Electrochemical and Spectroscopic Study of the Interaction of Indirubin with DNA

The interaction of indirubin with DNA was studied by differential pulse voltammetry (DPV) and linear sweep voltammetry (LSV) at the bare or DNA‐modified electrode and UV‐vis or IR spectra. As a result of intercalating of this drug into the double helical structure of DNA, the DPV of indirubin shows that peak potentials shift and peak currents decrease with the addition of DNA. UV‐vis spectra exhibits that the absorption intensity of indirubin at 538.7 nm^?1 decreases, which indicates that the anticancer herbal drug indirubin binds DNA. In addition, IR‐spectra of DNA and DNA‐indirubin adduct imply indirubin interacts with the phosphate groups of DNA by hydrogen bond or electrostatic interaction. Under our experiment conditions, the decrease of peak current is proportional to DNA concentration, which can be applied to estimate DNA concentration. The results indicate that the herbal drug indirubin can interfere with the DNA by intercalating into the double helix of DNA and interacting with the phosphate groups of DNA.     

Cyclometalated iridium(III) complex of 6‐hydroxydipyrido[3,2‐a:2′,3′‐c]phenazine: synthesis,and acid–base and avid DNA binding properties

A new cyclometalated Ir(III) complex [Ir(ppy)₂(hdppz)]PF₆ (Hppy = 2‐phenylpyridine and hdppz = 6‐hydroxydipyrido[3,2‐a:2′,3′‐c]phenazine) was synthesized and characterized. The pH effects on the UV–vis absorption spectra were studied and ground‐state acid ionization constant pK_a values of the complex were derived. The calf thymus DNA (ct‐DNA) binding properties of the complex were investigated with UV‐vis absorption spectrophotometric titrations, DNA competitive binding with ethidium bromide, DNA melting experiments, viscosity measurements and density functional theory (DFT) calculations. The complex was demonstrated to act as a ct‐DNA intercalator with a large DNA binding constant value of (6.06 ± 0.32) × 10⁶ M ⁻¹ in 50 mM NaCl. The avid DNA binding affinity observed was rationalized by the DFT calculations. Copyright © 2011 John Wiley & Sons, Ltd.     

Electrochemical Studies of Oxidation of Lomefloxacin and Interaction with Calf Thymus DNA at Nano‐SnO2/DHP Modified Electrode

A nanoparticle thin film modified electrode has been constructed using a glassy carbon electrode (GCE) coated with a nano‐tin oxide/dihexadecylphosphate (nano‐SnO₂/DHP). In pH 6.0 phosphate buffer solutions (PBS), lomefloxacin (LMF) appeared as an anodic peak with peak potential of 1.35 V at nano‐SnO₂/DHP modified electrode. In comparison with a bare GCE or a nano‐SnO₂ modified electrode, the nano‐SnO₂/DHP modified electrode exhibited an enhanced effectiveness for the oxidation of LMF. Cyclic voltammetry (CVs) coupled with fluorescence and UV/vis absorbance spectra techniques were used to study the interaction of LMF with Calf thymus DNA (ctDNA) in phosphate buffer solutions (PBS). The interaction of LMF and ctDNA could result in a considerable decrease in the peak currents and positive shift in the peak potential, as well as changes of fluorescence, UV/vis adsorption spectra and gel electrophoresis. All the acquired data showed that the new adduct between LMF and ctDNA was formed. Electrochemistry coupled with spectroscopy techniques could provide a relatively easy way to obtain useful information about the molecular mechanism of LMF‐ctDNA interactions.     

5，10，15，20-四 [4-(4''-乙基哌嗪基)苯基]卟啉的合成及其与DNA的相互作用

基于卟啉对癌细胞的特殊亲和作用和哌嗪化合物的抗肿瘤、抗病毒作用，设计并合成了具有哌嗪结构的新型卟啉化合物5，10，15，20-四[4-(4'-乙基哌嗪基)苯基]卟啉（TEPPPH₂），其结构经UV-Vis, 元素分析，¹H NMR等手段证明。采用UV-Vis光谱和荧光光谱研究了TEPPPH₂和小牛胸腺DNA 的相互作用模式和结合机理。实验发现，TEPPPH₂能嵌入到DNA的碱基对中，1个小牛胸腺DNA分子对TEPPPH₂分子的最大结合数n约为88，结合常数为8.4×10⁶mol•L^-1 。TEPPPH₂与DNA的结合数和结合常数大于已知的四（4-N-甲基吡啶基）卟啉和Ca/sal-his、Ni/sal–aln型席夫碱抗癌药物。     

Electrochemical Properties of a Conducting Film Derived from Iron(II) Tris(diaminopolypyridyl) Complex in the S(IV) Oxoanions Reduction

A new conducting film derived from the complex [Fe (diaphen)₃]²⁺, (diaphen=5,6‐diamino‐1,10‐phenanthroline) was electropolymerized by cyclic voltammetry onto a glassy carbon electrode. Poly‐[Fe^II (diaphen)₃] was studied by cyclic voltammetry, SEM, UV‐vis and micro‐Raman spectroscopy. Poly‐[Fe^II (diaphen)₃] shows electrocatalytic activity in HSO₃^? reduction in an ethanol/water solution. Electrocatalysis is centered at the π ring of phenanthroline. Rotating disk electrode studies showed a 0.117 V/dec Tafel slope, suggesting an EC process where the electrochemical process is the determining step. The chemical step was studied by UV‐vis spectroelectrochemistry. Amperometric behavior showed a linear range between 47.5 µM to 417 µM and the LOD was 19.5 µM.     

DNA-binding Studies of Daunorubicin in the Presence of Methylene Blue by Spectroscopy and Voltammetry Techniques

The interaction of daunorubicin with calf thymus DNA has been investigated with the use of methylene blue dye as a spectral probe by the application of UV-Vis spectrophotometry, spectrofluorometry and voltammetry. The voltammetric behavior of daunorubicin has been investigated at a glassy carbon electrode using cyclic and differential pulse voltammetry. Both UV-vis spectrophotometry and cyclic voltammetry studies confirmed the intercalation reaction. The results showed that both daunorubicin and methylene blue molecules could intercalate into the double helix of DNA. The apparent binding constant of daunorubicin with DNA has been found to be 7.8 ×104 L•mol－1. The fluorescence signal of daunorubicin and methylene blue was quenched with DNA addition. The Stern-Volmer equation was plotted based on the quenching fluorescence signal of daunorubicin.     

Self‐Assembled Multilayers of Polyethylenimine and DNA: Spectrophotometric and Electrochemical Characterization and Application for the Determination of Acridine Orange Interaction

This work deals with the study of the interaction between acridine orange (AO) and calf‐thymus double stranded DNA (dsDNA) present in supramolecular architectures built on gold electrodes modified with mercapto‐1‐propanesulfonic acid (MPS) by self‐assembling of polyethylenimine and dsDNA. The optimal conditions for building the supramolecular architecture were obtained from UV‐vis spectrophotometric experiments. The electrochemical studies were performed by adsorptive transfer square wave voltammetry from the evaluation of the oxidation signal of AO accumulated within the multistructure. The effect of the number of PEI‐dsDNA bilayers (Au/MPS/(PEI‐dsDNA)_n) on the accumulation and electrooxidation of AO is also discussed.     

A Novel Cobalt(III) Mixed-polypyridyl Complex: Synthesis, Characterization and DNA Binding

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Synthesis and characterization of fluorescent copolymer containing rare earth metal complex and its interaction with DNA

A complex of Eu³⁺, acrylic acid (AA), and 1, 10‐phenanthroline (Phen) was synthesized. The structure and fluorescence of Eu(AA)₃Phen was characterized with elemental analysis, FTIR, ¹H NMR, and fluorescence spectroscopy. A novel copolymer containing rare earth complex, poly(PEGMA‐co‐NIPAm‐co‐Eu(AA)3Phen) (PPNEu), was prepared by free radical copolymerization in methanol with azodiisobutyronitrile as initiator. ¹H NMR, fluorescence spectroscopy, UV‐vis spectroscopy, and TEM were used to characterize this copolymer. The interaction of PPNEu with deoxyribonucleic acid (DNA) was studied by fluorescence spectroscopy, UV‐vis spectroscopy and agarose gel electrophoresis. The results of fluorescence, UV‐vis absorption, and agarose electrophoresis indicated that the PPNEu could interact with DNA in an electrostatic bonding mode. The TEM observation showed that the PPNEu could form spherical micelles in water solution small than 100 nm; the efficient complexation of PPNEu with DNA occurred. These results suggested the potential of the PPNEu as gene detective reagent and gene delivery carrier. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2010     

DNA Binding and Cleavage Activity of cis‐Cobalt Aromatic Oxime Complexes and Its Pyridine/imidazole Adducts

cis‐Cobalt complexes with salicycaldoxime(SAO), (Z)‐1‐(2‐hydroxyphenyl)ethanonoxime (HEO), (Z)‐1‐(2,5‐dihydroxyphenyl)ethanonoxime (DEO), (Z)‐1‐(2,5‐dihydroxyphenyl)(phenyl)methanonoxime (DPO) and their adducts with pyridine (Py) and imidazole (Im) were synthesized and characterized by elemental analysis, magnetic susceptibility, UV‐Vis and IR spectra. The electrochemical studies were carried by cyclic voltammeter, the peak potential separation and formal potential of complexes were independent of sweep rate or scan rate (ν) indicating a quasi reversible one‐electron redox process. Absorption studies and thermal denature studies revealed that each of these octahedral complexes is an avid binder of calf thymus DNA. The apparent binding constants for mixed ligand complexes are in order of ～10³‐10³ M^?1. Based on the data obtained in the DNA binding studies a partial intercalative mode of binding is suggested for these complexes. The nucleolytic cleavage activity of parent complexes and their pyridine adduct were carried out on double stranded pBR322 circular plasmid DNA by using a gel electrophoresis experiment in the presence and absence of oxidant (H₂O₂). All the metal complexes show enhanced cleavage activity in presence of oxidant. The hydrolytic cleavage of DNA of Co(DEO)₂ and Co(DPO)₂ is evidenced from the control experiments showing discernable cleavage inhibition in the presence of the hydroxyl radical inhibitor DMSO and EDTA.     

Studies on the Electrochemical Property of Dinuclear Copper(II) Complex Containing Dimethylglyoxime and Its Interaction with DNA

The electrochemical property of dinuclear copper(II) complex containing dimethylglyoxime [Cu₂(Hdmg)₄] was studied with cyclic voltammetry. Cu₂(Hdmg)₄ had an irreversible oxidation peak in pH 5.0 B–R buffer solution at the stearic acid‐modified carbon paste electrode. Cyclic voltammetry, UV‐vis absorption spectra and viscosity measurements were used to study the interaction of Cu₂(Hdmg)₄ with herring fish sperm DNA. Cu₂(Hdmg)₄ interacts with the bases of DNA to form nonelectroactive adducts. The interaction of Cu₂(Hdmg)₄ with ssDNA was stronger than that of Cu₂(Hdmg)₄ with dsDNA because of the exposed bases of ssDNA. The gene sequence related to the BAR transgene in the transgenic corn was detected using Cu₂(Hdmg)₄ as electroactive indicator.     

Synthesis,spectral characterization,electrochemical studies and catalytic properties in Suzuki–Miyaura coupling reactions of the mononuclear PdII,trinuclear PdII(BPh2)2 and RuII?PdII?RuII type complexes containing 4‐amino‐1‐benzyl piperidine and phenyl groups

The ligand containing the 4‐amino‐1‐benzyl piperidine group, N, N′‐(4‐amino‐1‐benzyl piperidine)‐glyoxime, (LH₂) (1) was prepared from 4‐amino‐1‐benzyl piperidine with anti‐dichloroglyoxime at ? 15 °C in absolute Tetrahydrofuran (THF). In the trinuclear [Pd(L)₂Ru₂(phen)₄](ClO₄)₂ (4) and [Pd(L)₂Ru₂(bpy)₄](ClO₄)₂ (5) metal complexes, the Pd^II ion centered into the main oxime core by the coordination of the imino groups while the two Ru^II ions coordinated dianionic oxygen donors of the oxime groups and linked to the ligands of 1,10‐phenanthroline and 2,2′‐bipyridine. The mono and trinuclear metal complexes were characterized by elemental analyses, FT‐IR, UV–vis, ¹H and ¹³C‐NMR spectra, magnetic susceptibility measurements, molar conductivity, cyclic voltammetry, mass spectra, X‐ray powder techniques and their morphology by SEM measurements. The cyclic voltammetric results show that the cathodic peak (E_pc) potential of (3) shifts towards more positive values compared with that of (2) as a result of the BPh₂⁺‐bridged complex formation. The Suzuki–Miyaura reaction was used to investigate their activity as catalyst either prepared in‐situ or from well‐defined complexes. Copyright © 2008 John Wiley & Sons, Ltd.     

Study on optical recognition and electrochemical sensing of a 1,1′‐ferrocenedicarbonylhydrazine derivative for fluoride

A new compound, 1,1′‐di‐(p‐nitrophenylhydrazino‐β‐carbonyl)‐ferrocene ( 1 ) was designed as an anion receptor based on its hydrogen bonding interaction with anions. Investigation of UV–vis spectra showed that it was an excellent optical sensors for F^?. Furthermore, the nature of interaction between it and F^? was investigated by ¹H NMR titration experiments. In addition, the efficiency of the receptor applied as an electrochemical sensor for F^? was discussed by cyclic voltammetry (CV). Copyright © 2008 John Wiley & Sons, Ltd.     

Interactions of Dissolved dsDNA with Intercalating Drug by Anodic Voltammetry and Spectroscopy. Influence of pH

The interactions of C‐1305 (5‐dimethylaminopropylamino‐8‐hydroxy‐6H‐v‐triazolo[4,5,1‐de]acridin‐6‐one) with DNA were studied using differential pulse voltammetry and UV‐vis spectroscopy. C‐1305 interacts with dsDNA in two ways: by intercalation and by binding to the minor‐groove. For the intercalation at physiological pH (7.4) the values of the binding constant, K₁, and the binding‐site size, n₁, equal 3.36×10⁵ M^?1 and 2.5, respectively. For the weak interactions the K₂ and n₂ parameters equal 0.18×10⁵ M^?1 and 4. In the presence of excess NaCl the weak interactions do not vanish, therefore they are assigned to the minor groove binding. Substantial and complex is the influence of pH.     

Voltammetric,UV–Vis Spectrometric and Fluorescence Study of the Interaction of Ractopamine and DNA with the Aid of Multivariate Curve Resolution‐Alternating Least Squares

Interaction of a steroid drug, Ractopamine (RAC), and DNA was investigated by electroanalysis‐differential pulse and cyclic voltammetry (DPV and CV), and UV‐vis and fluorescence spectroscopy. DPV showed that RAC intercalated with DNA, and CV indicated that the reaction mechanism of RAC and dsDNA involved irreversible oxidation with the loss of two H⁺ and a transfer of two electrons. Reaction binding parameters were obtained. Pure spectra of RAC, DNA and the RAC‐DNA complex, and their concentrations were extracted by multivariate curve resolution‐alternating least squares method (MCR‐ALS). Concentration profiles indicated quantitatively the course of the reaction.     

Voltammetric and spectroscopic investigations of 4-nitrophenylferrocene interacting with DNA

Cyclic voltammetry (CV) coupled with UV–vis and fluorescence spectroscopy were used to probe the interaction of potential anticancer drug, 4-nitrophenylferrocene (NFC) with DNA. The electrostatic interaction of the positively charged NFC with the anionic phosphate of DNA was evidenced by the findings like negative formal potential shift in CV, ionic strength effect, smaller bathochromic shift in UV–vis spectroscopy, incomplete quenching in the emission spectra and decrease in viscosity. The diffusion coefficients of the free and DNA bound forms of the drug were evaluated from Randles–Sevcik equation. The binding parameters like binding constant, ratio of binding constants (K_red/K_ox), binding site size and binding free energy were determined from voltammetric data. The binding constant was also determined from UV–vis and fluorescence spectroscopy with a value quite close to that obtained from CV.     

Novel triarylamine‐based alternating conjugated polymer with high hole mobility: Synthesis,electro‐optical,and electronic properties

Novel bi‐triphenylamine‐containing aromatic dibromide M3 , N,N‐bis(4‐bromophenyl)‐N′,N′‐dipheny‐l,4‐phenylenediamine, was successfully synthesized. The novel conjugated polymer P1 having number‐average molecular weight of 1.31 × 10⁴ was prepared via Suzuki coupling from the dibromide M3 and 9,9‐dioctylfluorene‐2,7‐diboronic acid bis(1,3‐propanediol) ester. Polymer P1 had excellent thermal stability associated with a high glass‐transition temperature (T_g = 141 °C). The hole‐transporting and UV‐vis‐near‐infrared electrochromic properties were examined by electrochemical and spectroelectrochemical methods. Cyclic voltammograms of the conjugated polymer films cast onto indium‐tin oxide‐coated glass substrates exhibited two reversible oxidation redox couples at E_1/2 values of 0.73 and 1.13 V versus Ag/Ag⁺ in acetonitrile solution. The hole mobility of the conjugated polymer P1 revealed ～10^?3 cm² V^?1 s^?1, which is much higher than that of other conjugated polymer systems. The observed UV‐vis‐near‐infrared absorption change in the conjugated polymer film P1 at applied potentials ranging from 0.00 to 1.23 V are fully reversible and associated with strong color changes from pale yellowish in its neutral form to green and blue in its oxidized form. Using a combination of experimental study and theoretical investigation, we proposed an oxidation mechanism based on molecular orbital theory, which explains the cyclic voltammetry experimental results well. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2010     

Electrochemical Study on the Interaction of Irinotecan with Calf Thymus Double Stranded DNA

Voltammetric behavior of Irinotecan (CPT‐11) was studied in a phosphate buffer (0.002 mol·L^?1, pH 7.5) solution at the hanging mercury drop electrode (HMDE) using cyclic voltammetry (CV). CPT‐11 showed two irreversible cathodic peaks at ?1.01 V and ?1.09 V which involved two electrons and two protons in each reduction step. In addition, the interaction of Irinotecan with double‐stranded calf thymus DNA (ds‐DNA) was studied by CV at the HMDE employing an irreversible electrochemical equation. As a result of the reaction with ds‐DNA, the reduction peaks related to CPT‐11 were shifted in a negative direction and the peak currents were decreased. The diffusion coefficients of CPT‐11 in the absence (D_f) and presence (D_b) of ds‐DNA were calculated as 2.8×10^?5 cm²·s^?1 and 1.6×10^?5 cm²·s^?1 respectively. The binding constant (K=1.0×10⁴ L·mol^?1), and binding site size (s=0.60) of CPT‐11 interacting with ds‐DNA were obtained simultaneously by non‐linear fit analysis. The results demonstrate that the main interaction mode of CPT‐11 with ds‐DNA is electrostatic.     

Antibacterial Activities and Nuclease Properties of Two New Ternary Copper(II) Complexes with 2‐(4′‐Thiazolyl)‐benzimidazole and 2,2′‐Bipyridine/1,10‐phenanthroline

Two new complexes: [Cu(TBZ)(bipy)Cl]Cl·H₂O ( 1 ) and [Cu(TBZ)(phen)Cl]Cl·H₂O ( 2 ) [TBZ=2‐(4′‐thiazolyl)‐ benzimidazole, phen=1,10‐phenanthroline and bipy=2,2′‐bipyridine] have been synthesized and characterized by elemental analysis, molar conductivity, IR, and UV‐vis methods. Complex 2 , structurally characterized by single‐crystal X‐ray crystallography, crystallizes in the monoclinic space group P2₁/c in a unit cell of a=0.85257(12) nm, b=2.5358(4) nm, c=1.15151(13) nm, β=118.721(8)°, V=2.183.2(5) nm³, Z=4, D_c=1.624 g·cm⁻³, µ=1.367 mm⁻¹. The complexes, free ligands and chloride copper(II) salt were each tested for their ability to inhibit the growth of two gram‐positive (B. subtilis and S. aureus) and two gram‐negative (Salmonella and E. coli) bacteria. The complexes showed good antibacterial activities against the microorganisms. The interaction between the complexes and calf thymus DNA in aqueous solution was investigated adopting electronic absorption spectroscopy, fluorescence spectroscopy, viscosity measurements and cyclic voltammetry. Results suggest that the two complexes can bind to DNA by intercalative mode. In addition, the result of agarose gel electrophoresis suggested that the complexes can cleave the plasmid DNA at physiological pH and room temperature. Mechanistic studies with different inhibiting reagents reveal that hydroxyl radicals, and a singlet oxygen‐like copper‐oxo species are all involved in the DNA scission process mediated by the complexes.