Characterizing wood polymers in the primary cell wall of Norway spruce (<Emphasis Type="Italic">Picea abies</Emphasis> (L.) Karst.) using dynamic FT-IR spectroscopy

Dynamic Fourier Transform Infra-Red (FT-IR) spectroscopy was used to examine the interactions among cellulose, xyloglucan, pectin, protein and lignin in the outer fibre wall layers of spruce wood tracheids. Knowledge regarding these interactions is fundamental for understanding the fibre separation in a mechanical pulping process. Sheets made from an enriched primary cell wall material were used for studying the viscoelastic response of the polymers. The results indicated that strong interactions exist among lignin, protein, pectin, xyloglucan and cellulose in the primary cell wall. This signified a closely linked network structure of the components on the fibre surface. This ultrastructural arrangement in the primary cell wall and the relatively high content of lignin, pectin and protein in it, means that the primary cell wall is more submissive to selective chemical attacks, when compared to the secondary cell wall. A low ratio of cellulose Iα to cellulose Iβ in the primary cell wall was also found.     

A native cellulose microfibril model

To aid in the understanding of cellulose ultrastructure, computer modelling has been employed to create a model of monoclinic (I) native cellulose. This was achieved by building a chain of cellulose, which was used in a two chain unit cell. An energy minimized microfibril model was created from several of these unit cells. A major advantage of this model is that it is a large scale unconstrained, isolated system. Thus, it facilitates the study of surface as well as central chains and provides a working model of a cellulose microfibril. An extensive analysis was carried out of intermolecular non-bond interactions and how they might contribute to the stability of the structure of crystalline native cellulose. 0969--0239 © 1998 Blackie Academic & Professional     

Moisture uptake in native cellulose – the roles of different hydrogen bonds: a dynamic FT-IR study using Deuterium exchange

This paper aims at a better understanding of the interaction between cellulose and moisture. In particular, the role of different hydrogen bonds in moisture uptake is investigated. Dynamic Fourier transform infrared spectroscopy (FT-IR) has been used in combination with deuterium exchange, which permits the labelling of cellulose domains with different accessibilities. The static spectra indicate a marked exchange of deuterium for the O2–H⋯O6 bonds, but only a limited exchange for the O3–H⋯O5 bonds. In the dynamic FT-IR spectra, deuteration gives rise to the growth of a broad band at wavenumbers around 2500 cm⁻¹. The rather unstructured appearance of the band suggests that deuteration is occurring only on the surface of the cellulose crystallites, i.e. in more or less non-load-carrying parts. This is corroborated by the lack of split peaks related to OD bonds in this band. In agreement with these observations, the split peak related to O3–H⋯O5 bonds and assigned to the load carrying cellulose structure increases during both H₂O and D₂O moisture conditioning, indicating a shift of the load transfer towards the backbone of the cellulose structure.     

Hydration effects on spacing of primary-wall cellulose microfibrils: a small angle X-ray scattering study

Celery collenchyma cell walls are typical of primary plant cell walls in their composition but contain unusually well-oriented cellulose microfibrils that are packed with more regularity than normal, permitting small-angle X-ray scattering (SAXS) experiments that would not otherwise be possible. Small-angle scattering data were obtained for the cell walls in essentially their native state and for isolated cellulose, in a fibrous form that retained the physical shape and microfibril orientation of the native cell walls. The scattering patterns showed a distinct peak attributed to the interference contribution to the convolution of form and interference functions. The position of the peak attributed to the interference function implied a mean centre-to-centre microfibril spacing of approximately 3.2 nm in dry isolated cellulose and 3.8 nm in dry cell walls. Hydration increased the mean microfibril spacing in the cell walls to 5.4 nm but had only a small effect on the mean microfibril spacing of isolated cellulose. In the scattering profile from intact, hydrated cell walls it was just possible to discern the position of the first Bessel minimum, from which a microfibril diameter in the range 3.1–3.6 nm may be estimated. This estimate is likely to include attached hemicellulose chains. Porod plots of scattering intensity indicated a relatively sharp interface between microfibrils and their immediate surroundings. The SAXS data imply that cellulose microfibrils 2.6–3.0 nm in diameter are not quite in lateral contact with one another in the isolated cellulose and are augmented by hemicelluloses and separated by readily hydrated matrix polysaccharides in the native plant cell wall.     

Structure of cellulose and microcrystalline cellulose from various wood species, cotton and flax studied by X-ray scattering

The structure of microcrystalline cellulose (MCC) made by mild acid hydrolysis from cotton linter, flax fibres and sulphite or kraft cooked wood pulp was studied and compared with the structure of the starting materials. Crystallinities and the length and the width of the cellulose crystallites were determined by wide-angle X-ray scattering and the packing and the cross-sectional shape of the microfibrils were determined by small-angle X-ray scattering. The morphological differences were studied by scanning electron microscopy. A model for the changes in microfibrillar structure between native materials, pulp and MCC samples was proposed. The results indicated that from softwood or hardwood pulp, flax cellulose and cotton linter MCC with very similar nanostructures were obtained with small changes in reaction conditions. The crystallinity of MCC samples was 54–65%. The width and the length of the cellulose crystallites increased when MCC was made. For example, between cotton and cotton MCC the width increased from 7.1 nm to 8.8 nm and the length increased from 17.7 nm to 30.4 nm. However, the longest crystallites were found in native spruce wood (35–36 nm).     

Structure and crystallization of sub-elementary fibrils of bacterial cellulose isolated by using a fluorescent brightening agent

The structure and crystallization of carefully isolated sub-elementary fibrils (SEFs) of bacterial cellulose have been investigated using TEM, WAXD, and high-resolution solid-state ¹³C NMR. The addition of a suitable amount of fluorescent brightener (FB) to the incubation medium of Acetobacter xylinum effectively suppressed the aggregation of the SEFs into the microfibrils, as previously reported. However, this study confirmed for the first time that serious structural change in the SEFs occurs during the removal of excess FB by washing with buffer solutions having pH values higher than 6 or with the alkaline aqueous solution that was frequently used in previous studies. In contrast, the isolation of unmodified SEFs was successfully performed by utilizing a washing protocol employing pH 7 citrate–phosphate buffer solution containing 1% sodium dodecyl sulfate. High-resolution solid-state ¹³C NMR and WAXD measurements revealed that the SEFs thus isolated are in the noncrystalline state in which the pyranose rings of the almost parallel cellulose chains appear to be stacked on each other. The respective CH₂OH groups of the SEFs adopt the gt conformation instead of the tg conformation found in cellulose I _α and I _β crystals, and undergo significantly enhanced molecular motion in the absence of intermolecular hydrogen bonding associated with these groups. The main chains are also subject to rapid motional fluctuations while maintaining the parallel orientation of the respective chains, indicating that the SEFs have a liquid crystal-like structure with high molecular mobility. Moreover, the SEFs crystallize into cellulose I _β when the FB molecules that may adhere to the surface of the SEFs are removed by extraction with boiling 70 v/v% ethanol and 0.1N NaOH aqueous solution. On the basis of these results, the crystallization of the SEFs into the I _α and I _β forms is discussed, including the possible formation of the crystalline-noncrystalline periodic structure in native cellulose.     

A critique on the structural analysis of lignins and application of novel tandem mass spectrometric strategies to determine lignin sequencing

This review is devoted to the application of MS using soft ionization methods with a special emphasis on electrospray ionization, atmospheric pressure photoionization and matrix‐assisted laser desorption/ionization MS and tandem MS (MS/MS) for the elucidation of the chemical structure of native and modified lignins. We describe and critically evaluate how these soft ionization methods have contributed to the present‐day knowledge of the structure of lignins. Herein, we will introduce new nomenclature concerning the chemical state of lignins, namely, virgin released lignins (VRLs) and processed modified lignins (PML). VRLs are obtained by liberation of lignins through degradation of vegetable matter by either chemical hydrolysis and/or enzymatic hydrolysis. PMLs are produced by subjecting the VRL to a series of further chemical transformations and purifications that are likely to alter their original chemical structures. We are proposing that native lignin polymers, present in the lignocellulosic biomass, are not made of macromolecules linked to cellulose fibres as has been frequently reported. Instead, we propose that the lignins are composed of vast series of linear related oligomers, having different lengths that are covalently linked in a criss‐cross pattern to cellulose and hemicellulose fibres forming the network of vegetal matter. Consequently, structural elucidation of VRLs, which presumably have not been purified and processed by any other type of additional chemical treatment and purification, may reflect the structure of the native lignin. In this review, we present an introduction to a MS/MS top–down concept of lignin sequencing and how this technique may be used to address the challenge of characterizing the structure of VRLs. Finally, we offer the case that although lignins have been reported to have very high or high molecular weights, they might not exist on the basis that such polymers have never been identified by the mild ionizing techniques used in modern MS. Copyright © 2015 John Wiley & Sons, Ltd.     

Synthesis,characterization, and crystal structure of [Ni(dap(A)<Subscript>2</Subscript>)]<Subscript>2</Subscript> (dap(AH)<Subscript>2</Subscript>: 2,6-diacetylpyridine bis(anthraniloyl hydrazone))—a molecule possessing an infinite double helical chain in the solid state

Anthraniloyl hydrazide (AH) contains two −NH₂ groups, one of them is attached to the aromatic ring and the other is the hydrazinic, −NH₂. It is found that only the later reacts with the carbonyl compounds to form Schiff bases, while the former remains inert. The reasons behind this difference in reactivity are analyzed on the basis of semi-empirical calculations, which show that the lone pair of the ring −NH₂ is considerably delocalized over the ring, resulting in an accumulation of a positive charge on this particular nitrogen. Ni(II) complex of 2,6-diacetylpyridine bis(anthraniloyl hydrazone) has been prepared and characterized by various physico-chemical methods. The structure of the complex was determined by X-ray crystallography. It was found that in the solid state, the compound exist as a dimer, and two coordinated ligand moieties form a double helix around the two metal ions. H-bonding then results in extension of double helix to an infinite chain.     

Physicochemical properties of maize cob cellulose powders reconstituted from ionic liquid solution

Suitable α-cellulose and cellulose II powders for use in the pharmaceutical industry can be derived from maize cob. α-Cellulose was extracted from an agricultural residue (maize cobs) using a non-dissolving method based on inorganic substances. Modification of this α-cellulose was carried out by its dissolution in the ionic liquid 1-butyl-3-methylimidazolium chloride ([C₄mim]Cl), and subsequent regeneration by addition of either water or acetone at room temperature, or of boiling water. X-ray diffraction and infrared spectroscopy results showed that the regenerated celluloses had lower crystallinity, and proved that the treatment with [C₄mim]Cl led to the conversion of the crystalline structure of α-cellulose from cellulose I to cellulose II. Thermogravimetric analysis and differential scanning calorimetry data showed quite similar thermal behavior for all cellulose samples, although with somewhat lower stability for the regenerated celluloses, as expected. The comparison of physicochemical properties of the regenerated celluloses and the native cellulose mainly suggests that the regenerated ones might have better flow properties. For some of the characterizations carried out, it was generally observed that the sample regenerated with boiling water had more similar characteristics to the α-cellulose sample, evidencing an influence of the regeneration strategy on the resulting powder after the ionic liquid treatment.     

A resorbable calcium-deficient hydroxyapatite hydrogel composite for osseous regeneration

It was previously discovered that the unique structure and chemistry of bacterial cellulose (BC) permits the formation of calcium-deficient hydroxyapatite (CdHAP) nanocrystallites under aqueous conditions at ambient pH and temperature. In this study, BC was chemically modified via a limited periodate oxidation reaction to render the composite degradable and thus more suitable for bone regeneration. While native BC does not degrade in mammalian systems, periodate oxidation yields dialdehyde cellulose which breaks down at physiological pH. The composite was characterized by tensile testing, X-ray diffraction, Fourier transform infrared spectroscopy, and scanning electron microscopy. X-ray diffraction showed that oxidized BC retains its structure and could biomimetically form CdHAP. Degradation behavior was analyzed by incubating the samples in simulated physiological fluid (pH 7.4) at 37 °C under static and dynamic conditions. The oxidized BC and oxidized BC-CdHAP composites both lost significant mass after exposure to the simulated physiological environment. Examination of the incubation solutions by UV–Vis spectrophotometric analysis demonstrated that, while native BC released only small amounts of soluble cellulose fragments, oxidized cellulose releases carbonyl containing degradation products as well as soluble cellulose fragments. By entrapping CdHAP in a degradable hydrogel carrier, this composite should elicit bone regeneration then resorb over time to be replaced by new osseous tissue.     

Conversion of cellulose materials into nanostructured ceramics by biomineralization

Synthesis of hierarchically ordered silica materials having ordered wood cellular structures has been demonstrated through in-situ mineralization of wood by means of surfactant-directed mineralization in solutions of different pH. At low pH, silicic acid penetrates the buried interfaces of the wood cellular structure without clogging the pores to subsequently “molecularly paint” the interfaces thereby forming a positive replica following calcinations. At high pH, the hydrolyzed silica rapidly condenses to fill the open cells and pits within the structure resulting in a negative replica of the structure. Surfactant-templated mineralization in acid solutions leads to the formation of micelles that hexagonally pack at the wood interfaces preserving structural integrity while integrating hexagonally ordered nanoporosity into the structure of the cell walls following thermal treatment in air. The carbothermal reduction of mineralized wood with silica at high temperature produces biomorphic silicon carbide (SiC) materials, which are typical aggregations of β-SiC nanoparticles. To understand the roles of each component (lignin, crystalline cellulose, amorphous cellulose) comprising the natural biotemplates in the transformation to SiC rods, three different cellulose precursors including unbleached and bleached pulp, and cellulose nanocrystals have been utilized. Lignin in unbleached pulp blocked homogeneous penetration of silica into the pores between cellulose fibers resulting in non-uniform SiC fibers containing thick silica layers. Bleached pulp produced uniform SiC rods with camelback structures (80 nm in diameter; ∼50 μm in length), indicating that more silica infiltrates into the amorphous constituent of cellulose to form chunky rather than straight rod structures. The cellulose nanocrystal (CNXL) material produced clean and uniform SiC nanowires (70 nm in diameter; >100 μm in length) without the camelback structure.     

The role of ester groups in resistance of plant cell wall polysaccharides to enzymatic hydrolysis

Xylan backbones in native plant cell walls are extensively acety-lated. Previously, no direct investigations as to their role in cellulolytic enzyme resistance have been done, though indirect results point to their importance. An in vitro deesterification of aspen wood and wheat straw has been completed using hydroxylamine solutions. Yields of 90% acetyl ester removal for both materials have been accomplished, with little disruption of other fractions (i.e., lignin). Apparently, as the xylan becomes increasingly deacetylated, it becomes 5–7 times more digestible. This renders the cellulose fraction more accessible, and 2–3 times more digestible. This effect levels off near an acetyl removal of 75%, where other resistances become limiting.     

Interpretation of relaxation and swelling phenomena in lyocell regenerated cellulosic fibres and textiles associated with the uptake of solutions of sodium hydroxide

The uptake of solutions of sodium hydroxide by lyocell fibre results in a phenomenon in textiles described as swelling–shrinkage. The response of woven fabrics in a tensile stress–relaxation experiment shows two time-dependent processes, corresponding to different mechanisms of pressure development. Rapid diffusion has been assigned to osmotic swelling through the interconnected pore structure of the fibre (D = 6–15 × 10⁻¹² m²/s), which is influenced by the extent of ionization of hydroxyl groups at the pore surfaces. A ratio for the cellulose and water dissociation constants (K_cell/K_w) of 70 provides best agreement with experimental data. A second slower diffusion process (D = 2–10 × 10⁻¹⁴ m²/s) is assigned to transport through the cellulose polymer structure, associated with the Na-cellulose transition. This can be modeled assuming an ion-exchange equilibrium, where the cellulose gel converts reversibly between compact hydrogen and expanded sodium forms, with K = 1.04 × 10¹⁴, in favour of the hydrogen form. The model successfully predicts the concentration dependence of the transition and the movement to higher concentration with external constraint. The slow diffusion process only becomes apparent at high alkali concentrations, as the pores in the fibre collapse due to the expansion of the gel. Continued gel-diffusion is only possible through the polymer phase, which then dominates over fast pore-diffusion.     

Enzymes involved in cellulose and lignin degradation

A detailed presentation was given of the discovered and studied enzymes involved in degradation of cellulose and lignin by the white-rot fungus,Sporotrichum pulverulentum (Phanerochaete chrysosporium). The fungus utilizes, for the degradation of cellulose: (a) Five different endo-1,4-Β-glucanases (b) One exo-1,4-Β-glucanase (acting synergistically with the endoglucanases) (c) Two 1,4-Β-glucosidases The regulation, induction, and catabolite repression of the endoglucanases have been studied in depth and the results of these studies were also presented. In addition to the hydrolytic enzymes,S. pulverulentum also produces the oxidative enzyme cellobiose oxidase that is of importance for cellulose degradation. Another unconventional enzyme is cellobiose: quinone oxidoreductase, which is of importance for both cellulose and lignin degradation. It reduces quinones from the lignin under oxidation of cellobiose from the cellulose. It has recently been discovered thatS. pulverulentum produces two acidic proteases of importance for cellulose degradation since they enhance the endoglucanase activity, particularly in young cultures of the fungus grown on cellulose. The enzymes involved in lignin degradation are not known nearly as well as these involved in cellulose degradation. However, extracellular phenol oxidases, laccase, and peroxidase have been shown to be involved in and necessary for lignin degradation to take place. A phenol oxidase-less mutant ofS. pulverulentum cannot degrade lignin unless a phenol oxidase is added to the medium. Recently, an enzyme splitting the α—Β bond in the propane side chain has been discovered by Kirk and coworkers. Several enzymes involved in the metabolism of vanillic acid, always a metabolite in lignin degradation, have been discovered and studied in our laboratory. Presentations of the enzymes for decarboxylation, demethoxylation, methanol oxidation, ring cleavage, and intracellular quinone reduction by NAD(P)H: quinone oxidoreductase were given. A discussion of possibilities for a specific enzymic primary attack on the native lignin, as well as of the likeliness for an unspecific radical nature of this attack, was also given.     

Determination of the stereochemistry of anhydroerythromycin A, the principal degradation product of the antibiotic erythromycin A

Anhydroerythromycin A arises from the acid-catalysed degradation of erythromycin A both in vitro and in vivo. It has negligible antibacterial activity, but inhibits drug oxidation in the liver, and is responsible for unwanted drug-drug interactions. Its structure has 18 chiral centres common with erythromycin A, but C-9 (the spiro carbon) is also chiral in anhydroerythromycin and its stereochemistry has not previously been reported; both 9R- and 9S-anhydroerythromycin A are plausible structures. An understanding of the chirality at C-9 was expected to throw light on the mechanism of acid-catalysed degradation of erythromycin A, a subject that has been debated in the literature over several decades.We now report a determination of the three-dimensional structure of anhydroerythromycin A, including the stereochemistry at C-9, by NMR and molecular modelling. In parallel, the relative stereochemistry of anhydroerythromycin A 2'-acetate was determined by X-ray crystallography. Both compounds were shown to have 9R stereochemistry, and anhydroerythromycin A exhibited considerable conformational flexibility in solution.     

Synthesis and structure of new oxoindoles

The synthesis and study of the structure of new oxoindoles has been carried out. The molecular and crystal structure, and the stereochemistry atom of C(3) of 1,2-diacetyl-5′-phenyl(2′,4′ dihydrospiro[3H-indol-3,3′-[3H]pyrazol]-2-(1H)-one have been established by X-ray crystallography. __________ Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 3, 374–382, March 2007.     

AFM observation of ultrathin microfibrils in fruit tissues

Polysaccharide microfibrils in fruit tissue of higher plants (strawberry, peach, and rambutan) were examined by atomic force microscopy (AFM). For preserving native cellulose microfibrils, a combination of 2% NaClO₂ and 4% NaOH extraction was applied to the materials. This corresponds to mild alkali extractin of holocellulose, and denoted here as weak alkali-resistant polysaccharide, WARP. The amount of neutral sugars corresponded to 53–95% of that of WARP. Glucose was the most abundant in the neutral sugars, being 74–87%. AFM examination of microfibrils dispersed on mica substrate allowed accurate determination of fibril widths as 1.0–2.0 nm. Their straight fibrillar shape and the results of X-ray diffraction and infrared spectroscopy indicate that these fibrils are cellulose. These results constitute direct evidence for existence of ultrafine cellulose microfibrils hitherto assumed from X-ray diffraction and NMR analyses.     

Crystal and molecular structures and luminescence properties of [Eu(Tol)<Subscript>3</Subscript>]<Subscript>2</Subscript> · 2DPH complex

The crystal structure of the [Eu(Tol)₃]₂ · 2DPH complex (Tol = toluic acid anion, DPG = diphenylguanidine) was determined by X-ray crystallography. The coordination polyhedron of a Eu atom [EuO₆] (CN = 8) is a distorted square antiprism with nonplanar quadrilateral faces. Diphenylguanidine molecules have been shown to be randomly distributed over the symmetry centers of a unit cell with site occupancies of 0.5. The π stacking interaction C-H…Cg exists in the structure to stabilize it. Luminescent characteristics of the compound have been determined.