Mn(II) ion centers in novel coordination environment: a new two-dimensional coordination polymer [Mn(3,5-pdc)·2H2O]

The hydrothermal synthesis and structure of the coordination polymer [Mn(3,5-pdc)·2H₂O] (3,5-pdc=3,5-pyridinedicarboxylic acid) with a novel seven-coordination mode of Mn(II) ion is reported. The metal ion center is in the pentagonal bipyramid coordination environment. Oxygen atoms from two waters hold the axial sites, and four oxygen atoms from two chelated carboxylic groups and one nitrogen atom from one pyridine ring occupy the five planar sites. This novel coordination environment of Mn(II) ion may be due to the smaller steric effect of chelated carboxylic groups. Each 3,5-pdc ligand is in the same coordination mode to bridge three Mn(II) ion centers and lead to two-dimensional layers with water molecules between the layers. Hydrogen bonds, which are generated by these water molecules and carboxylic groups, connect the layers to form a three-dimensional structure.     

Structural diversification of the coordination mode of divalent metals with 1,3-propanediaminetetraacetate (1,3-pdta): The missing crystal structure of the s-block metal complex [Sr2(1,3-pdta)(H2O)6]·H2O

This paper reports the synthesis and X-ray characteristics of the missing homonuclear s-block metal complex {[Sr₂(1,3-pdta)(H₂O)₆]·H₂O}_n. In the title compound, the hexadentate 1,3-propanediaminetetraacetate (1,3-pdta) ligand joins to two Sr(II) centers via the diamine chain. Moreover, each Sr(II) is bridged through two carboxylate O atoms and a water molecule to two neighboring Sr(II) ions. The coordination sphere around each Sr(II) ion consists of one diamine nitrogen, four carboxylate oxygens and four water molecules. Comparison with the previously reported M(II)-1,3-pdta complexes reveals that increasing of the ion size results in the incorporation of water molecules into its first coordination sphere and consequent increase of the coordination number (C.N.) from six to seven or eight, while keeping the hexadentate coordination mode of the ligand. Further increase of the metal ion size leads to the loss of the chelating properties of the diamine and formation of a bis-tridentate complex. Associated with it is the change in the binding mode of the carboxylate groups. This forms the basis for classification of divalent metal 1,3-pdta complexes into five distinct structural classes. Additionally, in the present study X-ray powder diffraction and IR spectroscopy were used to distinguish the different structural types of M(II)-1,3-pdta complexes, including Ba[Ba(1,3-pdta)]·2H₂O which has been used for their preparation.     

Factors governing the metal coordination number in metal complexes from Cambridge Structural Database analyses

The metal coordination number (CN) is a key determinant of the structure and properties of metal complexes. It also plays an important role in metal selectivity in certain metalloproteins. Despite its central role, the preferred CN for several metal cations remains ambiguous, and the factors determining the metal CN are not fully understood. Here, we evaluate how the CN depends on (1) the metal's size, charge, and charge-accepting ability for a given set of ligands, and (2) the ligand's size, charge, charge-donating ability, and denticity for a given metal by analyzing the Cambridge Structural Database (CSD) structures of metal ions in the periodic table. The results show that for a given ligand type, the metal's size seems to affect its CN more than its charge, especially if the ligand is neutral, whereas, for a given metal type, the ligand's charge and charge-donating ability appear to affect the metal CN more than the ligand's size. Interestingly, all 98 metal cations surveyed could adopt more than than one CN, and most of them show an apparent preference toward even rather than odd CNs. Furthermore, as compared to the preferred metal CNs observed in the CSD, those in protein binding sites generally remain the same. This implies that the protein matrix (excluding amino acid residues in the metal's first and second coordination shell) does not impose severe geometrical restrictions on the bound metal cation.     

Ground- and excited-state reactivity of iron porphyrinogens

The iron(II) porphyrinogen dication, [LDeltaDeltaFeII]2+, is a multielectron oxidant featuring the metal center in its reduced state and the ligand as the redox reservoir. Oxidations break the ligand's redox-active C-C bonds. Extremely short-lived excited states are consistent with extensive structural reorganization that accompanies charge-transfer excitation of the porphyrinogen.     

Isostructural metal-anion radical coordination polymers with tunable phosphorescent colors (deep blue, blue, yellow, and white) induced by terminal anions and metal cations

Five phosphorescent metal-anion radical coordination polymers based on a new anion radical ligand generated by in situ deprotonation of a stable zwitterionic radical are described. The N,O,N-tripodal anion radical ligand links metal cations, which leads to five isostructural coordination polymers, [M(3)(bipo(-.))(4)(L)(2)](n) (M=Cd or Mn, Hbipo(-.)=2,3'-biimidazo[1,2-a]pyridin-2'-one, L=Cl(-), HCOO(-) or SCN(-)). The isostructural coordination polymers exhibit novel one-dimensional spirocycle-like structures. Three isostructural Cd(II) coordination polymers display unusual phosphorescent color changes (blue, yellow, and white) induced by terminal anions. Significantly, the Cd(II) coordination polymer with terminal Cl(-) possesses moderate quantum yield, and shows a bright white-light phosphorescence emission, which is independent of excitation wavelength and can even be excited by visible light. Upon adjusting the metal cation to Mn(II), two isostructural Mn(II) coordination polymers reveal deep-blue-light phosphorescence emissions that are independent of terminal anions. As radical-based coordination polymers, some of them show antiferromagnetic interactions between radical species or radical and metal center.     

Coordination polymers of Mn2+ and Dy3+ ions built with a bent tricarboxylate: metamagnetic and weak anti-ferromagnetic behavior

Two new coordination polymers have been synthesized with Mn(2+) and Dy(3+) ions using a new bent ether-bridged tricarboxylic acid ligand, o-cpiaH(3) (5-(2-carboxy-phenoxy)-isophthalic acid). The ligand readily reacts with a Mn(2+) salt in presence of pyridine (py) under hydrothermal condition to afford a 3D coordination polymer {[Mn(9)(o-cpia)(6)(py)(3)(3H(2)O)]·H(2)O}(n) (1), that contains two types of polymeric chains. One of them is merely carboxylate bridged Mn(2+) where each metal ion shows both penta- and hexa-coordination. The other chain consists of carboxylate-bridging along with terminally bound pyridines providing both penta- and hexa-coordination to each metal ion. When o-cpiaH(3) is treated with Dy(NO(3))(3).xH(2)O under solvothermal condition, it gives rise to an unusual double layer (6,6) connected 2D coordination polymer {[Dy(o-cpia)]}(n)(2), where each metal ion is hexacoordinated. The double layer 2D sheets are stacked to each other in AA··· fashion through strong C-H···π interactions to generate an overall 3D supramolecular architecture. Both the complexes have been characterized by single crystal X-ray diffraction, IR spectroscopy, thermogravimetry and elemental analysis. Variable temperature magnetic susceptibility measurements indicate that 1 exhibits metamagnetic behavior while 2 shows weak antiferromagnetic behavior.     

源自天然席夫碱的过渡金属配合物在分光光度法测天然水中的Fe(Ⅲ)的应用

描述了一种新颖、简便的合成含五齿配位基的大环席夫碱配体的方法,制备和表征了该席夫碱的1∶1包合物。用化学和光谱学方法测定了标题配合物的组成,认为在所有配合物中配位金属原子取八面体结构。数据表明:配体起O2N4六齿结构而每个环绕金属原子在八面体环境中。配合物的红外和1H NMR光谱符合中心金属原子的配位结果。用分光光度法测定了配合物的稳定常数。用共轭余量法(CR method)计算了在热分解的不同阶段配合物活化的动力学和热力学参数。此外,用抑菌圈直径法筛选了配体及其金属配合物抑制细菌和真菌的能力。用回收率试验研究了天然螯合配体在不同天然水体中对Fe(Ⅲ)离子配合作用的影响。     

An Interwoven Metal‐Organic Framework Combining Mechanically Interlocked Linkers and Interpenetrated Networks

New dibenzo[24]crown‐8 ether derivatives were prepared that contain appendages with thioether donors that can coordinate to a metal ion. These macrocycles were then combined with 1,2‐bis(pyridinium) ethane axles to create two types of [2]rotaxane ligands; those with the four thioether donors on the crown ether and those with six donor groups, four from the crown ether and two more attached to the stoppering groups of the dumbbell. The crown ethers and both types of [2]rotaxane ligands were allowed to react with Ag^I ions to form metal‐organic rotaxane framework (MORF) style coordination polymers. The interlocked hexadentate ligand forms the first example of a new type of lattice containing interwoven frameworks resulting from both interpenetration of frameworks due to the presence of an interlocked ligand and more classical interpenetration of independent frameworks.     

Dinuclear complexes formed with the triazacyclononane derivative ENOTA4-: high-pressure 17O NMR evidence of an associative water exchange on [MnII2(ENOTA)(H2O)2

Mn2+ has five unpaired d-electrons, a long electronic relaxation time, and labile water exchange, all of which make it an attractive candidate for contrast agent application in medical magnetic resonance imaging. In the quest for stable and nonlabile Mn2+ complexes, we explored a novel dimeric triazacyclononane-based ligand bearing carboxylate functional groups, H4ENOTA. The protonation constants of the ligand and the stability constants of the complexes formed with some endogenously important metals (Ca2+, Cu2+, Zn2+), as well as with Mn2+ and Ce3+, have been assessed by NMR methods, potentiometry, and UV-vis spectrophotometry. Overall, the thermodynamic stability of the complexes is lower as compared to that of the corresponding NOTA analogues (H3NOTA, 1,4,7-triaazacyclononane-1,4,7-triacetic acid). The crystal structure of Mn2(ENOTA)(H2O) x 5H2O contains two six-coordinated Mn2+, in addition to the three amine nitrogens and the two oxygens from the pendent monodentate carboxylate groups, and one water (Mn2) or one bridging carboxylate oxygen (Mn1) completes the coordination sphere of the metal ion. In an aqueous solution, this bridging carboxylate is replaced by a water molecule, as evidenced by the 17O chemical shifts and proton relaxivity data that point to monohydration for both metal ions in the dinuclear complex. A variable-temperature and -pressure 17O NMR study has been performed on [Mn2(ENOTA)(H2O)2] to assess the rate and, for the first time on a Mn2+ chelate, also the mechanism of the water exchange. The inner sphere water is slightly more labile in [Mn2(ENOTA)(H2O)2] (k298ex = 5.5 x 107 s-1) than in the aqua ion (2.1 x 107 s-1, Merbach, A. E.; et al. Inorg. Chem. 1980, 19, 3696). The water exchange proceeds via an almost limiting associative mechanism, as evidenced by the large negative activation volume (deltaV = -10.7 cm3 mol-1). The proton relaxivities measured on [Mn2(ENOTA)(H2O)2] show a low-field dispersion at approximately 0.1 MHz arising from a contact interaction between the MnII electron spin and the water proton nuclear spins.     

A novel carboxylate-free ferromagnetic trinuclear mu(3)-oxo-manganese(III) complex with distorted pentagonal-bipyramidal metal centers

In methanol, the reaction of Mn(ClO(4))(2).6H(2)O and 1,2-bis(biacetylmonoximeimino)ethane (H(2)bamen) in the presence of triethylamine affords a trinuclear complex having the formula [Mn(3)(mu(3)-O)(mu(3)-bamen)(3)]ClO(4).2H(2)O. The structure of this complex shows a symmetric planar central [Mn(III)(3)(mu(3)-O)] unit coordinated to three hexadentate bridging (via oximate groups) ligands. The N(4)O(3) coordination sphere around each metal center is very close to pentagonal-bipyramidal. A cyclic voltammogram of the complex displays two reversible and an irreversible response due to Mn(III)(3) --> Mn(III)(2)Mn(IV), Mn(III)(2)Mn(IV) --> Mn(III)Mn(IV)(2), and Mn(III)Mn(IV)(2) --> Mn(IV)(3) oxidation processes, respectively. Cryomagnetic data reveal that the complex is ferromagnetic.     

一个锰的二维配位聚合物的合成及其性质

本文用2-咪唑乙酸(Hiaa),2,2′-联吡啶,氢氧化钠和六水合高氯酸锰在水和乙醇中反应合成了1个二维配位化合物{[Mn(iaa)(2,2′-bipyridine)(H₂O)](ClO₄)}_n (1)。单晶结构表明化合物1是1个新颖的二维双核锰配位聚合物,锰离子的配位构型为扭曲的八面体。每一个锰离子与3个配体配位,而每个配体与3个锰离子桥连。磁性研究表明1中Mn(Ⅱ)离子间存在弱的反     

Definition of magneto-structural correlations for the MnII ion

The electronic properties of the high spin mononuclear MnII complexes [Mn(tpa)(NCS)2] (1) (tpa=tris-2-picolylamine), [Mn(tBu3-terpy)2](PF6)2 (2) (tBu3-terpy=4,4',4'-tri-tert-butyl-2,2':6',2'-terpyridine) and [Mn(terpy)2](I)2 (3) (terpy=2,2':6',2'-terpyridine) with an N6 coordination sphere have been determined by multifrequency EPR spectroscopy. The X-ray structures of 1.CH3CN and 2.C4H10 O.0.5 C2H5OH.0.5 CH3OH reveal that the MnII ion lies at the center of a distorted octahedron. The D-values of 1-3 all fall in the narrow range of 0.041 to 0.105 cm(-1). The comparison of the results reported here and those found in the literature is consistent with the following observation: the D value is sensitive to the coordination number (6 or 5) of the MnII ion as long as the coordination sphere involves only nitrogen and/or oxygen based ligands. This magneto-structural correlation has been analyzed in this work though DFT model calculations. The zero-field splitting (zfs) parameters of 1-3 have been calculated and are in reasonable agreement with the experimental values. Hypothetical simplified models [Mn(NH3)x(OH2)y]2+ (x+y=5 or 6 and [Mn(NH3)5X]+ (X=OH, Cl)) have been constructed to investigate the origin of the zfs. This investigation reveals i) that D is sensitive to the coordination number (5 or 6) of the MnII ion, ii) for the five coordinate systems the major contribution to D is the spin-orbit coupling part, iii) for the six coordinate systems the major contribution to D is the spin-spin interaction and iv) the deprotonation of a water ligand leads to an increase of D, consistent with the relative ligand fields of OH(-) versus H2O.     

Zn(ii), Cd(ii) and Pb(ii) complexation with pyridinecarboxylate containing ligands

Herein, we report the coordination properties towards Zn(ii), Cd(ii) and Pb(ii) of two hexadentate ligands containing pyridinecarboxylate groups with ethane-1,2-diamine (bcpe) or cyclohexane-1,2-diamine (bcpc) backbones. The X-ray crystal structures of [Zn(bcpe)], [Cd(bcpe)] and [Cd(bcpc)] show hexadentate binding of the ligand to the metal ions, with the coordination polyhedron being best described as a severely distorted octahedron. The X-ray crystal structure of the Pb(ii) analogue shows the presence of tetrameric structural units [Pb(4)(bcpe)(4)] in which the four Pb(ii) ions are bridged by carboxylate oxygen atoms. While in the Zn(ii) and Cd(ii) complexes the bcpe ligand adopts a twist-wrap (tw) conformation in which the ligand wraps around the metal ion by twisting the pyridyl units relative to each other, for the Pb(ii) complex a twist-fold (tf) conformation, where a slight twisting of the pyridyl units is accompanied by an overall folding of the two pyridine units relative to each other is observed. Theoretical calculations performed at the DFT (B3LYP) level on the [Pb(bcpe)] and [Pb(bcpc)] systems indicate that the tf conformation is more stable than the tw form both in the solid state and in aqueous solution. The analysis of the natural bond orbitals (NBOs) indicate that the Pb(ii) lone-pair is polarized by a substantial 6p contribution, which results in a hemi-directed coordination geometry around the metal ion. Potentiometric studies have been carried out to determine the protonation constants of the ligands and the stability constants of the complexes with Zn(ii), Cd(ii), Pb(ii) and Ca(ii). The replacement of the ethylene backbone of bcpe by a cyclohexylene ring causes a very important increase in the stability constant of the Pb(ii) complex (ca. 2.3 logK units), while this effect is less important for Cd(ii) (ca. 1.4 logK units). However, the introduction of the cyclohexylene ring does not substantially affect the stability of the Zn(ii) and Ca(ii) complexes. The ligand bcpc shows Pb/Ca and Cd/Ca selectivities [10(8.9) and 10(9.8), respectively] superior to those of extracting agents, such as EDTA, already used in Pb(ii) and Cd(ii) removal from contaminated water and soils.     

Synthesis, structure, and stereochemistry of trinuclear metal complexes formed from the phosphorus-based achiral tripodal ligand {P(S)[N(Me)N=CHC6H4-o-OH]3} (LH3): luminescent properties of L2Cd3 x 2H2O

Neutral trinuclear metal complexes L2Cd3 x 2H2O, L2Mn3 x MeOH, and L2Zn3 x MeOH were isolated in the reaction between the phosphorus-centered achiral tris(hydrazone) P(S)[N(Me)N=CHC6H(4)-o-OH]3 (LH3) and the corresponding divalent metal ions. The trinuclear complexes contain two equivalent terminal metal ions (M(t)) and a central metal ion (M(c)). The ligand encapsulates M(t) in a facial N3O3 coordination environment. From the coordination sphere of the two terminal metal ions a pair of phenolic oxygen atoms further coordinate to the central metal ion. The coordination requirements of M(c) are completed by the solvents of coordination. The achiral trianionic tripodal ligand (L)3- induces chirality in the metal complexes. This results in a delta (clockwise) or lambda (anticlockwise) configuration for the terminal metal ions. The enantiomeric complexes 2-4 (delta-delta or lambda-lambda) crystallize as racemic compounds. The supramolecular structures of 2-4 reveal chiral recognition in the solid-state; every molecule with the delta-delta configuration interacts stereospecifically, through C-H...S=P bonds, with two lambda-lambda molecules to generate a one-dimensional polymeric chain. Photophysical studies of the diamagnetic trinuclear complexes reveal that the tricadmium complex is luminescent in the solid state as well as in solution. In contrast LH3 and L2Zn3 x MeOH are nonluminescent.     

Transition metal(II) ions with dinegative tetradentate schiff base

Some new coordination polymers of Mn(II), Co(II), Ni(II), Cu(II), Zn(II) and Cd(II), obtained from the interaction of metal acetate with dipotassium salt of N,N’-di(carboxyethylidene)terephthalaldehydediimine (K₂SB) are described. The products, which have been characterized by elemental analyses, magnetic measurements, thermogravimetric analyses, electronic and infrared spectral studies, have composition, [M(SB)(H₂O)₂]_n. These colored coordination polymers are non-hygroscopic and quite stable at room temperature. On the basis of analytical data and IR studies, a 1:1 metal to ligand stoichiometry has been suggested to these coordination polymers. The IR studies have also revealed that ligands are coordinated to metal ion through carboxy oxygen and azomethine nitrogen. All the studies suggested tetradentate nature of the ligand with octahedral symmetry of the coordination polymers. All the coordination polymers are insoluble in acetone, ethanol, chloroform, methanol, benzene, DMF and DMSO. The thermal decomposition of the coordination polymers is studied and indicates that not only the coordinated water is lost but also that the decomposition of the ligand from the coordination polymers is necessary to interpret the successive mass loss.     

Synthesis, Structure and Properties of Tren-Schiff Base Compound and Its Manganese(III) Complex by Original Self-assembly Reaction

The new self-assembly tripodal hexadentate Schiff base compound, C 27 H 30 N 4 O 3 , derived from tris(2-aminoethyl)amine(tren) with salicylaldehyde and its manganese(III) complex [(C 27 H 27 N 4 O 3 )Mn]·CH 3 OH(1) were designed and synthesized by original self-assembly reaction at room temperature in the solution of methanol. Both the compounds were characterized by elemental analysis, IR spectrometry, UV-Vis spectroscopy and X-ray sin-gle crystal diffraction. It is noteworthy that the tripodal hexadentate Schiff base ligand effectively encapsulates the manganese(III) ion and enforces a six-coordinate geometry in complex 1 with the apical nitrogen atom of tren-Schiff base remaining unbound to the metal. It is found that there are several intra-molecular hydrogen bonds in them(C—H···O and O—H···N). In addition, quantum chemistry calculations were also performed and discussed in detail. These results are consistent with the structural analyses of them.     

Theoretical study of inner and outer mononuclear complexes of Co(II), Ni(II), and Cu(II) with a compartmental hexadentate Schiff base derived from 3-formylsalicylic acid

Density functional theory (B3LYP/6-31G(d)) has been applied for optimization and calculation of the vibrational spectra of the compartmental hexadentate Schiff base derived from 3-formylsalicylic acid and 4,5-dichloro-1,2-phenylenediamine and 12 of its mononuclear complexes with Co(II), Ni(II), and Cu(II). Six of these complexes have the metal ion occupying the inner, N₂O₂, or the outer, O₂O₂, coordination sites in square planar geometry. The other six complexes possess octahedral geometry, occupying the inner or the outer coordination sites coordinating, additionally, to two waters. Significant changes in the ligand geometry have been observed in all complexes to permit efficient complexation with the metal. Assignments of the infrared bands are proposed based on calculations. Vibrational frequencies that are important for assignment and confirmation of the coordination sites are reported. Comparison of the total energies of the complexes reveals that inner complexes are more stable than corresponding outer complexes. Selectivity of metal ions to the coordination sites is also discussed.     

X-Ray Diffraction Study on Manganese(II) Complexes with Thiophene-2-Carboxylate and Furan-3-Carboxylate Ligands

Abstract

Mn(II) cations in the crystals of trisaquobis(μ-thiophen-2-carboxylato-O,O′)(thiophen-2-carboxylato-O)manganese(II) monohydrate are bridged by oxygen atoms donated by bidentate carboxylic groups of two thiophen-2-carboxylate ligands. In addition, each Mn(II) ion is coordinated by an oxygen atom of a monodentate carboxylic group of this ligand and three oxygen atoms of water molecules. The coordination around the Mn(II) cation is octahedral. The bridging of the ligands results in molecular ribbons propagating in the c-direction of the crystal held together by C?H…O hydrogen bonds. The crystal structure of diaquobis(μ-furan-3-carboxylato-O,O′)di(μ-furan-3-carboxylato-O,O)(μ-aqua-O)manganese(II) consists of dinuclear structural units. In each molecule Mn(II) cations are O,O′ bridged by oxygen atoms of bidentate carboxylic groups of two furan-3-carboxylate ligands and have a water located between the Mn cations. The units are O,O′ bridged to Mn(II) ions located in adjacent units by bidentate oxygen atoms, forming molecular ribbons extending in the c-direction. Octahedral coordination around each Mn(II) ion is completed by two water molecules. The octahedra around two adjacent metal ions in the unit share a common apex - the bridging oxygen atom of the water molecule. The ribbons are held together by C?H…O hydrogen bonds between furan ring oxygen atoms and the carbon atoms of adjacent furan rings.     

Crystal Structures of DOTMA Chelates from Ce3+ to Yb3+: Evidence for a Continuum of Metal Ion Hydration States

The crystal structures of chelates formed between each stable paramagnetic lanthanide ion and the octadentate polyamino carboxylate ligand DOTMA are described. A total of 23 individual chelates structures were obtained; in each chelate the coordination geometry around the metal ion is best described as a twisted square antiprism (torsion angle −25.0°–−31.4°). Despite the uniformity of the general coordination geometry provided by the DOTMA ligand, there is a considerable variation in the hydration state of each chelate. The early Ln³⁺ chelates are associated with a single inner sphere water molecule; the Ln-OH₂ interaction is remarkable for being very long. After a clear break at gadolinium, the number of chelates in the unit cell that have a water molecule interacting with the Ln³⁺ decreases linearly until at Tm³⁺ no water is found to interact with the metal ion. The Ln-OH₂ distance observed in the chelates of the later Ln³⁺ ions are also extremely long and increase as the ions contract (2.550–2.732 Å). No clear break between hydrated and dehydrated chelates is observed; rather this series of chelates appear to represent a continuum of hydration states in which the ligand gradually closes around the metal ion as its ionic radius decreases (with decreased hydration) and the metal drops down into the coordination cage.