QQ-HSQC: a quick, quantitative heteronuclear correlation experiment for NMR spectroscopy

Quantitative heteronuclear single quantum coherence (Q-HSQC) is a variant of the HSQC experiment that provides quantitative peak areas. This is accomplished by combining signals acquired using four different INEPT delays. Consequently, the experiment requires four times as many scans as the HSQC experiment to achieve the same resolution in the indirect dimension. We have removed this drawback by modifying the Q-HSQC experiment so that signals corresponding to different INEPT delays are acquired simultaneously from different parts of the sample. This new experiment, which we call Quick, Quantitative HSQC (QQ-HSQC), has the quantitative properties of the Q-HSQC experiment but only requires as many scans as a conventional HSQC experiment.     

六氟磷酸二(4,4'-二甲基-2,2'-联吡啶)·(2,2'-联吡啶-4,4'-二羧酸)合钌(Ⅱ)的二维核磁共振

用1H NMR和13C NMR谱研究了新型电化学发光探针六氟磷酸二(4,4'-二甲基-2,2'-联吡啶)·(4,4'-二羧酸-2,2'-联吡啶)合钌(Ⅱ)的立体结构,通过1H-1H COSY、13C-1H HETCOR谱对其氢谱和碳谱中的各谱峰进行了归属,并给出了氢谱和碳谱峰的化学位移值.     

基于~1H-NMR、~(31)P-NMR的三苯基膦三间磺酸钠定量分析研究

该文建立了三苯基膦三间磺酸钠(TPPTS)的核磁氢谱(~1H-NMR)、核磁磷谱(~(31)P-NMR)、定量分析方法。通过~1H-NMR、~(13)C-NMR、~(31)P-NMR并结合~1H-~1H COSY、~1H-~(13)C、~1H-~(13)C HMBC对TPPTS的氢原子、碳原子以及磷原子的化学位移进行归属;氢谱定量选用三■烷作内标、氘代N,N-二甲基甲酰胺(DMF-D_7)作溶剂,磷谱定量选用KH_2PO_4作内标、氘代水(D_2O-D_2)作溶剂,通过对混合体系中各自旋核纵向弛豫时间(T1)的测定,为弛豫延迟时间(D1)的合理设置提供依据。以上两种方法对体系中TPPTS的定量分析结果分别为(58.72±0.21)%、(58.51±0.21)%,测定结果一致性高、平行性好,且检测过程无需待测组分的标准品,能实现TPPTS含量的快速准确测定。     

Precise Molecular Weight Determination and Structure Characterization of End-functionalized Polymers: An NMR Approach via Combination of One-dimensional and Two-dimensional Techniques

We present here the application of one-dimensional and two-dimensional NMR techniques to characterize the structure of methoxyl end-functionalized polystyrenes (PS).The peaks in 1H-NMR spectra corresponding to main-chain,side-chain and chain-end groups are assigned by 1H-1H gCOSY,1H-13C gHSQC and gHMBC spectra.For the first time,the spin-lattice relaxation time (T1) of protons of the chain-ends is revealed to be affected more by polymer molecular weight (MW) than by the protons of the main-chains and the side-chains (almost independent from MW).As a result,a much higher delay time (d1) for chain-ends (d1 ＞ 20T1) is needed for quantitative NMR measurement when using end-group estimation method to obtain the MW of PS,which is in accordance with the value estimated by GPC.An improved method for the polymer MW determination is established,by combination of different NMR techniques to distinguish the peaks,and a large dl setting to achieve quantitative NMR analysis.     

六氟磷酸二(2,2'-联吡啶)·(4,4'-二甲基-2,2'-联吡啶) 合钌(Ⅱ)的二维核磁共振谱分析

用一维NMR方法研究了电化学发光物质六氟磷酸二(2,2'-联吡啶)·(4,4'-二甲基-2,2'-联吡啶)合钌(Ⅱ)的立体结构,借助二维1H-1H COSY和1H-13C COSY实验技术对其氢谱和碳谱进行了完全的归属,并给出了其氢谱和碳谱的化学位移值.     

Inverse H-C ex situ HRMAS NMR experiments for solid-phase peptide synthesis

The growing importance of solid-phase peptide synthesis (SPPS) has necessitated the development of spectroscopic experiments that can be used to obtain structural and conformational information on resin-bound peptides. Despite the utility of two-dimensional high-resolution magic angle spinning (HRMAS) NMR experiments that provide homonuclear shift correlations, experiments that provide heteronuclear shift correlations are necessary for complex conformational and structural elucidatory problems. Here we report the optimization and implementation of non-gradient inverse NMR experiments for acquiring the 1H-13C shift correlations of resin-bound peptides. The use of non-gradient experiments is advantageous as many magic angle spinning (MAS) probes do not possess gradient coils. An HRMAS BIRD-HMQC experiment with a reduced 1JCH constant has proven very suitable for obtaining one-bond correlations. Long-range correlations can be interpolated by using a non-gradient HRMAS CT-HMBC-1 experiment where the resulting data is processed with forward linear prediction. It has been shown that removing the effects of 1H-1H J-modulation is crucial in order to view cross peaks that correspond to long-range correlations. Additionally, both experiments prove extremely useful over routine one-dimensional 13C HRMAS experiments for extracting carbon chemical shift data. The non-gradient HRMAS BIRD-HMQC and CT-HMBC-1 experiments can be used to assist in conformational analysis and to identify and deconvolute situations where accidental equivalence and seemingly correlated isochronous signals arise.     

Observation of individual transitions in magnetically equivalent spin systems

Individual transitions of magnetically equivalent spin systems such as methyl groups residing on isotropically tumbling molecules in solution usually cannot be observed as multiplet-split NMR lines. We propose a pair of NMR experiments, 2D [13C,1Halphaalpha]Methyl and [13C,1Hbetabeta]Methyl HSQC, to overcome this limitation and enable direct and selective observation of individual 1H transitions in 13C-labeled methyl spin systems. Immediate applications include quantitative measurements of 1H-1H residual dipolar couplings (RDC) and cross-correlated relaxation between 1H chemical shift anisotropy and 1H-1H dipole-dipole interactions. The use of the experiments for the measurement of RDCs is demonstrated with two proteins, one weakly aligned by means of Pf1 phages and the other using a naturally present paramagnetic heme group.     

Metabolic profile of lettuce leaves by high-field NMR spectra

A detailed analysis of the proton high-field NMR spectra of aqueous and organic extracts of lettuce leaves is reported for the first time. A combination of COSY, TOCSY, (1)H-(13)C HSQC, (1)H-(13)C HMBC bidimensional sequences and DOSY was used to assign each spin system and to separate the components of the complex patterns. A large number of water-soluble metabolites belonging to different classes such as carbohydrates, polyols, organic acids and amino acids were fully assigned. Moreover, the complex spectra of metabolites extracted in organic solvents belonging to sterols, fatty acids, diacylglycerophospholipids, galactosyldiacylglycerols, sulpholipids, pheophytins, carotenoids and hydrocarbons were also assigned.     

Simultaneous de novo identification of molecules in chemical mixtures by doubly indirect covariance NMR spectroscopy

The detailed characterization of complex molecular mixtures plays a key role in many areas of modern Chemistry. Here we report a novel NMR spectroscopic method that deconvolutes a complex mixture of organic molecules simultaneously into individual components and depicts their chemical structure without requiring physical separation of the components. Doubly indirect covariance spectroscopy is introduced and applied to 2D (13)C-(1)H HSQC and 2D (1)H-(1)H COSY spectra, which results in a (13)C-(13)C 2D spectrum with unprecedented high resolution. This reconstituted spectrum is indeed a carbon-connectivity map that can be directly analyzed with basic graph theory to obtain the skeletal structures of individual mixture components or their fragments. The method is demonstrated for a model mixture and a natural product mixture extracted from cancer cells. Its suitability for automation makes this approach attractive for the analysis of a broad range of mixtures of natural or synthetic products.     

Determination of multiple torsion-angle constraints in U-(13)C,(15)N-labeled peptides: 3D (1)H-(15)N-(13)C-(1)H dipolar chemical shift NMR spectroscopy in rotating solids

We demonstrate constraint of peptide backbone and side-chain conformation with 3D (1)H-(15)N-(13)C-(1)H dipolar chemical shift, magic-angle spinning NMR experiments. In these experiments, polarization is transferred from (15)N[i] by ramped SPECIFIC cross polarization to the (13)C(alpha)[i], (13)C(beta)[i], and (13)C(alpha)[i - 1] resonances and evolves coherently under the correlated (1)H-(15)N and (1)H-(13)C dipolar couplings. The resulting set of frequency-labeled (15)N(1)H-(13)C(1)H dipolar spectra depend strongly upon the molecular torsion angles phi[i], chi1[i], and psi[i - 1]. To interpret the data with high precision, we considered the effects of weakly coupled protons and differential relaxation of proton coherences via an average Liouvillian theory formalism for multispin clusters and employed average Hamiltonian theory to describe the transfer of (15)N polarization to three coupled (13)C spins ((13)C(alpha)[i], (13)C(beta)[i], and (13)C(alpha)[i - 1]). Degeneracies in the conformational solution space were minimized by combining data from multiple (15)N(1)H-(13)C(1)H line shapes and analogous data from other 3D (1)H-(13)C(alpha)-(13)C(beta)-(1)H (chi1), (15)N-(13)C(alpha)-(13)C'-(15)N (psi), and (1)H-(15)N[i]-(15)N[i + 1]-(1)H (phi, psi) experiments. The method is demonstrated here with studies of the uniformly (13)C,(15)N-labeled solid tripeptide N-formyl-Met-Leu-Phe-OH, where the combined data constrains a total of eight torsion angles (three phi, three chi1, and two psi): phi(Met) = -146 degrees, psi(Met) = 159 degrees, chi1(Met) = -85 degrees, phi(Leu) = -90 degrees, psi(Leu) = -40 degrees, chi1(Leu) = -59 degrees, phi(Phe) = -166 degrees, and chi1(Phe) = 56 degrees. The high sensitivity and dynamic range of the 3D experiments and the data analysis methods provided here will permit immediate application to larger peptides and proteins when sufficient resolution is available in the (15)N-(13)C chemical shift correlation spectra.     

1H-1H dipolar couplings provide a unique probe of RNA backbone structure

A NMR method is described that permits simultaneous measurement of the geminal 2JH1H2 + 2DH1H2 splitting and the sum of the 1JCH1 + 1DCH1 + 1JCH2 + 1DCH2 couplings for methylene groups, where 2DH1H2 and 1DCH are residual dipolar couplings, occurring when molecules are weakly oriented relative to the magnetic field. By suppressing either the upfield or downfield half of the 1H-1H geminal doublet, the experiment yields improved resolution relative to regular two-dimensional 1H-13C correlation spectra, making it applicable to systems of considerable complexity. The method is demonstrated for measurement of all 2DH5'H5' couplings in a 24-nucleotide 13C-enriched RNA stem loop structure, weakly aligned in liquid crystalline Pf1. The method is equally applicable to methylene groups in 13C-labeled proteins and to natural abundance samples of smaller molecules.     

On the structure of carotenoid iodine complexes

Previous work on carotenoid-iodine complexes is briefly reviewed. The formation of iodine complexes of beta,beta-carotene and of (3R,3' R )-beta,beta-carotene-3,3'-diol (zeaxanthin) has been studied by modern methods including UV/VIS/NIR, IR MS, EPR, ENDOR and NMR (1H, 1H-1H COSY, TOCSY, 2D ROESY, 1H-13C HSQC and 1H-13C HMBC) spectroscopy, and chemical reactions monitored by HPLC, TLC and spectral analysis (VIS, MS, 1H NMR). beta,beta-Carotene formed a solid complex C40H56 x 4I with iodine in hexane and a solvent complex with lambdamax 1010 nm in chlorinated solvents. Iodine was not covalently bound to the carotene. Spectroscopic and chemical evidence is consistent with the representation of the beta,beta-carotene-iodine complex containing iodine in a pi complex with cationic/radical cationic properties. Extensive E/Z isomerisation was noted for all quenching products obtained in acetone, with thiosulfate, by dilution, or by reaction with nucleophile (MeOH). Key products obtained from the beta,beta-carotene-iodine complex were 4',5'-didehydro-4,5'-retro-beta,beta-carotene (isocarotene) and 4-methoxy-beta,beta-carotene. The zeaxanthin-iodine complex was not suitable for a practical synthesis of (3S,3'S)-4',5'-didehydro-4,5'-retro-beta,beta-carotene-3,3'-diol (eschscholtzxanthin).     

A new bis(1-naphthylimino)acenaphthene compound and its Pd(II) and Zn(II) complexes: synthesis, characterization, solid-state structures and density functional theory studies on the syn and anti isomers

A new rigid bidentate ligand, bis(1-naphthylimino)acenaphthene, L1, and its Zn(II) and Pd(II) complexes [ZnCl 2( L1)], 1, and [PdCl 2( L1)], 2, were synthesized. L1 was prepared by the "template method", reacting 1-naphthyl amine and acenaphthenequinone in the presence of ZnCl 2, giving 1, which was further demetallated. Reaction of 1-naphthyl amine with acenaphthenequinone and PdCl 2 afforded dichloride bis(1-naphthyl)acenaphthenequinonediimine palladium, 2. L1, 1, and 2 were obtained as a mixture of syn and anti isomers. Compound 2 was also obtained by the reaction of PdCl 2 activated by refluxing it in acetonitrile followed by the addition of L1; by this route also a mixture of syn and anti isomers was obtained, but at a different rate. The solid-state structures of L1 and the anti isomer of compound 2 have been determined by single-crystal X-ray diffraction. All compounds have been characterized by elemental analyses; matrix-assisted laser desorption ionization-time-of-flight-mass spectrometry; IR; UV-vis; (1)H, (13)C, and (1)H- (1)H correlation spectroscopy; (1)H- (13)C heteronuclear single quantum coherence; (1)H- (13)C heteronuclear single quantum coherence-total correlation spectroscopy; and (1)H- (1)H nuclear Overhauser effect spectrometry NMR spectroscopies when applied. Density functional theory studies showed that both conformers for [PdCl 2(BIAN)] are isoenergetic, and they can both be obtained experimentally. However, we can predict that the isomerization process is not available in a square-planar complex, but it is possible for the free ligand. The molecular geometry is very similar in both isomers, and only different orientations for naphthyl groups can be expected.     

Mass spectrometry assisted assignment of NMR resonances in reductively 13C-methylated proteins

Reductive 13C-methylation of proteins has been used as an isotope labeling strategy to study protein structure, function, and dynamics by nuclear magnetic resonance (NMR) spectroscopy. However, assigning the resulting 13C-dimethylamine peaks in a 1H-13C NMR spectrum has proved to be difficult, but it is important to expand the scope of the method. The assignment strategy presented here utilizes mass spectrometry (MS) for sequence identification and varying 13C/12C isotope ratios to correlate with NMR data. The site-specific reactivity of the lysines and N-terminal amine of a protein is exploited to produce a sample with varying 13C/12C ratios at each dimethylamine. MS and NMR are used to quantitate and correlate these ratios in order to assign peaks in the 1H-13C NMR spectrum. Hen egg white lysozyme was used as a model protein to demonstrate this assignment strategy.     

Interaction of the human prion PrP(106-126) sequence with copper(II), manganese(II), and zinc(II): NMR and EPR studies

The synthetic peptide encompassing residues 106-126 (PrP106-126, KTNMKHMAGAAAAGAVVGGLG) of the human prion protein was considered for its binding properties toward copper(II), manganese(II) and zinc(II) at pH 5.7. 1H and 13C 1D spectra, 1H spin-lattice relaxation rates, and 1H-15N and 1H-13C HSQC 2D experiments were obtained in the absence and in the presence of metal ions. While Zn(II) was found to yield negligible effects upon any NMR parameter, metal-peptide association was demonstrated by the paramagnetic effects of Cu(II) and Mn(II) upon 1D and 2D spectra. Delineation of structures of metal complexes was sought by interpreting the paramagnetic effect on 1H spin-lattice relaxation rates. Exchange of peptide molecules from the metal coordination sphere was shown to provide sizable contribution to the observed relaxation rates. Such contribution was calculated in the case of Cu(II); whereas the faster paramagnetic rates of peptide molecules bound to Mn(II) were determining spin-lattice relaxation rates almost exclusively dominated by exchange. Proton-metal distances were therefore evaluated in the case of the Cu(II) complex only and used as restraints in molecular dynamics calculations where from the structure of the complex was obtained. The peptide was shown to bind copper through the imidazole nitrogen and the ionized amide nitrogen of His-111 and the amino-terminal group with the terminal carboxyl stabilizing the coordination sphere through ionic interactions. The data were interpreted as to demonstrate that the hydrophobic C-terminal region was not affecting the copper-binding properties of the peptide and that this hydrophobic tail is left free to interact with other target molecules. As for the complex with Mn(II), qualitative information was obtained on carbonyl oxygens of Gly-124 and Leu-125, beyond the terminal Gly-126 carboxyl, being at close distance from the metal ion, that also interacts, most likely, through a hydrogen bond of metal-bound water, with the imidazole ring of His-111.     

The structural characterization of some palladium (Ⅱ) complexes of 1,10-phenanthroline and amino acids by NMR spectroscopy

The complexes [Pd(phen)(aa)]Cl.3H2O, where phen is 1,10-phenanthroline and aa is the anion of glycine (gly), .DL-alanine (ala), DL-serine (ser) or DL-asparagine (asn), were synthesized and characterized by spectroscopies. The NMR signals were assigned completely on the basis of the double irradiation, 1H-1H COSY and 1H-13C COSY techniques. In the 1H NMR spectra of phen in the complexes, the signals of 2-H and 9-H show upfield shifts 0.8-1 ppm, while the signals of 4-H and 3-H show downfield shifts or almost no shift, as compared to the free phen ligand, and the signal of 4-H appears in the lowest field. The signals of ring B which is trans to the carboxyl group show significant upfield shifts as compared to those of ring A. The probable structures were described on the basis of a metal-non-bonded hydrogen interaction, trons effect and ligand-ligand interaction. There may exist three conformation isomers in the [Pd(phen)(asn)]Cl.3H2O complex at room temperature. The preferred conformation isomer is about     

A new vanadium Schiff base complex as catalyst for oxidation of alcohols

The monoanionic bidentate Schiff base, N-(phenolyl)-benzaldimine (HL), has been employed to synthesize a new vanadium(IV) complex of general composition [VO(L)₂] (where L?=?O,?N donor of Schiff base). The ligand and complex have been fully characterized by elemental analyses, molar conductance data, FT-IR, ¹H- and ¹³C-NMR, and UV-Vis spectroscopies. Oxidation of alcohols to their corresponding aldehydes and ketones was conducted by this complex catalyst using Oxone as oxidant under biphasic reaction conditions (CH₂Cl₂/H₂O) and tetra-n-butylammonium bromide as phase transfer agent under air at room temperature.     

Conformational exchange in pimonidazole--a hypoxia marker

Pimonidazole is one of a series of nitroimidazole compounds that is widely used as a marker for qualitative and quantitative assessment of tumour hypoxia. We have observed a novel dynamic conformational exchange process in this molecule in aqueous solution. By a combination of 1H, 13C, two-dimensional 1H-1H EXchange SpectroscopY (EXSY) and spectral simulation, we unambiguously attribute the conformational exchange process to flipping of the six-membered heterocyclic ring.     

NMR Investigations of Inclusion Complexes between β-Cyclodextrin and Naphthalene/Anthraquinone Derivatives

A ¹H and ¹³C NMR study on the inclusion complex between β-cyclodextrin and naphthalene, 1,5-dichloronaphthalene and 9,10-anthraquinone was carried out in order to define the stoichiometry of the association and the possible conformations. The upfield variation of the chemical shifts from the protons locate inside the cavity (H-3, H-5) coupled with the downfield variation of the other protons which locate outer sphere of the β-CD (H-1, H-2, H-4 and H-6,6′) provided clear evidence of the inclusion phenomena. The NMR spectra revealed the formation of 1:1 inclusion complex in which aromatic ring of the guest is tightly held by the host cavity. The signal degeneration of ¹H & ¹³C NMR spectra still exist for naphthalene and 1,5-dichloronaphthalene upon complexation revealed a symmetrical conformation of the guest molecules in the cavity of β-cyclodextrin, respectively. However, in 9,10-anthraquinone, the signal degeneration of ¹H & ¹³C NMR spectra was removed upon complexation which revealed an unsymmetrical conformation of the guest molecule inside the cavity. According to theoretical calculations and NMR studies, the possible conformations of the inclusion complexes are given here.     

A novel Zn(II) complex based on 1H-1,2,3-benzotriazol-1-ylacetic acid and 1H-1,2,3-benzotriazole ligands: Synthesis, crystal structure, and photoluminescent property

A novel complex formulated as [Zn(HBTA)₂(L)₂] · 2H₂O (I), where HL = 1H-1,2,3-benzotriazol-l-ylacetic acid, HBTA = 1H-1,2,3-benzotriazole, has been synthesized and structurally characterized by single crystal X-ray diffraction. Complex I shows a mononuclear structure, which is assembled into 1D chain via intermolecular π…π interactions and N-H…O hydrogen bonds. Different chains are linked by C-H…O hydrogen bonds into 2D layer. The photoluminescence property of the complex has been investigated.