A Functional Role for Aβ in Metal Homeostasis? N‐Truncation and High‐Affinity Copper Binding

Accumulation of the β‐amyloid (Aβ) peptide in extracellular senile plaques rich in copper and zinc is a defining pathological feature of Alzheimer′s disease (AD). The Aβ1–x (x=16/28/40/42) peptides have been the primary focus of Cu^II binding studies for more than 15 years; however, the N‐truncated Aβ4–42 peptide is a major Aβ isoform detected in both healthy and diseased brains, and it contains a novel N‐terminal FRH sequence. Proteins with His at the third position are known to bind Cu^II avidly, with conditional log K values at pH 7.4 in the range of 11.0–14.6, which is much higher than that determined for Aβ1–x peptides. By using Aβ4–16 as a model, it was demonstrated that its FRH sequence stoichiometrically binds Cu^II with a conditional K_d value of 3×10^?14 M at pH 7.4, and that both Aβ4–16 and Aβ4–42 possess negligible redox activity. Combined with the predominance of Aβ4–42 in the brain, our results suggest a physiological role for this isoform in metal homeostasis within the central nervous system.     

Organocatalytic Enantioselective Oxidative C?H Alkenylation and Arylation of N‐Carbamoyl Tetrahydropyridines and Tetrahydro‐β‐carbolines

The first organocatalytic enantioselective C H alkenylation and arylation reactions of N‐carbamoyl tetrahydropyridines and tetrahydro‐β‐carbolines (THCs) are described. The metal‐free processes represent an efficient and straightforward approach to a variety of structurally and electronically diverse α‐substituted tetrahydropyridines and THCs in good yields with excellent regio‐ and enantioselectivities. Preliminary control experiments provide important insights into the reaction mechanism.     

Practical Metal‐Free C(sp3)?H Functionalization: Construction of Structurally Diverse α‐Substituted N‐Benzyl and N‐Allyl Carbamates

Described is a practical and universal C H functionalization of readily removable N‐benzyl and N‐allyl carbamates, with a wide range of nucleophiles at ambient temperature promoted by Ph₃CClO₄. The metal‐free reaction has an excellent functional‐group tolerance, and displays a broad scope with respect to both N‐carbamates and nucleophile partners (a variety of organoboranes and C H compounds). The synthetic utility in target‐ as well as diversity‐oriented syntheses is demonstrated.     

How Strong Are Hydrogen Bonds in Metalla‐β‐diketones?

The energies of the kinetically inert, electronically saturated Lukehart-type metalla-beta-diketone [Re{(COMe)2H}(CO)4] (9 a) and of the kinetically labile, electronically unsaturated platina-beta-diketones [Pt{(COMe)2H}Cl2]- (10 a), [Pt2{(COMe)2H}2(micro-Cl)2] (11 a), and [Pt{(COMe)2H}(bpy)]+ (12 a) have been calculated by DFT at the B3LYP/6-311++G(d,p) level using effective core potentials with consideration of relativistic effects for the transition metals. Analogously, energies of the requisite open (non-hydrogen-bonded) equilibrium conformers (9 b, 10 c, 11 b, 12 b) and energies which were obtained from the hydrogen-bonded conformers by rigid rotation of the OH group around the C--O bond by 180 degrees followed by relaxation of all bond lengths and angles (9 c, 10 d, 11 c, 12 d) have been calculated. These energies were found to be higher by 14.7/27.2 (9 b/9 c), 20.7/27.2 (10 c/10 d), 19.2/25.7 (11 b/11 c), and 9.4/19.6 kcal mol(-1) (12 b/12 d) than those of the intramolecularly O--HO hydrogen-bonded metalla-beta-diketones 9 a, 10 a, 11 a, and 12 a, respectively. In acetylacetone (Hacac), the generic organic analogue of metalla-beta-diketones, the energies of the most stable non-hydrogen-bonded enol isomer (6 b) and of the conformer derived from the H-bonded form by rigid rotation of the OH group by 180 degrees followed by subsequent relaxation of all bond lengths and angles (6 k) were found to be 10.9/16.1 kcal mol(-1) (6 b/6 k) higher compared to the intramolecularly O--HO bonded isomer 6 a. Thus, the hydrogen bonds in metalla-beta- diketones must be regarded as strong and were found to be up to twice as strong as that in acetylacetone. A linear relationship was found between the hydrogen-bond energies based on the rigidly rotated structures and the OO separation in the hydrogen-bonded structures. Furthermore, these energies were also found to be correlated with the electron densities at the OH bond critical points (rhobcp) in the O--HO bonds of metalla-beta-diketones 9 a, 10 a, 11 a, and 12 a (calculated using the AIM theory). The comparison of the energies of the doubly intermolecularly hydrogen-bonded dinuclear platina-beta-diketone [{Pt{(COMe)2H}(bpy)}2]2+ (14) with that of the mononuclear intramolecularly hydrogen-bonded cation [Pt{(COMe)2H}(bpy)]+ (12 a) showed that the intermolecular hydrogen bonds in 14 are weaker than the intramolecular hydrogen bond in 12.     

Does α‐effect exist in E2 reactions? A G2(+) investigation

The gas-phase base-induced bimolecular elimination (E2) reactions at saturated carbon with 13 bases, B(-) + CH3CH2Cl --> BH + CH2=CH2 + Cl(-) (B = HO, CH3O, CH3CH2O, FCH2CH2O, ClCH2CH2O, Cl, Br, FO, ClO, BrO, HOO, HSO, and H2NO), were investigated with the high-level G2(+) theory. It was found that all alpha-bases with adjacent lone pair electrons examined exhibited downward deviations from the correlation line between the overall barriers and proton affinities for the normal bases without adjacent lone pair electrons, indicating the existence of the alpha-effect in the gas phase E2 reactions. The sizes of the alpha-effect for the E2 reaction, DeltaH(alpha)(E2), span a smaller range if the alpha-atoms are on the same column in the periodic table, in contrast to the corresponding S(N)2 reactions, where the DeltaH(alpha)(S(N)2) values significantly decrease from an upper to a lower column. The origin of the alpha-effects in E2 reactions can be interpreted by the favorable orbital interaction between the lone-pair electrons and positively charged anti-bonding orbital. It is worth noticing that the neighboring electron-rich pi lobe instead of lone pair electrons could also cause the alpha-effect in E2 reaction.     

Rare‐Earth‐Metal Alkylaluminates Supported by N‐Donor‐Functionalized Cyclopentadienyl Ligands: C?H Bond Activation and Performance in Isoprene Polymerization

Homoleptic tetramethylaluminate complexes [Ln(AlMe₄)₃] (Ln=La, Nd, Y) reacted with HCp^NMe2 (Cp^NMe2=1‐[2‐(N,N‐dimethylamino)‐ethyl]‐2,3,4,5‐tetramethyl‐cyclopentadienyl) in pentane at ?35 °C to yield half‐sandwich rare‐earth‐metal complexes, [{C₅Me₄CH₂CH₂NMe₂(AlMe₃)}Ln(AlMe₄)₂]. Removal of the N‐donor‐coordinated trimethylaluminum group through donor displacement by using an equimolar amount of Et₂O at ambient temperature only generated the methylene‐bridged complexes [{C₅Me₄CH₂CH₂NMe(μ‐CH₂)AlMe₃}Ln(AlMe₄)] with the larger rare‐earth‐metal ions lanthanum and neodymium. X‐ray diffraction analysis revealed the formation of isostructural complexes and the C? H bond activation of one aminomethyl group. The formation of Ln(μ‐CH₂)Al moieties was further corroborated by ¹³C and ¹H‐¹³C HSQC NMR spectroscopy. In the case of the largest metal center, lanthanum, this C? H bond activation could be suppressed at ?35 °C, thereby leading to the isolation of [(Cp^NMe2)La(AlMe₄)₂], which contains an intramolecularly coordinated amino group. The protonolysis reaction of [Ln(AlMe₄)₃] (Ln=La, Nd) with the anilinyl‐substituted cyclopentadiene HCp^AMe2 (Cp^AMe2=1‐[1‐(N,N‐dimethylanilinyl)]‐2,3,4,5‐tetramethylcyclopentadienyl) at ?35 °C generated the half‐sandwich complexes [(Cp^AMe2)Ln(AlMe₄)₂]. Heating these complexes at 75 °C resulted in the C? H bond activation of one of the anilinium methyl groups and the formation of [{C₅Me₄C₆H₄NMe(μ‐CH₂)AlMe₃}Ln(AlMe₄)] through the elimination of methane. In contrast, the smaller yttrium metal center already gave the aminomethyl‐activated complex at ?35 °C, which is isostructural to those of lanthanum and neodymium. The performance of complexes [{C₅Me₄CH₂CH₂NMe(μ‐CH₂)AlMe₃}‐ Ln(AlMe₄)], [(Cp^AMe2)Ln(AlMe₄)₂], and [{C₅Me₄C₆H₄NMe(μ‐CH₂)AlMe₃}Ln(AlMe₄)] in the polymerization of isoprene was investigated upon activation with [Ph₃C][B(C₆F₅)₄], [PhNMe₂H][B(C₆F₅)₄], and B(C₆F₅)₃. The highest stereoselectivities were observed with the lanthanum‐based pre‐catalysts, thereby producing polyisoprene with trans‐1,4 contents of up to 95.6 %. Narrow molecular‐weight distributions (M_w/M_n<1.1) and complete consumption of the monomer suggested a living‐polymerization mechanism.     

α,β‐Unsaturated and Saturated Derivatives of Be,Mg, and Ca: Are They Carbon or Metal Acids in the Gas Phase?

The gas-phase acidity of R--XH (R=H, CH(3), CH(2)CH(3), CH==CH(2), C[triple chemical bond]CH; X=Be, Mg, Ca) alkaline-earth-metal derivatives has been investigated through the use of high-level CCSD(T) calculations by using a 6-311+G(3df,2p) basis set. BeH(2) is a stronger acid than BH(3) and CH(4) for two concomitant reasons: 1) the dissociation energy of the Be--H bond is smaller than the dissociation energies of the B--H and C--H bonds, and 2) the electron affinity of BeH(.) is larger in absolute value than those of BH(2) (.) and CH(3) (.). The acidity also increases on going from BeH(2) to MgH(2) due to these two same factors. Quite importantly, despite the fact that the X--H bonds in the R--XH (X=Mg, Ca) derivatives exhibit the expected X(delta+)--H(delta-) polarity, they behave as metal acids in the gas phase and only Be derivatives behave as carbon acids in the gas phase. The ethylberyllium hydride exhibits an unexpected high acidity compared with the methyl derivative because deprotonation of the system is accompanied by a cyclization that stabilizes the anion. Similarly to that found for derivatives that contain heteroatoms from groups 14, 15, and 16, the unsaturated compounds are stronger acids than the saturated counterparts, with the only exception of the Ca-vinyl derivative. Most importantly, among ethyl, vinyl, and ethynyl derivatives containing a heteroatom of the main group of the Periodic Table, those containing Be, Mg, and Ca are among the strongest gas-phase acids.     

Redox‐Triggered C?C Coupling of Diols and Alkynes: Synthesis of β,γ‐Unsaturated α‐Hydroxyketones and Furans by Ruthenium‐Catalyzed Hydrohydroxyalkylation

Direct ruthenium‐catalyzed C C coupling of alkynes and vicinal diols to form β,γ‐unsaturated ketones occurs with complete levels of regioselectivity and good to complete control over the alkene geometry. Exposure of the reaction products to substoichiometric quantities of p‐toluenesulfonic acid induces cyclodehydration to form tetrasubstituted furans. These alkyne‐diol hydrohydroxyalkylations contribute to a growing body of merged redox‐construction events that bypass the use of premetalated reagents and, hence, stoichiometric quantities of metallic by‐products.     

Large‐scale molecular dynamics simulations of HLA‐A*0201 complexed with a tumor‐specific antigenic peptide: Can the α3 and β2m domains be neglected?

Large-scale massively parallel molecular dynamics (MD) simulations of the human class I major histocompatibility complex (MHC) protein HLA-A*0201 bound to a decameric tumor-specific antigenic peptide GVYDGREHTV were performed using a scalable MD code on high-performance computing platforms. Such computational capabilities put us in reach of simulations of various scales and complexities. The supercomputing resources available for this study allow us to compare directly differences in the behavior of very large molecular models; in this case, the entire extracellular portion of the peptide-MHC complex vs. the isolated peptide binding domain. Comparison of the results from the partial and the whole system simulations indicates that the peptide is less tightly bound in the partial system than in the whole system. From a detailed study of conformations, solvent-accessible surface area, the nature of the water network structure, and the binding energies, we conclude that, when considering the conformation of the alpha1-alpha2 domain, the alpha3 and beta2m domains cannot be neglected.     

Targeting RNA G‐Quadruplex in SARS‐CoV‐2: A Promising Therapeutic Target for COVID‐19?

The COVID‐19 pandemic caused by SARS‐CoV‐2 has become a global threat. Understanding the underlying mechanisms and developing innovative treatments are extremely urgent. G‐quadruplexes (G4s) are important noncanonical nucleic acid structures with distinct biofunctions. Four putative G4‐forming sequences (PQSs) in the SARS‐CoV‐2 genome were studied. One of them (RG‐1), which locates in the coding sequence region of SARS‐CoV‐2 nucleocapsid phosphoprotein (N), has been verified to form a stable RNA G4 structure in live cells. G4‐specific compounds, such as PDP (pyridostatin derivative), can stabilize RG‐1 G4 and significantly reduce the protein levels of SARS‐CoV‐2 N by inhibiting its translation both in vitro and in vivo. This result is the first evidence that PQSs in SARS‐CoV‐2 can form G4 structures in live cells, and that their biofunctions can be regulated by a G4‐specific stabilizer. This finding will provide new insights into developing novel antiviral drugs against COVID‐19.