含萘直链多胺化合物的荧光pH效应及核苷磷酸盐的分子识别

合成了三种含萘但链长不同的多胺类化合物.研究了它们在不同pH条件下的荧光光谱，发现所研究化合物的荧光强度与pH值间有着强烈的依赖关系，因此这类化合物可用作测定溶液pH值的荧光探针.在上述化合物溶液中分别引入不同的核苷磷酸盐（ATP、ADP、AMP），发现所研究的化合物如N-(2-氨乙基)-N’-（2-[(1-萘甲基)氨乙基]）乙二胺(化合物3)，其荧光可被不同的核苷磷酸盐所猝灭.以Stern-Volmer常数（KSV）或猝灭常数（Kq）作为评估猝灭能力大小的标准表明,不同核苷磷酸盐的猝灭能力是各不相同的.其中ATP有着对化合物3荧光最大的猝灭功能.实验结果表明,分子尺寸的匹配和化合物中基团的空间合理排布是化合物和核苷磷酸盐间能发生相互作用的重要根据,而猝灭则强烈地依赖于这类物种间的相互作用,因此可利用化合物荧光强度的改变来识别各种不同的核苷磷酸盐.     

Amplified quenching of a conjugated polyelectrolyte by cyanine dyes

The conjugated polyelectrolyte PPESO3 features a poly(phenylene ethynylene) backbone substituted with anionic 3-sulfonatopropyloxy groups. PPESO3 is quenched very efficiently (KSV > 10(6) M(-1)) by cationic energy transfer quenchers in an amplified quenching process. In the present investigation, steady-state and picosecond time-resolved fluorescence spectroscopy are used to examine amplified quenching of PPESO3 by a series of cyanine dyes via singlet-singlet energy transfer. The goal of this work is to understand the mechanism of amplified quenching and to characterize important parameters that govern the amplification process. Steady-state fluorescence quenching of PPESO3 by three cationic oxacarbocyanine dyes in methanol solution shows that the quenching efficiency does not correlate with the Forster radius computed from spectral overlap of the PPESO3 fluorescence with the cyanines' absorption. The quenching efficiency is controlled by the stability of the polymer-dye association complex. When quenching studies are carried out in water where PPESO3 is aggregated, changes observed in the absorption and fluorescence spectra of 1,1',3,3,3',3'-hexamethylindotricarbocyanine iodide (HMIDC) indicate that the polymer templates the formation of a J-aggregate of the dye. The fluorescence dynamics in the PPESO3/HMIDC system were probed by time-resolved upconversion and the results show that PPESO3 to HMIDC energy transfer occurs on two distinctive time scales. At low HMIDC concentration, the dynamics are dominated by an energy transfer pathway with a time scale faster than 4 ps. With increasing HMIDC concentration, an energy pathway with a time scale of 0.1-1 ns is active. The prompt pathway (tau < 4 ps) is attributed to quenching of delocalized PPESO3 excitons created near the HMIDC association site, whereas the slow phase is attributed to intra- and interchain exciton diffusion to the HMIDC.     

GEOMETRIC REQUIREMENTS FOR THE INTRAMOLECULAR QUENCHING OF INDOLE FLUORESCENCE BY AMIDE AND CARBOXYLIC ACID GROUPS IN RIGID MOLECULES WITH THE [2,2,1]BICYCLOHEPTENYL SKELETON

Abstract— The geometric requirements for intramolecular fluorescence quenching of indole by carboxylic acid and amide functions have been determined in rigid norbornyl ([2.2,1]bicycloheptenyl) skeleton: trans and cis 3-(3'-indolyl) norbornene 2-dimethylcarboxamides or carboxylic acids. The reference compound was the 3-(3'-indolyl) N-dimethylpropionamide or -propanoic acid. The quenching occurs mainly in protic solvents. In the cis compounds, the quantum yields are strongly decreased when compared to the trans and open chain compounds. As determined by the pH dependence of fluorescence of the acids, it is in the acid form—COOH that the fluorescence is quenched; in the ionized species -CO⁻₂, only small quenching is observed. The K_s of Stern-Volmer equations are very small for the cis bicyclic acid and amide, the indole nucleus being shielded on one side only. The results support the hypothesis that small rearrangement of the peptide bond in protein conformation changes may be detected by fluorescence.     

Triazole linked picolylimine conjugate of calix[6]arene as a sequential sensor for La3+ followed by F-

A new 1,3,5-tris-triazole linked picolylimine conjugate of calix[6]arene (L) has been shown to be selective toward La(3+) by turn on fluorescence with ～70-fold enhancement and emits blue, with a minimal detection limit of 65 ± 5 ppb (490 nM). The species of recognition has been modeled computationally to have a monocapped twisted square antiprism with a N(6)O(3) binding core about La(3+). The in situ complex of L with La(3+) recognizes F(-) via fluorescence quenching. The reversible response of sensing La(3+) and F(-) sequentially by L has been demonstrated.     

Photophysics of untethered ZnTPP-fullerene complexes in solution

The spectroscopy and dynamic behavior of the self-assembled, Soret-excited zinc tetraphenylporphyrin (ZnTPP) plus fullerene (C(60)) model system in solution has been examined using steady state fluorescence quenching, nanosecond time-correlated single photon counting, picosecond fluorescence upconversion, and picosecond transient absorption methods. Evidence of ground state complexation is presented. Steady-state quenching of the S(2) and S(1) fluorescence of ZnTPP by C(60) reveals that the quenching processes only occur in the excited complexes, are ultrafast, and proceed at different rates in the two states. Only uncomplexed ZnTPP is observed by fluorescence lifetime methods; the locally excited complexes are either dark or, more likely, rapidly relax to products that do not radiate strongly. Both short-range (Dexter) energy transfer and electron transfer relaxation mechanisms are evaluated. Picosecond transient absorption data obtained from the subtle differences between the spectra of Soret-excited ZnTPP with and without a large excess of added C(60) reveal the formation, on a subpicosecond time scale, of relatively long-lived charge-separated species. Soret excitation of ZnTPP···C(60) does not produce a quantitative yield of species in the lower S(1) excited state.     

Preliminary study on dual fluorescence behavior of porphyrin

It is well known that porphyrin derivatives play a key role in the primary process of photo-synthesis[1], in which porphyrins directly absorb the sunlight or indirectly acquire excitation en-ergy from light-harvesting antenna system to reach their excited state, and then donate electrons to quinone acceptors to yield a series of charge-separated species. In general, only first singlet ex-cited state of porphyrins is involved in energy transfer process[2]. However, highly excited state (S2 stat…     

The Role of Time-Dependent Measurements in Elucidating Static Versus Dynamic Quenching Processes

Abstract— Fluorescence quenching provides a unique method for assessing the ability of quenching species to approach a fluorophore. The distance scale depends on the mechanism of quenching ( e.g. compare Forster energy transfer with the external heavy atom effect and/or electron transfer). If one is dealing with amphiphilic systems or hydrophobic surface/water interfaces then ionic and organic quenchers can be compared. While the general concepts of "static" and "dynamic" quenching are well known and often used to characterize the mechanism of fluorescence quenching, it is this author's experience that for many systems the quenching mechanism is "mixed." The signature of this situation is when the quenching of the steady-state intensity does not match the quenching of the average fluorescence lifetime. First a few of the standard quenching models are reviewed and then a simple approach to characterize the degree of static quenching is discussed. Finally, it is indicated that careful analysis of the fluorescence decay for the shortest timescale should be undertaken if one wishes to estimate accurately the rate of static quenching and that this may be expected to be particularly demanding in the case of fluorophores with longer lifetimes. Although fluorescence is stressed in the discussion that follows, the same concepts would apply to phosphorescence from triplet states, except for the generally longer timescale encountered.     

Ultra-sensitive fluorescent sensor for Hg2+ based on a donor-acceptor-donor framework

A new fluoroionophore [E-4,4'-di(N-(2-pyridyl)amino)stilbene, E1] with a donor-acceptor-donor framework, which features a central stilbene (acceptor) fluorophore and two terminal pyridylamino (donor) ionophores, is reported. The probe displays an ultrasensitive fluorescence quenching response toward Hg(2+) in H(2)O/THF. Coordination of Hg(2+) to E1 affords a 2:1 complex, enabling the detection of Hg(2+) at a concentration as low as 4.4 × 10(-14) M. The interactions between the two species have been thoroughly characterized with UV-vis absorption spectroscopy, fluorescence spectroscopy, and nuclear magnetic resonance spectroscopy. Density functional theory calculations provide further insights into the nature of the fluorescence quenching response. In contrast, a fluorescent molecule with the donor-acceptor architecture, E-4-(N-(2-pyridyl)amino)stilbene (E4), exhibits a greatly attenuated fluorescence quenching response toward Hg(2+).     

THE ROLE OF GROUND STATE COMPLEXATION IN THE ELECTRON TRANSFER QUENCHING OF METHYLENE BLUE FLUORESCENCE BY PURINE NUCLEOTIDES

The effect of three purine nucleotides on the fluorescence of methylene blue in aqueous buffer has been investigated. Guanosine-5'-monophosphate (GMP) and xanthosine-5'-monophosphate cause fluorescence quenching while adenosine-5'-monophosphate causes a red shift in the fluorescence maximum. All three nucleotides form ground state complexes with the nucleotides as indicated by absorption spectroscopy. The fluorescence changes at nucleotide concentrations less than 30 mM are best described by a static mechanism involving the formation of non-fluorescent binary and ternary complexes in competition with dimerization of the dye. Quenching of the fluorescence decay (tau = 368 ps) at high GMP concentrations (10-100 mM) occurs at the rate of diffusion. The mechanism of fluorescence quenching may involve electron transfer within the singlet excited dye-nucleotide complex although published values of the oxidation potentials of various purine derivatives would suggest that all three nucleotides should cause quenching. Evidence for electron transfer was obtained from flash photolysis experiments in which 100 mM GMP was found to cause the appearance of a long lived transient species absorbing in the region expected for semimethylene blue.     

Metal-enhanced fluorescence of carbon nanotubes

The photoluminescence (PL) quantum yield of single-walled carbon nanotubes (SWNTs) is relatively low, with various quenching effects by metallic species reported in the literature. Here, we report the first case of metal enhanced fluorescence (MEF) of surfactant-coated carbon nanotubes on nanostructured gold substrates. The photoluminescence quantum yield of SWNTs is observed to be enhanced more than 10-fold. The dependence of fluorescence enhancement on metal-nanotube distance and on the surface plasmon resonance (SPR) of the gold substrate for various SWNT chiralities is measured to reveal the mechanism of enhancement. Surfactant-coated SWNTs in direct contact with metal exhibit strong MEF without quenching, suggesting a small quenching distance for SWNTs on the order of the van der Waals distance, beyond which the intrinsically fast nonradiative decay rate in nanotubes is little enhanced by metal. The metal enhanced fluorescence of SWNTs is attributed to radiative lifetime shortening through resonance coupling of SWNT emission to the reradiating dipolar plasmonic modes in the metal.     

Protonation and coordination properties towards Zn(II), Cd(II) and Hg(II) of a phenanthroline-containing macrocycle with an ethylamino pendant arm

Protonation and Zn(II), Cd(II) and Hg(II) coordination with the ligand 5-aminoethyl-2,5,8-triaza-[9]-10,23-phenanthrolinophane (L2), which contains an aminoethyl pendant attached to a phenanthroline-containing macrocycle, have been investigated by means of potentiometric, 1H NMR and spectrofluorimetric titrations in aqueous solutions. The coordination properties of L2 are compared with those of the ligand 2,5,8-triaza-[9]-10,23-phenanthrolinophane (L1). Ligand protonation occurs on the aliphatic amine groups and does not involve directly the heteroaromatic nitrogens. The fluorescence emission properties of L2 are controlled by the protonation state of the benzylic nitrogens: when not protonated, their lone pairs are available for an electron transfer process to the excited phenanthroline, quenching the emission. As a consequence, the ligand is emissive only in the highly charged [H3L2]3+ and [H4L2]4+ species, where the benzylic nitrogens are protonated. Considering metal complexation, both [ML1]2+ and [ML2]2+ complexes (M = Zn(II) and Cd(II)) are not emissive, since the benzylic nitrogens are weakly involved in metal coordination, and, once again, they are available for quenching the fluorescence emission. Protonation of the L2 complexes to give [MHL2]3+ species, instead, leads to a recovery of the fluorescence emission. Complex protonation, in fact, occurs on the ethylamino group and gives a marked change of the coordination sphere of the metals, with a stronger involvement in metal coordination of the benzylic nitrogens; consequently, their lone pairs are not available for the process of emission quenching.     

Dye induced quenching of firefly luciferase-luciferin bioluminescence

The quenching of firefly bioluminescence (BL) in presence of xanthene dyes and tetratolylporphyrin was investigated. The BL intensity was quenched with an altered decay pattern in presence of xanthene dyes and tetratolylporphyrin. The electronic absorption spectra indicate that there is no significant interaction occurring between the dyes and the BL components in the ground state. The BL quenching decay rate and fluorescence quenching studies of luciferin by the dyes suggest an energy transfer through an exciplex, involving oxyluciferin, in the excited state and the dyes, in the ground state. The bimolecular quenching rate constant (K(q)) values obtained from fluorescence studies varied between 7.7 x 10(12) and 19.8 x 10(12)M(-1)s(-1). The magnitude of the bimolecular quenching rate constants confirmed the complex formation between dye and excited oxyluciferin. The exciplex subsequently undergoes a non-radiative decay to the ground state via a combination of heavy atom induced and F?rster-type energy transfer. The decay rate constants in presence and in absence of dyes vary between 7.47 x 10(-4) and 7.6 x 10(-2)s(-1). In the presence of dyes the effective decay rate constants (k(eff)) increased while the lifetime of light emitting species decreased. The kinetic studies in presence of singlet oxygen scavengers, like beta-carotene and NaN(3), prove that there is no significant quenching of the firefly BL due to the formation of singlet oxygen.     

Characterization of the interaction between farrerol and bovine serum albumin by fluorescence and circular dichroism

The binding of farrerol to bovine serum albumin (BSA) in aqueous solution was investigated by fluorescence quenching spectra, synchronous fluorescence spectra, circular dichroism (CD) and the three-dimensional (3D) fluorescence spectra at pH 7.40. The results of fluorescence titration indicated that farrerol could quench the intrinsic fluorescence of BSA in a static quenching way. The cause of showing upward curvy patterns in Stern-Volmer plots was analyzed. The binding sites number n and binding constant K using fluorescence quenching equation at 310 K were calculated. The binding distance and the energy transfer efficiency between farrerol and BSA were also obtained according to the theory of F?rster's non-radiation energy transfer. The effect of some metal ions on the binding constant of farrerol with BSA was also studied. The effect of farrerol on the conformation of BSA was analyzed using CD, synchronous fluorescence spectra and three-dimensional (3D) fluorescence spectra under experimental conditions. Furthermore, the fluorescence displacement experiments indicated that farrerol could bind to the site I of BSA.     

Fe3+存在下磺胺甲恶唑与牛血清白蛋白相互作用的光谱学研究

在模拟生理条件下,应用荧光光谱、紫外吸收光谱以及傅立叶变换红外光谱研究Fe3+存在下磺胺甲恶唑(Sulfamethoxazole,SMZ)与牛血清白蛋(Bovine Serum Albumin,BSA)的相互作用.结果表明,Fe3+存在时SMZ与BSA结合常数增大,作用力类型由疏水作用力转变为氢键和范德华力.无论Fe3...     

Determination of environmentally important metal ions by fluorescence quenching in anionic micellar solution

This work describes the effect of a variety of metal ions as quenchers of the fluorescence of naphthalene, in aqueous micellar solutions of sodium dodecyl sulfate (SDS). The quenching by the metal ions can be adequately described by the Stern-Volmer equation and the best signal to noise ratios are obtained with low micellized detergent concentrations. Apparent Stern-Volmer constants decrease in the order: Fe3+ > Cu2+ > Pb2+ > Cr3+ > Ni2+ and directly reflect the relative sensitivity of the method for these ions. Detection limits (defined as three times the standard deviation of the blank for n= 10) for the fluorescence quenching of naphthalene by the metal ions in aqueous micellar SDS are in the range of 1.0 x 10(-6) to 1.0 x 10(-5) mol dm(-3). The proposed fluorescence quenching method shows good repeatibility for a variety of added quencher metal ions, indicating that anionic micelle-enhanced fluorescence quenching by metal ions constitutes an analytical method of rather general application.     

Host-guest complexation behaviour of emissive calix[3]naphthobipyrrole toward aromatic guests

A new hexapyrrolic macrocycle composed of three naphthobipyrrole units has been synthesized which exhibited different emission changes with hydrogen pyrophosphate and benzoate ions. Phosphate ions caused red shifting of the fluorescence band of calixnaphthobipyrrole while benzoate ions resulted in quenching of the same. The fluorescence quenching was further utilized for investigating binding preferences of the probe with neutral aromatic guest molecules substituted with groups having varied electron withdrawing abilities. The extent of quenching with the neutral guests increased with the increasing electron deficiency on the aromatic ring of the guest. The fluorescence quenching has been ascribed to electron transfer from the host to the guest species.     

Appearance of pure fluorocarbon micelles surveyed by fluorescence quenching of amphiphilic quinoline derivatives in fluorocarbon and hydrocarbon surfactant mixtures

A halide-sensitive fluorescence probe was utilized to evaluate the miscibility of fluorocarbon and hydrocarbon surfactants in aqueous micellar systems. The fluorescence of 6-methoxy-N-1,1,2,2-tetrahydroheptadecafluorodecylquinolinium chloride, FC10MQ, was quenched by halide ions dissociated from the surfactant. The fluorescence in micellar solutions showed an initially rapid decay. This suggests that halide ions effectively quench FC10MQ fluorescence at the micellar surface. The subsequent slow decay corresponds to the quenching of FC10MQ fluorescence in the aqueous bulk phase by the free counterions. The Stern-Volmer plots for fluorescence quenching gave a distinct break at the critical micelle concentration of the cationic surfactants. The abrupt increase in fluorescence quenching is attributed to the solubilization of the probe in the micelles. The fluorescence quenching behavior provides direct information about the immiscibility of fluorocarbon and hydrocarbon species in micelles, and the results indicate that almost pure fluorocarbon micelles appear in surfactants mixtures.     

UV–vis photodegradation of dyes in the presence of colloidal Q-CdS

The interaction of the dyes Safranin-O (SO) and Orange II (OII) with aqueous colloidal Q-CdS clusters, which emit single fluorescence bands with maximum wavelengths at 481 nm (excitonic band) or 559 nm (trapped band), has been studied. This was carried out by monitoring both the photodegradation of the dye in the presence of the clusters and the quenching of the clusters fluorescence by the dyes. The photolysis experiments were carried out by excitation either at 520 nm (the wavelength at which the dyes, but not the clusters absorb light) or at 350 nm (the wavelength at which the clusters strongly absorb light, and the dyes have absorbance minima). At 520 nm, photodegradation of SO could be observed, which follows a first-order kinetics (for trapped-band clusters) and a second-order kinetics (for excitonic-band clusters). For the excitation wavelength of 350 nm, photodegradation of either of the dyes could not be observed. The Stern–Volmer plots for the quenching of the excitonic band-clusters fluorescence by SO show an upward curvature, pointing to the occurrence of more than one species acting as the fluorescence quencher, whereas the Stern–Volmer plots for the quenching of the trapped band-clusters fluorescence by SO are linear, indicating that only one species acts as a fluorescence quencher. Lambert–Beer type plots (absorbance vs. concentration) are linear for SO in water and in trapped band-clusters solutions, but a similar study of SO in excitonic band-clusters solution show the occurrence of a new band, which can be assigned to a ground-state dimer of the dye. The latter can be used to explain both the upward curvature of the Stern–Volmer plots and the second-order kinetics observed for SO photodegradation in the SO-excitonic band-clusters system. The Stern–Volmer plots for the quenching of both fluorescence bands by OII are linear.     

A close look at fluorescence quenching of organic dyes by tryptophan.

Understanding fluorescence quenching processes of organic dyes by biomolecular compounds is of fundamental importance for in-vitro and in-vivo fluorescence studies. It has been reported that the excited singlet state of some oxazine and rhodamine derivatives is efficiently and almost exclusively quenched by the amino acid tryptophan (Trp) and the DNA base guanine via photoinduced electron transfer (PET). We present a detailed analysis of the quenching interactions between the oxazine dye MR121 and Trp in aqueous buffer. Steady-state and time-resolved fluorescence spectroscopy, together with fluorescence correlation spectroscopy (FCS), reveal three contributing quenching mechanisms: 1) diffusion-limited dynamic quenching with a bimolecular quenching rate constant k(d) of 4.0 x 10(9) s(-1) M(-1), 2) static quenching with a bimolecular association constant K(s) of 61 M(-1), and 3) a sphere-of-action contribution to static quenching described by an exponential factor with a quenching constant lambda of 22 M(-1). The latter two are characterized as nonfluorescent complexes, formed with approximately 30 % efficiency upon encounter, that are stable for tens of nanoseconds. The measured binding energy of 20-30 kJ mol(-1) is consistent with previous estimates from molecular dynamics simulations that proposed stacked complexes due to hydrophobic forces. We further evaluate the influence of glycerol and denaturant (guanidine hydrochloride) on the formation and stability of quenched complexes. Comparative measurements performed with two other dyes, ATTO 655 and Rhodamine 6G show similar results and thus demonstrate the general applicability of utilizing PET between organic dyes and Trp for the study of conformational dynamics of biopolymers on sub-nanometer length and nanosecond time-scales.     

方菁染料敏化二氧化钛超微粒的光化学行为

通过吸收光谱、荧光猝灭、单光子计数等手段研究了2-(4-乙胺-2-羟基苯基)-4-(4-乙胺-苯基)-方菁染料(SQ)在TiO2超微粒体系中的光化学行为。结果表明, SQ强烈吸附在TiO2胶粒表面, 表观吸附常数为2.275×10^3mol^-^1 . dm^3。SQ的荧光能被TiO2有效地猝灭,猝灭的效率达97%。根据物质的氧化还原电位、光谱特性及荧光寿命的变化提出光诱导电子界面转移的荧光猝灭机理, 电子转移的速率常数为1.97×10^8s^-^1。