Photosensitized reduction and DNA covalent binding of aziridinylquinones

Photolysis of anaerobic aqueous mixtures (at wavelength maxima above 600 nm and at pH 7.4) containing either aluminum phthalocyanine tetrasulfonate (AlPcS₄), chlorin e6 (CHLORIN), pheophorbide-a (PHEO) or a novel tetracationic phthalocyanine derivative (TETCHLORIN) in the presence of the quinones diaziquone (AZQ), carboquone (CARBOQ) or 2,5-dicloro-diaziridinyl-1,4-benzoquinone (AZDClQ) produces the corresponding semiquinones. Photolysis of these mixtures under the conditions stated above, but in the presence of DNA and at pH 5.5 produces quinone–DNA covalent adducts. Absorption bands seen in irradiated solutions suggest binding of these quinones to DNA through the open aziridine ring. In general, the quinone CARBOQ yielded the largest amounts of adducts photosensitized by the dyes studied here. No quinone–DNA adducts were detected if samples were irradiated at pH 7.4.Thus, both photoreduction of these quinones and an acidic environment are needed for these quinones to bind DNA. These results suggest a potential mode of therapy with special applications to hypoxic regions in solid tumors which are characterized by an acidic environment.     

EXPLORATORY PHOTOCHEMISTRY OF 5-AZIDO-8-ALKOXY–SUBSTITUTED PSORALENS FREE AND BOUND TO DNA

5-Azido-8-alkoxy psoralens were synthesized. Laser flash photolysis (LFP: XeF, 351 nm, 55 mJ, 17 ns) of the azides in acetonitrile or benzene solution produces the triplet nitrene and a small amount of ketenimine. Laser flash photolysis of the azides in methanol or aqueous solution cleanly produces the triplet nitrene. In aqueous solution containing highly polymerized calf thymus DNA, LFP produces a mixture of triplet nitrene and ketenimine corresponding to photolysis of free and bound psoralen, respectively. The two transients decay slowly but at different rates. Assignment of the transient spectra were secured by matrix EPR and UV-visible spectroscopy. The triplet nitrene lifetime is the same in buffer and in the presence and absence of calf thymus DNA. The results explain why psoralen azides are unable to efficiently nick plasmid DNA pBR322 upon UV activation.     

Water-catalyzed O-H insertion/HI elimination reactions of isodihalomethanes (CH2X-I, where X = Cl, Br, I) with water and the dehalogenation of dihalomethanes in water-solvated environments

A combined experimental and theoretical investigation of the ultraviolet photolysis of CH2XI (where X = Cl, Br, I) dihalomethanes in water is presented. Ultraviolet photolysis of low concentrations of CH2XI (where X = Cl, Br, I) in water appears to lead to almost complete conversion into CH2(OH)2 and HX and HI products. Picosecond time-resolved resonance Raman (ps-TR3) spectroscopy experiments revealed that noticeable amounts of CH2X-I isodihalomethane intermediates were formed within several picoseconds after photolysis of the CH2XI parent compound in mixed aqueous solutions. The ps-TR3 experiments in mixed aqueous solutions revealed that the decay of the CH2X-I isodihalomethane intermediates become significantly shorter as the water concentration increases, indicating that the CH2X-I intermediates may be reacting with water. Ab initio calculations found that the CH2X-I intermediates are able to react relatively easily with water via a water-catalyzed O-H insertion/HI elimination reaction to produce CH2X(OH) and HI products, with the barrier for these reactions increasing as X changes from Cl to Br to I. The ab initio calculations also found that the CH2X(OH) product can undergo a water-catalyzed HX elimination reaction to make H2C=O and HX products, with the barrier to reaction decreasing as X changes from Cl to Br to I. The preceding two water-catalyzed reactions produce the HI and HX leaving groups observed experimentally, and the H2C=O product further reacts with water to make the other CH2(OH)2 product observed in the photochemistry experiments. This suggests that that the CH2X-I intermediates react with water to form the CH2(OH)2 and HI and HX products observed in the photochemistry experiments. Ultraviolet photolysis of CH2XI (where X = Cl, Br, I) at low concentrations in water-solvated environments appears to lead to efficient dehalogenation and release of two strong acid leaving groups. We very briefly discuss the potential influence of this photochemistry in water on the decomposition of polyhalomethanes and halomethanols in aqueous environments.     

Implications of enzymatic, acidic and thermal hydrolysis of DNA on the occurrence of cross-linked melphalan DNA adducts

Calf thymus DNA was treated with melphalan, a nitrogen mustard, and the formation of melphalan cross-linked DNA adducts was investigated. These cross-linked adducts could not be detected either in the enzymatically or in the thermally generated DNA hydrolysates. However, a search for DNA cross-linked adducts in the hydrolysates obtained under acidic conditions revealed the presence of different types of cross-links, mainly containing an adenine moiety. These results are very important because they show that the detection of cross-links is dependent on the hydrolytic procedure used and that these cross-linked adducts are formed under totally different reaction conditions from those in in vivo situations. This can explain the very low abundance or even the absence of cross-linked adducts in nitrogen mustard treated animals. The generally accepted theory that the anti-cancer activity of bifunctional mustards such as melphalan is due to cross-linking of DNA strands remains therefore from our point of view questionable.     

ADENOSINE-MEDIATED PHOTOREACTION OF 4,5',8-TRIMETHYLPSORALEN WITH ALCOHOLS

Abstract— Irradiation of thin films consisting of 4,5',8-trimethylpsoralen (TMP), adenosine and small amounts of alcohols led to TMP-alcohol photoadducts in addition to TMP-adenosine photoadducts. Four TMP-ethanol and two TMP-methanol adducts have been separated and characterized. Covalent bonds were formed between the 4-carbon of TMP and the α-carbon to the hydroxy group in the alcohols. The TMP-alcohol photoadducts were formed only in the TMP film containing small amounts of alcohol and adenosine. Furthermore, no photoadduct of TMP and ribose was detected upon photolysis of a TMP-ribose film, suggesting that the adenine moiety plays a specific role in the reaction. The interaction of adenosine with psoralens in a dry film may be related to the DNA sequence selectivity observed for the photoreaction of psoralens with DNA.     

Photodissociation of hydrogen halide molecules on free ice nanoparticles

Photodissociation of water clusters doped with HX(X=Br,Cl), molecules has been studied in a molecular beam experiment. The HX(H2O)n clusters are dissociated with 193 nm laser pulses, and the H fragments are ionized at 243.07 nm and their time-of-flight distributions are measured. Experiments with deuterated species DBr(H2O)n and HBr(D2O)n suggest that the photodissociation signal originates from the presence of the HX molecule on the water cluster, but does not come directly from a photolysis of the HX molecule. The H fragment is proposed to originate from the hydronium molecule H3O. Possible mechanisms of the H3O production are discussed. Experimental evidence suggests that acidic dissociation takes place in the cluster, but the H3O+ ion remains rather immobile.     

Detection of reactive free radicals derived from nucleosides by liquid chromatography coupled to tandem mass spectrometry of DMPO spin trapping adducts

In this study, reactive free radicals derived from several nucleosides were spin trapped by 5,5-dimethyl-1-pyrroline N-oxide (DMPO) and then detected by high-performance liquid chromatography coupled to electrospray ionization tandem mass spectrometry (HPLC/ESI-MS/MS). This method provides a specific detection of spin trapping adducts derived from nucleosides with a very high sensitivity: quantities as low as 0.5 picomoles of spin trapping adducts corresponding to concentrations of 2.5 10(-8) mol . L(-1) were detected. Different spin trapping adducts were characterized by HPLC/ESI-MS/MS in three well-known systems producing free radicals photochemically: the photolysis of 5-halo-2'-deoxyuridines, the photolysis of 5-thiophenylmethyl-2'-deoxyuridine and the photolysis of thymidine with menadione bisulfite as a photosensitizer. A new radical photoreactivity of uridine derivatives was also detected by this method both at the nucleoside and at the RNA level, showing that the method is also relevant for studying spin trapping adducts derived from DNA and RNA strands.     

Azobridges from azines, XVII. Intra- and intermolecular [3+2] cycloaddition between nonstabilized azomethineimines and alkenes

Azo compounds 1 and 3 containing a CC-double bond in a parallel but distant position are quatemized by Me₃OBF₄ to 1,MeBF₄ and 3,MeBF₄, whereas MeI produces the cage compounds 2,HX and 4,HX. These [3+2] cycloadducts also are quantitatively formed from 1,MeBF₄ and 3,MeBF₄ with catalytic amounts of azo compounds. Intermolecular [3+2] cycloadditions occur with a mixture of DBH (5) or DBO (8), MeI and a variety of alkenes (→ HI) salts of (6, 7, 9 — 12). The intermediate azomethineimines, if stabilized by a fluorenylidene group, can be isolated (20, 22,24), but not, however, in the presence of a close parallel CC-bond (25 → 26).     

Simultaneous determination of allantoin, hypoxanthine, xanthine, and uric acid in serum/plasma by CE

Allantoin (All) is an oxidative end product of purines in mammals. The small amount of All present in human plasma or serum results from free radical action on urate and may provide a stable marker of in vivo free radical activity. Because free radicals have been implicated in the development and progression of atherosclerosis, this study focused on the metabolic compounds of the All pathway. We propose a new fast CE (CE/UV) method for the simultaneous determination of All, uric acid (UA), hypoxanthine (HX), and xanthine (X) in human plasma. These products were quantified in the plasma of patients with chronic renal failure before hemodialysis (n = 6), patients with chronic heart failure (n = 6) and controls (n = 6). The filtered plasma were diluted ten-fold before the direct injection in CE/UV (195 nm), which allows separating the four compounds in less than 13 min. The metabolites were detectable at concentrations of 0.3-0.6 micromol/L. The method was linear over the range 0.5-150 micromol/L for All, HX, and X and 10-1500 micromol/L for UA (r > 0.99). The analytical performance of this method is satisfactory with intra-assay CV < 3.4%, inter-assay CV < 5% (HX and X < 7%), and recovery (93-101%). The proposed CE-UV method appears to be a useful tool for studying physiological and pathological changes of HX, UA, and All levels in plasma samples, the latter being a possible indicator of free radical damage in vivo.     

Simultaneous determination of uric acid, xanthine and hypoxanthine at poly(pyrocatechol violet)/functionalized multi-walled carbon nanotubes composite film modified electrode

A sensitive and selective electrochemical method was developed for simultaneous determination of uric acid (UA), xanthine (XA) and hypoxanthine (HX) based on a poly (pyrocatechol violet)/carboxyl functionalized multi-walled carbon nanotubes composite film modified electrode. The preparation and basic electrochemical performance of the novel composite film modified glassy carbon electrode were investigated in details. The electrochemical behaviors of UA, XA and HX at the modified electrode were studied by cyclic voltammetry. The results showed that this new electrochemical sensor exhibited excellent electrocatalytic activity towards the oxidation of the three analytes. The mechanism of catalysis was discussed. The anodic peaks of the three species were well defined with lowered oxidation potential and enhanced oxidation peak currents, so the modified electrode was used for simultaneous voltammetric measurement of UA, XA and HX by differential pulse voltammetry. Under the optimum conditions, the detection limits were 0.16 μmol L(-1) for UA, 0.05 μmol L(-1) for XA and 0.20 μmol L(-1) for HX, respectively (S/N of 3). The proposed method has been successfully applied to simultaneous determination of UA, XA and HX in human serum samples.     

PHOTOCHEMICAL INACTIVATION OF SINGLE-STRANDED VIRAL DNA IN THE PRESENCE OF UROCANIC ACID*

Abstract— Urocanic acid (UA) has previously been shown to react photochemically in vitro with N,N-dimethylthymine. In this study, mixtures of UA and phage G4 single-stranded DNA have been irradiated with UV light (λ≥ 254 nm) and the DNA assayed for infectivity. At the concentrations of UA employed (typically 5.4 × 10^-3 M ) there is extensive absorption of the incident light by the UA. The DNA is inactivated at rates greater than that predicted from the calculated shielding by UA, indicating that photosensitization is occurring. Photosensitization is also indicated by the fact that at high UA concentrations the inactivation rate does not decrease to zero but approaches a residual value. Furthermore, the ability to photoreactivate DNA that has been photolyzed in the presence of UA is much reduced relative to that observed upon photolysis of the DNA alone. UA is therefore responsible for the production of UV-induced DNA lesions, which are resistant to photoreactivation.
A general analysis of the effects of photosensitization on the kinetics of UV inactivation is presented in an appendix.     

Comparison of the dehalogenation of dihalomethanes (CH2XI, where X = Cl, Br, I) following ultraviolet photolysis in aqueous and NaCl saltwater environments

The ultraviolet photolysis of low concentrations of CH(2)XI (X = Cl, Br, I) were investigated in water and saltwater solutions by photochemistry and picosecond time-resolved resonance Raman spectroscopy. Photolysis in both kinds of solutions formed mostly CH(2)(OH)(2) and HI and HX products. However, photolysis of the CH(2)XI molecules in saltwater resulted in production of some CH(2)XCl products not observed in aqueous solutions without salt present. The appearance of these new products in saltwater solutions is accompanied by a decrease in the amount of CH(2)(OH)(2), HI, and HX products compared to photolysis in aqueous solutions without salt present. The possible implications for photolysis of CH(2)XI and other polyhalomethanes in seawater and other salt aqueous environments compared to nonsaltwater solvated environments is briefly discussed.     

STUDIES ON THYMINE-DERIVED UV PHOTOPRODUCTS IN DNA—I. FORMATION AND BIOLOGICAL ROLE OF PYRIMIDINE ADDUCTS IN DNA

Abstract— Pyrimidine (Pyr) adducts constitute a significant fraction of the photoproducts formed in DNA exposed to far UV light. The primary and secondary DNA structure affects the rate of Pyr adduct formation; for example, it increases with decreasing (Ade + Thy)/(Gua + Cyt) of the DNA and with increasing dehydration, and it is greater in double-stranded than in single-stranded DNA. Pyrimidine adducts do not appear to be involved in inter-strand cross-links, and 313 nm-induced photolysis of Pyr adducts does not cause strand breakage. The action spectrum for Pyr adduct formation is qualitatively similar to that for Pyr < > Pyr formation; the calculated quantum yields for its formation is essentially wavelength independent over the range 254 nm to 280 nm, but decreased somewhat at shorter wavelengths (240 nm). The biological role of Pyr adducts is still not clear. The data suggest that either Pyr adducts and their photolysis products are not lethal, or that both are lethal but can be repaired under certain conditions.     

Urea vs. thiourea in anion recognition

Neutral anion receptors (LH) form stable 1 : 1 H-bond [LH...X]- complexes with carboxylates, halides and phosphate (X-). Some of the [LH...X]- complexes, in presence of an excess of X-, release an HX fragment, with formation of [HX2]- and the deprotonated receptor L-. The tendency towards deprotonation increases with the acidity of the receptor and with the stability of the [HX2]- self-complex. Thus, the more acidic thiourea containing receptor deprotonates in the presence all the investigated anions except chloride, whereas the less acidic urea containing receptor undergoes deprotonation only in the presence of fluoride, due to the high stability of [HF2]-.     

聚咪唑/氮化碳新型纳米复合材料修饰电极对尿酸、黄嘌呤和次黄嘌呤的同时检测

以三聚氰胺为原料, 采用热聚合法合成了类石墨烯状二维片状氮化碳(g-C₃N₄)纳米材料; 通过电沉积和高电位氧化的方法制得氧化聚咪唑(PImox)/g-C₃N₄修饰电极(PImox/g-C₃N₄/GCE). 采用扫描电子显微镜(SEM)和X射线粉末衍射仪(XRD)对g-C₃N₄纳米材料进行了表征; 通过循环伏安法(CV)和差分脉冲伏安法(DPV)考察了尿酸(UA)、 黄嘌呤(XA)和次黄嘌呤(HX)在该电极上的电化学行为. 结果表明, UA, XA和HX的检测线性范围分别为2.0~216.0, 5.0~542.0和5.0~778.0 μmol/L; 检出限分别为0.17, 0.30和0.30 μmol/L. 将该修饰电极用于实际样品(血清和尿液)中UA, XA和HX的同时测定, 加标回收率为98.4%~105.2%.     

THE EFFECT OF FLUORIDE ON BINDING and PHOTODYNAMIC ACTION OF PHTHALOCYANINES WITH PROTEINS

Fluoride inhibits chloroaluminum phthalocyanine tetrasulfonate (AlPcS)-induced photohemolysis when added to dye loaded cells prior to light exposure. The mechanism by which F- exerts this effect was studied by measuring the binding of phthalocyanine (Pc) to various proteins in the absence and presence of F-. Parallel measurements were made of the photodynamic action under these conditions. Fluoride reduced the binding to proteins of AlPcS and CoPcS. The binding of CuPcS, ZnPcS and H2PcS was not affected. When bound to bovine serum albumin and exposed to light, H2Pc, ZnPc and AlPcCl were bleached at a biphasic rate. Only the photobleaching of AlPcCl was affected by F-. The effect of F- was to inhibit the initial rapid phase without affecting the slower phase. In the presence of D2O only the second phase of photobleaching was enhanced, in the absence or presence of F-. No effect of F- was observed on tryptophan photooxidation or glyceraldehyde-3-phosphate dehydrogenase photoinactivation by AlPcS. Crosslinking of spectrin monomers photosensitized by AlPcS was inhibited by F- in parallel with the reduced binding of dye to the protein. It is concluded that F- exerts its effect by complexing with metal ligands of Pc. As a result, the dye may be released from the protein or the binding mode may be changed in such a way that effective photochemistry is prevented. Primary photophysical processes of Pc most probably are not affected by F-.     

Molecular beacon probes of oligonucleotides photodamaged by psoralen

Ultraviolet A (UVA)-irradiated 4'-hydroxymethyl-4,5',8-trimethyl psoralen (HMT) in the presence of a poly-dT(17) and dA(7) TTA(8) oligonucleotides produces HMT-dT(17) and HMT-dA(7) TTA(8) adducts in aqueous solution. In this article, we determine whether these HMT-dT(17) and HMT-dA(7) TTA(8) adducts can be detected with a molecular beacon (MB) probe. We measure the degree of damage in dT(17) and dA(7) TTA(8) solutions containing UVA-activated HMT via monitoring the decrease in MB fluorescence. Photoproduct formation is confirmed by MALDI-TOF MS (matrix-assisted laser desorption/ionization time-of-fight mass spectrometry measurements) and absorption spectroscopy. The MB fluorescence decreases upon UVA irradiation in the presence of HMT with a single-exponential time constants of 114.2 ± 6.5 min for HMT-dT(17) adducts and 677.8 ± 181.8 min for HMT-dA(7) TTA(8) adducts. Our results show that fluorescent MB probes are a selective, robust and accurate tool for detecting UVA-activated HMT-induced DNA damage.     

Photodegradation pathways and the in vitro phototoxicity of pyrazinamide, a phototoxic antitubercular drug

The phototoxic antitubercular drug pyrazinamide (1) is photolabile under irradiation with UV-A light as well as with a N2 laser (at 337 nm) in aerobic conditions. Irradiation in methanolic and in aqueous solutions of 1 produces four and three photoproducts, respectively. Their formation involves primary alpha-cleavage between the excited carbonyl of the amido group and the aromatic ring followed by hydrogen abstraction and dimerization. Pyrazinamide was able to cause photohemolysis in human erythrocytes and peroxidation of linoleic acid. Inhibition of both processes on addition of reduced glutathione (GSH) or ascorbic acid suggests the involvement of radicals. The absence of inhibition of the photohemolysis and lipid peroxidation processes in the presence of sodium azide (NaN3), or irradiation under argon, and the absence of singlet oxygen during the photolysis confirmed with 2,5-dimethylfuran rules out the possibility of participation of 1O2 in this process. Glutathione depletion was also observed. A radical intermediate was evidenced by thiobarbituric acid that was used as a radical probe, as well as by the dimerization of cysteine. No photohemolysis was detected in presence of the isolated photoproduct. We have also determined the relative efficiencies for the formation of single strand breaks after the irradiation of pBR322 DNA and pyrazinamide, which was also reduced in the presence of GSH.     

Selective control of the photolysis reaction in the Ar–HX (X = F,Cl, Br) clusters through the initial distribution of intracluster orientations

The bound state spectrum of the Ar–HX (X = F, Cl, Br) van der Waals (vdW) clusters is investigated. The yield and final state distribution of the ultraviolet photolysis reaction in these clusters is largely affected by the shape of the intracluster orientation distribution initially prepared. Thus, the change of this shape with excitation of the different cluster modes is analyzed. Angular distributions associated either with the Ar–H–X or the Ar–X–H isomer geometries, and with shapes in between these two limiting cases, are found. We conclude that a wide range of cluster angular geometry distributions can be initially prepared, allowing a high degree of selective control on the Ar–HX photolysis reaction products.     

聚(3-氨基-5-巯基-1,2,4-三唑)/多壁碳纳米管修饰的玻碳电极同时检测尿酸、黄嘌呤与次黄嘌呤

采用滴涂法得到多壁碳纳米管(MWCNTs)修饰的玻碳电极(GCE),通过电沉积方法将3-氨基-5-巯基-1,2,4-三唑(TA)沉积在MWCNTs/GCE表面,制备了聚(3-氨基-5-巯基-1,2,4-三唑)/多壁碳纳米管修饰电极(p TA/MWCNTs/GCE)。采用循环伏安法(CV)和示差脉冲伏安法(DPV),研究了尿酸(UA)、黄嘌呤(XA)和次黄嘌呤(HX)在该修饰电极上的电化学行为。结果表明,该修饰电极对UA、XA和HX均有较好的电催化活性作用,能实现对3种物质的同时测定。UA、XA和HX在该修饰电极上的线性范围分别为9.0~739.0、2.0~259.0、1.0~353.0μmol/L;检出限分别为0.67、0.17、0.33μmol/L。该修饰电极已成功用于尿液和血清实际样品中UA、XA和HX的同时测定,回收率为98.8%~105.5%。