Synchronization of Kuramoto oscillators in random complex networks

We study the synchronization of coupled phase oscillators in random complex networks. The topology of the networks is assumed to be vary over time. Here we mainly study the onset of global phase synchronization when the topology switches rapidly over time. We find that the results are, to some extent, different from those in deterministic situations. In particular, the synchronizability of coupled oscillators can be enhanced in ER networks and scale-free networks under fast switching, while in stochastic small-world networks such enhancement is not significant.     

Optimal paths in disordered complex networks

We study the optimal distance in networks, l(opt), defined as the length of the path minimizing the total weight, in the presence of disorder. Disorder is introduced by assigning random weights to the links or nodes. For strong disorder, where the maximal weight along the path dominates the sum, we find that l(opt) approximately N(1/3) in both Erdos-Rényi (ER) and Watts-Strogatz (WS) networks. For scale-free (SF) networks, with degree distribution P(k) approximately k(-lambda), we find that l(opt) scales as N((lambda-3)/(lambda-1)) for 3 or =4. Thus, for these networks, the small-world nature is destroyed. For 2相似文献   

Inference and phase transitions in the detection of modules in sparse networks

We present an asymptotically exact analysis of the problem of detecting communities in sparse random networks generated by stochastic block models. Using the cavity method of statistical physics and its relationship to belief propagation, we unveil a phase transition from a regime where we can infer the correct group assignments of the nodes to one where these groups are undetectable. Our approach yields an optimal inference algorithm for detecting modules, including both assortative and disassortative functional modules, assessing their significance, and learning the parameters of the underlying block model. Our algorithm is scalable and applicable to real-world networks, as long as they are well described by the block model.     

度关联无标度网络上的有倾向随机行走

有倾向随机行走是研究网络上数据包路由策略的有效方法. 由于许多真实技术网络包括互联网都具有负的度关联特征, 因此本文研究这种网络上的有倾向随机行走性质. 研究表明: 在负关联网络上粒子可以在连接度较大的节点上均匀分布, 而连接度小的节点上粒子较少; 负关联网络上随机行走的速度比非关联网络更快; 找到了负关联网络上的最佳倾向性系数, 在此情况下负关联网络上随机行走的速度远快于非关联网络. 负关联网络既可以利用度小的节点容纳粒子, 又可以利用度大的节点快速传输, 这是负关联网络上高行走效率产生的机制.     

Detecting and describing the modular structures of weighted networks

In the functional properties of complex networks, modules play a central role. In this paper, we propose a new method to detect and describe the modular structures of weighted networks. In order to test the proposed method, as an example, we use our method to analyse the structural properties of the Chinese railway network. Here, the stations are regarded as the nodes and the track sections are regarded as the links. Rigorous analysis of the existing data shows that using the proposed algorithm, the nodes of network can be classified naturally. Moreover, there are several core nodes in each module. Remarkably, we introduce the correlation function $G_{rs}$, and use it to distinguish the different modules in weighted networks.     

确定度分布条件下可变同配系数的算法构造与影响分析

复杂网络是现实中大量节点和边的抽象拓扑, 如何揭示网络内部拓扑对网络连通性、脆弱性等特征的影响是当前研究的热点. 本文在确定度分布的条件下, 根据Newman提出的同配系数的定义分析其影响因素. 首先在可变同配系数下分别提出了基于度分布的确定算法和基于概率分布的不确定算法, 并分别在三种不同类型的网络(Erdös-Rényi网络, Barabási-Albert网络, Email真实网络)中验证. 实验结果表明: 当网络规模达到一定程度时, 确定算法优于贪婪算法. 以此为基础, 分析了同配系数改变时聚类系数的变化, 发现两者之间存在关联性, 并从网络的微观结构变化中揭示了聚类系数变化的原因.     

Projective-anticipating, projective, and projective-lag synchronization of time-delayed chaotic systems on random networks

We study projective-anticipating, projective, and projective-lag synchronization of time-delayed chaotic systems on random networks. We relax some limitations of previous work, where projective-anticipating and projective-lag synchronization can be achieved only on two coupled chaotic systems. In this paper, we realize projective-anticipating and projective-lag synchronization on complex dynamical networks composed of a large number of interconnected components. At the same time, although previous work studied projective synchronization on complex dynamical networks, the dynamics of the nodes are coupled partially linear chaotic systems. In this paper, the dynamics of the nodes of the complex networks are time-delayed chaotic systems without the limitation of the partial linearity. Based on the Lyapunov stability theory, we suggest a generic method to achieve the projective-anticipating, projective, and projective-lag synchronization of time-delayed chaotic systems on random dynamical networks, and we find both its existence and sufficient stability conditions. The validity of the proposed method is demonstrated and verified by examining specific examples using Ikeda and Mackey-Glass systems on Erdos-Renyi networks.     

相依网络上基于相连边的择优恢复算法

如何有效地应对和控制故障在相依网络上的级联扩散避免系统发生结构性破碎,对于相依网络抗毁性研究具有十分重要的理论价值和现实意义.最新的研究提出一种基于相依网络的恢复模型,该模型的基本思想是通过定义共同边界节点,在每轮恢复阶段找出符合条件的共同边界节点并以一定比例实施恢复.当前的做法是按照随机概率进行选择.这种方法虽然简单直观,却没有考虑现实世界中资源成本的有限性和择优恢复的必然性.为此,针对相依网络的恢复模型,本文利用共同边界节点在极大连通网络内外的连接边数计算边界节点的重要性,提出一种基于相连边的择优恢复算法(preferential recovery based on connectivity link,PRCL)算法.利用渗流理论的随机故障模型,通过ER随机网络和无标度网络构建的不同结构相依网络上的级联仿真结果表明,相比随机方法和度数优先以及局域影响力优先的恢复算法,PRCL算法具备恢复能力强、起效时间早且迭代步数少的优势,能够更有效、更及时地遏制故障在网络间的级联扩散,极大地提高了相依网络遭受随机故障时的恢复能力.     

Comparison of methods for the detection of node group membership in bipartite networks

Most real-world networks considered in the literature have a modular structure. Analysis of these real-world networks often are performed under the assumption that there is only one type of node. However, social and biochemical systems are often bipartite networks, meaning that there are two exclusive sets of nodes, and that edges run exclusively between nodes belonging to different sets. Here we address the issue of module detection in bipartite networks by comparing the performance of two classes of group identification methods – modularity maximization and clique percolation – on an ensemble of modular random bipartite networks. We find that the modularity maximization methods are able to reliably detect the modular bipartite structure, and that, under some conditions, the simulated annealing method outperforms the spectral decomposition method. We also find that the clique percolation methods are not capable of reliably detecting the modular bipartite structure of the bipartite model networks considered.     

False Positive and False Negative Effects on Network Attacks

Robustness against attacks serves as evidence for complex network structures and failure mechanisms that lie behind them. Most often, due to detection capability limitation or good disguises, attacks on networks are subject to false positives and false negatives, meaning that functional nodes may be falsely regarded as compromised by the attacker and vice versa. In this work, we initiate a study of false positive/negative effects on network robustness against three fundamental types of attack strategies, namely, random attacks (RA), localized attacks (LA), and targeted attack (TA). By developing a general mathematical framework based upon the percolation model, we investigate analytically and by numerical simulations of attack robustness with false positive/negative rate (FPR/FNR) on three benchmark models including Erd?s-Rényi (ER) networks, random regular (RR) networks, and scale-free (SF) networks. We show that ER networks are equivalently robust against RA and LA only when FPR equals zero or the initial network is intact. We find several interesting crossovers in RR and SF networks when FPR is taken into consideration. By defining the cost of attack, we observe diminishing marginal attack efficiency for RA, LA, and TA. Our finding highlights the potential risk of underestimating or ignoring FPR in understanding attack robustness. The results may provide insights into ways of enhancing robustness of network architecture and improve the level of protection of critical infrastructures.     

Dynamical robustness analysis of weighted complex networks

Robustness of weighted complex networks is analyzed from nonlinear dynamical point of view and with focus on different roles of high-degree and low-degree nodes. We find that the phenomenon for the low-degree nodes being the key nodes in the heterogeneous networks only appears in weakly weighted networks and for weak coupling. For all other parameters, the heterogeneous networks are always highly vulnerable to the failure of high-degree nodes; this point is the same as in the structural robustness analysis. We also find that with random inactivation, heterogeneous networks are always more robust than the corresponding homogeneous networks with the same average degree except for one special parameter. Thus our findings give an integrated picture for the dynamical robustness analysis on complex networks.     

A brief study on coevolution of Ising dynamics

Community structure appears to be an intrinsic property of many complex real-world networks. However, recent work shows that real-world networks reveal even more sophisticated modules than classical cohesive (link-density) communities. In particular, networks can also be naturally partitioned according to similar patterns of connectedness among the nodes, revealing link-pattern communities. We here propose a propagation based algorithm that can extract both link-density and link-pattern communities, without any prior knowledge of the true structure. The algorithm was first validated on different classes of synthetic benchmark networks with community structure, and also on random networks. We have further applied the algorithm to different social, information, technological and biological networks, where it indeed reveals meaningful (composites of) link-density and link-pattern communities. The results thus seem to imply that, similarly as link-density counterparts, link-pattern communities appear ubiquitous in nature and design.     

随机矩阵理论在肺癌基因网络识别中的应用

利用随机矩阵理论（RMT）方法除去肺癌基因表达数据中的噪声,并将去噪后的数据分别用模块方法和等级聚类方法进行处理.比较两种方法处理后的结果,发现RMT-等级聚类方法不仅能给出模块,还能给出模块间的关联强度.研究表明,RMT-等级聚类方法是一种有效的识别基因网络的新方法. 关键词： 随机矩阵理论 等级聚类 基因网络 肺癌     

A Robustness Model of Complex Networks with Tunable Attack Information Parameter

We introduce a novel model for robustness of complex with a tunable attack information parameter. The random failure and intentional attack known are the two extreme cases of our model. Based on the model, we study the robustness of complex networks under random information and preferential information, respectively. Using the generating function method, we derive the exact value of the critical removal fraction of nodes for the disintegration of networks and the size of the giant component. We show that hiding just a small fraction of nodes randomly can prevent a scale-free network from collapsing and detecting just a small fraction of nodes preferentially can destroy a scale-free network.     

Soliton propagation and collision in a variable-coefficient coupled Korteweg-de Vries equation

In complex networks it is common to model a network or generate a surrogate network based on the conservation of the number of connections of individual nodes. In this paper we analyse the ensemble of random networks that are defined by the conservation of the rich-club coefficient, which measures the density of connections among a group of nodes. We also present a method to generate such surrogate networks for a given network. We show that by choosing a suitable local linking term, the random networks not only preserve the rich-club coefficient but also closely approximate the degree distribution and the mixing pattern of real networks. Our work provides a different and complementary perspective to the network randomisation problem.     

Network Entropy Based on Topology Configuration and Its Computation to Random Networks

A definition of network entropy is presented, and as an example, the relationship between the value of network entropy of ER network model and the connect probability p as well as the total nodes N is discussed. The theoretical result and the simulation result based on the network entropy of the ER network are in agreement well with each other. The result indicated that different from the other network entropy reported before, the network entropy defined here has an obvious difference from different type of random networks or networks having different total nodes. Thus, this network entropy may portray the characters of complex networks better. It is also pointed out that, with the aid of network entropy defined, the concept of equilibrium networks and the concept of non-equilibrium networks may be introduced, and a quantitative measurement to describe the deviation to equilibrium state of a complex network is carried out.     

多层单向耦合星形网络的特征值谱及同步能力分析

随着复杂网络同步的进一步发展,对复杂网络的研究重点由单层网络转向更加接近实际网络的多层有向网络.本文分别严格推导出三层、多层的单向耦合星形网络的特征值谱,并分析了耦合强度、节点数、层数对网络同步能力的影响,重点分析了层数和层间中心节点之间的耦合强度对多层单向耦合星形网络同步能力的影响,得出了层数对多层网络同步能力的影响至关重要.当同步域无界时,网络的同步能力与耦合强度、层数有关,同步能力随其增大而增强;当同步域有界时,对于叶子节点向中心节点耦合的多层星形网络,当层内耦合强度较弱时,层内耦合强度的增大会使同步能力增强,而层间叶子节点之间的耦合强度、层数的增大反而会使同步能力减弱;当层间中心节点之间的耦合强度较弱时,层间中心节点之间的耦合强度、层数的增大会使同步能力增强,层内耦合强度、层间叶子节点之间的耦合强度的增大反而会使同步能力减弱.对于中心节点向叶子节点耦合的多层星形网络,层间叶子节点之间的耦合强度、层数的增大会使同步能力增强,层内耦合强度、节点数、层间中心节点之间的耦合强度的增大反而会使同步能力减弱.     

Response of boolean networks to perturbations

We evaluate the probability that a Boolean network returns to an attractor after perturbing h nodes. We find that the return probability as function of h can display a variety of different behaviours, which yields insights into the state-space structure. In addition to performing computer simulations, we derive analytical results for several types of Boolean networks, in particular for Random Boolean Networks. We also apply our method to networks that have been evolved for robustness to small perturbations, and to a biological example.     

A self-organizing shortest path finding strategy on complex networks

The shortcomings of traditional methods to find the shortest path are revealed, and a strategy of finding the self-organizing shortest path based on thermal flux diffusion on complex networks is presented. In our method, the shortest paths between the source node and the other nodes are found to be self-organized by comparing node temperatures. The computation complexity of the method scales linearly with the number of edges on underlying networks. The effects of the method on several networks, including a regular network proposed by Ravasz and Barabási which is called the RB network, a real network, a random network proposed by Ravasz and Barabási which is called the ER network and a scale-free network, are also demonstrated. Analytic and simulation results show that the method has a higher accuracy and lower computational complexity than the conventional methods.     

Cascading Failures of Complex Networks Based on Two-Step Degree

We propose a new concept, two-step degree. Defining it as the capacity of a node of complex networks, we establish a novel capacity-load model of cascading failures of complex networks where the capacity of nodes decreases during the process of cascading failures. For scale-free networks, we find that the average two-step degree increases with the increase of the heterogeneity of the degree distribution, showing that the average two- step degree can be used for measuring the heterogeneity of the degree distribution of complex networks. In addition, under the condition that the average degree of a node is given, we can design a scale-free network with the optimal robustness to random failures by maximizing the average two-step degree.