Hydrogen-bond interaction in organic conductors: redox activation, molecular recognition, structural regulation, and proton transfer in donor-acceptor charge-transfer complexes of TTF-imidazole

Hydrogen-bond interaction in donor-acceptor charge-transfer complexes of TTF-imidazole demonstrated the electronic effects in terms of control of component ratio and redox activation. These unprecedented effects of hydrogen bonds renewed the criteria giving "a high probability of being organic metals" and produced a number of highly conductive complexes with various acceptors having a wide range of electron-accepting ability. In p-chloranil complex, both molecules were linked by hydrogen bonds and formed a D-A-D triad, regulating the donor-acceptor composition to be 2:1. Theoretical calculations have revealed that the polarizability of hydrogen bonds controls the redox ability of the donor and p-benzoquinone-type acceptors and afforded different ionicity in complexes from those expected by the difference of redox potentials between donor and acceptors. In the p-chloranil complex, this electronic and structural regulation by hydrogen bond realized the first metallic donor-acceptor charge-transfer complex based on hydrogen bond functionalized TTF. Hydrogen bonds controlled also molecular arrangements in charge-transfer complexes, giving diverse and highly ordered assembled structures, D-A-D triad in the p-chloranil complex, one-dimensional zigzag chain in I(5) salt, alternating donor-acceptor chain in chloranilic acid complex, and D-A-D-A cyclic tetramer in nitranilic acid complex. Furthermore, TTF-imidazole acted as electron donor as well as proton acceptor in anilic acid complexes and realized the simultaneous charge- and proton-transfer complexes. These investigations demonstrated the new and intriguing potentials of the hydrogen bond in the development of organic conductors and multifunctional molecular materials.     

Selective Activation of Aromatic Aldehydes Promoted by Dispersion Interactions: Steric and Electronic Factors of a π-Pocket within Cage-Shaped Borates for Molecular Recognition

Selective bond formations are one of the most important reactions in organic synthesis. In the Lewis acid mediated electrophile reactions of carbonyls, the selective formation of a carbonyl–acid complex plays a critical role in determining selectivity, which is based on the difference in the coordinative interaction between the carbonyl and Lewis acid center. Although this strategy has attained progress in selective bond formations, the discrimination between similarly sized aromatic and aliphatic carbonyls that have no functional anchors to strongly interact with the metal center still remains a challenging issue. Herein, this work focuses on molecular recognition driven by dispersion interactions within some aromatic moieties. A Lewis acid catalyst with a π-space cavity, which is referred to as a π-pocket, as the recognition site for aromatic carbonyls is designed. Cage-shaped borates 1 B with various π-pockets demonstrated significant chemoselectivity for aromatic aldehydes 3 b – f over that of aliphatic 3 a in competitive hetero-Diels–Alder reactions. The effectiveness of our catalysts was also evidenced by intramolecular recognition of the aromatic carbonyl within a dicarbonyl substrate. Mechanistic and theoretical studies demonstrated that the selective activation of aromatic substrates was driven by the preorganization step with a larger dispersion interaction, rather than the rate-determining step of the C−C bond formation, and this was likely to contribute to the preferred activation of aromatic substrates over that of aliphatic ones.     

Computational insights into the acceptor chemistry of phosphenium cations

Phosphines are traditionally considered as Lewis bases or ligands in transition metal and main group complexes. Despite their electron-rich (lone pair-bearing) nature, an extensive coordination chemistry for Lewis acidic phosphorus centers is being developed; such chemistry provides a new synthetic approach for phosphorus-element bond formation, leading to new types of structures and modes of bonding. Complexes of Ph2P+ with a variety of donor elements (P, N, C) give experimentally short donor-acceptor bond lengths, when compared to other cationic phosphorus Lewis acid complexes. We have calculated that the energy of the lowest unoccupied molecular orbital (LUMO) in Ph2P+ is lower than that of (Me2N)2P+, which partially explains the greater exothermicity of reactions of donors with the diaryl acceptor. Furthermore, the energies required to distort the diphenylphosphenium cation from its ground-state geometry are significantly smaller than those of the diamido cations and, thus, enhance the exothermicity of donor coordination. These computational data, in conjunction with evidence from experimental solid-state structures, indicate that Ph2P+ is a significantly better Lewis acid relative to the more common diaminophosphenium analogues (R2N)2P+ and are used to elucidate the nature of the bonding in donor-phosphenium complexes.     

Collision-energy-resolved Penning ionization electron spectroscopy of thiazole and benzothiazole: study of ionic states and anisotropic interactions between a metastable He(23S) atom and hetero cyclic compounds

Anisotropic interactions between a metastable He(2(3)S) atom and aromatic heterocyclic compounds (thiazole and benzothiazole) as well as their electronic structures were studied by means of collision-energy/electron-energy resolved two-dimensional Penning ionization electron spectroscopy combined with ab initio molecular orbital calculations. Different collision-energy dependence of partial ionization cross sections (CEDPICS) were clearly observed for different ionic states depending on anisotropic extents of molecular orbitals from which an electron is removed. It was found that thiazole and benzothiazole most strongly attract a He(2(3)S) atom around the region where the nitrogen lone pair orbital extends. For another heteroatom, sulfur, it is relatively weak, but a certain attractive interaction was found for the directions perpendicular to the molecular plane. Benzothiazole was shown to widely attract a He(2(3)S) atom in the out-of-plane directions, since the benzene moiety showed a deeper potential well than the five-membered ring. Assignments of the ionic states including shake-up states were also discussed from observed CEDPICS and ab initio molecular orbital calculations. In particular, for the satellite bands, a negative collision energy dependence of the band intensity was well supported by a configuration-interaction calculation that assigns the satellite bands to be the ionization from pi orbitals accompanying pi-pi or n-pi excitations.     

Molecular complexes of ketaconazole and oxatomide with p-chloranil: spectroscopic and spectrofluorimetric studies

The molecular complexes of the donors ketaconazole (KTZ) and oxatomide (OXA) drugs with 2,3,5,6-tetrachloro-1,4-benzoquinone (p-chloranil, p-CHL) have been investigated spectroscopically (UV-vis, FT-IR and 1H NMR) and spectrofluorimetrically in different solvents and temperatures. The stoichiometry of the complexes was found to be 1:1. The data are discussed in terms of formation constant, molar extinction coefficient, oscillator strength, dipole moment, ionization potential, dissociation energy and thermodynamic parameters. The results indicated that the formation of molecular complex is spontaneous and endothermic. The fluorescence quenching studies indicated that the interaction of the donors is spontaneous and the fluorescence quenching increased with an increase in the intensity of complexation with the acceptor.     

The effects of biological environments on the electron-relay functionality of tryptophan residues in proteins

Clarifying the contribution of tryptophan (Trp) to electron-transfer (ET) processes in different protein surroundings can help to understand the effective pathway of ET in proteins. Interactions between Trp residues and protein microsurroundings involve intermolecular H-bonds, cation and π-electron clouds of aromatic rings, the secondary structure and π orbital of aromatic rings, and so on. Detailed analyses reveal that the microsurroundings play an important role in modulating the electron-relay function of Trp in proteins. Generally, microsurroundings with strong Lewis acidity inhibit electron hole transport through Trp residues. Systems with weak Lewis acidity finely tune the electron-relay ability of Trp in proteins, while those with strong Lewis basicity strongly enhance the electron-relay ability of Trp residues.     

Orbital views of the electron transport through heterocyclic aromatic hydrocarbons

Electron-transport properties of heterocyclic aromatic hydrocarbons are investigated with theoretical methods. The present study is based on a previously derived concept for orbital control of electron transport through aromatic hydrocarbons. The orbital control concept provided crucial basic understanding for the best conductance channels in the aromatic hydrocarbons and was successfully applied in the design of molecular devices. That concept was proven to hold true for small aromatic molecules, large polycyclic aromatic hydrocarbons with different edge structures, and in weak and strong coupling with the electrodes junctions. The polycyclic aromatic hydrocarbons and nanographenes used in the molecular electronics are often immobilized with different types of defects, which require the application of the orbital control concept on heterocyclic aromatic hydrocarbons. In this work, the effect of the heteroatoms in aromatic hydrocarbons on their electron-transport properties and the applicability of the orbital control concept on heterocyclic aromatic hydrocarbons are studied. Effective routes for electron transport are predicted in weak coupling junctions by analyzing the phase and amplitude of the frontier orbitals. The qualitative predictions are made with the nonequilibrium Green??s function method combined with the Hückel approximation. Quantitative, first principle calculations are performed with the nonequilibrium Green??s function method combined with density functional theory. The obtained results are in good agreement with the expectations on the basis of the orbital control concept, which proves its applicability in heterocyclic aromatic hydrocarbons.     

EFFECT OF pH ON THE ADSORPTION OF p-AMINOBENZOIC ACID ON POLYSTYRENE-BASED ADSORBENTS

In the present study the adsorptive properties of p-aminobenzoic acid with hypercrosslinked and multi-functional polymeric adsorbents at different solution pHs were systematically investigated in accordance with the particular physicochemical characteristics of the aromatic amphoteric compound involving both Lewis acid and Lewis base functional groups. It was found that the equilibrium adsorption data of the three polymeric adsorbents fitted well in the Langmuir and Freundlich isotherm equations. Studies at various pH levels indicate that the capacity of the adsorbents for adsorption of the ionic forms of adsorbate is less than that for the corresponding neutral species. At pH 3.78, the adsorption capacities of the three adsorbents are the highest. Whereas the adsorption property of multi-functional polymeric adsorbent NJ-99 is the largest, which may be attributed to the strong hydrogen-bonding interaction between the amino groups on the resin and the carboxyl group of p-aminobenzoic acid. The trend of the adsorption capacities of the three adsorbents towards p-aminobenzoic acid with the solution pH is in accord with the dissociation curve of the neutral molecular p-aminobenzoic acid. The adsorption forces include π-π interaction, hydrogen-bonding interaction and electrostatic attraction or repulsion when there exist the molecular and ionic adsorbing species at different pHs in aqueous solution.     

Quantitative study of the structural requirements of phthalazine/quinazoline derivatives for interaction with human liver aldehyde oxidase

Aldehyde oxidase is a molybdenum-containing enzyme distributed throughout the animal kingdom. Although this enzyme is capable of metabolizing a wide range of aldehydes and N-heterocyclic compounds, there is no reported detailed study of physicochemical requirements of the enzyme-substrate interactions. The aim of this study, therefore, was to investigate quantitatively the relationships between the kinetic constants of aldehyde oxidase-catalyzed oxidation of some phthalazine and quinazoline derivatives (as substrates) and their structural parameters. Multiple regression and stepwise regression analyses showed that polarity of phthalazines (expressed as dipole moment mu, cohesive energy density deltaT and an indicator variable for hydrogen-bond acceptor ability of R1 substituent, HBA) had a negative effect on the enzyme activity (leading to the reduction of Vmax and increase of Km). Electron withdrawing substituents in the quinazoline series are favorable for interaction with the enzyme. This finding and also the relationships of 1/Km of phthalazines with the energy of the lowest unoccupied molecular orbital and log Vmax/log Km of phthalazines with degree of bonding of the two nitrogen atoms in the molecules are consistent with the mechanism of action. The reaction involves a nucleophilic attack on an electron-deficient sp2-hybridized carbon atom and formation of an epoxide intermediate following the disruption of the aromatic structure.     

Structural investigations on lewis acid mediated solubilization of poly(p-phenylenebenzobisthiazole) in an aprotic solvent

Investigations on aluminum chloride-mediated solubilization of poly(p-phenylenebenzo-bisthiazole), PBZT, in nitromethane revealed that, in general, dilute solutions of the polymer prepared in nitromethane with a large molar excess of the Lewis acid with respect to PBZT were relatively stable and thus suitable for processing into films and coatings via regeneration with hydroxylic nosolvents while polymer solutions with minimum stoichiometrically required (PBZT:AlCl₃ molar ratio 1:4) or marginal molar excess of AlCl₃ relative to PBZT tended to gel during handling. Structural studies on polymer–Lewis acid complex solutions were performed using ¹H and ²⁷Al NMR. ¹H NMR of the protonated structure of the model compound 2,6-diphenylbenzo [1,2-d:4,5-d′] bisthiazole was useful for confirming the ¹H NMR assignments of PBZT-AlCl₃ complex solution in CD₃NO₂. ²⁷Al NMR was particularly useful in probing the different tetrahedrally coordinated environments of the Al nucleus in the polymer solution, pointing to a complexation interaction between the polymer molecule and the Lewis acid and also between the solvent and the Lewis acid. Direct evidence in the solid state for the presence of a reversible electron donor–acceptor complex (EDA complex) was obtained from FTIR spectra of complexed films, isolated and handled in an inert atmosphere. The structural changes upon PBZT complexation caused significant frequencly shifts in both aromatic as well as heteroring stretching modes relative to PBZT itself, and intensity variations indicative of changes in the resonance configuration between the 1,4-phenylene moiety and the aromatic heterocyclic ring were also observed upon complexation. A preliminary comparison between the pristine PBZT fibers and regenerated PBZT by dilute solution viscometry indicates that the process results, to some extent, in polymer degradation leading to a decrease in the molecular weight of the polymer © 1993 John Wiley & Sons, Inc.     

Stability and electrophilicity of phosphorus analogues of arduengo carbenes--an experimental and computational study

A variety of differently substituted 1,3,2-diazaphospholenium salts and P-halogeno-1,3,2-diazaphospholenes (X = F, Cl, Br) were synthesized, and their molecular structures, bonding situation, and Lewis acid properties were characterized by experimental (single-crystal X-ray diffraction, NMR and IR/Raman spectroscopy, MS, conductometry, titrations with Lewis bases) and computational methods. Both experimental and computational investigations confirmed that the structure and bonding in the diazaphospholenium cations of OTf and BF4 salts resembles that of neutral Arduengo carbenes and that the cations should not be described as genuinely aromatic. P-Halogenodiazaphospholenes are, in contrast to earlier assumptions, molecular species with covalent P-X bonds whose bonding situation can be expressed in terms of hyperconjugation between the six pi electrons in the C2N2 unit and the sigma*(P-X) orbital. This interaction induces a weakening of the P-X bonds, whose extent depends subtly on substituent influences and contributes fundamentally to the amazing structural similarity of ionic and covalent diazaphospholene compounds. A further consequence of this effect is the unique polarizability of the P-Cl bonds in P-chlorodiazaphospholenes, which is documented in a considerable spread of P-X distances and bond orders. Measurement of the stability constants for complexes of diazaphospholene compounds with Lewis bases confirmed the lower Lewis acidities and higher stabilities of diazaphospholenium ions as compared with nonconjugated phosphenium ions; this had been inferred from computed energies of isodesmotic halide-transfer reactions, and permitted also to determine equilibrium constants for P-Cl bond dissociation reactions. The results suggest, in accord with conductance measurements, that P-chlorodiazaphospholenes dissociate in solution only to a small extent. On the basis of these findings, the unique solvatochromatic behavior of NMR chemical shifts of these compounds was attributed to solvent-dependent P-Cl bond polarization rather than to shifts in dissociation equilibria.     

Synthesis of Functionalized Tetrahydropyridines by SnCl4-Mediated [4+2] Cycloaddition between Donor–Acceptor Cyclobutanes and Nitriles

Cycloadditions of strained carbocycles promoted by Lewis acids are powerful methods to construct heterocyclic frameworks. In fact, the formal [3+2] cycloadditions of donor–acceptor (DA) cyclopropanes with nitriles has seen particular success in synthesis. In this work, we report on the first [4+2] cycloaddition of nitriles with DA cyclobutanes by Lewis acid activation. Tetrahydropyridine derivatives were obtained in up to 91 % yield from various aryl-activated cyclobutane diesters and aliphatic or aromatic nitriles.     

How Alkali Cations Catalyze Aromatic Diels‐Alder Reactions

We have quantum chemically studied alkali cation‐catalyzed aromatic Diels‐Alder reactions between benzene and acetylene forming barrelene using relativistic, dispersion‐corrected density functional theory. The alkali cation‐catalyzed aromatic Diels‐Alder reactions are accelerated by up to 5 orders of magnitude relative to the uncatalyzed reaction and the reaction barrier increases along the series Li⁺ < Na⁺ < K⁺ < Rb⁺ < Cs⁺ < none. Our detailed activation strain and molecular‐orbital bonding analyses reveal that the alkali cations lower the aromatic Diels‐Alder reaction barrier by reducing the Pauli repulsion between the closed‐shell filled orbitals of the dienophile and the aromatic diene. We argue that such Pauli mechanism behind Lewis‐acid catalysis is a more general phenomenon. Also, our results may be of direct importance for a more complete understanding of the network of competing mechanisms towards the formation of polycyclic aromatic hydrocarbons (PAHs) in an astrochemical context.     

芳香胺氰乙基化催化反应的研究进展

从催化剂的应用角度,总结了酸、路易斯酸、固体酸性氧化物、强酸性阳离子交换树脂、无机碱、有机碱以及由酸/路易斯酸、路易斯酸/路易斯酸、路易斯酸/路易斯碱等催化体系在催化芳香胺的氰乙基化反应中的应用进展,阐述了芳香胺的氰乙基化反应的酸催化和碱催化机理,并对芳香胺的氰乙基化反应的今后发展方向进行了展望。     

IR spectroscopy of hydrogen-bonded 2-fluoropyridine-methanol clusters

The electronic and infrared spectra of 2-fluoropyridine-methanol clusters were observed in a supersonic free jet. The structure of hydrogen-bonded clusters of 2-fluoropyridine with methanol was studied on the basis of the molecular orbital calculations. The IR spectra of 2-fluoropyridine-(CH3OH)n(n = 1-3) clusters were observed with a fluorescence-detected infrared depletion (FDIR) technique in the OH and CH stretching vibrational regions. The structures of the clusters are similar to those observed for 2-fluoropyridine-(H2O)n (n = 1-3) clusters. The existence of weak hydrogen bond interaction through aromatic hydrogen was observed in the IR spectra. The theoretical calculation also supports the result. The vibrational frequencies of CH bonds in CH3 group are affected by hydrogen bond formation although these bonds do not directly relate to the hydrogen bond interaction. The B3LYP/6-311 ++G(d,p) calculations reproduce well the vibrational frequency of the hydrogen-bonded OH stretching vibrations. However, the calculated frequency of CH stretching vibration could not reproduce the IR spectra because of anharmonic interaction with closely lying overtone or combination bands for nu3 and nu9 vibrations. The vibrational shift of nu2 vibration is reproduced well with molecular orbital calculations. The calculation also shows that the frequency shift of nu2 vibration is closely related to the CH bond length at the trans position against the OH bond in hydrogen-bonded methanol.     

Selective and Reversible Fluoride Complexation from Water by a Cyclic Tri(phosphonio)methanide Dication

Tri(phosphonio)methanide dication 3 ²⁺, prepared from a trifluoromethylsulfanylphosphonium dication ( 1 ²⁺) via an intramolecular electrophilic aromatic substitution reaction, is an unexpected P‐based, water‐resistant Lewis acid that is capable to selectively and reversibly bind fluoride ions from organic/aqueous biphasic solution. The formed complex is an unusual fluorophosphorane ( [3‐F] OTf). The multiple donor–acceptor interactions of 3 ²⁺ that are crucial for the fluoride fixation have been elucidated by quantum chemical calculation. Compound [3‐F] OTf can also be used as a convenient anhydrous fluoride ion source and was probed as a suitable catalyst of the silylotrifluoromethylation of various aldehydes.     

The role of weak hydrogen-bonds on the formation of short-lived molecular associations

Weak molecular homo- and hetero-associations among some ethene derivatives and several common solvents are studied using (1)H NMR spectroscopy. In connection with the aromatic-solvent induced shifts which is a special case of molecular association between aromatic solvents and polar molecules a model for association was suggested that involves the interaction of the positive end of the solute dipole with the aromatic pi-electrons. This model met with certain difficulties. An alternative model for configuration of associated molecules that explains the literature results and the results obtained in this paper is presented. The model is based on interaction of protons of the acceptor molecules with the lone-pair electrons or pi-electrons of the donor molecules. The present model removes the difficulties met with the former model and extends the concept of aromatic-solvent induced shifts to include non-polar molecules besides polar ones. In all cases, the interaction of protons of acceptor molecules with lone-pair electrons of donor molecules gives rise to a deshielding effect, while interaction with aromatic pi-electrons leads to shielding.     

Orbital deletion procedure and its applications

The orbital deletion procedure is introduced, which is suited to quantitatively investigating the electronic delocalization effiect in earboeations and boranes. While the routine, ab initio molecular orbital methods can generate wavefunetions for real systems where all electrons are delocalized, the present orbital deletion procedure can generate wavefunctions for hypothetical reference molecules where electronic delocalization effect is deactivated. The latter wavefunetion normlly corresponds In the most stable resonance structure in terms of the resonance theory. By comparing and analyzing the delocalized and the localized wavefunetions, one can obtain a quantitative and instinct pieture to show how electronic deloealizalion inside a molecule affects the molecular structure, energy as well as other physical properties. Two examples are detailedly discussed. The first is related to the hypercoujugation of alkyl groups in carbocations and a comparison of the order of stability of carbocations is made, T     

卤键在超分子化学中的应用进展

卤键是指作用在卤原子(路易斯酸)和具有孤对电子的原子或π电子体系(路易斯碱)之间的新型弱相互作用,其在超分子多维自组装和分子识别(如超分子催化、超分子选择拆分、超分子传感)等领域有着广泛的应用。本文介绍了卤键的类别、特性、功能及在超分子化学结构与功能领域中的应用。     

Conceptual Quantum Chemical Analysis of Bonding and Noncovalent Interactions in the Formation of Frustrated Lewis Pairs

The contributions of covalent and noncovalent interactions to the formation of classical adducts of bulky Lewis acids and bases and frustrated Lewis pairs (FLPs) were scrutinized by using various conceptual quantum chemical techniques. Significantly negative complexation energies were calculated for fourteen investigated Lewis pairs containing bases and acids with substituents of various sizes. A Ziegler–Rauk‐type energy decomposition analysis confirmed that two types of Lewis pairs can be distinguished on the basis of the nature of the primary interactions between reactants; dative‐bond formation and concomitant charge transfer from the Lewis base to the acid is the dominant and most stabilizing factor in the formation of Lewis acid–base adducts, whereas weak interactions are the main thermodynamic driving force (>50 %) for FLPs. Moreover, the ease and extent of structural deformation of the monomers appears to be a key component in the formation of the former type of Lewis pairs. A Natural Orbital for Chemical Valence (NOCV) analysis, which was used to visualize and quantify the charge transfer between the base and the acid, clearly showed the importance and lack of this type of interaction for adducts and FLPs, respectively. The Noncovalent Interaction (NCI) method revealed several kinds of weak interactions between the acid and base components, such as dispersion, π–π stacking, C?H ??? π interaction, weak hydrogen bonding, halogen bonding, and weak acid–base interactions, whereas the Quantum Theory of Atoms in Molecules (QTAIM) provided further conceptual insight into strong acid–base interactions.