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1.
N‐Boc/Fmoc/Z‐N′‐formyl‐gem‐diaminoalkyl derivatives, intermediates particularly useful in the synthesis of partially modified retro‐inverso peptides, have been characterized by both positive and negative ion electrospray ionization (ESI) ion‐trap multi‐stage mass spectrometry (MSn). The MS2 collision induced dissociation (CID) spectra of the sodium adduct of the formamides derived from the corresponding N‐Fmoc/Z‐amino acids, dipeptide and tripeptide acids show the [M + Na‐NH2CHO]+ ion, arising from the loss of formamide, as the base peak. Differently, the MS2 CID spectra of [M + Na]+ ion of all the N‐Boc derivatives yield the abundant [M + Na‐C4H8]+ and [M + Na‐Boc + H]+ ions because of the loss of isobutylene and CO2 from the Boc protecting function. Useful information on the type of amino acids and their sequence in the N‐protected dipeptidyl and tripeptidyl‐N′‐formamides is provided by MS2 and subsequent MSn experiments on the respective precursor ions. The negative ion ESI mass spectra of these oligomers show, in addition to [M‐H]?, [M + HCOO]? and [M + Cl]? ions, the presence of in‐source CID fragment ions deriving from the involvement of the N‐protecting group. Furthermore, MSn spectra of [M + Cl]? ion of N‐protected dipeptide and tripeptide derivatives show characteristic fragmentations that are useful for determining the nature of the C‐terminal gem‐diamino residue. The present paper represents an initial attempt to study the ESI‐MS behavior of these important intermediates and lays the groundwork for structural‐based studies on more complex partially modified retro‐inverso peptides. Copyright © 2013 John Wiley & Sons, Ltd.  相似文献   

2.
By a reaction between the corresponding [N‐allylquinolinium]X (X = Cl, Br, I) and CuCN in a methanolic medium crystals of [C24H21N2][CuCl1.35Br0.65] ( 1 ), [C24H21N2][CuBr2] ( 2 ) and [C24H21N2]I ( 3 ) have been obtained and characterized structurally by X‐ray (at 100 K). Isostructural complexes 1 and 2 crystallize in monoclinic space group P21/n, Z = 4: 1 a = 13.193(4), b = 19.185(5), c = 8.429(3), β = 104.85(3)°, V = 2062(1) Å3, R = 0.051 for 3359 reflections; 2 a = 13.373(4), b = 19.104(6), c = 8.544(3) Å, β = 104.58(3)°, V = 2112(1) Å3, R = 0.057 for 3297 reflections. Compound 3 crystallizes in monoclinic system, space group P21/n, Z = 4, a = 8.889(2), b = 16.842(3), c = 13.294(3) Å, β = 104.71(3)° V = 1925(1) Å3, R = 0.034 for 4042 reflections. The same cation [C24H21N2]+ in the compound 1 – 3 appeared as a product of N‐allylquinolinium catalytic cyclodimerization. Neither N‐allyl nor C‐vinyl groups participate in CuI π‐coordination in the structures of 1 and 2 , therefore [CuX2]? anions can possess a linear form.  相似文献   

3.
Both title structures exhibit essentially planar barbiturate rings. The crystal structure of enallylpropymal (5‐allyl‐5‐isopropyl‐1‐methylbarbituric acid), C11H16N2O3, is composed of centrosymmetric N—H...O hydrogen‐bonded dimers, while 1,5‐di(but‐2‐enyl)‐5‐ethylbarbituric acid, C14H20N2O3, forms N—H...O hydrogen‐bonded helical chains. Each of the ten known crystal structures of closely related N‐monosubstituted derivatives of barbituric acid displays one of the fundamental N—H...O hydrogen‐bonded motifs of the two title structures, i.e. either a dimer or a chain.  相似文献   

4.
The syntheses of phenacyl N‐(2,2‐dimethyl‐2H‐azirin‐3‐yl)‐L ‐prolinate and allyl N‐(2,2‐dimethyl‐2H‐azirin‐3‐yl)‐L ‐prolinate are reported. Reactions of these 2H‐azirin‐3‐amine derivatives with Z‐protected amino acids have shown them to be suitable synthons for the Aib‐Pro unit in peptide synthesis. After incorporation into the peptide by means of the ‘azirine/oxazolone method’, the C‐termini of the resulting peptides were deprotected selectively with Zn in AcOH or by a mild Pd0‐promoted procedure, respectively.  相似文献   

5.
In the hydrated adduct N,N′‐di­methyl­piperazine‐1,4‐diium bis(3‐carboxy‐2,3‐di­hydroxy­propanoate) dihydrate, [MeNH(CH2CH2)2NHMe]2+·2(C4H5O6)?·2H2O or C6H16N22+·2C4H5O6?·2H2O, formed between racemic tartaric acid and N,N′‐di­methyl­piperazine (triclinic P, Z′ = 0.5), the cations lie across centres of inversion. The anions alone form chains, and anions and water mol­ecules together form sheets; the sheets are linked by the cations to form a pillared‐layer framework. The supramolecular architecture thus takes the form of a family of N‐dimensional N‐component structures having N = 1, 2 or 3.  相似文献   

6.
The title dipeptide, 1‐(tert‐butoxy­carbonyl‐d ‐alanyl)‐N‐iso­propyl‐l ‐pipecol­amide or Boc‐d ‐Ala‐l ‐Pip‐NHiPr (H‐Pip‐OH is pipecolic acid or piperidine‐2‐carboxylic acid), C17H31N3­O4, with a d –l heterochiral sequence, adopts a type II′β‐­turn conformation, with all‐trans amide functions, where the C‐terminal amide NH group interacts with the Boc carbonyl O atom to form a classical i+3 i intramolecular hydrogen bond. The Cα substituent takes an axial position [Hα (Pip) equatorial] and the trans pipecolamide function is nearly planar.  相似文献   

7.
The title compound (systematic name: methyl 2‐{2‐[(tert‐butoxycarbonyl)amino]‐2‐methylpropanamido}‐2‐methylpropanoate), C14H26N2O5, (I), crystallizes in the monoclinic space group P21/n in two polymorphic forms, each with one molecule in the asymmetric unit. The molecular conformation is essentially the same in both polymorphs, with the α‐aminoisobutyric acid (Aib) residues adopting ϕ and ψ values characteristic of α‐helical and mixed 310‐ and α‐helical conformations. The helical handedness of the C‐terminal residue (Aib2) is opposite to that of the N‐terminal residue (Aib1). In contrast to (I), the closely related peptide Boc‐Aib‐Aib‐OBn (Boc is tert‐butoxycarbonyl and Bn is benzyl) adopts an αL‐PII backbone conformation (or the mirror image conformation). Compound (I) forms hydrogen‐bonded parallel β‐sheet‐like tapes, with the carbonyl groups of Aib1 and Aib2 acting as hydrogen‐bond acceptors. This seems to represent an unusual packing for a protected dipeptide containing at least one α,α‐disubstituted residue.  相似文献   

8.
In the crystal structure of the title compound, [N,N′‐bis(3‐­amino­propyl)­ethyl­enedi­amine‐κ4N,N′,N′′,N′′′][1,3,5‐triazine‐2,4,6(1H,3H,5H)‐tri­thionato(2−)‐κ2N,S]­zinc(II) ethanol sol­vate, [Zn(C8H22N4)2(C3HN3S3)]·C2H6O, the ZnII atom is octa­hedrally coordinated by four N atoms [Zn—N = 2.104 (2)–2.203 (2) Å] of a tetradentate N‐donor N,N′‐bis(3‐­amino­propyl)­ethyl­enedi­amine (bapen) ligand and by two S and N atoms [Zn—S = 2.5700 (7) Å and Zn—N = 2.313 (2) Å] of a tri­thio­cyanurate(2−) (ttcH2−) dianion bonded as a bidentate ligand in a cis configuration. The crystal structure of the compound is stabilized by a network of hydrogen bonds.  相似文献   

9.
In order to investigate the relative stability of N—H...O and N—H...S hydrogen bonds, we cocrystallized the antithyroid drug 6‐propyl‐2‐thiouracil with two complementary heterocycles. In the cocrystal pyrimidin‐2‐amine–6‐propyl‐2‐thiouracil (1/2), C4H5N3·2C7H10N2OS, (I), the `base pair' is connected by one N—H...S and one N—H...N hydrogen bond. Homodimers of 6‐propyl‐2‐thiouracil linked by two N—H...S hydrogen bonds are observed in the cocrystal N‐(6‐acetamidopyridin‐2‐yl)acetamide–6‐propyl‐2‐thiouracil (1/2), C9H11N3O2·2C7H10N2OS, (II). The crystal structure of 6‐propyl‐2‐thiouracil itself, C7H10N2OS, (III), is stabilized by pairwise N—H...O and N—H...S hydrogen bonds. In all three structures, N—H...S hydrogen bonds occur only within R22(8) patterns, whereas N—H...O hydrogen bonds tend to connect the homo‐ and heterodimers into extended networks. In agreement with related structures, the hydrogen‐bonding capability of C=O and C=S groups seems to be comparable.  相似文献   

10.
The crystal structures of N,N‐di­methyl­biguanidium oxalate monohydrate, C4H13N52+·C2O42−·H2O, (I), and N,N‐di­methyl­biguanidium sulfate monohydrate, C4H13N52+·SO42−·H2O, (II), show that both compounds contain the same N,N‐di­methyl­biguanidium dication. In (I), two independent oxalate ions lie about inversion centres. Strong double hydrogen bonds, with D⋯A distances of 2.658 (2) and 2.830 (3) Å in (I), and 2.722 (3) and 2.815 (3) Å in (II), are present between N atoms of the N,N‐di­methyl­biguanidium moieties and either the carboxyl­ate group of the oxalate anion or the sulfate anion.  相似文献   

11.
The title compound, N‐(2‐pyridylmethyl)salicylamide ( 1 ), was synthesized by ester aminolysis of methyl salicylate and 2‐picolylamine. In the presence of triethylamine as a supporting base, the salicylamide moiety reacts with the organodichlorosilanes RR′SiCl2 to form the desired six‐membered heterocycles of the type RR′Si–O–(o‐C6H4)–C(=O)N(pic), with pic being the 2‐pyridylmethyl (i.e., 2‐picolyl) moiety and RR′ = Me, Me ( 2a ); Me, Ph ( 2b ); Ph, Ph ( 2c ); Bn, Bn ( 2d ); All, Ph ( 2e ) and Ph, H ( 2f ). Despite the absence of notable ring strain release Lewis acidity (i.e., only a six‐membered chelate is formed by the dianion, and smaller rings are not present in the compound), the poor electron withdrawal from silicon by its C– or H– substituents and the flexible methylene bridge between the salicylamide and the pyridine moiety, the pyridine N donor atom furnishes pentacoordinate silicon coordination spheres in all of these compounds 2a – 2f . The coordination number of the silicon atom was confirmed by single‐crystal X‐ray diffraction analysis for the solid state and by 29Si NMR spectroscopy for the solution state.  相似文献   

12.
The title compound, [(Z)‐4‐allyl‐2‐(2‐hydroxybenzylidene)thiosemicarbazide‐κS][(E)‐4‐allyl‐1‐(2‐oxidobenzylidene)thiosemicarbazidato‐κ3O,N1,S]copper(II) monohydrate, [Cu(C11H11N3OS)(C11H13N3OS)]·H2O, crystallized as a rotational twin in the monoclinic crystal system (space group Cc) with two formula unit (Z′ = 2) in the asymmetric unit, one of which contains an allyl substituent disordered over two positions. The CuII atom exhibits a distorted square‐planar geometry involving two differently coordinated thiosemicarbazone ligands. One ligand is bonded to the CuII atom in a tridentate manner via the phenolate O, azomethine N and thioamide S atoms, while the other coordinates in a monodentate manner via the S atom only. The complex is stabilized by an intramolecular hydrogen bond, which creates a six‐membered pseudo‐chelate metalla‐ring. The structure analysis indicates the presence of the E isomer for the tridentate ligand and the Z isomer for the monodentate ligand. The crystal structure contains a three‐dimensional network built from intermolecular O—H...O, N—H...O, O—H...N and N—H...S hydrogen bonds.  相似文献   

13.
The compounds N′‐benzylidene‐N‐methylpyrazine‐2‐carbohydrazide, C13H12N4O, (IIa), N′‐(2‐methoxybenzylidene)‐N‐methylpyrazine‐2‐carbohydrazide, C14H14N4O2, (IIb), N′‐(4‐cyanobenzylidene)‐N‐methylpyrazine‐2‐carbohydrazide dihydrate, C14H11N5O·2H2O, (IIc), N‐methyl‐N′‐(2‐nitrobenzylidene)pyrazine‐2‐carbohydrazide, C13H11N5O3, (IId), and N‐methyl‐N′‐(4‐nitrobenzylidene)pyrazine‐2‐carbohydrazide, C13H11N5O3, (IIe), have dihedral angles between the pyrazine rings and the benzene rings in the range 55–78°. These methylated pyrazine‐2‐carbohydrazides have supramolecular structures which are formed by weak C—H...O/N hydrogen bonds, with the exception of (IIc) which is hydrated. There are π–π stacking interactions in all five compounds. Three of these structures are compared with their nonmethylated counterparts, which have dihedral angles between the pyrazine rings and the benzene rings in the range 0–6°.  相似文献   

14.
The kinetics of oxidation of [CrIIIcdta(H2O)]? and [CrIIIdtpa(H2O)]2? (where cdta = trans‐1,2‐diaminocyclohexane‐N,N,N′,N′‐tetraacetate and dtpa = diethylenetriaminepentaacetate) by periodate ion has been studied in aqueous solutions. The oxidation of these complexes was carried out in the pH range 5.52–7.44 for the [CrIIIcdta(H2O)]? complex and the pH range 5.56–8.56 for the [CrIIIdtpa(H2O)]2? complex. The reaction exhibited an uncommon second‐order dependence on [CrIIIL(H2O)]n (L = cdta or dtpa and n=?1 or ?2, respectively) and a first‐order dependence on [IO?4]. At fixed reaction conditions, the reaction rate is described by Eq. (i). The third‐order rate constant, k3, varied with [H+] according to Eq. (ii). (i) (ii) A mechanism in which simultaneous one‐electron transfer from two [CrIIIL(OH)]n?1 ions to I(VII) is proposed. The two [CrIIIL(OH)]n?1 ions are bridged to I(VII) via the hydroxo group. Periodate ion is known to undergo rapid substitution or expansion of its coordination number from four to six. The activation parameters ΔH* and ΔS* were calculated using the Eyring equation. The relatively high negative values of ΔS* are consistent with an associative process preceding electron transfer. © 2012 Wiley Periodicals, Inc. Int J Chem Kinet 44: 729–735, 2012  相似文献   

15.
N,N′‐dioxide ligands such as 2, 2′‐bipyridine‐N,N‐dioxide (BPDO‐I) and 4, 4′‐bipyridine‐N,N‐dioxide (BPDO‐II) were used to trap the hydrated dimethyltin cations under controlled hydrolysis. The use of the chelating ligand BPDO‐I leads to the isolation of the discrete monocation [Me2Sn(BPDO‐I)(OH2)(NO3)]+[NO3] ( 2 ), whereas the linear ligand BPDO‐II directs the construction of cationic polymers, [{Me2Sn(OH2)2(μ‐BPDO‐II)}2+{NO3}2 · 2H2O]n ( 3· 2H2O) and [{Me2Sn(μ‐OH)(BPDO‐II)}22+{NO3}2 · H2O]n ( 4· H2O) under different reaction conditions.  相似文献   

16.
The title complex, [Cu(C12H9N2O)(C2H3O2)(C12H10N2O)], is a neutral CuII complex with a primary N3O2 coordination sphere. The Cu centre coordinates to both a deprotonated and a neutral molecule of N‐phenylpyridine‐2‐carboxamide and also to an acetate anion. The coordination around the metal centre is asymmetric, the deprotonated ligand providing two N donor atoms [Cu—N = 1.995 (2) and 2.013 (2) Å] and the neutral ligand providing one N and one O donor atom to the coordination environment [Cu—N = 2.042 (2) Å and Cu—O = 2.2557 (19) Å], the fifth donor being an O atom of the acetate ion [Cu—O = 1.9534 (19) Å]. The remaining O atom from the acetate ion can be considered as a weak donor atom [Cu—O = 2.789 (2) Å], conferring to the Cu complex an asymmetric octahedral geometry. The crystal structure is stabilized by intermolecular N—H...O, C—H...O and C—H...π interactions.  相似文献   

17.
Comparison of the structures of strychninium N‐phthaloyl‐β‐alaninate N‐phthaloyl‐β‐alanine, C21H23N2O2+·C11H8NO4·C11H9NO4, and brucinium N‐phthaloyl‐β‐alaninate 5.67‐hydrate, C23H27N2O4+·C11H8NO4·5.67H2O, reveals that, unlike strychninium cations, brucinium cations display a tendency to produce stacking inter­actions with cocrystallizing guests.  相似文献   

18.
The copper sulfide mineral flotation collector, N‐n‐butyl‐N′‐ethoxycarbonyl‐thiourea (H2bectu), and the 1:1 hexameric copper(I) thioureate complex, [Cu(Hbectu)]6, have been characterized by single crystal X‐ray diffraction. H2bectu crystallizes in the triclinic space group with a = 5.2754(4), b = 9.0042(7), c = 12.6030(9) Å, α = 80.528(6), β = 90.173(6), γ = 76.472(7)°. An intramolecular N‐H···O hydrogen bond between the thioamide proton and carbonyl oxygen forms a planar six‐membered ring in the central core of the molecule with C=O, C=S and C‐N bond lengths in accord with those reported for other N‐alkyl/aryl‐N′‐acyl‐thiourea compounds. [Cu(Hbectu)]6 crystallizes in the monoclinic space group C2/c with a = 23.269(5), b = 13.243(4), c = 23.037(7) Å, β = 91.81(2)° as discrete hexameric clusters disposed about a crystallographic centre of symmetry with a Cu6S6 core consisting of two Cu3S3 chair‐shaped rings linked by coordination of the deprotonated amide nitrogen atom to a copper atom in the adjacent ring. The six ligands assemble as a paddlewheel structure with the ethoxy and n‐butyl substituents packing in an alternating head to tail arrangement. Temperature dependent solution 1H NMR spectroscopic studies show that the hexameric structure of the complex is maintained in solution.  相似文献   

19.
The bromo‐substituted aromatic dicarboxylic acid 5‐amino‐2,4,6‐tribromoisophthalic acid (H2ATBIP) was used to assemble with CdII ions in the presence of the N‐donor flexible bipyridyl ligands 3,3′‐(diazene‐1,2‐diyl)dipyridine (mzpy) and 1,3‐bis(pyridin‐3‐ylmethyl)urea (3bpmu), leading to the formation of two chain coordination polymers by adopting solution methods, namely, catena‐poly[[[triaqua(5‐amino‐2,4,6‐tribromoisophthalato‐κO)cadmium(II)]‐μ‐3,3′‐(diazene‐1,2‐diyl)dipyridine‐κ2N1:N1′] dihydrate], {[Cd(C8H2Br3NO4)(C10H8N4)(H2O)3]·2H2O}n or {[Cd(ATBIP)(mzpy)(H2O)3]·2H2O}n, ( 1 ), and catena‐poly[[[tetraaquacadmium(II)]‐μ‐1,3‐bis(pyridin‐3‐ylmethyl)urea‐κ2N1:N1′‐[diaquabis(5‐amino‐2,4,6‐tribromoisophthalato‐κO)cadmium(II)]‐μ‐1,3‐bis(pyridin‐3‐ylmethyl)urea‐κ2N1:N1′] octahydrate], {[Cd(C8H2Br3NO4)(C12H12N4O)(H2O)3]·4H2O}n or {[Cd(ATBIP)(3bpmu)(H2O)3]·4H2O}n, ( 2 ). Both complexes were characterized by FT–IR spectroscopic analysis, thermogravimetric analysis (TGA), solid‐state diffuse reflectance UV–Vis spectroscopic analysis, and single‐crystal and powder X‐ray diffraction analysis (PXRD). The mzpy and 3bpmu ligands bridge the CdII metal centres in ( 1 ) and ( 2 ) into one‐dimensional chains, and the ATBIP2− ligands show a monodentate coordination to the CdII centres in both coordination polymers. A discrete water tetramer exists in ( 1 ). Within the chains of ( 1 ) and ( 2 ), there are halogen bonds between adjacent ATBIP2− and mzpy or 3bpmu ligands, as well as hydrogen bonds between the ATBIP2− ligands and the coordinated water molecules. With the aid of weak interactions, the structures of ( 1 ) and ( 2 ) are further extended into three‐dimensional supramolecular networks. An analysis of the solid‐state diffuse reflectance UV–Vis spectra of ( 1 ) and ( 2 ) indicates that a wide indirect band gap exists in both complexes. Complexes ( 1 ) and ( 2 ) exhibit irreversible and reversible dehydration–rehydration behaviours, respectively, and the solid‐state fluorescence properties of both complexes have been studied.  相似文献   

20.
Synthesis and Structure of N,N,N?,N?‐Tetraisobutyl‐N′,N″‐isophthaloylbis(thiourea) and Dimethanol‐bis(N,N,N?,N?‐tetraisobutyl‐N′,N″‐isophthaloylbis(thioureato))dicobalt(II) The synthesis and the crystal structure of the ligand N,N,N?,N?‐tetraisobutyl‐N′,N″‐isophthaloylbis(thiourea) and its CoII‐complex are reported. The ligand co‐ordinates quadridentately forming a di‐bischelate. The donor atoms O and S are arranged in cis‐position around the central CoII ions. In addition the co‐ordination geometry is determined by methanol molecules resulting in the co‐ordination number five. The complex crystallizes in the space group P1 (Z = 1) with two additional methanol molecules per formula unit. The free ligand crystallizes in the space group P1 (Z = 2) with one methanol molecule per formula unit. It shows the typical keto form of N‐acylthioureas with a protonated central N atom. The structures of both acylthiourea fragments come close to E,Z′‐configurations.  相似文献   

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