Quantitative investigation of the interaction between granulocyte-macrophage colony-stimulating factor and heparin by capillary zone electrophoresis

The interactions between granulocyte-macrophage colony-stimulating factor (GM-CSF) and heparin or low-molecular weight heparin (LMWH) were studied by CZE. It was found that GM-CSF could bind to both heparin and LMWH. The binding constants were calculated from Scatchard regression to be (6.5 +/- 0.8) x 10(5)/M and (11.2 +/- 0.7) x 10(5)/M, respectively. The specificity of the interaction between GM-CSF and heparin was also studied by employing another sulfated K carrageenan oligosaccharide as a control. Results showed that K carrageenan oligosaccharide could not interact with GM-CSF, indicating that GM-CSF could specifically interact with heparin.     

Capillary zone electrophoresis investigation of the interaction between heparin and granulocyte-colony stimulating factor

The interaction between standard heparin, low-molecular-weight heparin (LMWH), and granulocyte-colony stimulating factor (G-CSF) was studied by capillary zone electrophoresis. Both qualitative and quantitative characterizations of the heparin-protein binding were determined. The binding constants of the two different groups of heparins with G-CSF, calculated from the Scatchard plot by regression, were 4.805 x 10(5) M(-1) and 4.579 x 10(5) M(-1), respectively. The two binding constants measured are of the same order of magnitude at 10(5) M(-1), indicating that LMWH contains most of the functional groups bound to G-CSF by standard heparin.     

Comparative analysis of complex formation of magnesium and calcium ions with low-molecular-weight and unfractionated heparin

The acid-base and complexing properties of Logiparin (a low-molecular-weight variety (LMH) of heparin (H₄L) with magnesium and calcium ions were studied using mathematical modeling of chemical equilibria in aqueous solutions of Logiparin and its solutions with magnesium and calcium ions and pH titration. The heparin concentration was set equal to the concentration of its disaccharide units. The protonated heparin form HL^3? and the most significant heparin complexes of Mg²⁺ and Ca²⁺ were identified; relevant formation constants were estimated. Comparative analysis of the results is carried out against available data on ion complexing with unfractionated (high-molecular-weight) heparin (HMH). The Logiparin complexes of calcium and magnesium ions are inferior to the HMH complexes in both their formation constants in solution and their effect on the decrease in the equilibrium concentration of free calcium ions, a participant of all blood coagulation processes. This distinction creates prerequisites for the lower blood-coagulating activity of Logiparin compared to that of HMH, which is for the first time confirmed in biological experiments with the in vitro administration of the same concentration of HMH or LMH into the blood plasma of laboratory rats.     

Electrophoretic screening of ligands under suppressed EOF with an inert phospholipid coating

The applicability of dual injection CE for affinity selection of biopolymers that contain multiple binding sites is demonstrated. The efficient analysis of biomolecules such as carbohydrates and proteins, as well as pharmaceuticals by CE requires the reduction or elimination of nonspecific interactions with the capillary surface. Phospholipids are integral components of cell membranes and aqueous phospholipid liquid crystals adopt a bilayer structure on fused-silica. This phospholipid surface does not interact significantly with the following biomolecules: serum albumin, the 96-110 heparin binding domain of amyloid precursor protein (APP), polydisperse glycosaminoglycans, and variable chain-length oligosaccharides. Pharmaceuticals including five anionic nonsteroidal anti-inflammatory drugs, three cationic analgesics, and two cationic beta-blockers, also show minimal interaction with the surface. In addition, the use of a phospholipid coating suppresses EOF, which enables reversed-polarity separations, dual opposite injection CE, affinity screening via CE by dual opposite injection, and serial target-ligand injections.     

High affinity DNAzyme-based ligands for transition metal cations - a prototype sensor for Hg2+

Inspired by recent interest in DNAzymes as transition metal ion sensors, a survey of the effects of various transition metals on the intramolecular cleavage rate of an imidazole modified, M(2+)-independent, self-cleaving "9(25)-11" DNA is reported. In particular, 9(25)-11 activity was strongly inhibited by Hg(2+)(K(d)(APP)= 110 +/- 9 nM). It is postulated that the affinity and selectivity of 9(25)-11 for Hg(2+) stems from the fact that this synthetically modified DNAzyme contains imidazoles. This study demonstrates the utility of modified nucleotides in developing DNAzyme sensors for metals ions, especially those for which unmodified nucleic acids might not serve as inherently good ligands.     

Tetrad effect in the adsorption of the lanthanides on zeolite Y

The adsorption of the lanthanides (except for Pm) on the zeolite Y was investigated under various solution conditions of nitrate ion concentration ([NO(-)(3)]: 0.001-2 mol/dm(3)) and total lanthanide concentration (from 0.0001 to 0.001 mol/dm(3)). The solutions of the lanthanide nitrates were equilibrated with the zeolite samples at 296 K. The concentrations of lanthanides in the initial and equilibrium solutions were determined by means of spectrophotometrical method with Arsenazo III reagent and distribution constants K(d) of the lanthanides between aqueous and zeolite phases were calculated. The evident concave tetrad effect in the change of logK(d) values (nitrate concentrations 0.4-2 mol/dm(3)) within the lanthanide series was noticed and an attempt at its explanation through the comparison of covalence in LnO bonds existing in triple bond AlO(1/3Ln)Si triple bond species in the zeolite phase and in Ln(NO(3))(2+) complexes forming in the aqueous phase was presented. The weak convex tetrad effect for equilibrium nitrate concentrations 0.001-0.32 mol/dm(3), manifesting in the change of logK(d) values and in the alteration of logK (adsorption constants), is evidence of the complexation of the tripositive lanthanide ions by the oxygens originating both from water molecules and from the zeolite framework.     

Extraction equilibria of some transition metal ions by bis(2-ethylhexyl)phosphinic acid

Measurements of dimerization constants (K(d,HR)) and distribution constants (K(D,HR)) of bis(2-ethylhexyl)phosphinic acid (PIA-8) in three kinds of organic diluents were carried out by a potentiometric two-phase titration technique at 298 +/- 0.1 K. Extraction of iron(III), zinc(II), copper(II), manganese(II), cadmium(II), cobalt(II) and nickel(II) by PIA-8 from 1.0 mol dm(-3) ammonium sulfate solution into heptane was investigated as a function of pH and extractant concentration. The data have been analyzed both graphically and numerically to determine the stoichiometry of extracted species and their extraction constants. The extracted metal species were found to be FeR(3) . 2HR for iron(III), ZnR(2) and ZnR(2) . 3HR for zinc(II), CuR(2) . HR and CuR(2) . 5HR for copper(II), MnR(2) . 2HR and MnR(2) . 3HR for manganese(II), CdR(2) . 3HR for cadmium(II), CoR(2) . HR and CoR(2) . 4HR for cobalt(II) and NiR(2) . 3HR and NiR(2) . 6HR for nickel(II), respectively.     

In situ growth of nanogold on quartz crystal microbalance and its application in the interaction between heparin and antithrombin III

A novel biosensor for detecting antithrombin III (AT III) was constructed based on in situ growth of nanogold on the gold electrode of quartz crystal microbalance (QCM). The growth process of nanogold was monitored by QCM in real time. Heparin was used as the affinity ligand and immobilized onto the nanogold modified gold electrode. A flow injection analysis-quartz crystal microbalance (FIA-QCM) system was used to investigate the relationship between nanogold growth and the AT III response. Along with the nanogold particle growth within initial 5 min, the amount of heparin immobilized onto the nanogold modified electrode increased quickly. Correspondingly, the frequency response to AT III binding increased rapidly at the same time. After that, both the immobilized amount of heparin and the sensor response to AT III decreased gradually. Compared with the directly immobilized large nanogold particles, the in situ grown particles with the same size occupy more sensor surface, resulting in higher frequency shifts to AT III in the interaction study between heparin and AT III. The obtained constants of AT III binding to immobilized heparin are k(ass)=(1.65+/-0.12)x10(3) L/mols, k diss=(2.63+/-0.18)x10(-2) 1/s and K(A)=(6.27+/-0.42)x10(4) L/mol.     

A dual-level ab initio and hybrid density functional theory dynamics study on the unimolecular decomposition reaction C2H5O-->CH2O + CH3

We present a direct ab initio and hybrid density functional theory dynamics study of the thermal rate constants of the unimolecular decomposition reaction of C2H5O-->CH2O + CH3 at a high-pressure limit. MPW1K/6-31+G(d,p), MP2/6-31+G(d,p), and MP2(full)/6-31G(d) methods were employed to optimize the geometries of all stationary points and to calculate the minimum energy path (MEP). The energies of all the stationary points were refined at a series of multicoefficient and multilevel methods. Among all methods, the QCISD(T)/aug-cc-pVTZ energies are in good agreement with the available experimental data. The rate constants were evaluated based on the energetics from the QCISD(T)/aug-cc-pVTZ//MPW1K/6-31+G(d,p) level of theory using both microcanonical variational transition state theory (microVT) and RRKM theory with the Eckart tunneling correction in the temperature range of 300-2500 K. The calculated rate constants at the QCISD(T)/aug-cc-pVTZ/MPW1K/6-31+G(d,p) level of theory are in good consistent with experimental data. The fitted three-parameter Arrhenius expression from the microVT/Eckart rate constants in the temperature range 200-2500 K is k = 2.52 x 10(12)T(0.41)e(-8894.0/T) s(-1). The falloff curves of pressure-dependent rate constants are performed using master-equation method within the temperature range of 391-471 K. The calculated results are in good agreement with the available experimental data.     

EPR and DFT study on the stabilization of radiation-generated methyl radicals in dehydrated Na-A zeolite

Electron paramagnetic resonance (EPR) spectroscopy was applied to study paramagnetic species stabilized in Na-A zeolite exposed to gaseous methane and gamma-irradiated at 77 K. Two types of EPR spectra were recorded during thermal annealing of zeolite up to room temperature. Owing to the results for the zeolite exposed to (13)CH(4) the multiplet observed at 110 K was assigned to a (.-)CH(3)...Na(+) complex. After decay of the multiplet, the isotropic quartet of methyl radical was recorded in the temperature range of 170-280 K. On the basis of the EPR parameters it is postulated that (.-)CH(3) radicals in this temperature region are able to freely rotate inside the zeolite cage. The structures of the (.-)CH(3)...Na(+) adsorption complex and respective hyperfine coupling constants were calculated by applying DFT quantum chemical methods. Two different models were applied to represent the zeolite framework: the 6T structure of one six-membered ring and the 3T cluster. The hyperfine coupling constants calculated for the (.-)CH(3)...Na(+) adsorption complex for both applied models show very good agreement with those obtained experimentally.     

Reactions of OH with butene isomers: measurements of the overall rates and a theoretical study

Reactions of hydroxyl (OH) radicals with 1-butene (k(1)), trans-2-butene (k(2)), and cis-2-butene (k(3)) were studied behind reflected shock waves over the temperature range 880-1341 K and at pressures near 2.2 atm. OH radicals were produced by shock-heating tert-butyl hydroperoxide, (CH(3))(3)-CO-OH, and monitored by narrow-line width ring dye laser absorption of the well-characterized R(1)(5) line of the OH A-X (0, 0) band near 306.7 nm. OH time histories were modeled using a comprehensive C(5) oxidation mechanism, and rate constants for the reaction of OH with butene isomers were extracted by matching modeled and measured OH concentration time histories. We present the first high-temperature measurement of OH + cis-2-butene and extend the temperature range of the only previous high-temperature study for both 1-butene and trans-2-butene. With the potential energy surface calculated using CCSD(T)/6-311++G(d,p)//QCISD/6-31G(d), the rate constants and branching fractions for the H-abstraction channels of the reaction of OH with 1-butene were calculated in the temperature range 300-1500 K. Corrections for variational and tunneling effects as well as hindered-rotation treatments were included. The calculations are in good agreement with current and previous experimental data and with a recent theoretical study.     

Cooperative h-bonds of macromolecules. 1. Binding of low-molecular-weight ligands to polymers

Equilibrium bindings of two low-molecular-weight hydrogen bond acceptor ligands, tetrahydrofuran (THF) and pyridine (PH), and their fully deuterated analogues (TDF, PD) with poly(4-vinylphenol) (PVF) and its low-molecular-weight model, a hydrogen bond donor 4-isopropylphenol (IPP), were studied using spectroscopic (NMR) and theoretical (ab initio SCF-DFT B3LYP/6-31G(d)) methods as a first step of a general study of cooperative hydrogen bonding of H-bond-donating and -accepting macromolecules. Two reliable experimental methods of measuring the fraction of H-bonded or free ligands, which can be used as an indirect tool in further studies of macromolecular cooperative binding, were devised and examined in this study. The methods are complementary and independent. They are based on one hand on (2)H quadrupolar or (1)H longitudinal NMR relaxation and, on the other hand, on (2)H or (1)H PFG NMR self-diffusion measurement, using the pulsed-field-gradient spin-echo (PGSE) and pulsed-field-gradient stimulated echo (PGSTE) methods. It was shown that both the relaxation and PFG methods need viscosity correction using as an internal standard a relatively inert compound of a relaxation/diffusion rate similar to that of the internal standard (CDCl(3) or HMDSO in the present case). After such normalization, the reliability of both methods was checked by calculating the equilibrium constants K of binding under a variety of ligand/donor ratios beta. Excepting the rather impractical region of low beta values, where cooperative self-association of the H-donating polymer takes place, both methods were found to be reasonably reliable. A slight anomaly in the relaxation behavior of pyridine and its stronger-than-expected binding to PVF was plausibly explained (using high-precision quantum mechanical calculations) by additional formation of weak C-H...O bonds to the neighboring units.     

A kinetic analysis of the photolysis of mixtures of acetone and propylene

The photolysis of mixtures of acetone and propylene at 308 nm has been studied kinetically from approximately 300 K to 580 K. Rate constants were calculated for the reactions at total pressures ranging from 110 torr to 750 torr and for [C₃H₆]/[(CH₃)₂CO] ratios in the range 0.03 to 3.3. No dependence of the rate constants on total pressure or on this concentration ratio could be detected within this range of conditions. The temperature dependence of the rate constants is given by © 1994 John Wiley & Sons, Inc.     

Electrophoresis for the analysis of heparin purity and quality

The adulteration of raw heparin with oversulfated chondroitin sulfate (OSCS) in 2007-2008 produced a global crisis resulting in extensive revisions to the pharmacopeia monographs and prompting the FDA to recommend the development of additional methods for the analysis of heparin purity. As a consequence, a wide variety of innovative analytical approaches have been developed for the quality assurance and purity of unfractionated and low-molecular-weight heparins. This review discusses recent developments in electrophoresis techniques available for the sensitive separation, detection, and partial structural characterization of heparin contaminants. In particular, this review summarizes recent publications on heparin quality and related impurity analysis using electrophoretic separations such as capillary electrophoresis (CE) of intact polysaccharides and hexosamines derived from their acidic hydrolysis, and polyacrylamide gel electrophoresis (PAGE) for the separation of heparin samples without and in the presence of its relatively specific depolymerization process with nitrous acid treatment.     

Macromolecule-macromolecule interaction in drug distribution. II. Effect of alpha-globulin on saturable uptake of fractionated [3H]heparin by rat parenchymal hepatocytes in primary culture.

The uptake of fractionated [3H]heparin was investigated in rat parenchymal hepatocytes in primary culture. The initial uptake of fractionated [3H]heparin was found to be saturable with the maximum uptake velocity (Vmax) of 10.1 +/- 1.46 pmol/min/mg protein and the Michaelis constant (Km) of 284 +/- 47.9 nM. The effect of alpha-globulin, the major protein binding to fractionated [3H]heparin, on the saturable uptake profile of fractionated [3H]heparin was also investigated. The uptake clearance was reduced, depending on the concentration of fractionated [3H]heparin, by the addition of 1 mg/ml alpha-globulin. We assumed that fractionated 3H-heparin bound to alpha-globulin was not available for uptake and that the reduction in the uptake clearance was solely attributable to the saturable binding of fractionated [3H]heparin to alpha-globulin. The uptake clearance versus concentration profile was analyzed to obtain the dissociation constant (Kd) of 31.8 nM and the capacity (n) of 0.047 for the binding of fractionated [3H]heparin to alpha-globulin. The saturable binding of fractionated [3H]heparin to alpha-globulin was supported by in vitro binding experiments using gel chromatography, in which bound fractionated [3H]heparin decreased with the concentration of fractionated [3H]heparin in the presence of alpha-globulin. In conclusion, the present study demonstrated the saturable uptake of fractionated [3H]heparin by rat parenchymal hepatocytes and the saturable binding of fractionated [3H]heparin to alpha-globulin. The saturable uptake may suggest the involvement of a specific transport system such as receptor-mediated endocytosis.     

Determination of the total dissolved sulphide in the pH range 3-11.4 with sulphide selective ISE and Ag/A92S electrodes

An electrochemical method for the determination of the total sulphide concentration of sewage water samples has been studied using a potentiometric cell containing either a sulphide ion selective ISE-glass electrode pair or a Ag/Ag(2)S electrode-glass electrode system. The performance of the two sulphide ion sensors was investigated and compared in both acidic and basic pH ranges. It was proved that the cell potential can be made directly proportional to the logarithm of the total sulphide concentration when both the pH < lg K(2) - 1.5 condition (acidic range) and also when the lg K(2) + 1.5 < pH < lg K(1) - 1.5 condition prevails in the system (alkaline range); where K(1) and K(2) are the first and second protonation constants of the sulphide ion, respectively. A suitable calibration method for a wide range of sulphide concentration is also presented for both ranges of the pH scale. The overall performance of the measuring system was tested using model solutions and real waste water samples.     

Preparation and characterization of self-assembled nanoparticles of heparin-deoxycholic acid conjugates

Various deoxycholic acid (DOCA) bearing heparin (HD) amphiphilic conjugates with different degrees of substitution (DS) with DOCA were synthesized using heparin as a hydrophilic segment and DOCA as a hydrophobic segment. Structural characteristics of these HD conjugates were investigated using 1H NMR, dynamic light scattering, zeta potential, transmission electron microscopy (TEM), and fluorescence spectroscopy. HD conjugates provided monodispersed self-aggregates in water, with mean diameters decreasing with increasing DOCA DS in the range of 120-200 nm. HD aggregates were covered with negatively charged heparin shells, exhibiting xi potentials near -56 mV. The critical aggregation concentration (cac) of the HD (0.02-0.003 mg/mL) depended upon DOCA DS. TEM images demonstrated that the shape of the self-aggregates was spherical. Partition equilibrium constants, Kv, for pyrene in the self-aggregates in water indicated that increasing DS enhanced the hydrophobicity of the self-aggregate inner core. The mean aggregation number of DOCA per hydrophobic microdomain, estimated by the fluorescence quenching methods using cetylpyridinium chloride, indicated that five to nine of HD chains comprised a hydrophobic domain in the conjugates.     

Liquid-liquid distribution of ion-associates of acidic dyes with quaternary ammonium counter-ions

Diprotic acid dyes [H(2)A: Bromophenol Blue (BPB), Bromochlorophenol Blue (BCPB), Bromocresol Purple (BCP), Bromocresol Green (BCG), Bromothymol Blue (BTB)] can be extracted as 1:1 ion-associates Q(+)HA(-) and 1:2 ion-associates (Q(+))(2)A(2-) with quaternary ammonium cations (Q(+)) into chloroform. The extraction constants (log K(ex)) of the 1:1 and 1:2 ion-associates have been determined. Linear relationships between log K(ex) and the number of methylene groups in the quaternary ammonium ions were observed; from the slope of the line, the contribution of a methylene group to log K(ex) was found to be 0.43-0.65. The extractability with alkyltrimethylammonium cations was larger than that with symmetrical tetra-alkylammonium cations, for both the 1:1 and 1:2 ion-associates. From the extraction constants obtained, the extractability of acidic dyes was in the order BTB > BCG > BPB > BCPB > BCP.     

Rate constants for the gas-phase reactions of OH radicals with dimethyl phosphonate over the temperature range of 278-351 K and for a series of other organophosphorus compounds at approximately 280 K

Rate constants for the gas-phase reactions of OH radicals with dimethyl phosphonate [DMHP; (CH3O)2P(O)H] were measured over the temperature range of 278-351 K at atmospheric pressure of air using a relative rate method with 4-methyl-2-pentanone as the reference compound. The Arrhenius expression obtained was 1.01 x 10(-12) e((474 +/- 159)/T) cm(3) molecule(-1) s(-1), where the indicated error is two least-squares standard deviations and does not include uncertainties in the rate constants for the reference compound. Rate constants for the gas-phase reactions of OH radicals with dimethyl methylphosphonate [DMMP, (CH3O)2P(O)CH3], dimethyl ethylphosphonate [DMEP, (CH3O)2P(O)C2H5], diethyl methylphosphonate [DEMP, (C2H5O)2P(O)CH3], diethyl ethylphosphonate [DEEP, (C2H5O)2P(O)C2H5], and triethyl phosphate [TEP, (C2H5O)3PO] were also measured at 278 and/or 283 K for comparison with a previous study (Aschmann, S. M.; Long, W. D.; Atkinson, R. J. Phys. Chem. A, 2006, 110, 7393). With the experimental procedures employed, experiments conducted at temperatures below the dew point where a water film was present on the outside of the Teflon reaction chamber resulted in measured rate constants which were significantly higher than those expected from the extrapolation of rate data obtained at temperatures (283-348 K) above the dew point. Using rate constants measured at > or = 283 K, the resulting Arrhenius expressions (in cm(3) molecule(-1) s(-1) units) are 6.25 x 10(-14) e((1538 +/- 112)/T) for DMMP (283-348 K), 9.03 x 10(-14) e((1539 +/- 27)/T) for DMEP (283-348 K), 4.35 x 10(-13) e((1444 +/- 148)/T) for DEMP (283-348 K), 4.08 x 10(-13) e((1485 +/- 328)/T) for DEEP (283-348 K), and 4.07 x 10(-13) e((1448 +/- 145)/T) for TEP (283-347 K), where the indicated errors are as above. Aerosol formation at 296 +/- 2 K from the reactions of OH radicals with these organophosphorus compounds was relatively minor, with aerosol yields of < or = 8% in all cases.     

Seasonal characteristics of biomass burning contribution to Beijing aerosol

Along with the rapid economic growth and urbani-zation, a number of cities in China are facing the problem of severe air pollution with airborne particles (particulate matter) as the major pollutant identified most frequently. Urban airborne particles are…