13C chemical shielding tensor orientations in a phosphoenolpyruvate moiety from 13C rotational-resonance MAS NMR lineshapes

The absolute orientations of the three ¹³C chemical shielding tensors in the phosphoenolpyruvate (PEP) moiety in a PEP-model compound with known crystal structure are reported. The study uses a fully ¹³C-enriched polycrystalline sample of triammonium phosphoenolpyruvate monohydrate, (NH₄)₃(PEP)⋅H₂O, and ¹³C MAS NMR experiments fulfilling various different ¹³C rotational-resonance conditions. The absolute ¹³C chemical shielding tensor orientations are derived by iterative fitting, employing numerically exact simulations, of various rotational-resonance ¹³C MAS NMR lineshapes of the three-¹³C-spin system in fully ¹³C-enriched (NH₄)₃(PEP)⋅H₂O. The implications of the results of this study for future, biochemically oriented solid-state NMR studies on the PEP moiety are outlined.     

An experimental and theoretical study of the 13C and 31P chemical shielding tensors in solid O-phosphorylated amino acids

A series of l and dl forms of O-phosphorylated amino acids (serine, threonine, tyrosine) have been studied by using solid-state multinuclear NMR spectroscopy and ab initio calculations. Principal elements of the (13)C and (31)P chemical shielding tensors have been measured and discussed in relation to zwitterionic structures and intermolecular contacts. DFT calculations have been compared with experimental data showing their ability to reproduce experimentally obtained tensor values in this challenging class of compounds. The changes of orientation of (31)P chemical shielding tensor with respect to the molecular frame in the presence of hydrogen bonds have been revealed and discussed on the ground of theoretical calculations. The measurements of internuclear P...P distances, based on Zeeman magnetization exchange between (31)P spins with differing chemical shielding tensor orientations, were exploited for a clear distinction between enantiomers and racemates.     

13C chemical shielding tensors in single crystals of tetraacetylethane

The orientations of the principal axes of the ¹³C chemical shielding tensor of the double-bonded C5 carbon nucleus in single crystals of 1,1,2,2-tetraacetylethane are essentially identical with those of an aromatic carbon nucleus. That observation and the similarities between the tensors of the carbonyl and the enolic carbon nuclei result from strong intramolecular hydrogen bonding.     

Determination of 3J(31P31P) and 13C31P coupling constants in 1,6-diphosphatriptycene from carbon-13 n.m.r. lone pairs effects on 13C31P couplings

The ³¹P? ³¹P and ¹³C? ³¹P coupling constants in 1,6-diphosphatriptycene have been obtained from analysis of its proton decoupled ¹³C n.m.r. spectra. More accurate data, however, resulted from simultaneous analysis of the proton decoupled ¹³C spectra and ³¹P(¹³C) satellite spectra. The ¹³C? ³¹P couplings are strongly influenced by the proximity and orientation of the phosphorus lone pair electrons. The first ³¹P? ³¹P coupling in an aromatic diphosphine is reported.     

Determination of carbon-13 chemical shielding tensor in the liquid state by combining NMR relaxation experiments and quantum chemical calculations

Based on multifield NMR relaxation measurements and quantum chemistry calculations, a strategy aiming at the determination of the chemical shielding tensor (CST) in the liquid state is described. Brownian motions in the liquid state restrict the direct observation of CST to a third of its trace (isotropic shift), and even if CST can be probed indirectly through some spin relaxation rates (specific longitudinal relaxation rates, dipolar chemical shift anisotropy (CSA) cross-correlation rates), an insufficient number of experimental parameters prevents its complete determination. This lack of information can be compensated by using quantum chemical calculations so as to obtain the molecular CST orientation even if a relatively modest level of computation is used. As relaxation parameters involve a dynamic part, a prerequisite is the determination of the molecular anisotropic reorientation which can be obtained independently from dipolar cross-relaxation rates. A polycyclic molecule exhibiting a well-characterized anisotropic reorientation serves as an example for such a study, and some (but not all) carbon-13 chemical shielding tensors can be accurately determined. A comparison with solid-state NMR data and numerous chemical quantum calculations are presented.     

A theoretical study of 31P NMR chemical shielding models for concentrated phosphoric acid solution

Calculations on the hydrates, dimer, and trimer of phosphoric acid were carried out in an effort to obtain a viable model of the phosphorus NMR chemical shielding in 85% phosphoric acid solution. The theoretical approaches used the gauge-including-atomic-orbital (GIAO) 6-311+G(nd,p) basis set at both scaled density functional theory (sB3LYP) and estimated infinite order M?ller-Plesset (EMPI) approaches and with the aug-cc-pvtz basis in the sB3LYP approach. Shieldings and hydrogen bonding stabilization energies are similar in the three approaches and indicate that the faster sB3LYP/6-311+G(nd,p) approach can be used with larger systems. The changes in shielding compared to the isolated species are small and suggest that the undissociated acid dihydrate could serve as a model entity for modeling the phosphorus shielding in concentrated phosphoric acid solution.     

Parameterization of peptide 13C carbonyl chemical shielding anisotropy in molecular dynamics simulations.

NMR chemical shielding anisotropy (CSA) relaxation is an important tool in the study of dynamical processes in proteins and nucleic acids in solution. Herein, we investigate how dynamical variations in local geometry affect the chemical shielding anisotropy relaxation of the carbonyl carbon nucleus, using the following protocol: 1) Using density functional theory, the carbonyl (13)C' CSA is computed for 103 conformations of the model peptide group N-methylacetamide (NMA). 2) The variations in computed (13)C' CSA parameters are fitted against quadratic hypersurfaces containing cross terms between the variables. 3) The predictive quality of the CSA hypersurfaces is validated by comparing the predicted and de novo calculated (13)C' CSAs for 20 molecular dynamics snapshots. 4) The CSA fluctuations and their autocorrelation and cross correlation functions due to bond-length and bond-angle distortions are predicted for a chemistry Harvard molecular mechanics (CHARMM) molecular dynamics trajectory of Ca(2+)-saturated calmodulin and GB3 from the hypersurfaces, as well as for a molecular dynamics (MD) simulation of an NMA trimer using a quantum mechanically correct forcefield. We find that the fluctuations can be represented by a 0.93 scaling factor of the CSA tensor for both R(1) and R(2) relaxations for residues in helix, coil, and sheet alike. This result is important, as it establishes that (13)C' relaxation is a valid tool for measurement of interesting dynamical events in proteins.     

Solid-state NMR and quantum chemical investigations of 13Calpha shielding tensor magnitudes and orientations in peptides: determining phi and psi torsion angles

We report the experimental determination of the (13)C(alpha) chemical shift tensors of Ala, Leu, Val, Phe, and Met in a number of polycrystalline peptides with known X-ray or de novo solid-state NMR structures. The 700 Hz dipolar coupling between (13)C(alpha) and its directly bonded (14)N permits extraction of both the magnitude and the orientation of the shielding tensor with respect to the C(alpha)-N bond vector. The chemical shift anisotropy (CSA) is recoupled under magic-angle spinning using the SUPER technique (Liu et al., J. Magn. Reson. 2002, 155, 15-28) to yield quasi-static chemical shift powder patterns. The tensor orientation is extracted from the (13)C-(14)N dipolar modulation of the powder line shapes. The magnitudes and orientations of the experimental (13)C(alpha) chemical shift tensors are found to be in good accord with those predicted from quantum chemical calculations. Using these principal values and orientations, supplemented with previously measured tensor orientations from (13)C-(15)N and (13)C-(1)H dipolar experiments, we are able to predict the (phi, psi, chi(1)) angles of Ala and Val within 5.8 degrees of the crystallographic values. This opens up a route to accurate determination of torsion angles in proteins based on shielding tensor magnitude and orientation information using labeled compounds, as well as the structure elucidation of noncrystalline organic compounds using natural abundance (13)C NMR techniques.     

31P and 13C NMR Investigations of a Tert Butylcalix[4]Arene-Diphosphate

Abstract

The lanthanide induced ³¹P and ¹³C shifts for calix[4]arenediphosphate 1 are studied. From these investigations an exact assignment of all the 48 C atoms was possible.     

Determination of 31P,31P coupling constants in cyclotriphosphazenes and their influence on 1H and 13C NMR spectra of phosphorus substituents

¹H and ¹³C NMR spectra of symmetrically substituted cyclotriphosphazenes exhibit second‐order effects. The influence of the ³¹P,³¹P coupling constants between ring phosphorus atoms on these effects was studied. Some values of this coupling constant between phosphorus bearing identical substituents were measured using ¹³C satellites of the ³¹P signals or by introduction of a chiral substituent on the third phosphorus atom. Copyright © 2003 John Wiley & Sons, Ltd.     

13C and 31P high resolution solid state NMR studies of cyclophosphamide and its analogues

Three anticancer agents cyclophosphamide, iphosphamide, and bromophosphamide were studied using ¹³C and ³¹P SS NMR. © 2004 Wiley Periodicals, Inc. Heteroatom Chem 15:388–394, 2004; Published online in Wiley InterScience (www.interscience.wiley.com). DOI 10.1002/hc.20028     

Chemical shielding anisotropy of 13C and 15N in acetonitrile

High resolution ¹³C and ¹⁵N NMR spectra have been obtained for powdered CH₃CN. The presence of resolved dipolar structure in the ¹³C spectra permits the conclusion that the symmetry axis of the ¹³C shielding tensor lies along the CN bond direction.     

NMR shielding constants in PH3, absolute shielding scale, and the nuclear magnetic moment of 31P

Ab initio values of the absolute shielding constants of phosphorus and hydrogen in PH(3) were determined, and their accuracy is discussed. In particular, we analyzed the relativistic corrections to nuclear magnetic resonance (NMR) shielding constants, comparing the constants computed using the four-component Dirac-Hartree-Fock approach, the four-component density functional theory (DFT), and the Breit-Pauli perturbation theory (BPPT) with nonrelativistic Hartree-Fock or DFT reference functions. For the equilibrium geometry, we obtained σ(P) = 624.309 ppm and σ(H) = 29.761 ppm. Resonance frequencies of both nuclei were measured in gas-phase NMR experiments, and the results were extrapolated to zero density to provide the frequency ratio for an isolated PH(3) molecule. This ratio, together with the computed shielding constants, was used to determine a new value of the nuclear magnetic dipole moment of (31)P: μ(P) = 1.1309246(50) μ(N).     

13C carbonyl chemical shielding tensors: Comparing SCF,MBPT (2), and DFT predictions to experiment

In this work, we calculate the ¹³C nuclear magnetic resonance chemical shielding tensors for 18 carbonyl-containing compounds. The many-body perturbation theory (MBPT), self-consistent field (SCF), and density functional theory (DFT) formalisms were used with gauge including atomic orbitals (GIAO) to calculate the shielding tensors. Our data suggest that shielding tensors can be efficiently estimated by performing one MBPT(2) correlated calculation (e.g., at a reference geometry) and SCF-level calculations at other geometries and taking the SCF-to-correlated tensor element differences to be geometry independent. That is, the correlation contribution to the chemical shielding seems to be relatively constant over a considerable range of distortions. Treatment of correlation using DFT methods is shown to not be as systematically reliable as with MBPT(2). Data on 18 carbonyl compounds show that the single largest influence on the shielding tensor is the presence of nearby electron-withdrawing or electron-donating groups. Finally, although good agreement with powder or single-crystal experimental data is achieved for two or three tensor eigenvalues, systematic differences remain for one element; the origins of these differences are discussed. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 63: 875–894, 1997     

Experimental and theoretical investigation of the 13C and 15N chemical shift tensors in melanostatin-exploring the chemical shift tensor as a structural probe

The determination of backbone conformations in powdered peptides using 13C and 15N shift tensor information is explored. The 13C and 15N principal shift values in natural abundance 13C and 15N melanostatin (L-Pro-L-Leu-Gly amide) are measured using the FIREMAT technique. Furthermore, the orientation of the C-N bond in the 13C shift principal axis system for the backbone carbons is obtained from the presence of the 13C-14N dipolar coupling. The Ramachandran angles for the title compound are obtained from solid-state NMR data by comparing the experimentally determined shift tensor information to systematic theoretical shielding calculations on N-formyl-L-amino acid-amide models. The effects of geometry optimization and neglect of intermolecular interactions on the theoretical shielding values in the model compounds are investigated. The sets of NMR derived Ramachandran angles are assembled in a set of test structures that are compared to the available single-crystal X-ray structure. Shift tensor calculations on the test structures and the X-ray structure are used to further assess the importance of intermolecular interactions when the shift tensor is used as a structural probe in powdered peptides.     

Determination of 31P chemical shielding tensors from NMR studies on single crystals of chlorotris(triphenylphosphine) rhodium(I)

The ³¹P chemical shielding tensors, and their direction cosines, of the three chemically different phosphorus nuclei in chlorotris(triphenylphosphine) rhodium(I) were determined in single-crystal studies using high-resolution cross-polarization NMR with proton decoupling. The tensors are not axially symmetric and the directions of the most shielded principal values for each of the three phosphorus nuclei are almost parallel to the corresponding PRh bonds.     

Three-bond 31P?31P coupling and 31P chemical shift effects in dimers of phospholium salts and phosphole oxides

The chemically nonequivalent ³¹P nuclei of the Diels-Alder dimers of phospholium ions and phosphole oxides are coupled through three bonds by as much as 35–45 Hz. The chemical shift for a phosphorus atom in the 2-phospholene moiety falls in the expected range; the shift for the constricted atom bridging the 6-membered ring is far downfield, making Δδ as much as 43.5 ppm for one phospholium ion dimer.     

Determination of glucan phosphorylation using heteronuclear 1H,13C double and 1H,13C,31P triple‐resonance NMR spectra

Phosphorylation and dephosphorylation of starch and glycogen are important for their physicochemical properties and also their physiological functions. It is therefore desirable to reliably determine the phosphorylation sites. Heteronuclear multidimensional NMR‐spectroscopy is in principle a straightforward analytical approach even for complex carbohydrate molecules. With heterogeneous samples from natural sources, however, the task becomes more difficult because a full assignment of the resonances of the carbohydrates is impossible to obtain. Here, we show that the combination of heteronuclear ¹H,¹³C and ¹H,¹³C,³¹P techniques and information derived from spectra of a set of reference compounds can lead to an unambiguous determination of the phosphorylation sites even in heterogeneous samples. Copyright © 2013 John Wiley & Sons, Ltd.