Nickel electrodes as a cheap and versatile platform for studying structure and function of immobilized redox proteins

Practical use of many bioelectronic and bioanalytical devices is limited by the need of expensive materials and time consuming fabrication. Here we demonstrate the use of nickel electrodes as a simple and cheap solid support material for bioelectronic applications. The naturally nanostructured electrodes showed a surprisingly high electromagnetic surface enhancement upon light illumination such that immobilization and electron transfer reactions of the model redox proteins cytochrome b₅ (Cyt b₅) and cytochrome c (Cyt c) could be followed via surface enhanced resonance Raman spectroscopy. It could be shown that the nickel surface, when used as received, promotes a very efficient binding of the proteins upon preservation of their native structure. The immobilized redox proteins could efficiently exchange electrons with the electrode and could even act as an electron relay between the electrode and solubilized myoglobin. Our results open up new possibility for nickel electrodes as an exceptional good support for bioelectronic devices and biosensors on the one hand and for surface enhanced spectroscopic investigations on the other hand.     

Evaluation of different mediator-modified screen-printed electrodes used in a flow system as amperometric sensors for NADH

This work presents a comparative study between two different methods for the preparation of mediator-modified screen-printed electrodes, to be used as detectors in a reliable flow injection system for the determination of the nicotinamide adenine dinucleotide (NADH) coenzyme. The best strategy was selected for the final development of compact biosensors based on dehydrogenase enzymes. For the first immobilisation strategy, different redox mediators were electropolymerised onto the SPE surface. The second immobilisation strategy was carried out using polysulfone–graphite composites, which were deposited by screen-printing technology onto the screen-printed electrode (SPE) surface. Both methods achieved an effective and reliable incorporation of redox mediators to the SPE configuration. Finally, a flow system for ammonium determination was developed using a glutamate dehydrogenase (GlDH)-Meldola's Blue (MB)-polysulfone-composite film-based biosensor.

The stability of the redox mediators inside the composite films as well as the negligible fouling effect observed on the electrode surface improve the repeatability and reproducibility of the sensors, important features for continuous analysis in flow systems. Furthermore, the optimised bio/sensors, incorporated in a flow injection system, showed good sensitivities and short response times. Such a good analytical performance together with the simple and fast sensor construction are interesting characteristics to consider the polysulfone-composite films as attractive electrochemical transducer materials for the development of new dehydrogenase-based SPEs.     

Evaluation of redox mediators for amperometric biosensors: Ru-complex modified carbon-paste/enzyme electrodes

The properties of reagentless amperometric biosensors are mainly governed by the interaction of the used redox enzyme and the redox mediators used to facilitate the electron-transfer reaction. Both the used redox mediators and the redox enzymes differ concerning their hydrophilicity and their properties within the matrix of a carbon-paste electrode. Since there is no general procedure which is applicable for any enzyme in combination with any redox mediator, optimisation is necessary for each possible combination. Three approaches for the development of biosensors were investigated using carbon-paste electrodes enriched with redox mediator as a base in all sensor architectures. A class of redox mediators with the common formula Ru(LL)(2)(X)(2) (where LL are 1,10-phenantroline or 2,2'-bipyridine type ligands, and X is an acido ligand) was investigated. In the first approach, enzymes were integrated into the carbon paste; in the second, the enzymes were adsorbed on the surface of the mediator-containing carbon-paste electrode and held in place by a Nafion film; and in the third approach, enzymes were entrapped in polymer films, which were electrochemically deposited onto the electrode's surface. The properties of the obtained biosensors strongly depend on the sensor architecture and the specific features of the used enzyme. Thus, our investigation using three different sensor architectures can provide valuable information about the possible interaction between a specific enzyme and a redox mediators with specific properties.     

Theoretical insights and design of Ru(II)-based complexes with DNA-photocleavage properties

A theoretical research on the properties of Ru(II)-based complexes 1–5 with polypyridyl ligands damaging DNA with the help of light has been carried out. Firstly, the redox potential, electrons-transfer (ET) activation energy, and intra-molecular reorganization energy were computed using DFT (density functional theory), and the results can be used to explain the DNA-photocleavage efficiencies of complexes. Secondly, the effect of ligands on the reduction potentials of complexes in the excited state was elucidated, and the reason of complexes cleaving DNA by the oxidation-reduction reaction and the produced singlet oxygen was explained. Finally, the frontier orbitals of complexes were computed, which was used to qualitatively explain the reason of complexes with high reduction potentials in the excited state.     

Electrochemical properties of 3,5-diphenylaniline units encapsulated within a crown ether. Effects of the macrocycle’s aromatic functionality and ring size

This Letter describes a series of [2]rotaxanes featuring a 3,5-diphenylaniline terminus in their dumbbell-shaped component and crown ethers as the macrocyclic component, prepared through imine formation and hydrogen bond—guided self-assembly. Electrochemical studies of these [2]rotaxanes revealed that the oxidation potential of the aniline moiety when positioned within the cavity of a crown ether was shifted negatively relative to that of the corresponding dumbbell-shaped compound, and that a crown ether possessing a small cavity and a large number of aromatic rings had a more negative effect on the oxidation potential of the aniline moiety than did a large-cavity crown ether featuring no aromatic rings. UV experiments showed that absorption band of the rotaxanes bearing small crowns shifted to longer wavelengths as compared to those of the rotaxanes having large crowns.     

Fluorescent sensor for redox environment: a redox controlled molecular device based on the reversible mercury mediated folded structure formation of oligothymidylate

We report the synthesis of a novel molecular sensor that changes fluorescence emission intensity according to redox environments. The sensor is based on the reversible mercury mediated folded structure formation of oligothymidylates.     

Iron‐mediated AGET ATRP of methyl methacrylate using metal wire as reducing agent

Methyl methacrylate (MMA) were successfully polymerized by atom transfer radical polymerization with activator generated by electron transfer (AGET ATRP) using copper or iron wire as the reducing agent at 90°C. Well‐controlled polymerizations were demonstrated using an oxidatively stable iron(III) chloride hexahydrate (FeCl₃·6H₂O) as the catalyst, ethyl 2‐bromoisobutyrate (EBiB) as the initiator, and tetrabutylammonium bromide (TBABr) or triphenylphosphine as the ligand. The polymerization rate was fast and affected by the amount of catalyst and type of reducing agents. For example, the polymerization rate of bulk AGET ATRP with a molar ratio of [MMA]₀/[EBiB]₀/[FeCl₃·6H₂O]₀/[TBABr]₀ = 500/1/0.5/1 using iron wire (the conversion reaches up to 82.2% after 80 min) as the reducing agent was faster than that using copper wire (the conversion reaches up to 86.1% after 3 h). At the same time, the experimental M_n values of the obtained poly(methyl methacrylate) were consistent with the corresponding theoretical ones, and the M_w/M_n values were narrow (～1.3), showing the typical features of “living”/controlled radical polymerization. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2012     

DNA Responds to Ionizing Radiation as an Insulator,Not as a “Molecular Wire”

The yields of radicals trapped on DNA, measured by EPR spectroscopy of oligodeoxyribonucleotide crystals (the EPR spectrum of a single crystal of d(CCCTAGGG) is shown), are found to be very high (0.7 μmol J⁻¹) and insensitive to long-range (>10⁶ base pairs) versus short-range stacking (8 base pairs) of the bases. These observations are evidence that DNA at 4 K has the properties of an insulator and argue against DNA acting as a “molecular wire”.     

Controllable Intramolecular Motions That Generate Fluorescent Signals for a Metal Scorpionate Complex

Simply by changing the pH value, the side chain of complex 1 can be reversibly moved between two positions. Coordination to the metal center through the nitrogen atom of the side chain at moderate pH values is accompanied by a decrease in fluorescence intensity (from I_F=100% to I_F=60%). A further decrease is observed upon deprotonation of the bound water molecule at higher pH (I_F≤2%). Therefore, 1 can be seen as a molecular three-position switch.     

A Diode-Like Dye-Cu Anisotropic Junction in a Coordination Polymer as a Logic State Ratchet for Intratumor Redox Photomodulation

Redox logic materials offer new avenues to modulate intracellular pathologic redox environment area-specifically, but the unambiguity of redox logic states and their unidirectional and repetitive switchability are challenging to realize. By merging a bistable diisophthalic phenazine dye ligand with Cu^II salt, a multistable coordination polymer (CP) was constructed, of which the dye-Cu anisotropic junction achieved the diode-like unidirectional electron transfer and logic state ratchet for the first time. Radical cationic CP maintained OFF status with low toxicity in healthy tissues, but was reduced to the neutral SERVO state by the overexpressed glutathione (GSH) in hypoxic tumors. After photoirradiation, the stabilized charge-separated ON status promoted photo-Fenton reaction for reactive oxygen species (ROS) signal transduction, and simultaneously recovered the initial state for catalytic signal amplification of ROS, furnishing intratumor redox photomodulation for therapy.     

Synthesis of a novel rigid molecule family for the investigation of electron and energy transfer

Three new rigid bridging ligands for metal complexation (7=bmb, 8=bqb and 11=btb) were prepared from a rigid triptycene spacer connected to two bipyridine ligands using a Horner–Emmons type reaction. The triptycene spacer is substituted by methoxy groups in the case of bmb and in the case of bqb by a benzoquinone substituent. The corresponding metal complexes (ruthenium and/or osmium) were synthesised and the different luminescence behaviour was tested. They show great potential for the investigation of intramolecular electron and energy transfer reactions. The dinuclear metal complex Ru---bqb---Os is an interesting system in which the bridging ligand bqb acts as a redox switch, able to tune the conductivity for energy or electrons across the bridge.     

Development of a Novel Electrochemical Biosensor for Detection and Discrimination of DNA Sequence and Single Base Mutation in dsDNA Samples Based on PNA‐dsDNA Hybridization – a new Platform Technology

In spite of the extensive attention paid on the development of various DNA detection strategies, very few studies have been reported regarding direct detection of DNA sequence and mutation in dsDNA. Here, we describe the feasibility of detection and discrimination of target DNA sequences and single base mutations (SBM) directly in double‐stranded oligonucleotides and PCR products without the need for denaturation of the target dsDNA samples. This goal was achieved by employing a peptide nucleic acid (PNA) chain, self‐assembled on the gold electrode as a probe, which binds to dsDNA and forms PNA‐dsDNA hybrid.     

Photostimulated vectorial electron transfer across the bilayer membrane of lipid vesicles in a system with CdS nanoparticles as photosensitizer and 1,4--bis(1,2,6-triphenyl-4-pyridyl)benzene as a reversible two-electron carrier

Photostimulated vectorial electron transfer through the lecithin bilayer membrane was studied in a system based on lipid vesicles with CdS as a photosensitizer located either in the vesicle inner cavity or outside the vesicles. 1,4-Bis(1,2,6-triphenyl-4-pyridyl)benzene (benzoviologen) was used as an effective lipophilic highly reversible electron carrier incorporated into the bilayer membrane. A peculiarity of this electron carrier is its ability to be reversibly reduced on one and two electrons. The interface electron transfer across the border “vesicular cavity-membrane” was studied by stationary and pulse photolysis. The primary photoreduced form of benzoviologen appears to be that reduced by one electron; however, on stationary photolysis, most benzoviologen molecules appear to be affected by two-electron reduction, which can result from the low mutual mobility of CdS nanoparticles and benzoviologen molecules. The CdS photostimulated transmembrane electron transfer from the internal sacrificial donor to the external acceptor (as regards the vesicular cavity) was performed for [CoEDTA]⁻ as the final electron acceptor. The rate constants of electron transfer from the membrane-embedded two-electron reduced form of benzoviologen have been determined in the case of [CoEDTA]⁻ and O₂ as acceptors.     

An informative subtlety of itemperature-jump or coulostatic responses for surface-attached species

Theoretical relationships are developed to describe the open-circuit responses associated with the indirect laser-induced temperature-jump (ILIT) method, a method for measuring fast electron-transfer rate constants of surface-attached redox species. The analysis is also applicable to data obtained using the coulostatic charge-injection method. The unique relationship between k_m, the relaxation rate constant for the ILIT (or coulostatic) response, and E_i, the potential at which the system is initially poised, exhibits a surprising sensitivity to the values of k₀, E_i^0′ (the standard rate constant and formal potential for the redox couple), α (the transfer coefficient in the Butler–Volmer equation) and γ (a dimensionless parameter which is directly proportional to the total surface concentration of the redox moiety). ILIT data for several examples of surface-attached ferrocene moieties confirm the theoretically predicted k_m vs E_i behavior. Values of E_i^0′ and γ extracted from the ILIT data agree well with the values obtained from cyclic voltammetric data thereby confirming that the ILIT and cyclic voltammogram (CV) experiments are sampling the same ferrocene population.     

Laser-induced modification of DNA and Poly[A,G] at guanine moiety using acetone as photosensitizer

The interactions of triplet acetone with polyadenylic acid (Poly[A]), polyguanylic acid (Poly[G]), polyadenylic-guanylic acid (Poly[A,G]) and single-stranded DNA (ssDNA) were investigated in neutral aqueous solution using KrF (248 nm) laser flash photolysis. The transient absorption spectra and kinetics of DNA and polynucleotides obtained under acetone sensitization demonstrated that the predominant transient species was guanine radical. These novel findings have offered time-resolved evidence for photochemical modification of DNA and Poly[A,G] at guanine moiety.     

还原氧化石墨烯包覆MOF衍生In2Se3用于钠离子电池负极(英文)

MOF衍生金属硒化物由于其有序的碳骨架结构和高导电性,被认为是钠离子电池极具前景的负极材料。它们具有快速的电子/离子输运通道,有利于钠离子的嵌入和脱出。然而,循环过程中的大量体积膨胀会导致结构坍塌。为了解决这个问题,通过表面改性在MOF衍生金属硒化物表面引入了一个二维的还原氧化石墨烯网络,既可以缓解体积变化,又能加速电子转移。实验证实这种策略是有效的,在1 A·g^-1下500次循环后,包覆了还原氧化石墨烯的复合材料电极容量保持率提高到了95.2%。相比之下,不含还原氧化石墨烯的容量保留率仅为74.2%。此外,由于还原氧化石墨烯网络和MOF衍生In₂Se₃协同作用,在0.1 A·g^-1下显示出了468 m Ah·g^-1的优越容量。而在相同的电流密度下,未包覆还原氧化石墨烯的只产生393 m Ah·g^-1的比容量。采用循环伏安法(CV)研究了In₂Se₃@C/rGO电极的电化学过程,结果表明其具有良好的电化学反应活性...     

Evaluation of the Oxo‐bridged Dinuclear Ruthenium Ammine Complex as Redox Mediator in an Electrochemical Biosensor

The mediation of electron‐transfer by oxo‐bridged dinuclear ruthenium ammine [(bpy)₂(NH₃)Ru^III(µ‐O)Ru^III(NH₃)(bpy)₂]⁴⁺ for the oxidation of glucose was investigated by cyclic voltammetry. These ruthenium (III) complexes exhibit appropriate redox potentials of 0.131–0.09 V vs. SCE to act as electron‐transfer mediators. The plot of anodic current vs. the glucose concentration was linear in the concentration range between 2.52×10^?5 and 1.00×10^?4 mol L^?1. Moreover, the apparent Michaelis‐Menten kinetic (K_M^app) and the catalytic (K_cat) constants were 8.757×10^?6 mol L^?1 and 1,956 s^?1, respectively, demonstrating the efficiency of the ruthenium dinuclear oxo‐complex [(bpy)₂(NH₃)Ru^III(µ‐O)Ru^III(NH₃)(bpy)₂]⁴⁺ as mediator of redox electron‐transfer.     

原子转移自由基聚合修饰银丝固定化酶反应器的制备及在蛋白质组鉴定中的应用

针对传统溶液酶解存在的酶解时间较长、酶自切物干扰以及蛋白酶不能重复使用等缺陷,通过电子转移生成催化剂的原子转移自由基聚合法修饰银丝,并以其为载体制备了一种新型的固定化酶反应器。用质谱考察了银丝固定化酶反应器(SW-Trypsin)的酶解效率、重复性和回收率。结果表明:绒毛状聚合物修饰的SW-Trypsin的酶解效率较高,酶解标准蛋白牛血清白蛋白(BSA)20 min后,肽段的氨基酸序列覆盖率可达93%,高于传统溶液酶解方法酶解16 h所得79%的覆盖率。使用该固定化酶反应器于一个月内8次酶解BSA所得的氨基酸序列覆盖率在89%到97%之间,平均覆盖率为94%,显示出良好的稳定性。另外,该固定化酶反应器酶解马心肌红蛋白(MYO)的回收率为87.67%。最后,用SW-Trypsin酶解腾冲嗜热菌全蛋白20 min,所鉴定到的氨基酸序列覆盖率和蛋白数量与同样条件下溶液酶解16 h的结果接近,且零漏切位点肽段的比例更高。加之容易分离的优点,SW-Trypsin在蛋白质组学的应用中具有良好的前景。     

Computer simulation of electron transfer processes across the electrode|electrolyte interface: a treatment of solvent and electrode polarizability

A polarizable molecular dynamics model for adiabatic electron transfer across the electrode|electrolyte interface is presented. The electronic polarizability of the water and of the metal electrode is accounted for by a dynamical fluctuating charge algorithm, image charges, and the Ewald summation adapted for a conducting interface. The effects of the solvent electronic polarizability are studied by computing the diabatic and adiabatic free energy curves for both polarizable and non-polarizable water models. This represents the first effort to compute the adiabatic free energy curves from simulation for a fully polarizable electrochemical system.