Thermochemistry and kinetics of the 2-butanone-4-yl CH3C(=O)CH2CH2• + O2 reaction system

Thermochemistry and kinetic pathways on the 2-butanone-4-yl (CH₃C(=O)CH₂CH₂•) + O₂ reaction system are determined. Standard enthalpies, entropies, and heat capacities are evaluated using the G3MP2B3, G3, G3MP3, CBS-QB3 ab initio methods, and the B3LYP/6-311g(d,p) density functional calculation method. The CH₃C(=O)CH₂CH₂• radical + O₂ association reaction forms a chemically activated peroxy radical with 35 kcal mol⁻¹ excess of energy. The chemically activated adduct can undergo RO−O bond dissociation, rearrangement via intramolecular hydrogen transfer reactions to form hydroperoxide-alkyl radicals, or eliminate HO₂ and OH. The hydroperoxide-alkyl radical intermediates can undergo further reactions forming ketones, cyclic ethers, OH radicals, ketene, formaldehyde, or oxiranes. A relatively new path showing a low barrier and resulting in reactive product sets involves peroxy radical attack on a carbonyl carbon atom in a cyclic transition state structure. It is shown to be important in ketones when the cyclic transition state has five or more central atoms.     

Reaction products and kinetics of the reaction of NO2 with γ-Fe2O3

The reaction of NO(2) with Fe(2)O(3) has relevance for both atmospheric chemistry and catalysis. Most studies have focused on hematite, α-Fe(2)O(3), as it is the thermodynamic stable state of iron oxide; however, other forms of Fe(2)O(3) naturally occur and may have different chemistries. In this study, we have investigated the reaction products and kinetics for NO(2) reacting with γ-Fe(2)O(3) powder using diffuse reflectance infrared Fourier transform spectroscopy and compared the results to those of previous studies of NO(2) reacting with α-Fe(2)O(3). Both α- and γ-Fe(2)O(3) produce surface-bound nitrate at the pressures examined in this study (24-212 mTorr); surface-bound nitrite products are observed at all pressures for γ-Fe(2)O(3) whereas nitrite was only observed on α-Fe(2)O(3) at lower pressures. Surface-bound NO(+) and Fe-NO products are observed on γ-Fe(2)O(3), which have not been observed with α-Fe(2)O(3). The reaction kinetics show a first-order dependence on NO(2) pressure and this is used to support the hypothesis of unimolecular reaction of adsorbed NO(2) with the γ-Fe(2)O(3) surface as the slow step in the reaction mechanism. The difference in product formation between NO(2) reacting with γ-Fe(2)O(3) and previous studies of α-Fe(2)O(3) illustrate the fact that care must be taken in generalizing reactivity of different polymorphs.     

The atmospheric oxidation of hydroxyacetone: Chemistry of activated and stabilized CH3C(O)CH(OH)OO• radicals between 252 and 298 K

The products of the Cl-atom-initiated oxidation of hydroxyacetone (HYAC, CH₃C(O)CH₂OH) have been examined under conditions relevant to the earth's lower atmosphere. Over the range of temperatures studied (252-298 K), in the absence of NO_x, methylglyoxal (CH₃C(=O)CH=O, MGLY) was formed with a primary yield >84% (96 ± 9% at 298 K), while in the presence of elevated NO_x, MGLY and formic acid were both formed as major primary products. In contrast to a previous study, acetic acid was not identified as a major primary product under the conditions studied. The results are quantitatively interpreted from a consideration of the formation of a stabilized CH₃C(O)CH(OH)OO• radical, either in a ≈50% yield from the addition of O₂ to CH₃C(O)CH•(OH) or in 100% yield from the addition of HO₂ to MGLY. At high temperature and low NO_x, decomposition of the stabilized CH₃C(O)CH(OH)OO• radical to MGLY is favored, while lower temperatures and conditions of high NO_x favor bimolecular reactions of the stabilized radical, with subsequent production of formic acid. Analysis of the data allows for a semiquantitative determination of K₃ = (2.9 ± 0.4) × 10⁻¹⁶ cm³ molecule⁻¹, for the HO₂ + MGLY ↔ CH₃C(O)CH(OH)OO• equilibrium process at 298 K and a roughly order of magnitude increase in K₃ at 252 K.     

Measurement of the rate constants for the reactions of the IO• radical with sulfur-containing compounds H2S, (CH3)2S, and SO2

The reactions of iodine monoxide (IO^•) with sulfur-containing compounds, which are important for the atmospheric chemistry, are studied. An attempt is made to distinguish between the heterogeneous and homogeneous reaction pathways. It is shown that, under the experimental conditions, the reactions proceed on the wall and generate iodine atoms into the gas phase. It is found that, at room temperature, the rate constants for the gas-phase reactions of IO^• with (CH₃)₂S and H₂S are lower than 2.5 × 10⁻¹⁴ and 8.0 × 10⁻¹⁴ cm³ molecule⁻¹ s⁻¹, respectively; the rate constant for the gas-phase reaction of iodine monoxide with SO₂ ≤ 5.6 × 10⁻¹⁵ cm³ molecule⁻¹ s⁻¹.     

Reaction of benzylidene-2-naphthylamine with the ethyl ester of 3-pyridyl-β-oxopropionic acid

The reaction of benzylidene-2-naphthylamine with ethyl -(3-ethyl)--oxopropionate under various conditions gave the ethyl ester of -(2-naphthylamino)benzyl--(3-pyridyl)--oxopropionic acid, 1-(3-pyridyl)-3 phenylbenzo[f]quinoline, ethyl ester of 1-(3-pyridyl)-3-phenylbenzo[f]quinoline-2-carboxylic acid, and N-(2-naphthyl)amide of -(3-pyridyl)--oxopropionic acid. The IR, UV, and mass spectra of the products were studied and the pathways for their formation were discussed.Institute of Physical Organic Chemistry, Belorussian Academy of Sciences, Minsk 220603. Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 6, pp. 807–810, June, 1996. Original article submitted December 30, 1995.     

Oxidation of the 1-naphthyl radical C10H7• with oxygen: Thermochemistry,kinetics, and possible reaction pathways

The reaction of the 1-naphthyl radical C₁₀H₇• (A2•) with molecular (³O₂) and atomic oxygen, as part of the oxidation reactions of naphthalene, is examined using ab-initio and DFT quantum chemistry calculations. The study focuses on pathways that produce the intermediate final products CO, phenyl and C₂H₂, which may constitute a repetitive reaction sequence for the successive diminution of six-membered rings also in larger polycyclic aromatic hydrocarbons. The primary attack of ³O₂ on the 1-naphthyl radical leads to a peroxy radical C₁₀H₇OO• (A2OO•), which undergoes further propagation and/or chain branching reactions. The thermochemistry of intermediates and transition state structures is investigated as well as the identification of all plausible reaction pathways for the A2• + O₂ / A2• + O systems. Structures and enthalpies of formation for the involved species are reported along with transition state barriers and reaction pathways. Standard enthalpies of formation are calculated using ab initio (CBS-QB3) and DFT calculations (B3LYP, M06, APFD). The reaction of A2• with ³O₂ opens six main consecutive reaction channels with new ones not currently considered in oxidation mechanisms. The reaction paths comprise important exothermic chain branching reactions and the formation of unsaturated oxygenated hydrocarbon intermediates. The primary attack of ³O₂ at the A2• radical has a well depth of some 50 kcal mol⁻¹ while the six consecutive channels exhibit energy barriers below the energy of the A2• radical. The kinetic parameters of each path are determined using chemical activation analysis based on the canonical transition state theory calculations. The investigated reactions could serve as part of a comprehensive mechanism for the oxidation of naphthalene. The principal result from this study is that the consecutive reactions of the A2• radical, viz. the channels conducting to a phenyl radical C₆H₅•, CO₂, CO (which oxidized to CO₂) and C₂H₂ are by orders of magnitude faster than the activation of naphthalene by oxygen (A2 + O₂ → A2• + HO₂).     

Theoretical study of mechanism and kinetics for the reaction of hydroxyl radical with 2′-deoxycytidine

The reaction mechanism and kinetics for the abstraction of hydrogen and addition of hydroxyl radical (OH) to 2′-deoxycytidine have been studied using density functional theory at MX06-2X/6-311+G(d,p) level in aqueous solution. The optimized geometries, energies, and thermodynamic properties of all stationary points along the hydrogen abstraction reaction and the addition reaction pathways are calculated. The single-point energy calculations of the main pathways at CCSD(T)/6-31+G(d,p)//MX06-2X/6-311+G(d,p) level are performed. The rate constants and the branching ratios of different channels are evaluated using the canonical variational transition (CVT) state theory with small-curvature tunneling (SCT) correction in aqueous solution to simulate the biological system. The branching ratios of hydrogen abstraction from the C1′ site and the C5′ site and OH radical addition to the C5 site and the C6 site are 57.27% and 12.26% and 23.85% and 5.69%, respectively. The overall calculated rate constant is 4.47?×?10⁹ dm³ mol^?1 s^?1 at 298 K which is in good agreement with experiments. The study could help better understand reactive oxygen species causing DNA oxidative damage.     

A theoretical investigation on the kinetics and reactivity of the gas-phase reactions of ethyl chlorodifluoroacetate with OH radical and Cl atom at 298 K

The mechanism, kinetics, and thermochemistry of the gas-phase reactions of CF₂ClC(O)OCH₂CH₃,ethyl chlorodifluoroacetate (ECDFA) with the OH radical and Cl atom are investigated. Geometry optimization and frequency calculations have been performed at the MPWB1K/6-31+G(d,p) level of theory and energetic information is refined by using G2(MP2) theory. Transition states are searched on the potential energy surface of reaction channels and each of the transition states is characterized by the presence of only one imaginary frequency. Connections of the transition states between designated local minima are confirmed by intrinsic reaction coordinate calculation. Theoretically calculated rate constants at 298 K using the Canonical Transition State Theory are found to be in good agreement with the experimentally measured ones. Using group-balanced isodesmic reactions as working chemical reactions, the standard enthalpies of formation for CF₂ClC(O)OCH₂CH₃, CF₂ClC(O)OCH₂CH₂, and CF₃C(O)OCHCH₃ are also reported for the first time. The hydrogen abstraction occurs mainly from –CH₂ group. The T1 diagnostic calculation suggests that the multi-reference character is not an issue for such systems. The estimated atmospheric life time of ECDFA is expected to be around 24 days.     

Formation and internal energy distribution of the CH(A2Δ) radical by electron-impact dissociation of methyl halides

The dissociative excitation of CH₃X (X = Cl, Br, I) producing CH(A²Δ) is investigated by low-energy electron impact. The onsets of the CH(AX) emission from CH₃Cl, CH₃Br and CH₃I are 11.8 ± 0.3, 11.4 ± 0.3 and 11.2 ± 0.3 eV, respectively. It can be concluded that CH₃X → CH(A) + H₂(X) + X (X = Cl, Br, I) is the predominant process for formation of CH(A) near its onset. The internal energy distributions of CH(A) evaluated by means of a simulation analysis of the CH(AX) band are nearly independent of the impact energy for impinging electrons above 19 eV.     

Potential energy surface and rate constant of the inversion substitution reactions CH3X + O2 → CH3O2• + X• (X = SH,NO2)

The temperature dependence of the rate constant of the inversion substitution reactions CH₃X + O₂ → CH₃O₂^? + X^? (X = SH, NO₂), can be expressed as k = 6.8 × 10^–12(T/1000)^1.49exp(–62816 cal mol^–1/RT) cm³ s^–1 (X = SH) and k = 6.8 × 10^–12(T/1000)^1.26 × × exp(–61319 cal mol^–1/RT) cm³ s^–1 (X = NO₂), as found with the use of high-level quantum chemical methods and the transition state theory.     

Reaction of sterically congested NHC–Zn(CH2CH3)2 with substituted phenols leading to zincate complexes

We report the reaction of a sterically congested NHC–Zn(CH₂CH₃)₂ Lewis adduct (1) prepared through reaction of an equimolar ratio of 1,3-di-tert-butylimidazol-2-ylidene and diethyl zinc, with various substituted phenols (4-tert-butyl-phenol, 2,6-di-tert-butyl-4-methyl phenol, and 1-bromo-4,6-di-tert-butyl phenol). The NHC–Zn dative bond was cleaved in each of the reactions with the substituted phenols to afford the corresponding ionic complexes of imidazolium cation and aryloxo-zincate, [{(4-CMe₃C₆H₄O)₂Zn(μ-OC₆H₄-4-CMe₃)}₂{(1,3-(CMe₃)_2-ImCH}₂] (2), [{(2,6-(CMe₃)₂-4-Me-C₆H₃O)₂}Zn{(1,3-(CMe₃)_2-ImCH}] (3), and [{(1-Br-3,5-(CMe₃)₂C₆H₂O)₂}_2-Zn{(1,3-(CMe₃)_2-ImCH}] (4), where 1,3-(CMe₃)_2-ImCH) is imidazolium carbocation. The molecular structures of 1–4 were established by X-ray diffraction analyses and from the solid-state structures of 2–4, it was confirmed that, in all the compounds, zinc ions are coordinated through substituted phenolate groups.     

Effect of Reaction Temperature and Pressure on the Metathesis Reaction between Ethene and 2-Butene to Propene on the WO3/Al2O3-HY Catalyst

Effect of reaction temperature and pressure on the metathesis reaction between ethene and 2-butene to propene was studied on the WO3/γ-Al2O3-HY catalyst. The activity is found to increase with elevated temperature and reaches a plateau at 150-240℃. After that, the activity undergoes a remarkable decrement at too high temperature. The effect of temperature is elucidated by the oxidation state of tungsten species. The evaluation results also indicate that the stability is dependent on this reaction parameter. Medium pressure (0.5-0.8 MPa) is favorable for stability, while atmospheric pressure or too high pressure (>1.0 MPa) deteriorates the stability. For explanation, UV Vis, FT-IR, O2-TPO, and TG techniques are used to characterize the spent catalysts.     

Reactions of CH3SH and CH3SSCH3 with gas-phase hydrated radical anions (H2O)n(•-), CO2(•-)(H2O)n, and O2(•-)(H2O)n

The chemistry of (H(2)O)(n)(?-), CO(2)(?-)(H(2)O)(n), and O(2)(?-)(H(2)O)(n) with small sulfur-containing molecules was studied in the gas phase by Fourier transform ion cyclotron resonance mass spectrometry. With hydrated electrons and hydrated carbon dioxide radical anions, two reactions with relevance for biological radiation damage were observed, cleavage of the disulfide bond of CH(3)SSCH(3) and activation of the thiol group of CH(3)SH. No reactions were observed with CH(3)SCH(3). The hydrated superoxide radical anion, usually viewed as major source of oxidative stress, did not react with any of the compounds. Nanocalorimetry and quantum chemical calculations give a consistent picture of the reaction mechanism. The results indicate that the conversion of e(-) and CO(2)(?-) to O(2)(?-) deactivates highly reactive species and may actually reduce oxidative stress. For reactions of (H(2)O)(n)(?-) with CH(3)SH as well as CO(2)(?-)(H(2)O)(n) with CH(3)SSCH(3), the reaction products in the gas phase are different from those reported in the literature from pulse radiolysis studies. This observation is rationalized with the reduced cage effect in reactions of gas-phase clusters.     

Accurate ab initio potential energy surface, thermochemistry, and dynamics of the Cl(2P, 2P(3/2) + CH4 → HCl + CH3 and H + CH3Cl reactions

We report a high-quality, ab initio, full-dimensional global potential energy surface (PES) for the Cl((2)P, (2)P(3/2)) + CH(4) reaction, which describes both the abstraction (HCl + CH(3)) and substitution (H + CH(3)Cl) channels. The analytical PES is a least-squares fit, using a basis of permutationally invariant polynomials, to roughly 16,000 ab initio energy points, obtained by an efficient composite method, including counterpoise and spin-orbit corrections for the entrance channel. This composite method is shown to provide accuracy almost equal to all-electron CCSD(T)/aug-cc-pCVQZ results, but at much lower computational cost. Details of the PES, as well as additional high-level benchmark characterization of structures and energetics are reported. The PES has classical barrier heights of 2650 and 15,060 cm(-1) (relative to Cl((2)P(3/2)) + CH(4)(eq)), respectively, for the abstraction and substitution reactions, in good agreement with the corresponding new computed benchmark values, 2670 and 14,720 cm(-1). The PES also accurately describes the potential wells in the entrance and exit channels for the abstraction reaction. Quasiclassical trajectory calculations using the PES show that (a) the inclusion of the spin-orbit corrections in the PES decreases the cross sections by a factor of 1.5-2.5 at low collision energies (E(coll)); (b) at E(coll) ≈ 13,000 cm(-1) the substitution channel opens and the H/HCl ratio increases rapidly with E(coll); (c) the maximum impact parameter (b(max)) for the abstraction reaction is ~6 bohr; whereas b(max) is only ~2 bohr for the substitution; (d) the HCl and CH(3) products are mainly in the vibrational ground state even at very high E(coll); and (e) the HCl rotational distributions are cold, in excellent agreement with experiment at E(coll) = 1280 cm(-1).     

Damage of aromatic amino acids by the atmospheric free radical oxidant NO3˙ in the presence of NO2˙, N2O4, O3 and O2

Analysis of the products formed in the reaction of NO(3)˙ with the N- and C-protected aromatic amino acids 1-5, which was performed under conditions that simulate exposure of biosurfaces to environmental pollutants, revealed insight how this important atmospheric free-radical oxidant can cause irreversible damage. In general, NO(3)˙ induced electron transfer at the aromatic ring is the exclusive initial pathway in a multi-step sequence, which ultimately leads to nitroaromatic compounds. In the reaction of NO(3)˙ with tryptophan 5 tricyclic products 12 and 13 are formed through an intramolecular, oxidative cyclization involving the amide moiety. In addition to this, strong indication for formation of N-nitrosamides was obtained, which likely result from reaction with N(2)O(4) through an independent non-radical pathway.     

Kinetics of CH(X2Π) radical reactions with propane,isobutane and neopentane

Rate constants over the temperature range 298–689 K are reported for the reaction of CH(X²Π) radicals with C₃H₈, i-C₄H₁₀ and neo-C₅H₁₂. The CH radical was generated by multiphoton laser photolysis of CHBr₃ and its disappearance monitored by laser-induced fluorescence (LIF) at 429.8 nm. Absolute rate constants were determined as a function of temperature and total pressure. The following Arrhenius parameters were derived: k = (1.85 ± 0.13) × 10⁻¹⁰ exp[(240±30)/T] cm³/s for CH+propane; k = (2.03±0.19)×10⁻¹⁰ exp[(240±40)/T] cm³/s for CH+isobutane; k = (1.61±0.10)×10⁻¹⁰ exp[(340±30)/T] cm³/s for CH+neopentane, all independent of total pressure. The negative temperature dependences along with the energetics and lack of pressure effects lead to the conclusion that the reactions proceed by CH insertion into the alkane. The activated adduct thus formed rapidly decomposes via many energetically accessible channels. An analysis of CH reactions with C₁ to C₅ alkanes shows an increase in the room temperature rate constants in going from C₁ to C₄ irrespective of the nature of CH bonds. The rate constant then begins to level off near ≈ 5 × 10⁻¹⁰ cm/s for C₄ and C₅ alkanes.     

Electronic spectra and predissociation of jet-cooled CH3O and CH3O-Ar in the Ã2A1 state

The òA₁-X̃²E electronic spectrum of jet-cooled methoxy radical has been examined by the LIF technique. Two newly discovered vibrational bands of 2930 and 1390 cm⁻¹ are assigned to ν₁ (totally symmetric C-H stretching) and a degenerate ν₅ mode, respectively. The predissociation, CH₃O → CH₃ + O in the òA₁ state is newly elucidated and the threshold energy is deter- mined as 5100 cm⁻¹ from the potential minimum. For the CH₃O-Ar complex, the threshold energy is reduced by about 100 cm⁻¹.     

Theoretical Study of the Scattering Resonance State, Reaction Mechanism and Partial Potential Energy Surface of the F＋CH4→HF ＋CH3 Reaction

Many reactions with fluorine atoms have the important applications in the areas of theatmosphere and the chemical lasers, such as the reaction of fluorine atoms with methane. F( 2 P) CH 4 (X1A1)→HF(X1 Σ ) CH 3 (X 2 A′′2) ?H0300k=-32.3 kcal mol ?1 It…     

The distonic ion ·CH2CH2CH+OH,keto ion CH3CH2CH=O +·, enol ion CH3CH=CHOH+·, and related C3H6O+· radical cations. Stabilities and isomerization proclivities studied by dissociation and neutralization-reionization

Metastable ion decompositions, collision-activated dissociation (CAD), and neutralization-reionization mass spectrometry are utilized to study the unimolecular chemistry of distonic ion ^·CH₂CH₂CH^?OH (2^+·) and its enol-keto tautomers CH₃CH=CHOH^?· (1 ^+·) and CH₃CH₂CH=O ^+· (3^+·). The major fragmentation of metastable 1^+·–3^+· is H^· loss to yield the propanoyl cation, CH₃CH₂C≡O⁺. This reaction remains dominant upon collisional activation, although now some isomeric CH₂=CH-CH⁺ OH is coproduced from all three precursors. The CAD and neutralization-reionization (⁺NR⁺) spectra of keto ion 3 ^+· are substantially different from those of tautomers 2^+· and 1^+·. Hence, 3^+· without sufficient energy for decomposition (i. e. , “stable” 3^+·) does not isomerize to the ther-modynamically more stable ions 2^+· or 1^+·, and the 1,4-H rearrangement H-CH₂CH₂CH=O^+·(3 ^+·) → CH₂CH₂CH⁺ O-H (2 ^+·) must require an appreciable critical energy. Although the fragment ion abundances in the ⁺ NR ⁺ (and CAD) spectra of 1 ^+· and 2 ^+· are similar, the relative and absolute intensities of the survivor ions (recovered C₃H₆O^+· ions in the ⁺NR⁺ spectra) are markedly distinct and independent of the internal energy of 1 ^+· and 2 ^+·. Furthermore, 1 ^+· and 2 ^+· show different MI spectra. Based on these data, distonic ion 2 ^+· does not spontaneously rearrange to enol ion 1 ^+· (which is the most stable C₃H₆O^+· of CCCO connectivity) and, therefore, is separated from it by an appreciable barrier. In contrast, the molecular ions of cyclopropanol (4 ^+·) and allyl alcohol (5 ^+·) isomerize readily to 2 ^+·, via ring opening and 1,2-H^? shift, respectively. The sample found to generate the purest 2 ^+· is α-hydroxy-γ-butyrolactone. Several other precursors that would yield 2 ^+· by a least-motion reaction cogenerate detectable quantities of enol ion 1 ^+·, or the enol ion of acetone (CH₂=C(CH₃)OH^+·, 6 ^+·), or methyl vinyl ether ion (CH₃OCH=CH ₂ ^+· , 7 ^+·). Ion 6 ^+· is coproduced from samples that contain the —CH₂—CH(OH)—CH₂— substructure, whereas 7 ^+· is coproduced from compounds with methoxy substituents. Compared to CAD, metastable ion characteristics combined with neutralization-reionization allow for a superior differentiation of the ions studied.