Asymmetric deformation density analysis in carbon nanotubes

Electrons and holes as charge carriers appear when a molecular system is exposed to external electric field. For nonsymmetric molecules, the distribution of charge carriers is also nonsymmetric. Although symmetric distribution of charge carriers is expected when the molecular system is symmetric, as the present work shows, they are not symmetric unexpectedly; that is, electrons and holes are not each other's mirror images. In this respect, asymmetric deformation density analysis is introduced to measure the extent of asymmetric distribution of electrons and holes as charge carriers when the symmetric system is exposed to symmetric external potential. Segments of (5,0) carbon nanotubes with different lengths are selected as symmetric systems, and a linear electric field is applied along the principal axis as symmetric potential. Results show that, at high electric fields, electrons tend to localize at the ends, while holes tend to occupy the middle area of carbon nanotube segments. While charge carriers play a vital role in molecular conductivity, asymmetric distribution of electrons and holes in symmetric systems has not yet been reported.     

New insights on the origins of the stereocontrol of the staudinger reaction: [2 + 2] cycloaddition between ketenes and N-silylimines

Density-functional theory studies on the [2 + 2] reaction between N-silylimines and ketenes to form the corresponding 2-azetidinones (beta-lactams) help to clarify several aspects on the mechanism of the Staudinger reaction. This reaction has been studied experimentally by Panunzio et al. It is shown that the formation of the 2-azetidinone ring takes place via two consecutive reactions. The first reaction consists of the nucleophilic addition of the iminic nitrogen to the sp-hybridized carbon atom of the ketene, with simultaneous migration of the silyl group from the imine to the oxygen atom of the ketene. This leads to silyl enol intermediates, in good agreement with the experimental results. Formation of the N-silylated beta-lactam takes place via a domino reaction consisting of a conrotatory thermal electrocyclization followed by a new silatropic rearrangement. It is also found that isomerization of the starting N-silylimine has a lower activation barrier than that associated with the formation of the C-N bond, which explains the stereochemical outcome experimentally observed. Further considerations on the asymmetric torquoelectronic effects involved in this reaction are also reported.     

An unexpected access to 5-epi-cyclophellitol: a new cyclitol member

A thorough reinvestigation of the hydroboration–oxidation of methylene epoxycyclohexane 3 has revealed the formation of a direct precursor of the hitherto unreported 5-epi-cyclophellitol. Hydroboration of the starting precursor 3 takes place with total and opposite stereocontrol to that previously described in the literature. The stereochemistry of this new cyclophellitol isomer has been unambiguously confirmed by comparison with reference compounds obtained by independent methods.     

The Curtius rearrangement of some organic azides: A DFT mechanistic study

The reaction mechanism for the thermal Curtius reaction of formyl azide has been investigated using B3LYP/6‐311+G(d,p). It is found that, while the synisomer undergoes nitrogen elimination via a concerted mechanism, yielding isocyanic acid directly, the anti‐isomer cannot undergo reaction via the concerted mechanism and first eliminates nitrogen, yielding oxazirene, via a transition state which is higher in energy than that for the concerted mechanism. Singlet formyl nitrene does not exist as an independent moiety. Rather, the strong N? O interaction yields the cyclic isomer oxazirene. The isomerization of oxazirene to isocyanic acid goes through a transition state which is even higher in energy than that for nitrogen elimination. It is hence proposed that this reaction should take place via the concerted mechanism only, the anti‐isomer undergoing isomerization first to the syn isomer since the activation barrier for this step is very small. The same mechanism is found to prevail for acetyl and benzoyl azide. These findings are in accord with all experimental data. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2009     

A Facile Synthesis of the C-11 isomer of 5-epi-Kudtriol

Eudesmane derivatives contain a number of naturally occurring compounds. Amongthem many compounds possess intriguing biological properties"'.Kudtriol 1 and 5-epi-kudtriol 2 was first isolated from the aerial parts of Jasaniaglatinosa by Tereasa et al ', and their structures were determined as (-)-eudesm-4(14)-ensa,l 1,12-triol and ( )-eudesm-4(14)-en-50,l l,12-triol respectively by spectroscopicmethods.Although previous paper reported the synthesis of 2 from Q-santonin 4 in elevensteps#, an e…     

The adsorption and self-assembly of mixtures of alkylbenzene sulfonate isomers and the role of divalent electrolyte

In this paper, the role of the different structural isomers of the anionic surfactant sodium para-dodecyl benzene sulfonate, LAS, on surface adsorption and solution self-assembly has been studied. Using a combination of neutron reflectivity, NR, and small angle neutron scattering, SANS, the effect of mixing an isomer with a short symmetric hydrocarbon chain with one which has an asymmetric hydrocarbon chain on both the equilibrium surface adsorption behavior and the solution microstructure of the mixtures, both in the presence and absence of a divalent cation (Ca(2+)), has been investigated. In the absence of electrolyte, the LAS isomer mixtures form small charged globular micelles throughout the composition range studied. The micelle aggregation number increases with the increase in the asymmetric isomer content, reflecting an increase in the packing efficiency within the micelle. The addition of calcium ions promotes the formation of planar aggregates, as multilamellar vesicles, but only when the symmetric LAS isomer is the major component of the mixture. At a surfactant concentration just above the critical micelle concentration, CMC, and in the absence of electrolyte, the variation in the surface composition is close to the solution composition. Regular solution theory, RST, calculations show that this variation is also close to what is expected for ideal mixing. The addition of Ca(2+) ions induces a different surface behavior, resulting in the formation of multilayer structures at the interface throughout the entire composition range.     

Studying light propagation in self-assembled hybrid photonic-plasmonic crystals by fourier microscopy

Hybrid metallodielectric systems where dielectric components are combined with metals supporting surface plasmons are able to spatially redistribute the electromagnetic field intensity within its volume through hybrid photonic-plasmonic modes. While most of the work done recently in this kind of systems has been focused on the way such redistribution takes place and how light couples to or is emitted from such samples, the way light propagation takes place has not been studied in depth. Here we consider light propagation in hybrid systems fabricated by self-assembly methods measuring their equifrequency surfaces both in reflection and emission configurations. Comparing spectroscopic measurements with equifrequency surfaces provides a deeper insight into the way light propagates in these structures, showing the possibilities they may present for several applications.     

From a Sequential to a Concurrent Reaction in Aqueous Medium: Ruthenium‐Catalyzed Allylic Alcohol Isomerization and Asymmetric Bioreduction

The ruthenium‐catalyzed redox isomerization of allylic alcohols was successfully coupled with the enantioselective enzymatic ketone reduction (mediated by KREDs) in a concurrent process in aqueous medium. The overall transformation, formally the asymmetric reduction of allylic alcohols, took place with excellent conversions and enantioselectivities, under mild reaction conditions, employing commercially and readily available catalytic systems, and without external coenzymes or cofactors. Optimization resulted in a multistep approach and a genuine cascade reaction where the metal catalyst and biocatalyst coexist from the beginning.     

Regio- and Enantioselective Substitution of Acyclic Allylic Sulfoximines with Butylcopper in the Presence of Lithium Iodide and Boron Trifluoride

Enantiomerically pure N-methyl-, N-benzyl-, and N-(methoxyethyl)-S-(phenyl)cinnamylsulfoximines as well as the corresponding crotylsulfoximines have been prepared from N-methyl-, N-benzyl-, and N-(methoxyethyl)-S-(lithiomethyl)sulfoximines and carbonyl compounds by an addition-elimination-isomerization reaction sequence. Under basic conditions, complete isomerization of the vinylic sulfoximines, obtained as intermediates, to the corresponding allylic sulfoximines takes place. Chromatographically separable mixtures of (E) and (Z) allylic sulfoximines were isolated in the case of beta,gamma-disubstituted allylic sulfoximines. The (E/Z) ratio depends on the nature of the substituents in the beta- and gamma-positions, and the equilibrium amount of the (Z) isomer varies from 68% to nil. The allylic N-methylsulfoximines do not racemize thermally, and their rearrangement to the corresponding allylic sulfinamides is negligible. Upon prolonged treatment with boron trifluoride at low temperatures allylic N-methylsulfoximines are recovered unchanged. The crystal structure of S-(3,4-dihydronaphthalen-2-ylmethyl)-N-methyl-S-phenylsulfoximine was determined. Reaction of the allylic sulfoximines with butylcopper in the presence of lithium iodide and boron trifluoride leads with very high gamma-selectivities and moderate to high enantioselectivities to the corresponding chiral alkenes. Their configuration was determined by chemical correlation through ozonolysis to the corresponding carbonyl compounds. The asymmetric induction exerted by the chiral N-methyl-S-phenylsulfoximine group strongly depends on the double bond configuration and the substituents in the beta- and gamma-positions. The (E) allylic sulfoximines are substituted with low to moderate enantioselectivities (2-66%), whereas the (Z) allylic sulfoximines react with much higher enantioselectivities (69-92%). Interestingly, substitution of the beta-methyl-gamma-phenyl-substituted (Z) allylic sulfoximine and its beta-phenyl-gamma-methyl isomer proceeded with almost the same degree of asymmetric induction but with the opposite sense. Replacement of the N-methyl group by a benzyl or a methoxyethyl group has no significant influence on the regio- and enantioselectivity of the substitution.     

Conformational isomerization of formic acid by vibrational excitation at energies below the torsional barrier

Photoinduced conformational isomerization of formic acid has been studied in a low-temperature argon matrix. It is found that conformational isomerization occurs when the photon energy is below the energy barrier for this process. The quantum yield for the process near the top of the barrier is comparable with the quantum yield above the barrier and drops at lower energies. The isomerization takes place via a tunneling mechanism.     

External-energy-independent polymer capsule motors and their cooperative behaviors

The design and development of mobile nano-, micro-, and millimeter-scale autonomous systems have been perused over several decades. Here, we introduce a millimeter-sized polymer capsule motor with specific features and functionalities. It runs without any external energy sources or the consumption of external fuels such as H(2)O(2) or glucose. The occurrence of motion is due to the asymmetric release of organic solvent from the capsule and the asymmetric change in the surface tension of the surrounding liquid. The capsule moves from a place of lower surface tension to a place of higher surface tension (Marangoni effect) in an attempt by the system to attain the desirable lowest-free-energy state. The operation of the motor is versatile in terms of the environment, as it moves on a wide variety of liquid/air interfaces, including water, sea water, organic solvent/water mixtures, and acids. A high-motion velocity was observed, with a travelling distance of over 20 meters. The manipulation of its motion was achieved upon functionalization with nickel powder and application of an external magnetic field. Long-range interaction behaviors and surface-cleaning effects due to the chemotaxis effect were also demonstrated when the capsule was functionalized with sodium dodecyl sulfate (SDS). We believe that a plethora of applications can be envisioned with this motor, such as cargo delivery, manipulation of matter, sensing and detection, biorecognition, and environmental remediation.     

Photoisomerization of a Maleonitrile‐Type Salen Schiff Base and Its Application in Fine‐Tuning Infinite Coordination Polymers

Strategically designed salen ligand 2,3‐bis[4‐(di‐p‐tolylamino)‐2‐hydroxybenzylideneamino]maleonitrile ( 1 ), which has pronounced excited‐state charge‐transfer properties, shows a previously unrecognized form of photoisomerization. On electronic excitation (denoted by an asterisk), 1Z *→ 1E isomerization takes place by rotation about the C2? C3 bond, which takes on single‐bond character due to the charge‐transfer reaction. The isomerization takes place nonadiabatically from the excited‐state ( 1Z ) to the ground‐state ( 1E ) potential‐energy surface in the singlet manifold; 1Z and 1E are neither thermally inconvertible at ambient temperature (25–30 °C), nor does photoinduced reverse 1E *→ 1Z (or 1Z *) isomerization occur. Isomers 1Z and 1E show very different coordination chemistry towards a Zn^II precursor. More prominent coordination chemistry is evidenced by a derivative of 1 bearing a carboxyl group, namely, N,N′‐dicyanoethenebis(salicylideneimine)dicarboxylic acid ( 2 ). Applying 2Z and its photoinduced isomer 2E as building blocks, we then demonstrate remarkable differences in morphology (sphere‐ and needlelike nanostructure, respectively) of their infinite coordination polymers with Zn^II.     

Thermal- and UV-induced cis/trans isomerization of undoped polyacetylene films. An ESR and IR investigation

The UV- and thermal-induced cis→trans isomerization of undoped polyacetylene (PA) films has been investigated. The results have shown that temperature and UV light promote the isomerization of PA with a similar mechanism. We suggest that the formation of paramagnetic defects in trans PA takes place by bond rehybridization, in agreement with previous hypotheses, and that both spin concentration and spin delocalization depend on the temperature of isomerization. It was found that under UV irradiation thermal cis→trans isomerization of polyacetylene also takes place at temperatures at which the sole thermal treatment isomerization is much lower or nil, and we suggest that the possibility of preparing trans PA under relatively mild conditions may lead to a better material.     

Photoisomerization of alfa calcidol by a sensitized quantum chain reaction

The production of vitamin D3 is a pharmaceutically relevant process, producing high added-value products. Precursors are extracts from vegetal origin but bearing mainly an E geometry in the 5,6 double bond. The synthesis of vitamin D3 (5-E-α-calcidol) with the correct Z stereochemistry in the 5,6 double bond from the E isomer using anthracene and triethylamine (TEA) as the sensitizer system was studied from the kinetic and mechanistic point of view. The sensitized isomerization of E-calcidol by irradiation of anthracene takes place only in deoxygenated solution and yields the Z isomer in ca 5% yield in the photostationary state. When TEA is added to the system, the E-Z reaction is not inhibited by oxygen any more, the quantum yield of photoisomerization to the Z isomer grows linearly with the concentration of E-calcidol, while conversions higher than 95% to the Z isomer are reached in the photostationary state and E-Z quantum yields as high as 45 at [E-calcidol] = 25 mM are reached. If TEA is replaced by 1,4-diazabicyclo[2.2.2]octane, the reaction rate drops to one-third at the same amine concentration. The observations can be explained by a quantum chain reaction mechanism. The high conversion achieved eliminates the need of isomer separation.     

A fast photoswitch for minimally perturbed peptides: investigation of the trans-->cis photoisomerization of N-methylthioacetamide

Thio amino acids can be integrated into the backbone of peptides without significantly perturbing their structure. In this contribution we use ultrafast infrared and visible spectroscopy as well as state-of-the-art ab initio computations to investigate the photoisomerization of the trans form of N-methylthioacetamide (NMTAA) as a model conformational photoswitch. Following the S2 excitation of trans-NMTAA in water, the return of the molecule into the trans ground state and the formation of the cis isomer is observed on a dual time scale, with a fast component of 8-9 ps and a slow time constant of approximately 250 ps. On both time scales the probability of isomerization to the cis form is found to be 30-40%, independently of excitation wavelength. Ab initio CASPT2//CASSCF photochemical reaction path calculations indicate that, in vacuo, the trans-->cis isomerization event takes place on the S1 and/or T1 triplet potential energy surfaces and is controlled by very small energy barriers, in agreement with the experimentally observed picosecond time scale. Furthermore, the calculations identify one S2/S1 and four nearly isoenergetic S1/S0 conical intersection decay channels. In line with the observed isomerization probability, only one of the S1/S0 conical intersections yields the cis conformation upon S1-->S0 decay. A substantially equivalent excited-state relaxation results from four T1/S0 intersystem crossing points.     

Highly enantioselective Cu(I)-Tol-BINAP-catalyzed asymmetric conjugate addition of Grignard reagents to α,β-unsaturated esters

The copper-catalyzed conjugate addition (CA) of organometallic reagents to α,β-unsaturated carbonyl compounds is one of the most versatile synthetic methods for the construction of C-C bonds. Interestingly, the application of Grignard reagents, which are among the most widely used of organometallic compounds, in asymmetric conjugate addition (CA) reactions has received less attention. Therefore, our group and others have been exploring better catalytic systems to effect the asymmetric 1,4-conjugate addition of Grignard reagents to α,β-unsaturated esters. It is only in the past decade that significant breakthroughs have been made in this field. In our studies, we found that CuI-Tol-BINAP could catalyze the asymmetric conjugate addition (CA) reactions of Grignard reagents, including the addition of MeMgBr to α,β-unsaturated esters to afford the β-methylated esters in good yields with excellent regio- and enantioselectivities. Both enantiomers of the products could be obtained by either using the enantiomers of the chiral Tol-BINAP or by using the geometrical isomer of the starting material. This method is also suitable for other Michael acceptors. In this article, we describe the development of the asymmetric Cu(I)-Tol-BINAP catalyzed 1,4-conjugate addition of Grignard reagents to α,β-unsaturated esters and applications of this chemistry. This method provides a convenient method to synthesize β-alkyl esters with high enantioselectivity or diastereoselectivity using CuI and the inexpensive chiral ligand, Tol-BINAP.     

Highly efficient redox isomerization of allylic alcohols at ambient temperature catalyzed by novel ruthenium-cyclopentadienyl complexes--new insight into the mechanism

A range of ruthenium cyclopentadienyl (Cp) complexes have been prepared and used for isomerization of allylic alcohols to the corresponding saturated carbonyl compounds. Complexes bearing CO ligands show higher activity than those with PPh3 ligands. The isomerization rate is highly affected by the substituents on the Cp ring. Tetra(phenyl)methyl-substituted catalysts rapidly isomerize allylic alcohols under very mild reaction conditions (ambient temperature) with short reaction times. Substituted allylic alcohols have been isomerized by employing Ru-Cp complexes. A study of the isomerization catalyzed by [Ru(Ph5Cp)(CO)2H] (14) indicates that the isomerization catalyzed by ruthenium hydrides partly follows a different mechanism than that of ruthenium halides activated by KOtBu. Furthermore, the lack of ketone exchange when the isomerization was performed in the presence of an unsaturated ketone (1 equiv), different from that obtained by dehydrogenation of the starting allylic alcohol, supports a mechanism in which the isomerization takes place within the coordination sphere of the ruthenium catalyst.     

A perspective on nonresonant and resonant electronic response theory for time-dependent molecular properties

The development of electronic response theory in quantum chemistry has been reviewed, starting from the early 1970's and reaching the current state-of-the-art. The general theory has been applied to the calculation of a large number of spectroscopic parameters over the years, and it has been implemented for the majority of standard electronic structure methods. Two formulations of response theory, the Ehrenfest expectation value and the quasi-energy derivative formulation, have turned into leading alternatives for the derivation of computationally tractable expressions of response functions, and they are here reviewed with an attempt to, as far as possible, leave out technical details. A set of four steps are identified as common in derivations of response functions, and the two formulations are compared along this series of steps. Particular emphasis is given to the situation when the oscillation of the weak external electromagnetic field is in resonance with a transition frequency of the system. The formation of physically sound response functions in resonance regions of the spectrum is discussed in light of the causality condition and the Kramers-Kronig relations, and it is achieved in wave function theory by means of the introduction of relaxation parameters in a manner that mimics what one sees in density matrix theory. As a working example, equations are illustrated by their application to a two-state model for para-nitroaniline including the ground and the lowest charge-transfer state in the electric dipole approximation.