Crystal engineering: Supramolecular structures by cocrystallization ofMeso-1,2-diphenyl-1,2-ethanediol and bisimines,simple cases of molecular recognition

The crystal structures of molecular complexes betweenmeso- 1,2-diphenyl-1,2-ethanediol and two bisimines (N,N-(dibenzylidene)-ethylenediamine and glyoxylidene-bis(2,4-dimethyl-3-pentyl-amine) are reported at different temperatures. The structure-determining motif of the cocrystalline arrangement is one single O-H . N hydrogen bond resulting in infinite ladderlike polymers. The supramolecular structure is formed by recognition of fitting species: Thed- orl-isomers do not arrange in such structures.¹H NMR experiments show that no prearrangements take place by forming complexes in solution.     

A Tricyclic Polyamide Receptor for Carbohydrates in Organic Media

The dissolution of glucose in chloroform is promoted by the receptor 1. Two biphenyl units and eight amide linkages line the cavity of 1 , which was designed for complementarity to β-glucopyranosyl. Receptor 1 binds octyl glycosides with unusual affinities and stereoselectivities, even with methanol present as cosolvent.     

Exploring Orthogonal Hydrogen Bonding towards Designing Organic‐Salt‐Based Supramolecular Gelators: Synthesis,Structures, and Anticancer Properties

A series of primary ammonium monocarboxylate (PAM) salts derived from β‐alanine derivatives of pyrene and naphthalene acetic acid, along with the parent acids, were explored to probe the plausible role of orthogonal hydrogen bonding resulting from amide???amide and PAM synthons on gelation. Single‐crystal X‐ray diffraction (SXRD) studies were performed on two parent acids and five PAM salts in the series. The data revealed that orthogonal hydrogen bonding played an important role in gelation. Structure–property correlation based on SXRD and powder X‐ray diffraction data also supported the working hypothesis upon which these gelators were designed. 3‐(4,5‐Dimethylthiazol‐2‐yl)‐2,5‐diphenyltetrazolium bromide (MTT) and cell migration assay on a highly aggressive human breast cancer cell line, MDA‐MB‐231, revealed that one of the PAM salts in the series, namely, PAA.B2 , displayed anticancer properties, and internalization of the gelator salt in the same cell line was confirmed by cell imaging.     

A Structural Study of Tautomerism and Hydrogen-Bonding in Supramolecular Assemblies

The synthesis and X-ray structures of four new crystalline materials incorporating ’dimers’ assembled from two different units possessing complementary hydrogen bonding motifs are reported; namely, phthalimide and 3-iminoisoindolinone or 2-guanidinobenzimidazole (or selected methylated derivatives) and 2-guanidinobenzoxazole. The bonding within each dimer involves a triplet of hydrogen bonds. The extended supramolecular structures are compared with each other as well as with two related structures described previously. The effect of using complementary DAD/ADA motifs that are not symmetrical on the respective supramolecular structures is also examined as is the prospect of incorporating different tautomeric components into the supramolecular structures. The presence of a very short, proton-transferred hydrogen bond within the respective triplets is also discussed.     

A Robust Nanoporous Supramolecular Metal–Organic Framework Based on Ionic Hydrogen Bonds

Hydrogen‐bond assembly of tripod‐like organic cations [H₃‐MeTrip]³⁺ (1,2,3‐tri(4′‐pyridinium‐oxyl)‐2‐methylpropane) and the hexa‐anionic complex [Zr₂(oxalate)₇]^6? leads to a structurally, thermally, and chemically robust porous 3D supramolecular framework showing channels of 1 nm in width. Permanent porosity has been ascertained by analyzing the material at the single‐crystal level during a sorption cycle. The framework crystal structure was found to remain the same for the native compound, its activated phase, and after guest resorption. The channels exhibit affinities for polar organic molecules ranging from simple alcohols to aniline. Halogenated molecules and I₂ are also taken up from hexane solutions by this unique supramolecular framework.     

Long,Multicenter Bonding—A New Concept for Supramolecular Materials

A new concept for constructing supramolecular architectures is discussed. In addition to van der Waals and hydrogen‐bonding intermolecular interactions that primarily account for supramolecular structures for all materials lacking extended 3D network structures, directional, long, multicenter bonding that can occur for anionic, cationic, neutral, and zwitterionic radicals and can direct intermolecular recognition through π interactions and form extended network supramolecular structural motifs.     

Supramolecular Self-Sorting Networks using Hydrogen-Bonding Motifs

A current objective in supramolecular chemistry is to mimic the transitions between complex self-sorted systems that represent a hallmark of regulatory function in nature. In this work, a self-sorting network, comprising linear hydrogen motifs, was created. Selecting six hydrogen-bonding motifs capable of both high-fidelity and promiscuous molecular recognition gave rise to a complex self-sorting system, which included motifs capable of both narcissistic and social self-sorting. Examination of the interactions between individual components, experimentally and computationally, provided a rationale for the product distribution during each phase of a cascade. This reasoning holds through up to five sequential additions of six building blocks, resulting in the construction of a biomimetic network in which the presence or absence of different components provides multiple unique pathways to distinct self-sorted configurations.     

Iodinated ortho‐Carboranes as Versatile Building Blocks to Design Intermolecular Interactions in Crystal Lattices

The crystal structures of numerous iodinated ortho‐carboranes have been studied, which has revealed the diversity of intermolecular interactions that these substances can adopt in the solid state. The nature—mostly as it relates to hydrogen and/or halogen bonds—and relative strength of such interactions can be adjusted by selectively introducing substituents onto the cluster, thus enabling the rational design of crystal lattices. In this work we present the newly determined crystal structures of the following iodinated ortho‐carboranes: 9‐I‐1,2‐closo‐C₂B₁₀H₁₁, 4,5,7,8,9,10,11,12‐I₈‐1,2‐closo‐C₂B₁₀H₄, 3,4,5,6,7,8,9,10,11,12‐I₁₀‐1,2‐closo‐C₂B₁₀H₂, 1‐Me‐8,9,10,12‐I₄‐1,2‐closo‐C₂B₁₀H₇, 1,2‐Me₂‐8,9,10,12‐I₄‐1,2‐closo‐C₂B₁₀H₆, and 1,2‐Ph₂‐8,9,10,12‐I₄‐1,2‐closo‐C₂B₁₀H₆. Their 3D supramolecular organization has been thoroughly investigated and compared to similar previously published crystal structures. Such a systematic survey has allowed us to draw some general trends. C_c? H???I? B hydrogen bonds (C_c= cluster carbon atoms) appear to be significant in the growth of the crystal lattices of these compounds, given the acidity of hydrogen atoms bonded to C_c, and the polarization of B? I bonds. These hydrogen bonds can be disrupted by selectively blocking the positions next to C_c, that is, B(3) and B(6), with bulky substituents that prevent iodine atoms from approaching as hydrogen acceptors. Halogen bonds of the type B? I???I? B are frequently observed in most cases, thus suggesting that these interactions could be attractive in boron clusters. In addition, different substituents can be grafted onto the ortho‐carborane surface, thereby providing further possibilities for homomeric or heteromeric molecular assembly.     

A New Base-Pairing Motif Based on Modified Guanosines

Stable even in dimethyl sulfoxide , dimer I does not dissociate to monomers 1 in organic media. The unique base-pairing interaction involving four hydrogen bonds in the readily available compound 1 was characterized by NMR spectroscopy.     

Crystal Engineering with Multipoint Halogen Bonding: Double Two-Point Donors and Acceptors at Work

The combination of singly or doubly bidentate halogen-bond donors with double bidentate acceptors was investigated as a supramolecular synthon in crystal engineering. The crystal topologies obtained feature novel halogen-bonding motifs like double two-point recognition and infinite chains or networks based on two-point interactions. Induced conformational changes in the double bidentate halogen-bond donors could be exploited to obtain different 1D and 2D networks. All solid-state studies were accompanied by DFT calculations to predict and rationalize the outcome.     

A competitive molecular recognition study: syntheses and analysis of supramolecular assemblies of 3,5-dihydroxybenzoic acid and its bromo derivative with some N-donor compounds

A molecular recognition study of 3,5-dihydroxybenzoic acid (1) and its bromo derivative 4-bromo-3,5-dihydroxybenzoic acid (2) with the N-donor compounds 1,2-bis(4-pyridyl)ethene (bpyee), 1,2-bis(4-pyridyl)ethane (bpyea), and 4,4'-bipyridine (bpy) is reported. Thus, the syntheses and structural analysis of molecular adducts 1 a-1 c (1 with bpyee, bpyea, and bpy, respectively) and 2 a-2 c (2 with bpyee, bpyea, and bpy, respectively) are discussed. In all these adducts, recognition between the constituents is established through either O--H...N and/or O--H...N/C--H...O pairwise hydrogen bonds. In all the adducts both OH and COOH functional groups available on 1 and 2 interact with the N-donor compounds, except in 2 a, in which only COOH (COO-) is involved in the recognition process. The COOH moieties in 1 a, 1 b, and 2 b form only single O--H...N hydrogen bonds, whereas in 1 c and 2 c, they form pairwise O--H...N/C--H...O hydrogen bonds. In addition, subtle differences in the recognition patterns resulted in the formation of cyclic networks of different dimensions. In fact, only 1 c forms a four-molecule cyclic moiety, as was already documented in the literature for this kind of assemblies. All complexes have been characterized by single-crystal X-ray diffraction. The supramolecular architectures are quite elegant and simple, with stacking of sheets in all adducts, but a rather complex network with a threefold interpenetration pattern was found in 2 c.     

氢键识别超分子聚合物的新进展

近年来,由于氢键作用对聚合物的热力学性质、微观自组装、结晶及液晶行为的重要影响,氢键识别在超分子聚合物的分子设计与结构控制方面的应用受到广泛关注。本文系统介绍了氢键识别体系的类型与性质,以及分子结构、分子内氢键对氢键识别强度的影响,讨论了羧酸与吡啶间氢键识别体系、与核苷相关的氢键识别体系以及四重氢键识别体系在超分子聚合物中的最新应用,主要介绍了氢键识别超分子聚合物的合成、结构、性质及功能。     

Crystal Engineering Approach To Design Colorimetric Indicator Array To Discriminate Positional Isomers of Aromatic Organic Molecules

Discriminating by color : A 2D colorimetric indicator array has been designed by a crystal engineering approach (N???H? O hydrogen bonding and charge‐transfer complexation) involving solid‐state co‐grinding for the visual discrimination of positional isomers of dihydroxynaphthalene. Factors governing the close packing of π planes, and hence color of the complex, were determined by single‐crystal X‐ray analysis, allowing fine tuning by crystal engineering.

     

Crystal engineering: a holistic view

Crystal engineering, the design of molecular solids, is the synthesis of functional solid-state structures from neutral or ionic building blocks, using intermolecular interactions in the design strategy. Hydrogen bonds, coordination bonds, and other less directed interactions define substructural patterns, referred to in the literature as supramolecular synthons and secondary building units. Crystal engineering has considerable overlap with supramolecular chemistry, X-ray crystallography, materials science, and solid-state chemistry and yet it is a distinct discipline in itself. The subject goes beyond the traditional divisions of organic, inorganic, and physical chemistry, and this makes for a very eclectic blend of ideas and techniques. The purpose of this Review is to highlight some current challenges in this rapidly evolving subject. Among the topics discussed are the nature of intermolecular interactions and their role in crystal design, the sometimes diverging perceptions of the geometrical and chemical models for a molecular crystal, the relationship of these models to polymorphism, knowledge-based computational prediction of crystal structures, and efforts at mapping the pathway of the crystallization reaction.