卤键的AIM研究

本文利用分子中的原子理论对一系列含卤分子与氨之间形成的卤键进行了分析，内容包括键关键点的确定、关键点的电子密度和拉普拉斯量以及复合物形成前后的若干原子性质，如电荷、能量、极化矩、卤键供体原子体积等的变化。结果显示：（1）所有卤键复合物中均存在一键关键点，其作用属于闭壳型相互作用；（2）卤键复合物键关键点的电子密度及其拉普拉斯量与卤键的强度间存在很好的线性关系；（3）键关键点电子密度的对数与卤键的距离d(X···N)高度相关。这一研究有望对卤键的本质提供进一步的认识。     

卤键在超分子化学中的应用进展

卤键是指作用在卤原子(路易斯酸)和具有孤对电子的原子或π电子体系(路易斯碱)之间的新型弱相互作用,其在超分子多维自组装和分子识别(如超分子催化、超分子选择拆分、超分子传感)等领域有着广泛的应用。本文介绍了卤键的类别、特性、功能及在超分子化学结构与功能领域中的应用。     

碱金属双原子分子的键电子与键能的关系

本文通过量子化学从头计算了，对碱金属双原子分子的成键情况进行了研究，并对它们的异常现象提出了一种较为合理的解释。     

基于分子间卤键的超分子平面大环自组装

本工作报道了含卤键供体和受体片段的三种芳酰胺分子(化合物1~3)的设计和合成, 并对固相中卤键的不同作用模式进行了探索和分析. 化合物1的晶体数据显示, 由于没有分子内氢键, 组成分子的三个芳环相互扭转一定角度, 并且在分子间交替排列的N···I和O···I卤键的控制下, 组装成了一条线型的超分子组装体. 由于酰胺羰基和两个紧邻的氟原子之间的排斥作用, 化合物2未能形成分子内三中心氢键. 在此基础上, 将三氟碘代苯作为卤键供体片段引入到化合物3中, 并且在折叠体骨架中嵌入了嘧啶单元. 化合物3的晶体数据显示, 基于多组有效的分子内三中心氢键和分子间较强的卤键作用, 双分子间形成了[1+1]的超分子大环. 另外, 由于嘧啶环的引入, 使得该超分子大环接近共平面.     

极性分子键角与键偶极矩的关系

研究了基态极性分子的键角和键偶极矩之间的关系。我们采用原子偶极矩校正的Hirshfeld （ADCH）电荷来计算键偶极矩,利用电子的局域函数和键临界点处的局域函数值来分析键的电子结构。通过对IVA族（IVA = C,Si,Ge）、VA族（VA = N,P,As ）、VIA族（VIA = O,S,Se）和VIIA族（VIIA = F,Cl,Br）元素形成的系列共价型基态分子,以及环状基态分子的键角和键偶极矩数据进行分析,发现在键的电子结构类似的情况下,由于键偶极矩的排斥作用,这些分子的键角随键偶极矩的增加而增大。这一发现有助于加深我们对分子几何结构的认识。     

光敏离子载体——一类功能性超分子光化学体系

简要介绍了光敏离子载体——一类可用于识别、检测、运输和释放金属离子的超分子光化学体系的工作原理及其在生物、化学等方面的广泛应用     

卤键在化学传感和分子识别中的应用

卤键是一种新的分子间非共价作用力,它存在于卤素原子(路易斯酸)和具有孤电子对的原子或π-电子体系(路易斯碱)之间,在超分子化学、材料科学、生物识别和药物设计等领域已经显示出独特的优势。本文主要从卤键的特征和在化学传感和分子识别中的应用以及发展前景等几方面进行了介绍,期望引起人们对卤键的更多关注。     

一维超分子体系的研究进展

超分子化学是一个新兴领域,但现今对形成超分子体系所需要的超分子非共价键作用力的理解还不是很全面。文章介绍了几个典型的通过金属配位作用、氢键、π-π堆积、疏水作用和多个非共价键共同作用等自组装的一维超分子体系,以期为超分子的设计提供理论依据。     

超分子体系中醌类光还原的研究

本文报道了9，10－蒽醌－2－磺酸（AQS）在（β－CD）和甲基化β－CD超分子体系中的光还原反应。即使在无氢原子给予体（HAD）和不除氧的实验条件下，CD的加入都能导致光还原反应速度剧增。机理研究表明此现象主要由CD的微环境引起，依赖于第二客体甲醇的浓度。甲醇既可与AQS－CD形成三元包络物，又能导致AQS从包络物中挤出。     

具有分子机器、分子开关功能的自组装超分子体系

本文介绍了具有分子梭或分子开关性质的新型轮烷和索烃超分子以及具有分子机器功能的其它类型化学和生物分子的国际研究最新动态。     

Computational study of formamide–water complexes using the SAPT and AIM methods

In this work, the complexes formed between formamide and water were studied by means of the SAPT and AIM methods. Complexation leads to significant alterations in the geometries and electronic structure of formamide. Intermolecular interactions in the complexes are intense, especially in the cases where the solvent interacts with the carbonyl and amide groups simultaneously. In the transition states, the interaction between the water molecule and the lone pair on the amide nitrogen is also important. In all the complexes studied herein, the electrostatic interactions between formamide and water are the main attractive force, and their contribution may be five times as large as the corresponding contribution from dispersion, and twice as large as the contribution from induction. However, an increase in the resonance of planar formamide with the successive addition of water molecules may suggest that the hydrogen bonds taking place between formamide and water have some covalent character.     

基于多重氢键的超分子液晶研究

基于氢键的超分子液晶体系的研究是一个方兴未艾的充满活力的前沿研究领域,它在化学和生物体系中占据非常重要的位置。本文主要介绍了目前文献报道的基于二重以上氢键的超分子液晶体系的研究进展。     

Reinvestigation of intramolecular hydrogen bond in malonaldehyde derivatives: An ab initio,AIM and NBO study

The RAHB systems in malonaldehyde and its derivatives at MP2/ 6‐311++G(d,p) level of theory were studied and their intramolecular hydrogen bond energies by using the related rotamers method was obtained. The topological properties of electron density distribution in O? H···O intramolecular hydrogen bond have been analyzed in term of quantum theory of atoms in molecules (QTAIM). Correlations between the H‐bond strength and topological parameters are probed. The results of QTAIM clearly showed that the linear correlation between the electron density distribution at HB critical point and RAHB ring critical point with the corresponding hydrogen bond energies was obtained. Moreover, it was found a linear correlation between the electronic potential energy density, V(r_cp), and hydrogen bond energy which can be used as a simple equation for evaluation of HB energy in complex RAHB systems. Finally, the similar linear treatment between the geometrical parameters, such as O···O or O? H distance, and Lp(O)→σ*_OH charge transfer energy with the intramolecular hydrogen bond energy is observed. © 2010 Wiley Periodicals, Inc., Int J Quantum Chem, 2011     

药物输送体系构筑中的超分子组装策略

超分子组装提供了药物输送体系设计的新原理。以高效的分子间非共价键作用为驱动力,超分子药物输送体系能够利用结构简单的分子单体获得精确的成分控制,并使得载体结构易于预测,形貌与体积易于调控,有利于实现药物的控制释放。本文首先总结超分子药物输送体系的研究背景,之后重点介绍基于环糊精、杯芳烃、柱芳烃和葫芦脲的主-客体体系的超分子药物输送体系的构建与药物输送功能,然后介绍水溶性的超分子有机框架在药物输送方面的应用,最后提出了超分子药物载体实用化需要克服的若干挑战性问题。     

三聚氰胺和对苯二氧乙酸共晶中的三维氢键网络

合成了一个新的超分子聚合物{(MAH+)2(p-BDOA2-)·4H2O}n(MA=三聚氰胺;p-BDOAH2=对苯二氧乙酸),通过X-射线对其结构进行了表征。在该聚合物中,三聚氰胺被质子化,相邻的三聚氰胺分子通过氢键形成一维阳离子链(MAH+)n,相邻的阳离子链由p-BDOA2-阴离子连接构成波浪状的二维层,层状结构通过水分子的氢键和π-π堆积形成三维结构。     

AIM study of pyrimidyl carbocyclic analogues of nucleosides based on cyclopentene rings

A topological charge electron density analysis using the atoms in molecules (AIM) theory with HF/6‐31++G**// HF/6‐31G* wave functions was performed on cis‐pyrimidyl and cis‐5/6‐halopyrimidyl derivatives of 1,2‐disubstituted analogues of carbocyclic nucleosides. In these analogues, which belong to an important class of antiviral or antitumoral compounds, the usual ribose or deoxyribose is replaced by a carbocycle with a hydroxymethyl group and a heterocyclic base on adjacent carbons and a double bond between positions 2 and 3 of the carbocycle. The results obtained demonstrate that 5‐halogenation does not alter the relative energy sequence of the conformers and gives rise to no meaningful distortion of the electron distribution in the cyclopentene ring. In fact, the difference in the total electron population of this cycle between the parent and any of the halogenated molecules is never larger than 7×10^?3 a.u. It has been found that the electron population of the αC atom in the chloro derivatives is enlarged with respect to the unhalogenated species. The 5‐halogenation results in a destabilization of the C4, C5, and C6 atoms of the heterocyclic base. According to the AIM computed energy properties this destabilization originates from larger interelectronic repulsions in the C5 basin that are consistent with its reduced volume and its lower first moment of the electron density. On the other hand, 6‐halogenation produces a significant modification of the conformational equilibrium, modifying the relative energy sequence of conformers. The electronic properties are also significantly modified by 6‐halogenation. The charge transfer from the cyclopentene ring to the base reaches 0.71 a.u. in the 6‐fluoro derivative and 0.69 a.u. in the 6‐chloro derivative. © 2002 John Wiley & Sons, Inc. Int J Quantum Chem 86: 67–78, 2002     

Halogen Bonding： An AIM Analysis of the Weak Interactions

A series of complexes formed between halogen-containing molecules and ammonia have been investigated by means of the atoms in molecules （AIM） approach to gain a deeper insight into halogen bonding. The existence of the halogen bond critical points （XBCP） and the values of the electron density （Pb） and Laplacian of electron density （V2pb） at the XBCP reveal the closed-shell interactions in these complexes. Integrated atomic properties such as charge, energy, polarization moment, volume of the halogen bond donor atoms, and the corresponding changes （△） upon complexation have been calculated. The present calculations have demonstrated that the halogen bond represents different AIM properties as compared to the well-documented hydrogen bond. Both the electron density and the Laplacian of electron density at the XBCP have been shown to correlate well with the interaction energy, which indicates that the topological parameters at the XBCP can be treated as a good measure of the halogen bond strength In addition, an excellent linear relationship between the interatomic distance d（X…N） and the logarithm of Pb has been established.     

β‐Aminoacrolein: An ab initio,AIM and NBO study

The molecular structure and the intramolecular hydrogen bonding of β‐aminoacrolein and its simple derivatives were investigated at the MP2 and B3LYP levels of theory using the standard 6‐311++G(d, p) basis set. The “atoms in molecules” or AIM theory of Bader which is based on topological properties of the electron density (ρ), was used. Additionally, an analysis of the critical points was performed to study the nature hydrogen bonding in these systems. Natural bond orbital (NBO) analysis was also carried out for to better comprehend the nature of the intramolecular interactions in β‐aminoacrolein and its derivatives. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2008     

乙醛二聚体内蓝移型氢键的理论研究

利用理论方法研究了乙醛二聚体内的氢键. 在MP2/6-31＋G(d), B3LYP/6-31＋G(d), B3LYP/6-311＋＋G(d,p)和B3LYP/6-311＋＋G(3df,2p)水平上, 利用常规方法和均衡校正方法对3种稳定的乙醛二聚体进行了几何优化和振动频率计算. 计算结果表明: 在二聚体A和C中乙醛中C—H键强烈收缩, 存在显著的C—H…O蓝移型氢键. 自然键轨道(NBO)分析表明, 电子供体轨道和电子受体轨道之间相互作用的稳定化能、分子内电子密度重排、轨道再杂化和结构重组是决定氢键红移和蓝移的主要因素. 其中, 轨道间稳定化能属于键伸长效应, 分子内电子密度重排、轨道再杂化和电子受体内部结构重组属于键收缩效应. 在二聚体A和C中, 由于键收缩效应处于优势地位导致C—H…O蓝移氢键存在.     

折叠物的超分子行为研究进展

综述了近年来折叠物的超分子行为研究,主要介绍它们在分子识别和组装方面的最新研究进展。参考文献31篇。