Biological sample collection and preparation for trace element analysis

Great efforts have been expended on developing analytical procedures for trace element measurements and improving their sensitivity and specificity. Curiously enough, the fact that the results might be affected by sample collection and manipulation was slow to emerge. A substantial body of experimental evidence now suggests that inappropriate sampling may be responsible for inconsistencies between the results of different investigators.     

Solid phase extraction for sample preparation in trace analysis of ionogenic compounds by capillary isotachophoresis

Various sorbents recommended for solid phase extraction (SPE) in sample preparation procedures were studied for use in combination with capillary isotachophoresis (ITP). They were very efficient in achieving trace concentration levels (low ppb, i.e., low parts per 10⁹) for different types of ITP analytes present in environmental and biological matrices. A macroporous carbon sorbent was convenient for sample preparation in ITP analysis of short chain fatty acids (C₄–C₉) in drinking water. Chelating sorbents based on hydroxyalkyl methacrylate matrix with salicylate, thioglycolate and 8-hydroxyquinolinate functionalities were found to be very suitable for preconcentration of heavy metals with an inherent sample clean-up. An octadecyl-bonded silica sorbent enabled in ITP a photometric detection of -aminobutyrate (labeled with a 2,4,6-trinitrophenyl group) at concentrations considerably lower than required for the determination of this amino acid in cerebrospinal fluid (5·10^–8 mol/l).     

Urine sample preparation for proteomic analysis

Sample preparation for both environmental and more importantly biological matrices is a bottleneck of all kinds of analytical processes. In the case of proteomic analysis this element is even more important due to the amount of cross‐reactions that should be taken into consideration. The incorporation of new post‐translational modifications, protein hydrolysis, or even its degradation is possible as side effects of proteins sample processing. If protocols are evaluated appropriately, then identification of such proteins does not bring difficulties. However, if structural changes are provided without sufficient attention then protein sequence coverage will be reduced or even identification of such proteins could be impossible. This review summarizes obstacles and achievements in protein sample preparation of urine for proteome analysis using different tools for mass spectrometry analysis. The main aim is to present comprehensively the idea of urine application as a valuable matrix. This article is dedicated to sample preparation and application of urine mainly in novel cancer biomarkers discovery.     

Green analytical chemistry in sample preparation for determination of trace organic pollutants

The principles of green chemistry are applied to not only chemical engineering and synthesis, but also increasingly analytical chemistry. We describe environment-friendly analytical techniques applied to isolate and to enrich trace organic pollutants from solid and aqueous samples. Amounts of organic solvents used in analytical laboratories are reduced by applying solventless extraction, extraction using other types of solvent, assisted solvent extraction and miniaturized analytical systems.     

Large sample volume preseparation for trace analysis in isotachophoresis

An isotachophoretic device for the analysis of trace components in a sample with the efficient pre-separation and elimination of bulk components has been suggested and realized. A large volume of the sample in question is separated in a rectangular wide-bore channel packed with a suspension of a granulated polyacrylamide gel and analyzed in free electrolytes in a narrow-bore tube. Trace components, the concentrations of which are 10(-6) mol/l, can be analyzed in 60-70 min applying ca. 1 ml of the sample even in the presence of bulk excess of a major component the concentration of which is by 5 orders of magnitude higher.     

Photopolymerized microtips for sample preparation in proteomic analysis

We demonstrate a novel method for the fabrication of disposable plastic microtips, which we name "EasyTip", by a photopolymerization technique. C18 reversed-phase (C18) and ion metal affinity chromatography (IMAC) beads were immobilized on a plastic pipette tip, made of polypropylene materials, by photo-initiated polymerization. The fabricated EasyTips can be manipulated using commercial pipettes for wash/elution of minute amount of biological samples (< 10 microL) and can be applied for mass spectrometry (MS)-based proteomic analysis, in which the detection sensitivity depends critically on the optimal sample preparation. The recovery of a sample of 25 fmol of tryptic hemoglobin digest loaded in a C18 EasyTip was near 100% and we estimated the loading capacity to be around 0.4-2.0 microg of total proteins or peptides, which is well above a sufficient quantity for MS analysis. The effectiveness of the C18 EasyTips in enhancing the detection sensitivity of matrix-assisted laser desorption/ionization (MALDI)-MS signal, and thus providing a greater sequence coverage, was also demonstrated by the analysis of hemoglobin digest and the in-gel digested epidermal growth factor receptor (EGFR) protein from A431 cell lysate. We also demonstrated the usefulness of the immobilized IMAC EasyTips in extracting the signal of tryptic phosphopeptides of beta-casein (10 pmol) having one and four phosphorylation sites by using an IMAC EasyTip prior to off-line analysis by MS. The combination of IMAC EasyTips and MALDI-MS allowed the unambiguous identification of phosphopeptides based on the phosphatase assay as well as the post-source decay. Compared to other miniaturized devices, this fabrication method is simple, cheap, and requires less human intervention. Moreover, the method of manipulating the EasyTips is straightforward and can be automated readily by a robotic system for high-throughput analysis.     

Novel nanomaterials used for sample preparation for protein analysis

Sample preparation is of vital importance for proteomic analysis because of the high complexity of biological samples. The rapid development of novel nanomaterials with various compositions, morphologies, and proper surface modifications provides a category of powerful tools for the sample preparation for protein analysis. In this paper, we have summarized recent progresses for the applications of novel nanomaterials in sample preparation for the analysis of proteomes, especially for phosphoproteomes, glycoproteomes, and peptidoms. Several kinds of novel nanomaterials were also discussed for their use in other kinds of proteomics analysis.

Determination of trace elements in biological materials using tetramethylammonium hydroxide for sample preparation

A method to prepare milk powder, bovine liver and bovine muscle samples for analysis by electrothermal atomic absorption spectrometry (ETAAS) is proposed. Samples are mixed with a small amount of tetramethylammonium hydroxide (TMAH) and a stable and homogeneous slurry is produced in ca. 2 h with heating at 60–70 °C. After such sample preparation and dilution with water, trace elements are determined in certified reference materials. Pyrolysis and atomisation temperatures are optimised for each element, and several modifiers are investigated. External calibration is used for every analyte. Limits of detection (LODs), precision and accuracy are reported for Cd, Pb, Ni, Cr, Cu and Ag and compared with those obtained after conventional acid digestion. The main advantages of the proposed method are the simplicity of sample preparation and the longer lifetime of the graphite tube.     

Improved sample preparation for CE-LIF analysis of plant N-glycans

In view of glycomics studies in plants, it is important to have sensitive tools that allow one to analyze and characterize the N-glycans present on plant proteins in different species. Earlier methods combined plant-based sample preparations with CE-LIF N-glycan analysis but suffered from background contaminations, often resulting in non-reproducible results. This publication describes a reproducible and sensitive protocol for the preparation and analysis of plant N-glycans, based on a combination of the 'in-gel release method' and N-glycan analysis on a multicapillary DNA sequencer. Our protocol makes it possible to analyze plant N-glycans starting from low amounts of plant material with highly reproducible results. The developed protocol was validated for different plant species and plant cells.     

An innovative sample preparation procedure for trace and ultra-trace analysis on non-conducting powders by direct current glow discharge mass spectrometry

A novel preparation procedure has been developed in order to obtain stable, pin-shaped samples for the elemental analysis of non-conducting powders by direct current glow discharge mass spectrometry (dc GDMS): up to now, this technique has been mainly used for the characterization of metals and semiconductors. This work deals with a particular analytical application of the infiltration process, which is frequently employed for producing metal-matrix composites (MMC) for structural applications. The preparation procedure has been tested on germanium dioxide GeO₂, an inorganic compound available as high-purity powder. However, the method is, in principle, of general applicability: considering the quality of the results obtained so far, it might be particularly suitable for the detection of traces in powdered, non-conducting materials such as ceramics, bio-inorganics, soils, sediments and for the quantitation of major and minor elements in cases where limited amounts of samples are available (e.g. archaeological findings). The reproducibility of the preparation process is satisfactory: repeated observations by reflected light microscopy (RLM) prove that the oxide grains are homogeneously distributed within a well bounded region of the metallic host matrix. The use of composite pin-shaped samples leads to a rapid stabilization of the plasma discharge, with the consequence that the analytical results are generally superior to those obtained on similar samples prepared by more conventional procedures. In particular, from the ratio of the signals due to Ge⁺ and GeO⁺, it can be seen that a large predominance of the former species is quickly established in the plasma, with a correspondingly fast achievement of high detection sensitivities.     

Acoustic levitation device for sample pretreatment in microanalysis and trace analysis

A sample preparation device for microanalysis and trace analysis based on acoustic levitation is described. Derivatization can be performed in a single levitated drop as part of the sample pretreatment in an analytical procedure. The applicability of the experimental setup is demonstrated. First results of the preconcentration of hexachlorobenzene are given. Received: 20 August 1999 / Accepted: 7 September 1999     

Acoustic levitation device for sample pretreatment in microanalysis and trace analysis

A sample preparation device for microanalysis and trace analysis based on acoustic levitation is described. Derivatization can be performed in a single levitated drop as part of the sample pretreatment in an analytical procedure. The applicability of the experimental setup is demonstrated. First results of the preconcentration of hexachlorobenzene are given.     

复杂样品痕量极性小分子化合物的样品前处理及分析方法研究进展

核苷、胺、氨基酸等极性小分子化合物是生物、食品、环境等领域重要的研究对象,但各种复杂基体中痕量极性小分子的分离分析需要高效的前处理介质和技术以及快速灵敏的分析方法。本文综述了硅胶材料、有机聚合物、炭材料和硼酸材料等样品前处理分离介质及反相液相色谱、亲水作用色谱等分析方法在复杂样品痕量极性小分子化合物分析中的应用,并展望了其发展趋势。     

Recent developments in sample preparation for chromatographic analysis of carbohydrates

Carbohydrates are a very important group of compounds due to their roles as structural materials, sources of energy, biological functions and environmental analytes; they are characterized by their structural diversity and the high number of isomers they present. While many advances have been made in carbohydrate analysis, the sample preparation remains difficult. This review aims to summarize the most important treatments which have been recently developed to be applied prior to the analysis of carbohydrates by chromatographic techniques. Due to the multiplicity of structures and matrices, many different techniques are required for clean-up, fractionation and derivatization. A number of new techniques which could be potentially adequate for carbohydrate characterization have also been revised.     

Fiber-packed needle-type sample preparation device designed for gas chromatographic analysis

A miniaturized sample preparation technique that uses a fine-fiber-packed needle as the extraction medium is reviewed, especially in relation to its application to the analysis of volatile organic compounds by gas chromatography. When the needle was packed longitudinally with a bundle of fine filaments (12 μm o.d.) which were also surface-coated with polymeric materials, successful sample preconcentration was obtained. Improved sensitivity was also established by introducing simultaneous derivatization reactions into the extraction process in the fiber-packed needle. The storage performance of the needle clearly demonstrated the potential of the technique for typical on-site sampling during environmental analysis. In this short review, the fiber-packed extraction needle developed by the authors is summarized along with applications that use the fiber-packed needle as a miniaturized extraction device.     

Advanced porous organic materials for sample preparation in pharmaceutical analysis

The development of novel sample preparation media plays a crucial role in pharmaceutical analysis. To facilitate the extraction and enrichment of pharmaceutical molecules in complex samples, various functionalized materials have been developed and prepared as adsorbents. Recently, some functionalized porous organic materials have become adsorbents for pharmaceutical analysis due to their unique properties of adsorption and recognition. These advanced porous organic materials, combined with consequent analytical techniques, have been successfully used for pharmaceutical analysis in complex samples such as environmental and biological samples. This review encapsulates the progress of advanced porous materials for pharmaceutical analysis including pesticides, antibiotics, chiral drugs, and other compounds in the past decade. In addition, we also address the limitations and future trends of these porous organic materials in pharmaceutical analysis.     

Theoretical models for electrodialytic sample treatment in trace analysis by liquid chromatography

Summary Basic considerations for analyte enrichment and recovery obtainable by electrodialysis as a sample treatment method are given. Equations are derived which describe the dependence of the concentration profiles of ionic compounds on the electric field strength in a set-up with stagnant donor and acceptor solutions. It is shown that analyte recovery increases when less ion-selective membranes are used in the electrodialysis cell. Computer models are used to estimate the analyte enrichment for a flowing donor (sample) and a stagnant acceptor phase. About 10-fold enrichment can be obtained in an electrodialytic sample treatment system within 20 min under maximum current conditions. A compromise has to be found between analyte recovery and the donor (sample) flow rate.     

Ultrafiltration for proteomic sample preparation

Proteome analysis represents significant challenges to the existing sample preparation techniques. Traditional methods, such as two-dimensional electrophoresis, typically separate high-molecular-weight proteins while discarding low-molecular-weight species. This approach is well justified considering the complexity of any proteome. However, it is desirable to extract the maximum amount of information from each sample to investigate the entire range of biomolecules. We have demonstrated that ultrafiltration not only improves two-dimensional electrophoresis (2-DE) resolution of the protein fraction but also yields the low-molecular-weight fraction amenable for further analysis by high-resolution mass spectrometry. This approach was successfully adapted to the variety of biological samples including cell and tissue lysates and serum. Therefore, ultrafiltration offers an alternative sample preparation technique that enables more thorough analysis of a proteome.     

Focused-microwave-assisted strategies for sample preparation

In this work a general discussion is presented about extraction and digestion procedures, assisted by focused-microwave radiation. Applications involving inorganic, organic, and organometallic analytes in different types of samples are presented, taking into account recent literature data. The main advantages of using focused-microwave radiation are highlighted, such as safety, versatility, control of microwave energy released to the sample, and programmed addition of solutions. All these features can be applied properly in sample preparation for speciation analysis. New routes of development are discussed considering partial digestion by acid-vapor and gradual addition of a liquid sample to hot concentrated acids. Some preliminary results using these strategies are presented to demonstrate their potentiality.