, FtsZ protofilaments, carrier proteins, and metal ions. Curcumin can also bind directly to DNA and RNA. Owing to its β-diketone moiety, curcumin undergoes keto-enol tautomerism that has been reported as a favorable state for direct binding. The functional groups on curcumin found suitable for interaction with other macromolecules include the α, β-unsaturated β-diketone moiety, carbonyl and enolic groups of the β-diketone moiety, methoxy and phenolic hydroxyl groups, and the phenyl rings. Various biophysical tools have been used to monitor direct interaction of curcumin with other proteins, including absorption, fluorescence, Fourier transform infrared (FTIR) and circular dichroism (CD) spectroscopy, surface plasmon resonance, competitive ligand binding, Forster type fluorescence resonance energy transfer (FRET), radiolabeling, site-directed mutagenesis, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS), immunoprecipitation, phage display biopanning, electron microscopy, 1-anilino-8-naphthalene-sulfonate (ANS) displacement, and co-localization. Molecular docking, the most commonly employed computational tool for calculating binding affinities and predicting binding sites, has also been used to further characterize curcumin's binding sites. Furthermore, the ability of curcumin to bind directly to carrier proteins improves its solubility and bioavailability. In this review, we focus on how curcumin directly targets signaling molecules, as well as the different forces that bind the curcumin-protein complex and how this interaction affects the biological properties of proteins. We will also discuss various analogues of curcumin designed to bind selective targets with increased affinity.     

p-Hydroxymercuribenzoate as thiol-protein modifier for simultaneous determination of glycolytic enzymes by hydrophobic-interaction chromatography

Summary The use of hydrophobic-interaction chromatography (HIC) is proposed for the simultaneous determination of more than one thiol-protein after formation of the corresponding mercury mercaptides withp-hydroxymercuribenzoate (PHMB). The new chromatographic procedure, based on the HIC separation of the modified proteins from each other and from excess organomercury reagent has been successfully applied to the quantitative determination of phosphoglucose isomerase (PGI) and phosphoglucose mutase (PGM) in crude PGI powder, and of L-lactate dehydrogenase, PGM and aldolase in crude pyruvate kinase from rabbit muscle. The suitability of²⁰³Hg-labelled PHMB has been tested in the analysis of mixtures, which give barely distinguishable UV-peaks owing to the presence of other non-thiol components in the sample. For this purpose glyceraldehyde 3-phosphate dehydrogenase (GAPDHy) and PGIy from bakers yeast have been considered. Results obtained in experiments performed by both procedures are reported.     

Aggregation of polyene antibiotics as revealed by absorption spectroscopy

Methanolic solutions of the heptaene macrolide antibiotics, namely amphotericin B and hamycin, are molecular dispersions. These polyenes were found to be self-aggregated in neutral aqueous solution. The aggregates of hamycin dissociate in acidic or basic aqueous solutions. The smaller chain aliphatic alcohols have a higher solvating power for hamycin.     

The interfacial tension concept,as revealed by fluctuations

A simple, didactic model that could have conclusively interpreted the complexity of specific salt (Hofmeister-) effects on protein solubility and function, using a single physical quantity as a central parameter, has long been missing. Via surveying a row of recent papers we show in this review that a phenomenological formalism based on the salt-induced change of protein–water interfacial tension (∆γ) is able to account for a wide range of Hofmeister effects, including also such “exceptions”, where inverse or “V-shaped” Hofmeister series occurs. A close relationship between protein–water interfacial tension and conformational fluctuations is pinpointed on theoretical grounds, then it is shown how one can use a complex experimental arsenal to demonstrate conformational fluctuations on two prototypical proteins, the membrane protein bacteriorhodopsin and the cytoplasmic protein myoglobin. Finally, via the results of recent and new molecular dynamics simulations on a model peptide, the tryptophan-cage miniprotein, independent evidences are given in favor of the interfacial tension concept, at the same time demonstrating the predictive power of the theory. It is shown that salt-induced fluctuation changes of surface-exposed amino acid groups can be used as a sensitive measure for mapping the local features of Hofmeister effects on protein conformations. General implications of the interfacial tension concept are also discussed.     

Molecular dynamics of solid polymers as revealed by deuteron NMR

Pulsed deuteron NMR spectroscopy is described, which has recently been developed to become a powerful tool for studying molecular dynamics in solid polymers. It is shown that by analyzing the line shapes of²H absorption spectra and spectra obtained via solid echo and spin alignment, respectively, both type and timescale of rotational motions can be determined over an extraordinary wide range of characteristic frequencies, approximately 10 MHz to 1 Hz. By applying these techniques to selectively deuterated polymers, motional mechanisms involving different segments of the monomer unit can be monitored. In addition, motional heterogeneities in glassy polymers can be detected. The information about polymer dynamics available now is illustrated by a number of experimental examples. The chain motion in the amorphous regions of linearpolyethylene is discussed in detail and it is shown that it can clearly be distinguished from the chain motion of an amorphous polymer above the glass transition, wherepolystyrene is used as an example. Localized motions in the glassy state are illustrated through the jump motion phenyl groups exhibit both in the main chain (polycarbonate) and as a side group (polystyrene). The latter polymers also serve as examples for detecting motional heterogeneity. Finally, the mobility in novel classes of systems,liquid crystalline polymers andpolymer model membranes as revealed by²H NMR are described.     

Effect of gamma-irradiation on morphology of copolymer of tetrafluoroethylene with hexafluoropropylene as revealed by thermomechanical analysis and radiothermoluminescence

The morphologies of different commercial forms of the copolymer of tetrafluoroethylene with hexafluoropropylene (FEP) were investigated by thermomechanical analysis. Both granules and powders of FEPs have similar morphologies, but different temperatures for phase transitions. Irradiation reduces the crystallinity of the FEPs and results in a transformation from the crystalline to the amorphous form. After heating of various forms of FEP irradiated at 77 K, there are three intense maxima of radiothermoluminescence in the temperature ranges: 150–144, 174–167, and 210–206 K. The nature of the radiothermoluminescence and the phase transitions of the FEPs as a result of gamma—irradiation are discussed.     

Media containing aromatic compounds induce peculiar proteins in Acinetobacter radioresistens, as revealed by proteome analysis.

An Acinetobacter radioresistens strain able to grow on phenol or benzoate as sole carbon and energy source through the beta-ketoadipate pathway was isolated in our laboratories. In previous research, we found a different expression of catechol-1,2-dioxygenase isoenzymes (C-1,2-O) depending on the growth substrate (phenol or benzoate). In the present study, we used proteome techniques to extend our investigation to other enzymes involved in the aromatic degradation pathway. Since the first nontoxic metabolite in this route is cis,cis-muconic acid, we focused our attention on the enzymes leading to this compound, chiefly phenol hydroxylase (PH), benzoate dioxygenase (BD), cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (D) and C-1,2-O. In particular, the A. radioresistens proteome was monitored under different growth substrate conditions, using acetate, benzoate, or phenol as sole carbon source. We compared the protein maps by software image analysis and detected marked differences, suggesting the inducibility of most enzymes. This research also sought to evaluate the conditions allowing the best expression of enzymes to be used in immobilized systems suitable for bioremediation. The experimental data indicate that benzoate is the best carbon source to gain the highest amount of C-1,2-O and D, while phenol is the best growth substrate to obtain PH.     

Diffusion on a nanoparticle surface as revealed by electrochemical NMR

Surface diffusion of chemisorbed CO (from MeOH electrochemisorption) on pure and Ru-modified nanoscale Pt electrocatalyst surfaces has been investigated by solid-state electrochemical NMR (EC-NMR) in the presence of supporting electrolyte. Temperature-dependent nuclear spin-spin and spin-lattice relaxation measurements enable the diffusion activation energy, E, to be deduced. It is shown that the activation energy E correlates with the steady state current for MeOH electro-oxidation. A simple two-dimensional collision theory model is proposed to explain this intriguing observation, which may provide new mechanistic insights into the promotion of CO-tolerance in Pt/Ru fuel cell catalysts.     

The mechanism of vesicle fusion as revealed by molecular dynamics simulations

We describe molecular dynamics simulations elucidating the molecular details of the process of fusion for small lipid vesicles. The simulations are based on a coarse grained (CG) lipid model that accurately represents the lamellar state of a variety of phospholipids and enables us to observe intermediate stages during fusion at near atomic detail. Simulations were conducted on a variety of systems containing common phospholipids such as phosphatidylcholine (PC), phosphatidylethanolamine (PE), lysoPC, and mixtures of the above. The fusion intermediates found are in general agreement with the stalk-pore mechanism. Transient pores sometimes form adjacent to the stalk, however, resulting in the mixing of lipids from the outer and inner monolayers. The speed of stalk formation and the opening of the fusion pore can be modulated by altering the lipid composition in qualitative agreement with experimental observations.     

Nonlinear elastic properties of solid polymers as revealed by Brillouin spectroscopy

In order to study the anharmonic elastic behaviour of solid polymers, we introduce a Brillouin technique, including the appropriate theoretical background, to obtain the complete tensor of elastic stiffness constants of third-order. First results are reported for glassy polycarbonate.This publication is kindly dedicated to Prof. Dr. W. Pechhold on occasion of his 60th birthday.     

Photophysical properties of DASPMI as revealed by spectrally resolved fluorescence decays

Photophysical properties of 2-(4-(dimethylamino)styryl)-1-methylpyridinium iodide (DASPMI) in various solvents were investigated using time- and space-correlated single photon counting. DASPMI is known to selectively stain mitochondria in living cells.1,2 The uptake and fluorescence intensity of DASPMI in mitochondria is a dynamic measure of membrane potential. Hence, an endeavor has been made to elucidate the mechanism of DASPMI fluorescence by obtaining spectrally resolved fluorescence decays in different solvents. A biexponential decay model was sufficient to globally describe the wavelength-dependent fluorescence in ethanol and chloroform. While in glycerol, a three-exponential decay model was necessary for global analysis. In the polar low-viscous solvent water, a monoexponential decay model fitted the decay data. The sensitivity of DASPMI to solvent viscosity was analyzed using various proportions of glycerol-ethanol mixtures. The lifetimes were found to increase with increasing solvent viscosity. The negative amplitudes of the short lifetime component found in chloroform and glycerol at the longer wavelengths validated the formation of new excited-state species from the initially excited state. Time-resolved emission spectra in chloroform and glycerol showed a biphasic increase of spectral width and emission maxima. The spectral width had an initial fast increase within 150 ps and a near constant thereafter. A three-state model of generalized scheme, on the basis of successive formation of locally excited state (LE), intramolecular charge transfer state (ICT), and twisted intramolecular charge transfer (TICT) state, has been proposed to explain the excited-state kinetics. The presumed role of solvation dynamics of ICT and TICT states leading to the asymmetrical broadening and structureless fluorescence has been substantiated by the decomposition of time-resolved emission spectra in chloroform, glycerol, and ethanol/glycerol mixtures.     

Chemiluminescence of diphenoyl peroxide electron transfer revealed by laser spectrophotometric analysis

The reaction of diphenoyl peroxide with a series of electronically excited electron donors was investigated by nanosecond laser spectroscopy. The results indicate that electron transfer from the excited state to the peroxide is the predominant reaction. The radical ions formed in this process may diffuse from the solvent cage or annihilate to regenerate the excited state. Kinetic data is presented that show an analogous process occurs for ground state electron donors resulting in chemilumine escence by the chemically initiated electron exchange luminescence (CIEEL) mechanism.     

Enzyme-catalysed nitrate reduction-themes and variations as revealed by protein film voltammetry

Protein film voltammetry has been used to define the catalytic performance of two nitrate reductases: the respiratory nitrate reductase, NarGH, from Paracoccus pantotrophus and the assimilatory nitrate reductase, NarB, from Synechococcus sp. PCC 7942. NarGH and NarB present distinct "fingerprints" of catalytic activity when viewed in this way. Potentials that provide insufficient driving force for significant rates of nitrate reduction by NarB result in appreciable rates of nitrate reduction by NarGH. However, both enzymes display complex modulations in their rate of substrate reduction when viewed across the electrochemical potential domain.