Synthesis,characterization and interaction of mixed polypyridyl ruthenium(II) complexes with calf thymus DNA

New mixed polypyridyl {HPIP = 2-(2-hydroxyphenyl)imidazo[4,5-f][1,10]phenanthroline, phen = 1,10-phenanthroline, dmp = 2,9-dimethyl-1,10-phenanthroline, dmb = 4,4-dimethyl-2,2-bipyridine} ruthenium(II) complexes [Ru(phen)₂(HPIP)]²⁺, [Ru(dmp)₂(HPIP)]²⁺ and [Ru(dmb)₂(HPIP)]²⁺ were synthesized and characterized by elemental analyses ¹H-n.m.r., u.v.–vis. spectroscopy and cyclic voltammetry. Their DNA-binding properties were demonstrated by absorption, luminescence titrations, steady-state emission quenching and viscosity measurements. The results suggested that all the examined complexes bind with CT-DNA intercalatively. Methyl groups substituted at the 4,4-positions of bpy has no obvious effect on its DNA binding, whereas substituents at the 2- and 9-positions of phen have an impressive effect on its DNA-binding, as revealed by the decreased binding affinity.     

Exploring the interaction of ruthenium(II) polypyridyl complexes with DNA using single-molecule techniques

Here we explore DNA binding by a family of ruthenium(II) polypyridyl complexes using an atomic force microscope (AFM) and optical tweezers. We demonstrate using AFM that Ru(bpy)2dppz2+ intercalates into DNA (K(b) = 1.5 x 10(5) M(-1)), as does its close relative Ru(bpy)2dppx2+ (K(b) = 1.5 x 10(5) M(-1)). However, intercalation by Ru(phen)3(2+) and other Ru(II) complexes with K(b) values lower than that of Ru(bpy)2dppz2+ is difficult to determine using AFM because of competing aggregation and surface-binding phenomena. At the high Ru(II) concentrations required to evaluate intercalation, most of the DNA strands acquire a twisted, curled conformation that is impossible to measure accurately. The condensation of DNA on mica in the presence of polycations is well known, but it clearly precludes the accurate assessment by AFM of DNA intercalation by most Ru(II) complexes, though not by ethidium bromide and other monovalent intercalators. When stretching individual DNA molecules using optical tweezers, the same limitation on high metal concentration does not exist. Using optical tweezers, we show that Ru(phen)2dppz2+ intercalates avidly (K(b) = 3.2 x 10(6) M(-1)) whereas Ru(bpy)3(2+) does not intercalate, even at micromolar ruthenium concentrations. Ru(phen)3(2+) is shown to intercalate weakly (i.e., at micromolar concentrations (K(b) = 8.8 x 10(3) M(-1))). The distinct differences in DNA stretching behavior between Ru(phen)3(2+) and Ru(bpy)3(2+) clearly illustrate that intercalation can be distinguished from groove binding by pulling the DNA with optical tweezers. Our results demonstrate both the benefits and challenges of two single-molecule methods of exploring DNA binding and help to elucidate the mode of binding of Ru(phen)3(2+).     

Synthesis, characterization and electrochemical studies of mixed ligand complexes of ruthenium(ii) with DNA

Two mixed ligand complexes of ruthenium(ii) [Ru(bzimpy)(bpy)(OH(2))](2+) (1) and [Ru(bzimpy)(phen)(OH(2))](2+) (2) have been synthesized and characterized by FAB mass, (1)H NMR, cyclic voltammetry and spectroelectrochemical measurements. Controlled potential electrolysis of these complexes results in the conversion of ruthenium(ii) to ruthenium(iii) at 0.6 V and ruthenium(iii) to ruthenium(iv) at 0.8 V vs. SCE. The binding constant of these complexes with DNA has been determined electrochemically and found to be (3.58 +/- 0.25) x 10(4) and (2.87+/- 0.2) x 10(4) M(-1). Viscosity measurements suggest that these complexes bind with DNA through intercalation. Such intercalative binding to DNA has been found to induce chirality to the two complexes. Electrochemically generated ruthenium(iv) species of these complexes have been found to bring about oxidative cleavage in DNA.     

Synthesis,characterization and DNA binding studies of two cyclopentadienyl ruthenium(II) complexes with amino acid ligands

Two new half-sandwich cyclopentadienyl ruthenium(II) complexes containing α-amino acids, [CpRu(PPh₃)₂(Ser)] (Ser = l-serine) and [CpRu(PPh₃)(Met)] (Met = l-methionine), were synthesized and characterized by physicochemical methods. Interactions of these two complexes with calf thymus DNA were investigated by UV–Vis absorption spectroscopy, emission spectroscopy and competitive binding studies. The results indicate that both complexes can interact with DNA, leading to the damage of the double helix. [CpRu(PPh₃)₂(Ser)] binds to DNA by intercalation, while the binding mode for [CpRu(PPh₃)(Met)] is more complicated due to the formation of an EB-DNA-complex (EB = ethidium bromide). The affinity of the Met complex for DNA is stronger than that of the Ser complex, which could be due to groove–surface combination or electrostatic interaction in addition to intercalative binding.     

Di- and tetranuclear ruthenium(II) and/or osmium(II) complexes of polypyridyl ligands bridged by a fully conjugated aromatic spacer: synthesis,characterization, and electrochemical and photophysical studies

A series of mono-, di-, and tetranuclear homo/heterometallic complexes of Ru(II) and Os(II) based on the bridging ligand dppz(11-11')dppz (where dppz = dipyrido[3,2-a:2',3'-c]phenazine) (BL) have been synthesized and characterized. This bridging ligand is a long rigid rod with only one rotational degree of freedom and provides complete conjugation between the chromophores. The complexes synthesized are of general formula [(bpy)(2)Ru-BL](2+), [(phen)(2)/(bpy)(2)M-BL-M(bpy)(2)/(phen)(2)](4+) (M = Ru(II) and Os(II)), [(bpy)(2)Ru-BL-Os(bpy)(2)](4+), and [((bpy)(2)Ru-BL)(3)M](8+). Detailed (1)H NMR studies of these complexes revealed that each chiral center does not influence its neighbor because of the long distance between the metal centers and the superimposed resonances of the diastereoisomers, which allowed the unambiguous assignment of the signals, particularly for homonuclear complexes. Concentration-dependent (1)H NMR studies show molecular aggregation of the mono- and dinuclear complexes in solution by pi-pi stacking. Electrospray mass spectrometry data are consistent with dimerization of mono- and dinuclear complexes in solution. Electrochemical studies show oxidations of Ru(II) and Os(II) in the potential ranges +1.38 to +1.40 and +0.92 to +1.01 V, respectively. The bridging ligand exhibits two one-electron reductions, and it appears that the added electrons are localized on the phenazene moieties of the spacer. All of these complexes show strong metal-to-ligand charge-transfer (MLCT) absorption and (3)MLCT luminescence at room temperature. Quantum yields have been calculated, and the emission lifetimes of all complexes have been measured by laser flash photolysis experiments. The luminescence intensity and lifetime data suggest that the emission due to the Ru center of the heteronuclear complexes is strongly quenched (>90%) compared to that of the corresponding model complexes. This quenching is attributed to intramolecular energy transfer from the Ru(II) center to the Os(II) center (k = (3-5) x 10(7) s(-1)) across the bridging ligand.     

Mono- and dinuclear ruthenium carbonyl complexes with redox-active dioxolene ligands: electrochemical and spectroscopic studies and the properties of the mixed-valence complexes

The mononuclear complex [Ru(PPh(3))(2)(CO)(2)(L(1))] (1; H(2)L(1) = 7,8-dihydroxy-6-methoxycoumarin) and the dinuclear complexes [[Ru(PPh(3))(2)(CO)(2)](2)(L(2))][PF(6)] [[2][PF(6)]; H(3)L(2) = 9-phenyl-2,3,7-trihydroxy-6-fluorone] and [[Ru(PBu(3))(2)(CO)(2)](2)(L(3))] (3; H(4)L(3) = 1,2,3,5,6,7-hexahydroxyanthracene-9,10-dione) have been prepared; all complexes contain one or two trans,cis-[Ru(PR(3))(2)(CO)(2)] units, each connected to a chelating dioxolene-type ligand. In all cases the dioxolene ligands exhibit reversible redox activity, and accordingly the complexes were studied by electrochemistry and UV/vis/NIR, IR, and EPR spectroscopy in their accessible oxidation states. Oxidation of 1 to [1](+) generates a ligand-centered semiquinone radical with some metal character as shown by the IR and EPR spectra. Dinuclear complexes [2](+) and 3 show two reversible ligand-centered couples (one associated with each dioxolene terminus) which are separated by 690 and 440 mV, respectively. This indicates that the mixed-valence species [2](2+) has greater degree of electronic delocalization between the ligand termini than does [3](+), an observation which was supported by IR, EPR, and UV/vis/NIR spectroelectrochemistry. Both [2](2+) and [3](+) have a solution EPR spectrum consistent with full delocalization of the unpaired electron between the ligand termini on the EPR time scale (a quintet arising from equal coupling to all four (31)P nuclei); [3](+) is localized on the faster IR time scale (four CO vibrations rather than two, indicative of inequivalent [Ru(CO)(2)] units) whereas [2](2+) is fully delocalized (two CO vibrations). UV/vis/NIR spectroelectrochemistry revealed the presence of a narrow, low-energy (2695 nm) transition for [3](+) associated with the catecholate --> semiquinone intervalence transition. The narrowness and solvent-independence of this transition (characteristic of class III mixed-valence character) coupled with evidence for inequivalent [Ru(CO)(2)] termini in the mixed-valence state (characteristic of class II character) place this complex at the class II-III borderline, in contrast to [2](2+) which is clearly class III.     

Solvent extraction studies on the mixed ligand complexes of lanthanides with antipyrine and perchlorate

Lanthanide ions are found to form colourless mixed-ligand complexes with antipyrine in presence of perchlorate at pH 4.0, and these are quantitatively extractable into nitrobenzene. The composition of the extracted species is shown to be metal:antipyrine:perchlorate = 1:6:3. The variation of the extraction constants with atomic number of the lanthanides is attributed to the "tetrad effect".     

Synthesis and spectroscopic studies of some halogen-dimethylsulphoxide/tetramethylenesulphoxide-ruthenium(II) and ruthenium(III) complexes with 2-aminobenzimidazole

Synthesis and characterization of seven ruthenium(II) and ruthenium(III) complexes of sulphoxide with 2-aminobenzimidazole are reported. Three different formulations exist; [cis-RuCl₂(SO)₃(2-ABZ)]; [trans-RuCl₂(SO)₃)(2-ABZ)]; and [trans-RuCl₄(SO)(2-ABZ (where SO?=?dimethylsulphoxide(DMSO)/tetramethylenesulphoxide(TMSO); 2-ABZ?=?2-aminobenzimidazole). These complexes are characterized by elemental analysis, conductivity magnetic susceptibility, ¹H-NMR, ¹³C{¹H}-NMR and electronic spectroscopy.     

Synthesis of Pd complexes combined with photosensitizing of a ruthenium(II) polypyridyl moiety through a series of substituted bipyrimidine bridges. Substituent effect of the bridging ligand on the photocatalytic dimerization of alpha-methylstyrene

Mononuclear ruthenium complexes and dinuclear Ru...Pd complexes having a series of 2,2'-bipyrimidine ligands, [(bpy)2Ru(Ln)]2+ [Ln = 2,2'-bipyrimidine (L1), 5,5'-dimethyl-2,2'-bipyrimidine (L2), 5,5'-dibromo-2,2'-bipyrimidine (L3), 4,4'-dimethyl-2,2'-bipyrimidine (L4), and 4,4',6,6'-tetramethyl- 2,2'-bipyrimidine (L5)] and [(bpy)2Ru(Ln)PdL]m+ [Ln = L1-L3; PdL = PdMeCl (m = 2) and PdMe(solvent) (m = 3)], are prepared, and the obtained complexes are characterized by means of spectroscopic and crystallographic methods. Introduction of the substituents on the bipyrimidine ligands led to the substantial differences in their electrochemical and photophysical properties. Density functional theory calculations have been performed to understand the substituent effect on the ground-state molecular orbital energy level. Reactivity studies on the catalytic dimerization of alpha-methylstyrene revealed that the Pd complex having a Br-substituted bipyrimidine ligand were much more active than those of the corresponding Pd complexes having methyl-substituted or nonsubstituted bipyrimidine ligands.     

Cuprous complexes and dioxygen. VIII. Steric factors controlling one- or two-electron reduction of O2 by cuprous complexes with substituted imidazoles

In aqueous acetonitrile (AN), Cu (I) forms the complexes Cu(AN)L⁺ and CuL with a series of substituted imidazoles (L). Stability constants logK of Cu(AN)⁺ + L ? Cu(AN)L⁺ and logβ₂ were near 5 and 12, resp., log units for all ligands. The rate of autoxidation is described by ?d[O₂]/dt=[CuL]²[O₂](k_a/(1+k_b[CuL]) + (k_c[L]+k_d)/([CuL] + k_e[Cu])), implying competition between one- or two-electron reduction of O₂. The value of k_c decreases from 5500M ^?2S ^?1 for unsubstituted imidazole to about 40M ^?2S ^?1 for 2-methylimidazole or 1,2-dimethyl-imidazole and essentially zero for the corresponding 2-ethyl-derivatives. On the other hand, k_a and k_b are much less influenced by the nature of the ligands, all values being near 5 · 10⁴M ^?2S ^?1 and 10³M ^?1, respectively, for the complexes with the last four bases. Thus rather subtle sterical changes may strongly influence the relative importance of different pathways in the reduction of dioxygen by cuprous complexes.     

DNA cleavage by the photolysis of cyclopentadienyl metal complexes: mechanistic studies and sequence selectivity of strand scission by CpW(CO)3CH3

[Reaction: see text]. The photolysis of CpW(CO)3Me has been shown to produce methyl radicals and to cleave DNA in a single-stranded manner, and preliminary evidence implicated a carbon-centered radical in this process. In this work, the mechanism of strand scission in this reaction was determined to occur by hydrogen atom abstraction from the 4'- and 5'-positions of the deoxyribose moiety of the backbone of DNA. Additionally, in a side reaction that does not lead to frank strand scission, all four bases of DNA are methylated under these conditions; however, none of these base or backbone modifications lead to the formation of abasic sites.     

Role of steric and thermodynamic factors in the quenching of the luminescence of ruthenium trisdipyridyl complexes by aromatic electron donors and acceptors

Conclusions An increase in the length of the chain of aliphatic substituents in the ligands of ruthenium trisdipyridyl complexes is accompanied by a slight decrease in the rate quenching for the quenching of the luminescence of the complex by aromatic electron donors and acceptors due to steric effects.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 1, pp. 176–178, January, 1989.     

D-葡萄糖、乳糖Schiff碱锌(Ⅱ)配合物的合成及与DNA作用的电子光谱研究

D 葡萄糖、乳糖Schiff碱与醋酸锌通过固相反应合成了D 葡萄糖缩水杨酰肼锌(Ⅱ)[Zn(C13H17N2O7)2]和乳糖缩对羟基苯甲酰肼锌(Ⅱ)[Zn(C19H27N2O12)·(CH3COO)·2H2O]配合物。用元素分析、MS、IR、1HNMR和TGA DTA进行了结构表征。电子光谱研究表明:目标配合物与DNA可发生一定的插入作用。     

In vitro antimicrobial-activity studies on the mixed ligand complexes of Hg(II) with 8-hydroxyquinoline and salicylic acids

A series of mixed ligand complexes of Hg(II) with the general formula Hg (OX) (SA) (where OX: 8-hydroxyquinoline, SA: salicylic, 5-chloro-, 3,5-dibromo, 3,5-diiodo, 3,5-dinitro, acetyl thiosalicylic acids) are isolated in pure state and characterised by elemental analysis and infrared data. The low molar conductance of the complexes in dimethylformamide indicates non-electrolyte nature. The antimicrobial activity of these complexes against various bacteria and fungi is studied which indicates that in several cases, the mixed ligand complexes possess fairly highly antimicrobial activity than the binary mercury-oxinate. The lipophilic tendency of these complexes and its influence on the antimicrobial activity is critically examined. A probable mechanism for the toxic action of these complexes against various organisms is discussed.     

Spectral and electrochemical studies of ruthenium(II) complexes with N-methyl-4-nitrobenzaldehyde and N-methyl-4-nitrobenzophenone thiosemicarbazone: Potential anti-trypanosomal agents

N⁴-Methyl-4-nitrobenzaldehyde thiosemicarbazone (H4NO₂Fo4M), N⁴-methyl-4-nitrobenzophenone thiosemicarbazone (H4NO₂Bz4M) and their ruthenium(II) complexes [Ru(4NO₂Fo4M)₂(PPh₃)₂] (1), [Ru(4NO₂Bz4M)₂(PPh₃)₂] (2), [Ru(4NO₂Fo4M)₂(dppb)] (3) and [Ru(4NO₂Bz4M)₂(dppb)] (4) (dppb = 1,4-bis(diphenylphospine)butane) were obtained and characterized. The crystal structure of H4NO₂Fo4M has been determined. Electrochemical studies have shown that the nitro anion radical, one of the proposed intermediates in the mechanism of action of nitro-containing anti-trypanosomal drugs, is formed at approximately −1.00 V in the free thiosemicarbazones as well as in their corresponding ruthenium(II) complexes, suggesting their potential to act as antitrypanosomal drugs. The natural fluorescence of H4NO₂Fo4M, H4NO₂Bz4M and complexes (1)–(4) provides a way to identify and to monitor their concentration in biological systems.     

Synthesis and spectroelectrochemical studies of mixed heteroleptic chelate complexes of ruthenium(II) with 1,8-bis(2-pyridyl)-3,6-dithiaoctane (pdto) and substituted 1,10-phenanthrolines

Reaction of dichlorotris(triphenylphosphine) ruthenium(II) [RuCl(2)(PPh(3))(3)] with 1,8-bis(2-pyridyl)-3,6-dithiaoctane (pdto), a (N(2)S(2)) tetradentate donor, yields a new compound [Ru(pdto)(PPh(3))Cl]Cl (1), which has been fully characterized. (1)H and (31)P NMR studies of 1 in acetonitrile at several temperatures show the substitution of both coordinated chloride and triphenylphosphine with two molecules of acetonitrile, as confirmed by the isolation of the complex [Ru(pdto)(CH(3)CN)(2)]Cl(2) (2). Cyclic voltammetric and spectroelectrochemical techniques allowed us to determine the electrochemical behavior of compound 1. The substitution of the chloride and triphenylphosphine by acetonitrile molecules in the Ru(II) coordination sphere of compound 1 was also established by electrochemical studies. The easy substitution of this complex led us to use it as starting material to synthesize the substituted phenanthroline coordination compounds with (pdto) and ruthenium(II), [Ru(pdto)(4,7-diphenyl-1,10-phenanthroline)]Cl(2).4H(2)O (3), [Ru(pdto)(1,10-phenanthroline)]Cl(2).5H(2)O (4), [Ru(pdto)(5,6-dimethyl-1,10-phenanthroline)]Cl(2).5H(2)O (5), [Ru(pdto)(4,7-dimethyl-1,10-phenanthroline)]Cl(2).3H(2)O (6), and [Ru(pdto)(3,4,7,8-tetramethyl-1,10-phenanthroline)]Cl(2).4H(2)O (7). These compounds were fully characterized, and the crystal structure of 4 was obtained. Cyclic voltammetric and spectroelectrochemical techniques allowed us to determine their electrochemical behavior. The electrochemical oxidation processes in these compounds are related to the oxidation of ionic chlorides, and to the reversible transformation from Ru(II) to Ru(III). On the other hand, a single reduction process is associated to the reduction of the substituted phenanthroline in the coordination compound. The E(1/2) (phen/phen(-)) and E(1/2) (Ru(II)/Ru(III)) for the compounds (3-7) were evaluated, and, as expected, the modification of the substituted 1,10-phenanthrolines in the complexes also modifies the redox potentials. Correlations of both electrochemical potentials with pK(a) of the free 1,10-phenathrolines, lambda(max) MLCT transition band, and chemical shifts of phenanthrolines in these complexes were found, possibly as a consequence of the change in the electron density of the Ru(II) and the coordinated phenanthroline.     

Kinetics and mechanistic studies of the interaction of thiosulfate with cis-diaqua-bis[1-alkyl-2-(arylazo)imidazole]ruthenium(II) complexes

The nucleophilic substitution reaction of S₂O₃²⁻ with [Ru(HaaiR′)₂(OH₂)₂](ClO₄)₂ (1) [HaaiR′ = 1-alkyl-2-(phenylazo)imidazole] and [Ru(ClaaiR′)₂(OH₂)₂](ClO₄)₂ (2) [ClaaiR′ = 1-alkyl-2-(chlorophenylazo)imidazole] [where R′ = Me(a), Et(b) or Bz(c)] in acetonitrile–water (50% v/v) medium to yield Na₂[Ru(HaaiR′)₂(S₂O₃)₂] (3a, 3b or 3c) and Na₂[Ru(ClaaiR′)₂(S₂O₃)₂] (4a, 4b or 4c) has been studied. The products were characterized by microanalytical data and spectroscopic techniques (UV–Vis, NMR and mass spectroscopy). The reaction proceeds in two consecutive steps (A → B → C); each step follows first order kinetics with respect to each complex and S₂O₃²⁻, and the first step second order rate constant (k′₂) is greater than the second step one (k″₂). An increase in the π-acidity of the ligand increases the rate. Thermodynamic parameters, the standard enthalpy of activation (Δ^‡H⁰) and the standard entropy of activation (Δ^‡S⁰), have been calculated for both steps using the Eyring equation from variable temperature kinetic studies. The low Δ^‡H⁰ and large negative Δ^‡S⁰ values indicate an associative mode of activation for both aqua ligand substitution processes.