Polarized Infrared and Raman Spectra and Ab-initio Calculations of Benzotriazole

Abstract

The i. r. spectra of benzotriazole have been measured from 4000 to 60 cm^?1: polarized spectra of single crystals have been also obtained. The Raman spectra of polycrystalline samples and solutions have been investigated. The structural parameters and vibrational frequencies have been determined from ab-initio Hartree-Fock gradient calculations using the 6–31G* basis set. A detailed arsignment of most of the observed bands has been proposed on the basis of the i. r. dichroism, Raman polarization data and frequency calculations.

     

Polarized Infrared and Raman Spectra of 2(3H)-Benzoxazolone

Abstract

The infrared spectra of 2(3H)-benzoxazolone have been measured from 4000 to 180 cm^?1. The polarized spectra of single crystals have been also obtained. The Raman spectra of polycrystalline samples and solutions have been recorded and the polarization of many lines has been determined. On the basis of the i.r. dichroism, Raman spectra and correlative arguments most of the fundamental vibrations have been assigned.     

Conformational stability from Raman spectra,r0 structural parameters,and vibrational assignment of methylcyclohexane

The Raman spectra (3500–50 cm⁻¹) of the liquid and solid methylcyclohexane and the infrared spectra of the gas and solid methylcyclohexane have been recorded. The Raman band at 754 cm⁻¹ in the liquid has been confidently assigned to the less stable axial conformer and its intensity was recorded as a function of temperature from 25 to −95 °C. By the utilization of 15 different temperatures, the enthalpy difference between the more stable chair‐equatorial conformer and the chair‐axial form was determined to be 712 ± 71 cm⁻¹ (8.50 ± 0.84 kJ/mol). The ab initio predicted value of 710 cm⁻¹ (8.50 kJ/mol) from the MP2(full)/6‐311G(2d,2p) calculations with and without diffuse functions is in excellent agreement. The harmonic force fields, infrared intensities, Raman activities, depolarization ratios, and vibrational wavenumbers have been obtained for both conformers from MP2(full)/6‐31G(d) ab initio calculations. With two scaling factors of 0.88 for the C‐H stretches and 0.9 for the remaining ones, the fundamental wavenumbers have been predicted and along with the depolarization values and infrared band contours (B‐type for A″ modes) a complete vibrational assignment has been made for the chair‐equatorial conformer. Predicted r₀ structural parameters have been provided from adjusted parameters from ab initio MP2(full)/6‐311+G(d,p) calculations. The results are discussed and compared with the corresponding properties of some similar molecules. Copyright © 2009 John Wiley & Sons, Ltd.     

Conformational,vibrational, and structural studies of 2,2,3,3,3‐pentafluoropropylamine from Raman and infrared spectra of gas,liquid, xenon solutions,and solid supported by ab initio calculations

The Raman and infrared spectra (3500–50 cm⁻¹) of the gas, liquid or solution, and solid were recorded of 2,2,3,3,3‐pentafluoropropylamine (CF₃CF₂CH₂NH₂) and the ND₂ isotopomer. Variable temperature (−55 to − 100 °C) studies of the infrared spectra (3600–400 cm⁻¹) of samples dissolved in liquid xenon have been carried out. From these data, two of the five possible conformers have been identified and their relative stabilities obtained. The enthalpy difference was determined between the more stable Tt conformer and the less stable Tg form to be 280 ± 14 cm⁻¹ (3.35 ± 0.17 kJ/mol). The first indicator is the NCCC dihedral angle (G = gauche or T = trans), and the second one (g = gauche or t = trans) is the relative position of the lone pair of electrons on nitrogen with respect to the β‐carbon. The percentage of the Tg conformer at ambient temperature is estimated to be 34 ± 2%. The conformational stabilities have been predicted from ab initio calculations utilizing several different basis sets up to aug‐cc‐pVTZ for both MP2(full) and density functional theory calculations by the B3LYP method. Vibrational assignments have been provided for most of the observed bands for both isotopomers, supported by MP2(full)/6‐31G(d) ab initio calculations to predict the harmonic force fields, wavenumbers, infrared intensities, Raman activities, and depolarization ratios for both conformers. Estimated r₀ structural parameters were obtained from adjusted MP2(full)/6‐311 + G(d,p) calculations. The results are discussed and compared with the corresponding properties of some related molecules. Copyright © 2011 John Wiley & Sons, Ltd.     

A single‐crystal Raman and infrared study of the nonlinear optical crystal MBANP

Single‐crystal Raman and polycrystalline thin‐film infrared measurements have been obtained for the polar organic nonlinear optical material 2‐(α‐methylbenzylamino)‐5‐nitropyridine (MBANP). For comparison, thin‐film polycrystalline infrared measurements were also made on 2‐(α‐methylbenzylamino)‐3,5‐dinitropyridine (MBADNP). The long wavelength electronic absorption was measured in several solvents and as a thin solid film. The Raman spectra are dominated by three intense bands attributed to vibrations of the ring, the NO₂ substituent, and the N H bond. The most intense scattering and absorption arose from the α_bb component of the polarisability tensor. This implies that the most significant contribution to the transition polarisability arises from the electronic transition near 383 nm, polarised along the b‐axis of the crystal. The strongest bands in the infrared spectra are also associated with the same three bands, consistent with the predictions of the effective conjugation coordinate (ECC) theory, implying efficient electron–phonon coupling (or electronic delocalisation) in the conjugated system. DFT calculations of vibrational wavenumbers and eigenvectors were used to assign relevant vibrational features and to derive useful information about the molecular structure. This single‐crystal material is also a strong candidate for an efficient laser Raman converter with a large wavenumber shift of 3404 cm⁻¹ and a high damage threshold. Copyright © 2010 John Wiley & Sons, Ltd.     

Raman and Infrared Spectra of Crystals with the Cadmium Iodide Structure

Abstract

Raman and far infrared spectra (in the frequency range 20–360 cm^?1) have been recorded for polycrystalline samples of six crystals having the cadmium iodide layered structure. The four fundamental zone-center vibrational frequencies are assigned for CoBr₂, FeBr₂, MgBr₂, MnBr₂, CdI₂ and MgI₂. Values of the principal interlayer force constants are deduced from a simple linear chain dynamical model, and comparisons are made with recent results from spectroscopic studies of crystals with the related cadmium chloride structure.     

Vibrational analysis of 1-chlorooctane

The organic compound 1-chlorooctane exists in liquid state at ambient temperatures and has numerous synthetic applications. Fourier transform infrared and Raman spectra of this molecule have been recorded in the range of 4000−400 cm⁻¹ and 3500−200 cm⁻¹, respectively. A detailed vibrational analysis in terms of assignment of the observed frequencies of this molecule for its four most probable conformations in liquid phase, having symmetries C _s and C _l , has been done using normal co-ordinate calculations. The force-field transferred from already studied lower chain chloro-alkanes is subjected to refinement so as to fit the observed infrared and Raman frequencies with those of calculated ones. The potential energy distribution has also been calculated for each mode of vibration of the molecule for the most probable conformations present in its liquid phase.     

Ab Initio Calculations and Raman and SERS Spectral Analyses of Amphetamine Species

Abstract

For the first time, the differences between the spectra of amphetamine and amphetamine-H⁺ and between different conformers are thoroughly studied by ab initio model calculations, and Raman and surface-enhanced Raman spectroscopy (SERS) spectra are measured for different species of amphetamine. The spectra of amphetamine and amphetamine-H⁺ samples were obtained and assigned according to a comparison of the experimental spectra and the ab initio MO calculations, performed using the Gaussian 03W program (Gaussian, Inc., Pittsburgh, PA). The analyses were based on complete geometry minimization of the conformational energy of the S-plus-amphetamine molecule and the S-plus-amphetamine-H⁺ ion. The harmonic frequency calculations provide information about the characteristic features of the Raman spectra and the nature of the bonding in the molecule. It is concluded that vibrational bands from salt anions with internal bonds (sulfates, hydrogen phosphates, etc.) need to be taken into account when employing these spectra for identification purposes. These results also show how Raman spectroscopy can assist the forensic community in drug profiling studies. Furthermore, because their spectra are different, discrimination between the free and protonated forms of amphetamine salts can be observed. Here, we provide evidence for this difference and show experimentally how it has been overseen.     

Infrared and Raman Spectra,conformations, ab initio calculations and spectral assignments of 1,3‐disilabutane (SiH3CH2SiH2CH3)

Raman spectra of 1,3‐disilabutane (SiH₃CH₂SiH₂CH₃) as a liquid were recorded at 293 K and as a solid at 78 K. In the Raman cryostat at 78 K an amorphous phase was first formed, giving a spectrum similar to that of the liquid. After annealing to 120 K, the sample crystallized and large changes occurred in the spectra since more than 20 bands present in the amorphous solid phase vanished. These spectral changes made it possible to assign Raman bands to the anti or gauche conformers with confidence. Additional Raman spectra were recorded of the liquid at 14 temperatures between 293 and 137 K. Some Raman bands changed their peak heights with temperature but were countered by changes in linewidths, and from three band pairs assigned to the anti and gauche conformers, the conformational enthalpy difference Δ_confH(gauche–anti) was found to be 0 ± 0.3 kJ mol⁻¹ in the liquid. Infrared spectra were obtained in the vapor and in the liquid phases at ambient temperature and in the solid phases at 78 K in the range 4000–400 cm⁻¹. The sample crystallized immediately when deposited on the CsI window at 78 K, and many bands present in the vapor and liquid disappeared. Additional infrared spectra in argon matrixes at 5 K were recorded before and after annealing to temperatures 20–34 K. Quantum chemical calculations were carried out at the HF, MP2 and B3LYP levels with a variety of basis sets. The HF and DFT calculations suggested the anti conformer as the more stable one by ca 1 kJ mol⁻¹, while the MP2 results favored gauche by up to 0.4 kJ mol⁻¹. The Complete Basis Set method CBS‐QB3 gave an energy difference of 0.1 kJ mol⁻¹, with anti as the more stable one. Scaled force fields from B3LYP/cc‐pVQZ calculations gave vibrational wavenumbers and band intensities for the two conformers. Copyright © 2007 John Wiley & Sons, Ltd.     

Density functional theory calculations and vibrational spectra of p‐bromonitrobenzene

FT‐IR and FT‐Raman spectra of p‐bromonitrobenzene (p‐BNB) have been recorded in the region 4000–400 cm⁻¹ and 4000–50 cm⁻¹, respectively. The molecular structure, geometry optimization, vibrational wavenumbers have been investigated. The spectra were interpreted with the aid of normal coordinate analysis based on the density functional theory (DFT) using the standard B3LYP/6‐31G method and basis set combination and was scaled using multiple scale factors yielding good agreement between observed and calculated wavenumbers. The results of the calculations are applied to simulate infrared and Raman spectra of the title compound which showed reasonable agreement with the observed spectra. Copyright © 2009 John Wiley & Sons, Ltd.     

Conformational and structural studies of n‐propylamine from temperature dependent Raman and far infrared spectra of xenon solutions and ab initio calculations

The Raman and infrared spectra (4000 to 50 cm^–1) of the gas, liquid or solution, and solid have been recorded of n‐propylamine, CH₃CH₂CH₂NH₂. Variable temperature (−60 to −100 °C) studies of the Raman (1175 to 625 cm^–1) and far infrared (600 to 10 cm^–1) spectra dissolved in liquid xenon were carried out. From these data, the five possible conformers were identified and their relative stabilities obtained with enthalpy difference relative to trans–trans (Tt) for trans–gauche (Tg) of 79 ± 9 cm^–1 (0.9 ± 0.1 kJ/mol); for Gg of 91 ± 26 cm^–1 (1.08 ± 0.3 kJ/mol); for Gg′ of 135 ± 21 cm^–1 (1.61 ± 0.2 kJ/mol); for Gt of 143 ± 11 cm^–1 (1.71 ± 0.1 kJ/mol). The percentage of the five conformers is estimated to be 18% for the Tt, 24 ± 1% for Tg, 23 ± 3% for Gg, 18 ± 1% for Gg′ and 18 ± 1% for Gt at ambient temperature. The conformational stabilities have been predicted from ab initio calculations utilizing several different basis sets up to aug‐cc‐pVTZ from both second‐order Møller–Plesset (MP2, full) and density functional theory calculations by the Becke, three‐parameter, Lee–Yang–Parr method. Vibrational assignments were provided for the observed bands for all five conformers, which are supported by MP2(full)/6‐31G(d) ab initio calculations to predict harmonic force constants, wavenumbers, infrared intensities, Raman activities and depolarization ratios for both conformers. Estimated r₀ structural parameters were obtained from adjusted MP2(full)/6‐311+G(d,p) calculations. The results are discussed and compared with the corresponding properties of some related molecules. Copyright © 2012 John Wiley & Sons, Ltd.     

Vibrational spectroscopic studies,conformations and ab initio calculations of 1,2‐bis(trifluorosilyl)ethane (SiF3CH2CH2SiF3)

Infrared spectra of 1,2‐bis(trifluorosilyl)ethane (SiF₃CH₂CH₂SiF₃) were obtained in the vapour and liquid phases, in argon matrices and in the solid phase. Raman spectra of the compound as a liquid were recorded at various temperatures between 293 and 270 K and spectra of an apparently crystalline solid were observed. The spectra revealed the existence of two conformers (anti and gauche) in the vapour, liquid and in the matrix. When the vapour was chock‐frozen on a cold finger at 78 K and annealed to 150 K, certain weak Raman bands vanished in the crystal. The vibrational spectra of the crystal demonstrated mutual exclusion between IR and Raman bands in accordance with C_2h symmetry. Intensity variations between 293 and 270 K of pairs of various Raman bands gave ΔH(gauche—anti) = 5.6 ± 0.5 kJ mol⁻¹ in the liquid, suggesting 85% anti and 15% gauche in equilibrium at room temperature. Annealing experiments indicate that the anti conformer also has a lower energy in the argon matrices, is the low‐energy conformer in the liquid and is also present in the crystal. The spectra of both conformers have been interpreted, and 34 anti and 17 gauche bands were tentatively identified. Ab initio and density functional theory (DFT) calculations were performed giving optimized geometries, infrared and Raman intensities and anharmonic vibrational frequencies for both conformers. The conformational energy difference derived in CBS‐QB3 and in G3 calculations was 5 kJ mol⁻¹. Copyright © 2009 John Wiley & Sons, Ltd.     

Computational studies of vibrational spectra and molecular properties of 6-methyluracil using HF, DFT and MP2 methods

Theoretical investigations of atomic charges, conformers, frontier molecular orbitals, molecular geometries, thermodynamic properties, hyperpolarizabilities and harmonic vibrational frequencies of 6-methyluracil (6MU) have been carried out using ab initio Hartree-Fock (HF), density functional theory (DFT) and second order M?ller-Plesset (MP2) methods. All calculations were performed using the GAMESS-US program package with the basis sets 6-31G(d,p) and 6-311G(d,p). FT-IR and Raman spectra of 6MU were recorded in the regions 50–4000 cm⁻¹ and 60–4000 cm⁻¹ respectively. Optimized geometries were obtained using the global optimization procedure. The calculated structural parameters for two conformers of 6MU have been compared with experimentally observed values. The energy barrier (ΔE=ELUMO-EHOMO) between the HOMO and LUMO is predicted on the basis of theoretical calculations. The simulated TD-DFT spectrum has been compared with experimental electronic spectrum for 6MU. The calculated potential energy distribution (PED) values have been utilized to perform vibrational assignment of the infrared and Raman spectra.     

Assignments of Carbon-Sulphur Vibrations by Selenation: An FT-IR and FT-Raman Study on 1, 3, 5-Trithiacyclohexane

Abstract

The IR and Raman spectra of 1, 3, 5-trithiacyclohexane (1) and 1, 3, 5-triselenocyclohexane (2) have been recorded with FT-instrumentation within 3500–100 cm^?l, and the C-S vibrations of 1 have been reviewed by comparing its spectra with those of 2. The IR and Raman spectra slightly differ from those previously reported and some vibrations, previously assigned to C-H modes in 1on the basis of NCT calculations, are reassigned to C-S modes on the basis of the selenation effect. “Selenation” has proved to be a very simple and effective tool in recognizing carbon-sulfur vibrations both in IR and Raman. The Raman peaks due to carbon-chalcogen vibrations are less intense in 1 than in 2, according to the higher polarizability of the selenium atom.     

The Infrared and Raman Spectra of 4-Phenylpyridine and Its Hofmann Type Complexes.

Abstract

The Infrared and Raman spectra of 4-Phenylpyridine are reported for the first time in the 4000-400cm^?1 range. Vibrational assignments have been made for fundamental modes on the basis of frequency shifts of coordinated legend, infrared and Raman band contours and comparisons with the assignments for related molecules. The infrared spectra of M (4-Phenylpyridine) Ni(CN)₄ complexes (M=Mn, Ni or Cd) are reported. Their structure consists of polymeric layers of [M-Ni(CN)₄]_∞ with the 4-phenylpyridine molecules bound to metal (M), similar to the structure found in Hoffmann type host complexes.     

Raman and infrared spectra,conformational stability,ab initio calculations and vibrational assignment of dimethylsilylisocyanate

The Raman (3200‐30 cm⁻¹) and/or infrared spectra (3500 to 400 cm⁻¹) of gaseous, liquid and solid dimethylsilylisocyanate, (CH₃)₂ Si(H)NCO, have been recorded. The MP2(full) calculations, employing a variety of basis sets with and without diffusion functions, have been used to predict the structural parameters, conformational stability, vibrational fundamental wavenumbers, Raman activities, depolarization values and infrared intensities to support the vibrational assignment. The low wavenumber Raman spectrum of the gas with a significant number of Q‐branches for the SiNC(O) bend is consistent with an essentially linear SiNCO moiety. The ab initio calculations supported this conclusion as all possible orientations of the NCO moiety lead to nearly the same energy. This result is at variance with the conclusion from the electron diffraction study that the heavy atom skeleton was bent with an angle of 152(5)° with one stable cis conformer. It is believed that this reported angle difference from 180° is due to the shrinkage effect. The SiH distance of 1.486 Å has been obtained from the isolated SiH stretching wavenumber. From the adjustment of the ab initio MP2(full)/6‐311+G(d,p) predicted structural parameters, a proposed structure is reported, which is expected to give rotational constants within a few megahertz of the actual ones. These experimental and theoretical results are compared with the corresponding quantities of similar molecules. Copyright © 2009 John Wiley & Sons, Ltd.     

Infrared and Raman Study of the Local Anesthetic Procaine

The infrared and Laser Raman spectra of procaine with free basis in the solid state were obtained. The characteristic vibrational frequencies of their different modes were identified and assigned from isotope shifts and theoretical calculations. An infrared study in the liquid phase was also carried out. The corresponding rotation and inversion barriers in p-amino group were computed by means of different optimization procedures.     

Lattice vibrations of α′-NaV2O5

We have measured far infrared reflectance and transmittance spectra as well as Raman scattering spectra of α′-NaV₂O₅ single crystals for all the principal polarizations. The temperature range above the phase transition temperature T _c =35 K was investigated, mainly. On the basis of this experimental study and of the lattice dynamics calculations we conclude that the symmetry of NaV₂O₅ in the high-temperature phase is described by the centrosymmetric D _2h ¹³ space group. This conclusion leads to important physical consequences concerning the interpretation of one-dimensional magnetic properties of NaV₂O₅ and of the phase transition at 35 K considered earlier to be an ordinary spin-Peierls transition. The assignment of the observed phonons is given. Values of dielectric constants are obtained from the infrared data. Asymmetric shapes of several infrared lines and higher-order infrared vibrational spectra are discussed. The crystal field energy levels of the 3d electron localized at the V⁴⁺ site have been calculated in the framework of the exchange charge model using the values of effective charges obtained from the lattice dynamics calculations. According to the results of these calculations, the broad optical bands observed earlier in the vinicity of 1 eV can be interpreted as phonon assisted d-d transitions. Zh. éksp. Teor. Fiz. 115, 2170–2189 (June 1999) Published in English in the original Russian journal. Reproduced here with stylistic changes by the Translation Editor     

Molecular Dynamics simulations of borate glasses

Abstract

The results of Molecular Dynamics simulations of borate glass (B₂O₃) using three-particle interactions are presented. These calculations yield a glass consisting of randomly connected BO₃ triangles. Infrared and Raman spectra have been calculated and compared with experimental spectra. The calculated infrared spectra show two main bands, one at 650 cm^?1 and one at 1250 cm^?1, in agreement with experiment. The Raman spectra reproduce the experimental peak at 805 cm^?1 but the peak width is a factor of ten too large. Apparently, the simulated glasses have less short range order than the laboratory glasses.     

Spectroscopic properties of spinacine – an active component of ginseng (Panax ginseng) and spinach (Spinacia oleracea)

ABSTRACT

The molecular structures and vibrational properties of spinacine in its monomeric and dimeric forms are analyzed and compared to the experimental results derived from the infrared and Raman studies. The theoretical data are discussed on the basis of density functional theory quantum chemical calculations using the Lee–Yang–Parr correlation functional. The characteristic vibrations of the imidazopyridine double-ring systems in spinacine containing compounds were identified and characterized. The sequence of bands corresponding to spinacine contains the infrared or Raman lines observed at about 1612, 1307, 1250, 730, and 530?cm^?1. The occurrence of these bands in the spectra of a plant, its extracts or pharmaceuticals confirms the presence of the imidazopyridine skeleton in these substances. The analyses of extracts of ginseng roots and spinach leaves were performed using infrared spectroscopy. The wavenumbers and integral intensities of the observed bands were used to identify components of the phenylpropanoid pathway in the extracts and to prove the presence of spinacine in these natural products. The spectra of other compounds containing the imidazopyridine unit have been analyzed.