<Superscript>1</Superscript>H and<Superscript>13</Superscript>C chemical shift assignments and stereochemistry of matrine and oxymatrine

Matrine and oxymatrine were extracted fromSophora flavescens, and their¹H and¹³C nuclear magnetic resonances (NMR) were unambiguously assigned by a combination of different two-dimensional 2-D¹H-¹³C and¹H-¹H correlation experiments of HMQC, HMQC-TOCSY and MAXY. The technique of using those experiments to make the assignment of the heavily overlapped spectrum is demonstrated. The coupling constants of matrine were measured by 2-DJ-resolved spectrum and 1-D spectra extracted from the slices of 2-D MAXY spectrum. The stereochemistry of the titled compounds was established from the NMR spectroscopy.     

A DFT‐based exploration augmented by X‐ray and NMR of the stereoselectivity in the 1,3‐dipolar cycloaddition of 1‐pyrroline‐1‐oxide to methyl cinnamate and benzylidene acetophenone

A B3LYP/6–31G* study was carried out for the reactions of 1‐pyrroline‐1‐oxide (N1) with methyl cinnamate (E1) and benzylidene acetophenone (E2) for getting a quantitative rationalization of the experimental findings. The product ratios were determined by NMR studies of the crude reaction mixtures. The conformation and stereochemistry of the isolated cycloadducts were finally confirmed by 2D NMR and X‐ray diffraction. The endo/exo‐selectivities were predicted through the computation of activation parameters on the basis of assumed concerted mechanism. The regioselectivity and reactivity were amply predicted by local and global electrophilicity indices and were found to be in good agreement with the experimental findings which were supportive of polar character and of the direction of charge transfer (CT) accompanying the cycloaddition. It was found that the cycloaddition involving methyl cinnamate was endo‐selective, while that with benzylidene acetophenone produced the exo‐isomer as the major adduct. Copyright © 2010 John Wiley & Sons, Ltd.     

Stereochemical Assignment of Tertiary Hydroxyl Group in Diterpene Furan Glycosides by Pyridine Induced Shifts, 13C- and 2D-NMR Spectroscopy

The stereochemistry of the tertiary hydroxyl group in diterpene furan glycosides viz. cordifolisides D (1) and cordifoliside E (2) has been assigned on the basis of pyridine solvent induced shifts (PIS) in the ¹H and ¹³C NMR spectra. The methyl and the methylene groups occupying positions vicinal, 1,3-diaxial and geminal to the tertiary hydroxyl group were deshielded to different extent depending on the dihedral angle. The stereochemical assignments are well supported by ¹³C-γ shifts and 2D Overhauser spectroscopy.     

Conformational analysis and inversion process in some perhydrodipyrido[1,2‐b;1′2′‐e]‐1,4,2,5‐ dioxadiazines

The stereoselectivity in the cyclodimerization of several six‐membered cyclic nitrones has been investigated. The configurational/conformational analysis of the dimers (i.e. perhydrodipyrido[1,2‐b;1′2′‐e]‐1,4,2,5‐dioxadiazines) has been carried out by NMR spectroscopy. The NMR spectra of the dimers at lower temperatures indicated the presence of either a single or two invertomer(s). The nitrogen inversion barriers are determined using complete line–shape analysis. The invertomer ratios have been used to estimate the relative energies associated with the cis and trans ring fusion in these tricycles. A mechanistic rationale for the observed stereochemistry of the dimerization process has been presented. Copyright © 2009 John Wiley & Sons, Ltd.     

Molecular Structure of the Eudesmanolide Septulinolide

The molecular structure of septuplinolide from Calea septuplinerva was determined by single crystal X-ray diffraction analysis. This requires revision of stereochemistry at C4 from 4β-OH to 4α-OH in the septuplinolide molecule. Also, high-field ¹H and ¹³C NMR spectral assignments of the lactone are given.     

The pressure-dependence of the dimerization of 1,3-butadiene: Experimental and theoretical volumes of activation and reaction

Abstract

The volume of activation found for the [4+2]-Diels-Alder cyclodimerization of 1,3-butadiene leading to 4-vinylcyclohexene turned out to be substantially lower than that found for the competing [2+2]-cyclodimerization leading to trans-divinylcyclobutane (ΔΔ₀ ^#= ?12cm³mol^?1). The [4+2]-cyclodimerization of Z, Z-1,4-dideuterio-l,3-butadiene shows only 3 % loss of stereochemistry at 1 bar and <1 % at 6.8–8.0 kbar. These findings show good evidence for a stereospecific pericylic Diels-Alder mechanism competing with a small amount of nonstereospecific stepwise reaction which is almost completely suppressed at high pressure. The volumes of activation and reaction for the various dimerization pathways of 1,3-butadiene are calculated by a Monte-Carlo computer simulation. The good agreeement between experimental and simulated data confirms the hypothesis that configurational effects (e.g. different packing of cyclic and acyclic states) are important for the explanation of activation and reaction volumes.     

Conformational and Structural Analysis of 6‐(4‐Methoxy‐phenyl)‐1,5,7a‐triphenyl‐tetrahydro‐imidazo[1,5‐b][1,2,4]oxadiazol‐2‐one

Abstract

The cis stereochemistry of 6‐(4‐methoxy‐phenyl)‐1,5,7a‐triphenyl‐tetrahydro‐imidazo[1,5‐b][1,2,4]oxadiazol‐2‐one was studied by use of a PM3 semi‐empirical quantum mechanical model, and x‐ray crystallographic analysis. It crystallizes in the monoclinic space group P2 ₁ /n with a = 10.812(1) Å, b = 16.464(2) Å, c = 13.379(1) Å, α = 90.00°, β = 98.39(1)°, γ = 90.00°, V = 2356.07(4) Å³, Z = 4, D _calc = 1.3067 g cm^?3, F(0 0 0) = 976.41, and μ = 0.086 mm^?1. The structure was solved by direct methods and refined to R = 0.066 for 1257 independent reflections [I > 4σ (I)]. The results from x‐ray diffraction were seen to be generally consistent with the results from previously reported spectroscopic investigations, beside theoretical calculations, except for conformations of five‐membered fused heterocycles. Two inter‐ and intramolecular weak interactions in addition to carbon atoms (C1 and C3) with different chiralities were found in the structure. The conformational study was performed by randomly scanning the potential energy surface belonging to the title compound with respect to selected torsion angles.     

恩替卡韦钠的核磁共振谱分析

对恩替卡韦钠进行了¹H和¹³C NMR检测,通过DEPT和¹H-¹H COSY、HMQC、HMBC等2D NMR技术对该化合物所有的¹H和¹³C NMR信号进行了全归属,并通过NOESY确证了其相对立体结构.     

Haem conformation of amphibian nytrosylhaemoglobins detected by XANES spectroscopy

We investigated for the first time the haem stereochemistry in the nitrosylated derivative of two amphibian haemoglobins, Xenopus laevis and Ambystoma mexicanum, by means of X-ray absorption spectroscopy technique with the aim to explain the relationships between the active site structure and physiological function of these proteins, compared to that from humans. Our results show that while the Fe site local structure of human HbNO is modulated by an allosteric effector such as IHP shifting the T-R equilibrium towards the T-state, the Fe site local structure of amphibians HbNO is stabilized in a particularly tensed T-state also without IHP.     

Synthesis and Structural Chemistry of 2,4-Dinitrosoresorcionl, 1-Nitroso-2-naphthol and 4-Carboxy-2-nitrosophenol

The stereochemistry of iron, cobalt, nickel and copper complexes derived from 2,4-dinitrosoresorcinol, 1-nitroso-2-naphthol and 4-carboxy-2-nitrosophenol was studied based on elemental analysis and spectral (UV-visible and IR) measurements. More information are obtained on their structures by means of differential thermal analysis (DTA) and electrical conductivity measurements. Empirical equations are deduced for the conduction of the ligands and their metal complexes. The thermodynamic parameters of thermal decomposition are evaluated Detailed Mössbauer spectra were recorded for the iron complexes.     

Note on the theory of dissociation pressures of gas hydrates

Couplings over four bonds, ⁴ J _HH, are discussed for compounds where stereochemistry is thought to be the dominant factor determining their values. A simple MO theory [3, 4] provides calculated coupling constants in agreement with experiment. The form of the theory permits an analysis of the mechanisms responsible for long-range coupling. The approach is generalized to include distorted cyclohexane fragments and these results are presented in a graphical form.     

海洋真菌中Actinopyrone A and C的分离与结构解析

应用各种层析手段（Sephadex LH-20,硅胶Silica和RP-8柱层析）,从海洋真菌发酵液中分离纯化了2个actinopyrone类化合物,结合多种波谱方法（HRESI-MS, 1D NMR, 2D NMR）,确定了它们的结构为：actinopyrone A 和 C. 利用NOESY试验确定了它们的相对构型,并根据HMBC数据纠正了这2个化合物C-21（H-21）位和C-22（H-22）位的化学位移.     

没药中一呋喃倍半萜的核磁共振研究

从没药氯仿提取物中分离得到一呋喃倍半萜类化合物：2-甲氧基-5-乙酰氧基呋喃吉马-1(10)E-烯-6-酮．通过1D NMR和2D NMR（¹H-¹H COSY,HSQC和HMBC）等技术确定了该化合物的结构,利用2D NMR技术对其核磁共振信号进行了全归属,修正了文献中的归属错误. 通过NOESY实验以及偶合常数的分析,确定了其结构中1,10位双键和甲氧基、乙酰氧基、 甲基等基团的相对构型.     

NOESY在立体化学研究中的某些应用

应用二维NOESY技术,对同分异构体1-4、顺反异构体5、6及两个环丙烷衍生物7、8在溶液中的构型、构象等立体化学问题进行了研究,并对化合物5-8进行了计算机分子模拟,取得与NOESY一致的结果.     

Stereochemical studies on pheromonal communications

Pheromonal communications are heavily dependent on the stereochemistry of pheromones. Their enantioselective syntheses could establish the absolute configuration of the naturally occurring pheromones, and clarified the unique relationships between absolute configuration and bioactivity. For example, neither the (R)- nor (S)-enantiomer of sulcatol, the aggregation pheromone of an ambrosia beetle, is behaviorally active, while their mixture is bioactive. Recent results as summarized in the present review further illustrate the unique and diverse relationships between stereochemistry and bioactivity of pheromones.     

Proton and Carbon‐13 NMR Studies of the Phencyclone Adducts of Medium Alkyl Chain‐Length N‐n‐Alkylmaleimides. Hindered Rotations and Magnetic Anisotropic Effects. Ab initio Calculations for Optimized Structures

Abstract

The Diels–Alder adducts, 3a–e, of phencyclone, 1, have been prepared from a series of N‐n‐alkylmaleimides, 2, with medium chain‐length n‐alkyl groups. The maleimides were obtained by cyclodehydration of the N‐n‐alkylmaleamic acids, 4, formed from reaction of maleic anhydride with the corresponding n‐alkylamines. The five adducts prepared included derivatives from n‐heptyl, 3a; n‐octyl, 3b; n‐nonyl, 3c; n‐decyl, 3d; and n‐dodecyl, 3e. The NMR spectra of the adducts were studied in CDCl₃ at ambient temperatures at 300 MHz for proton and 75 MHz for carbon‐13, with full proton assignments achieved by high‐resolution COSY45 spectra for the aryl and the alkyl regions. Slow exchange limit (SEL) spectra were observed for both ¹H and ¹³C spectra showing slow rotation on the NMR timescales of the unsubstituted bridgehead phenyl groups. Endo Diels–Alder adduct stereochemistry was supported by striking magnetic anisotropic shielding effects in the ¹H spectra of the alkyl groups, with the NCH₂ CH ₂ signal of each adduct appearing upfield of tetramethylsilane (TMS) at ca. ?0.32 ppm. Proton NMR spectra for precursor maleamic acids and maleimides are reported, with some solvent effects found (CDCl₃ vs. d ₆‐acetone) for the carbon‐bound HC?CH protons of 4. Ab initio molecular modeling calculations at the Hartree‐Fock level using the 6‐31G* basis set have been performed for two key conformers of the phencyclone adduct of N‐n‐octylmaleimide, as a representative structure for these hindered adducts, to estimate geometric parameters for the adduct. A syn conformer, with the alkyl chain directed into the adduct cavity, was found to be ca. 0.23 kcal/mol lower energy than an anti conformer (in which the alkyl chain was directed away from the phenanthrenoid moiety).     

Systematic conformational search analysis of the SRR and RRR epimers of 7‐hydroxymatairesinol

An extensive and systematic conformational search was performed on the two epimers of the natural lignan 7‐hydroxymatairesinol (HMR), by means of a home‐made Systematic Conformational Search Analysis (SCSA) code, designed to select more and more stable conformers through sequential geometry optimization of trial structures at increasing levels of calculation theory. In the present case, the starting molecular structures were selected by the semi‐empirical AM1 method and filtered – i.e. decreased in number by choosing the more stable species – on the basis of their energy calculated by the HF method and the 6‐31G(d) basis set. The geometries obtained were further refined by performing density functional theory (DFT) optimizations, using the B3LYP functional and the 6‐31G(d,p) basis set, both in vacuo and in ethanol solution. This procedure allowed us to isolate, at a high level of theory, three groups of epimer conformers characterized by open, semi‐folded, and folded conformations. Moreover, the SCSA allowed us to describe a conformational space made‐up by about 20 species for each of the two epimers. The corresponding energy content of these species was within 27 kJ mol^?1 from the absolute minimum found, both in vacuo and in ethanol solution. The conformational analysis, followed by the inspection of the stereochemistry of the two most stable conformers of both epimers, provides support in rationalizing the proposed reaction mechanism of the catalytic hydrogenolysis of the HMR to matairesinol (MAT). Copyright © 2009 John Wiley & Sons, Ltd.     

Complete Analysis of the 1H and 13C NMR Spectra of 5-Isopropylsulfonyl-2-Norbornenes Through the Application of Two-Dimensional NMR Techniques

Total assignment of ¹³C and ¹H NMR spectra of the 5-isopropylsulfonyl-2-norbornenes 2 was achieved using the concerted application of two-dimensional homonuclear and heteronuclear chemical shift correlations. The stereochemistry of both the diastereoisomers endo 2a and exo 2b have been established using the magnitude of the proton coupling constants.     

Spectroscopic and E. P. R Studies of the Crystal and Molecular Structure of Cu(2-Benzoylpyridine)2(NO3)2.H2O

Abstract

Solid Cu(2-Benzoylpyridine)₂(NO₃)₂ has been studied by UV-Vis, IR, and EPR (X-band, Q-band) techniques. Monoclinic crystal symmetry was determined with two molecules per unit cell. Copper (II) is coordinated by two benzoylpyridine ligands and a single NO₃ group in the chromophore CuN₂O₃ of distorted trigonal bypiramidal stereochemistry. Exchange coupling values were determined from EPR spectra as |J| = 0.0026(2) cm^?1 between magnetically nonequivalent copper (II) sites, and |J| < O.3 cm^?1 between equivalent sites.

Results are discussed by a comparison with Cu(II)-benzoyl-pyridine complexes coordinated with azide N₃ ^? anions.     

NMR spectra of 3β-hydroxy-5α-cholane derivatives,zymosterol synthesis intermediates

Proton and carbon resonances in NMR spectra of a number of derivatives of 3β-hydroxy-5α-cholanes, zymosterol synthesis intermediates, have been completely assigned using 2D NMR spectroscopy methods. The stereochemistry of the chiral centers and the structures of the molecules have been confirmed.