Headspace mass spectrometry methodology: application to oil spill identification in soils

In the present work we report the results obtained with a methodology based on direct coupling of a headspace generator to a mass spectrometer for the identification of different types of petroleum crudes in polluted soils. With no prior treatment, the samples are subjected to the headspace generation process and the volatiles generated are introduced directly into the mass spectrometer, thereby obtaining a fingerprint of volatiles in the sample analysed. The mass spectrum corresponding to the mass/charge ratios (m/z) contains the information related to the composition of the headspace and is used as the analytical signal for the characterization of the samples. The signals obtained for the different samples were treated by chemometric techniques to obtain the desired information. The main advantage of the proposed methodology is that no prior chromatographic separation and no sample manipulation are required. The method is rapid, simple and, in view of the results, highly promising for the implementation of a new approach for oil spill identification in soils. Figure PCA score plots illustrate clear discrimination of types of crude oil in polluted soil samples (e.g. results are shown for vertisol)     

Electrochemical quantification of reactive oxygen and nitrogen: challenges and opportunities

Reactive oxygen species (ROS) and reactive nitrogen species (RNS) play a crucial role in chemical signaling processes of biological cells. Electrochemistry is one of the rare methods able to directly detect these species. ROS and RNS can be monitored in the local microenvironment of cells in real time at the site where the actual signaling takes place. This review presents recent advances made with amperometric electrochemical techniques. Existing challenges for the quantification of ROS and RNS in biological systems are discussed to promote the development of innovative and reliable cell-based assays. Figure Reactive oxygen and nitrogen species (ROS & RNS) are produced biological cells. An amperometric sensor is placed in close proximity. The recorded current I is used to determine fluxes of certain species.

Rapid separation of strychnine and brucine on a dynamically modified poly(dimethylsiloxane) microchip followed by electrochemical detection

A method has been developed for rapidly separating and detecting strychnine and brucine using a poly(dimethysiloxane) (PDMS) microchip and electrochemical (EC) detection. PDMS microchannels dynamically modified by Brij35 are shown to be more efficient than native ones. The two analytes are well separated within 90 s in 70 mmol/L acetate buffer (pH 5.5) containing 0.01% (v/v) Brij35. Detection limits were found to be 1.0 μmol/L for strychnine and 0.2 μmol/L for brucine at S/N=3. The method was used to determine trace strychnine and brucine in rat serum, and the results obtained correlate well with those obtained via high-performance liquid chromatography (HPLC).      

Investigation of the magnetic properties of ferritin by AFM imaging with magnetic sample modulation

Individual ferritin molecules can be sensitively detected using magnetic sample modulation (MSM) combined with contact mode atomic force microscopy (AFM). To generate an oscillating magnetic field, an alternating current (AC) was applied to a solenoid placed within the base of the AFM sample stage. When a modulated electromagnetic field is applied to samples, ferromagnetic and paramagnetic nanomaterials are induced to vibrate. The flux of the AC electromagnetic field causes the ferritin samples to vibrate with corresponding rhythm and periodicity of the applied field. This motion can be detected and mapped using contact mode AFM with a soft, nonmagnetic cantilever. Changes in the phase and amplitude of the periodic motion of the sample are sensed by the tip to selectively map vibrating magnetic nanomaterials. Particle lithography was used to create nanopatterned test platforms of ferritin for MSM measurements. Regularly spaced structures of proteins provide precise reproducible dimensions for multiple successive surface measurements at dimensions of tens of nanometers. Figure Ring patterns of ferritin were used as nanoscale test platforms to characterize magnetic properties at the level of individual proteins with AFM imaging

Cell separation by the combination of microfluidics and optical trapping force on a microchip

We investigated properties of cells affecting their optical trapping force and successfully established a novel cell separation method based on the combined use of optical trapping force and microfluidics on a microchip. Our investigations reveal that the morphology, size, light absorption, and refractive index of cells are important factors affecting their optical trapping force. A sheath flow of sample solutions created in a microchip made sample cells flow in a narrow linear stream and an optical trap created by a highly focused laser beam captured only target cells and altered their trajectory, resulting in high-efficiency cell separation. An optimum balance between optical trapping force and sample flow rate was essential to achieve high cell separation efficiency. Our investigations clearly indicate that the on-chip optical trapping method allows high-efficiency cell separation without cumbersome and time-consuming cell pretreatments. In addition, our on-chip optical trapping method requires small amounts of sample and may permit high-throughput cell separation and integration of other functions on microchips. Figure Optical trapping in a microchannel allows high-efficiency separation of cells, e.g., dead and live HeLa cells

Partition layer-modified substrates for reversible surface-enhanced Raman scattering detection of polycyclic aromatic hydrocarbons

Herein, we present progress towards an analytical sensor for polycyclic aromatic hydrocarbons (PAHs) using surface-enhanced Raman scattering (SERS) on partition layer-modified nanostructured substrates. Specifically, a 1-decanethiol monolayer has been assembled on a silver film over nanospheres substrate to concentrate PAHs within the zone of SERS detection. Both anthracene and pyrene were detected with limits of detection at 300 and 700 pM, respectively. The measured SERS spectra allowed for easy distinction of the two PAH compounds, due to varying peak locations, and insight into the partitioning mechanism. Additionally, exposure to a common environmental interferant, Suwannee River fulvic acid, did not impede the measurement of the PAHs, and the sensor is reusable after a short exposure to 1-octanol. Finally, the utility of this sensing platform for PAH detection was compared to that achievable for other classes of organic pollutants such as polychlorinated biphenyls and polybrominated diphenyl ethers. Figure SERS detection of polycyclic aromatic hydrocarbons facilitated via partition layer modified substrates.

Environmental metabolomics: new insights into earthworm ecotoxicity and contaminant bioavailability in soil

Environmental metabolomics is a growing and emerging sub-discipline of metabolomics. Studies with earthworms have progressed from the initial stages of simple contact exposure tests to detailed studies of earthworm responses in soil. Over the past decade, a variety of endogenous metabolites have been identified as potential biomarkers of contaminant exposure. Furthermore, metabolomic methods have delineated responses from sub-lethal exposure of earthworms to polycyclic aromatic hydrocarbons and metals in soil suggesting that environmental metabolomics may be used as a direct measure of contaminant bioavailability in soil. Environmental metabolomics has the potential to fill knowledge gaps related to earthworm toxicity and contaminant bioavailability. However, challenges with metabolite quantification and limited systems-level models of metabolic data require improvement before detailed models of “normal” responses can be developed and used routinely in assessment of contaminated sites. Nonetheless, environmental metabolomics is poised to improve our fundamental understanding of earthworm responses and toxicity to contaminants in soil. Figure Principal component analysis (PCA) scores plots of earthworm metabolic profiles measured by ¹H NMR spectroscopy after exposure to sub-lethal concentrations of phenanthrene in soil.

Biosensing applications of clay-modified electrodes: a review

Two-dimensional layered inorganic solids, such as cationic clays and layered double hydroxides (LDHs), also defined as anionic clays, have open structures which are favourable for interactions with enzymes and which intercalate redox mediators. This review aims to show the interest in clays and LDHs as suitable host matrices likely to immobilize enzymes onto electrode surfaces for biosensing applications. It is meant to provide an overview of the various types of electrochemical biosensors that have been developed with these 2D layered materials, along with significant advances over the last several years. The different biosensor configurations and their specific transduction procedures are discussed.      

Magnetic microbead-based electrochemical immunoassays

This review provides a summary of recent works concerning electrochemical immunoassays using magnetic microbeads as a solid phase. Recent research activity has led to innovative and powerful detection strategies that have been resulted in sensitive electrochemical detection. Coupling of magnetic microbeads with highly sensitive electrochemical detection provides a useful analytical method for environmental evaluation and clinical diagnostics, etc. The huge surface area and high dispersion capability of magnetic microbeads strongly contributes towards the development of new sensitive, rapid, user-friendly, and miniaturized electrochemical immunoassay systems. Moreover, the immunocomplexes formed on the magnetic microbead surface can be easily detected without pretreatment steps such as preconcentration or purification, which are normally required for standard methods. The discussion in this review is organized in two main subjects that include magnetic-microbead-based assays using enzyme labels and nanoparticle tags. Figure SEM image of Dynabeads M-280 (12% γ-Fe₂O₃ in polystyrene, diameter is 2.8 μm)

Capillary-assembled microchip as an on-line deproteinization device for capillary electrophoresis

A capillary-assembled microchip (CAs-CHIP), prepared by simply embedding square capillaries in a lattice polydimethylsiloxane (PDMS) channel plate with the same channel dimensions as the outer dimensions of the square capillaries, has been used as a diffusion-based pretreatment attachment in capillary electrophoresis (CE). Because the CAs-CHIPs employ square-section channels, diffusion-based separation of small molecules from sample solutions containing proteins is possible by using the multilayer flow formed in the square section channel. When a solution containing high-molecular-weight and low-molecular-weight species makes contact with a buffer solution, the low-molecular-weight species, which have larger diffusion coefficients than the high-molecular-weight species, can be collected in a buffer-solution phase. The collected solution containing the low-molecular-weight species is introduced into the separation capillary to be analyzed by CE. This type of system can be used for CE analysis in which pretreatment is required to remove proteins. In this work a fluorescently labeled protein and rhodamine-based molecules were chosen as model species and a feasibility study was performed.      

Monitoring of vesicular exocytosis from single cells using micrometer and nanometer-sized electrochemical sensors

Communication between cells by release of specific chemical messengers via exocytosis plays crucial roles in biological process. Electrochemical detection based on ultramicroelectrodes (UMEs) has become one of the most powerful techniques in real-time monitoring of an extremely small number of released molecules during very short time scales, owing to its intrinsic advantages such as fast response, excellent sensitivity, and high spatiotemporal resolution. Great successes have been achieved in the use of UME methods to obtain quantitative and kinetic information about released chemical messengers and to reveal the molecular mechanism in vesicular exocytosis. In this paper, we review recent developments in monitoring exocytosis by use of UMEs-electrochemical-based techniques including electrochemical detection using micrometer and nanometer-sized sensors, scanning electrochemical microscopy (SECM), and UMEs implemented in lab-on-a-chip (LOC) microsystems. These advances are of great significance in obtaining a better understanding of vesicular exocytosis and chemical communications between cells, and will facilitate developments in many fields, including analytical chemistry, biological science, and medicine. Furthermore, future developments in electrochemical probing of exocytosis are also proposed. Figure In this paper, we review recent developments in monitoring the exocytosis by use of UMEs-electrochemical-based techniques including electrochemical detection using micrometer and nanometer-sized sensors, Scanning Electrochemical Microscopy (SECM) and UMEs implemented in lab-on-a-chip (LOC) microsystems. These advances are of great significance in obtaining a better understanding of vesicular exocytosis and chemical communications between cells, and will facilitate developments in many fields including analytical chemistry, biological science and medicine. Furthermore, future developments in electrochemical probing of exocytosis are proposed.

Label-free detection of the aptamer binding on protein patterns using Kelvin probe force microscopy (KPFM)

Anti-lysozyme aptamers are found to preferentially bind to the edge of a tightly packed lysozyme pattern. Such edge-binding is due to the better accessibility and flexibility of the edge lysozyme molecules. Kelvin probe force microscopy (KPFM) was used to study the aptamer–lysozyme binding. Our results show that KPFM is capable of detecting the aptamer–protein binding down to the 30 nm scale. The surface potential of the aptamer–lysozyme complex is approximately 12 mV lower than that of the lysozyme. The surface potential images of the aptamer-bound lysozyme patterns have the characteristic shoulder steps around the pattern edge, which is much wider than that of a clean lysozyme pattern. These results demonstrate the potentials of KPFM as a label-free method for the detection of protein–DNA interactions. Figure Aptamers preferentially bind on the edge of a protein pattern as revealed by Kelvin force microscopy.

Interpretation of laser desorption mass spectra of unexpected inorganic species found in a cosmetic sample of forensic interest: fingernail polish

Monitoring of cell cultures in microbioreactors is a crucial task in cell bioassays and toxicological tests. In this work a novel tool based on a miniaturized sensor array fabricated using low-temperature cofired ceramics (LTCC) technology is presented. The developed device is applied to the monitoring of cell-culture media change, detection of the growth of various species, and in toxicological studies performed with the use of cells. Noninvasive monitoring performed with the LTCC microelectrode array can be applied for future cell-engineering purposes. Figure Microelectrode array for monitoring of cell cultures     

Bio-inspired colorimetric detection of Hg<Superscript>2+</Superscript> and Pb<Superscript>2+</Superscript> heavy metal ions using Au nanoparticles

Heavy metal ions are highly toxic species which can cause long-term damage to biological systems. These species are known to disrupt biological events at the cellular level, cause significant oxidative damage, and are carcinogens. The production of simple, in-field detection methods that are highly sensitive for these cations is highly desirable in response to global pollution. In that regard, bio-inspired colorimetric sensing systems have been developed to detect Hg²⁺ and Pb²⁺, and other cations, down to nmol L⁻¹ concentrations. The benefits of these systems, which are reviewed herein, include cost-effective production, facile usage, and a visual color change for the detection method. Such advantages are significant positive steps for heavy metal ion detection, especially in regions where sophisticated laboratory studies are prohibited. Figure Biological-based colorimetric detection of heavy metal cations. The materials on the left are independent Au nanoparticles in solution, functionalized with heavy metal binding biomolecules, which, upon metal addition, aggregate to evolve a detectable solution color change.

Critical evaluation of sample pretreatment techniques

Sample preparation before chromatographic separation is the most time-consuming and error-prone part of the analytical procedure. Therefore, selecting and optimizing an appropriate sample preparation scheme is a key factor in the final success of the analysis, and the judicious choice of an appropriate procedure greatly influences the reliability and accuracy of a given analysis. The main objective of this review is to critically evaluate the applicability, disadvantages, and advantages of various sample preparation techniques. Particular emphasis is placed on extraction techniques suitable for both liquid and solid samples. Figure Miniaturised extraction techniques allow sensitive analysis of also small sample volumes.     

Critical evaluation of novel dynamic flow-through methods for automatic sequential BCR extraction of trace metals in fly ash

Two novel dynamic extraction approaches, the so-called sequential injection microcolumn extraction and sequential injection stirred-flow chamber extraction, based on the implementation of a sample-containing container as an external extraction reactor in a sequential injection network, are for the first time, optimized and critically appraised for fractionation assays. The three steps of the original Community Bureau of Reference (BCR) sequential extraction scheme have been performed in both automated dynamic fractionation systems to evaluate the extractability of Cr, Cu, Ni, Pb, and Zn in a standard reference material of coal fly ash (NIST 1633b). In order to find the experimental conditions with the greatest influence on metal leachability in dynamic BCR fractionation, a full-factorial design was applied, in which the solid sample weight (100–500 mg) and the extraction flow rate (3.0–6.0 mL min⁻¹) were selected as experimental factors. Identical cumulative extractabilities were found in both sequential injection (SI)-based methods for most of assayed trace elements regardless of the extraction conditions selected, revealing that both dynamic fractionation systems, as opposed to conventional steady-state BCR extraction, are not operationally defined within the selected range of experimental conditions. Besides, the proposed automated SI assemblies offer a significant saving of operational time with respect to classical BCR test, that is, 3.3 h versus 48 h, for complete fractionation with minimum analyst involvement. Schematic illustration of automatic flow-based setups for dynamic fractionation of trace metals in fly ash

The effects of microbial degradation on ignitable liquids

The identification of ignitable liquid residues in fire debris is a key finding for determining the cause and origin of a suspicious fire. However, the complex mixtures of organic compounds that comprise ignitable liquids are susceptible to microbiological attack following collection of the sample. Biodegradation can result in selective removal of many of the compounds required for identification of an ignitable liquid. Such degradation has been found to occur rapidly in substrates such as soil, rotting wood, or other organic matter. Furthermore, fire debris evidence must often be stored for extended periods at room temperature prior to analysis due to case backlogs and available evidence storage. Hence, extensive damage to ignitable liquid residues by microbes poses a significant threat to subsequent laboratory work. In this work, the effects of microbial degradation of ignitable liquids in soil have been evaluated as a function of time. Key findings include the loss of n-alkanes, particularly C₉–C₁₆, which showed the most dramatic decrease in gasoline as well as the petroleum distillates, while branched alkanes remained unchanged. Monosubstituted benzenes also showed the most dramatic loss in gasoline. In the heavy petroleum distillates, n-alkanes with even carbon numbers were degraded more than n-alkanes with odd carbon numbers. Figure A “fully involved” house fire in Indianapolis, IN

Two-dimensional liquid chromatography of synthetic polymers

Two-dimensional liquid chromatography, 2D-LC of synthetic polymers is critically assessed. Similarities and differences of 2D-LC of low-molecular-mass and polymeric substances are reviewed. The rationale of application of 2D-LC to macromolecular substances is discussed. Basic information on retention mechanisms in liquid chromatography of synthetic polymers is furnished. The principles, reasons, and significance of coupling of retention mechanisms are explained. The resulting separation processes are elucidated, and the technical concepts of the corresponding experimental arrangements are described. The benefits of 2D-LC are demonstrated together with numerous problems and shortcomings of the method.      

Compatibility of quantum dots with immunobuffers, and its effect on signal/background of quantum dot-based immunoassay

In this work, the compatibility of quantum dots (QDs) with immunobuffers was studied by investigating the fluorescence stability of QDs in immunobuffers (in this research immunobuffers were defined as buffers for immunoaffinity binding or separation). Experimentally, the fluorescence signals of QDs with different surface chemistries (amine-terminated, streptavidin-coated, or antibody-conjugated) in commonly used immunobuffers were monitored versus time. The effect of some buffer composition on the compatibility of QDs with these buffers was also explored. Based on experimental data, the QD compatibility with these buffers is summarized, and it is found that a trace amount of bovine serum albumin added to most of these buffers helps QDs to achieve compatibility with them. Moreover, with QD as fluorescence label and C-reactive protein as a model analyte, a magnetic bead-based assay was performed using compatible and incompatible QD–immunobuffer systems. It is shown that compatible QD–immunobuffer systems can be used to achieve a higher assay signal/background ratio.