Enthalpy Change of Allosteric Transition in Human Haemoglobin A

Oxygen equilibria of haemoglobin were analysed according to a binding isotherm proposed by Amire ( Bull. Chem. Soc. Jpn. 1994, 67, 7 )¹ to obtain the intrinsic oxygen association constants to the molecule. Two sets of binding sites in haemoglobin were identified, which were ascribed to R₂ and T forms of the molecule. The average intrinsic association constants determined as a function of temperature gave a heat of oxygenation of‐76 ± 4 kJ mol^?;1 (tetramer). A microcalorimetrically determined heat of deoxygenation of oxyhaemoglobin by dithionite gave ?267 ± 10 kJ mol^?1 (tetramer). From these results, the heat of allostery of ?234 ± 24 kJ mol^?1 for haemoglobin tetramer was obtained, yielding allosteric energy per salt bridge of‐29 ± 3 kJ. This result suggests that salt‐bridge may, in fact, be thermochemically equivalent to hydrogen bonds.     

Thermochemical investigation of natural antlerite

Thermal and thermochemical investigations of natural hydroxyl-bearing copper sulfate Cu₃SO₄(OH)₄??antlerite have been carried out. The stages of its thermal decomposition have been studied employing the Fourier-transform IR spectroscopy. The enthalpy of formation of antlerite from the elements ??_f H _m ^o (298.15?K)?=?(?1750?±?10)?kJ?mol^?1 has been determined by the method of oxide melt solution calorimetry. Using value of S _m ^o (298.15?K), equal to (263.46?±?0.47)?J?K^?1?mol^?1, obtained earlier by the method of adiabatic calorimetry, the Gibbs energy value of ??_f G _m ^o (298.15?K)?=?(?1467?±?10)?kJ?mol^?1 has been calculated.     

Etude catorimetrique de la decomposition thermique des sels de tetraflouroammonium (NF4)2NiF6 et NF4SbF6

The study of the thermal decomposition of the tetrafluoroammonium salts (NF₄)₂NiF₆ and NF₄SbF₆ by differential scanning calorimetry also gave enthalpies of decomposition for (NF₄)₂NiF₆ and NF₄SbF₆ of 134.7 ± 13.0 kJ mol^?1 and 245.6 ± 28.9 kJ mol^?1 respectively. The corresponding standard enthalpies of formation are found to be ?1033 and ?1649 kJ mol^?1 respectively.     

Exploring antibiotic resistant mechanism by microcalorimetry

In an effort to probe the reaction of antibiotic hydrolysis catalyzed by B3 metallo-??-lactamase (M??L), the thermodynamic parameters of penicillin G hydrolysis catalyzed by M??L L1 from Stenotrophomonas maltophilia were determined by microcalorimetric method. The values of activation free energy ??G _?? ^?? are 88.26, 89.44, 90.49, and 91.57?kJ?mol^?1 at 293.15, 298.15, 303.15, and 308.15?K, respectively, activation enthalpy ??H _?? ^?? is 24.02?kJ?mol^?1, activation entropy ??S _?? ^?? is ?219.2511?J?mol^?1?K^?1, apparent activation energy E is 26.5183?kJ?mol^?1, and the reaction order is 1.0. The thermodynamic parameters reveal that the penicillin G hydrolysis catalyzed by M??L L1 is an exothermic and spontaneous reaction.     

Surface segregation measurements of In and S impurities from a dilute Cu(In,S) ternary alloy

The surface segregation of In and S from a dilute Cu(In,S) ternary alloy were measured using Auger electron spectroscopy coupled with a linear programmed heater. The alloy was linearly heated and cooled at constant rates. Segregation data of a linear heat run showed surface segregation of In that reached a maximum surface coverage of 25% followed by S, which reached a coverage of 30%. It was found that after In had reached a maximum surface coverage, it started to desegregate as soon as the S enriched the surface until In was completely replaced by S. The segregation parameters, namely, the pre‐exponential factor (D₀), activation energy (Q), segregation energy (ΔG?) and interaction energy (Ω) were extracted from the measured segregation data for both In and S segregation in Cu by simulating the measured segregation data with a theoretical segregation model (modified Darken model). The segregation parameters obtained for In segregation in Cu are D₀ = 1.8 ± 0.5 × 10^?5 m² s^?1, Q = 184.3 ± 1.0 kJ.mol^?1, ΔG? = ?61.4 ± 1.4 kJ.mol^‐1, Ω_Cu?In = 3.0 ± 0.4 kJ.mol^?1; for S segregation in Cu the parameters are D₀ = 8.9 ± 0.5 × 10^?3 m² s^?1, Q = 212.8 ± 3.0 kJ.mol^?1, ΔG? = ?120.0 ± 3.5 kJ.mol^?1, Ω_Cu?S = 23.0 ± 2.0 kJ mol^?1 and the In and S interaction parameter is Ω_In?S = ?4.0 ± 0.5 kJ.mol^?1. The initial parameters used for the Darken calculations were extracted from fits performed with the Fick's and Guttmann model. Copyright © 2013 John Wiley & Sons, Ltd.     

Mechanistic Aspects of Ligand Substitution on the Hydroxopentaaquarhodium(III) Ion in Aqueous Solution by Sulfur‐Containing Bioactive Ligands

The kinetics of the interactions between three sulfur‐containing ligands, thioglycolic acid, 2‐thiouracil, glutathione, and the title complex, have been studied spectrophotometrically in aqueous medium as a function of the concentrations of the ligands, temperature, and pH at constant ionic strength. The reactions follow a two‐step process in which the first step is ligand‐dependent and the second step is ligand‐independent chelation. Rate constants (k₁ ～10^?3 s^?1 and k₂ ～10^?5 s^?1) and activation parameters (for thioglycolic acid: ΔH₁^≠ = 22.4 ± 3.0 kJ mol^?1, ΔS₁^≠ = ?220 ± 11 J K^?1 mol^?1, ΔH₂^≠ = 38.5 ± 1.3 kJ mol^?1, ΔS₂^≠ = ?204 ± 4 J K^?1 mol^?1; for 2‐thiouracil: ΔH₁^≠ = 42.2 ± 2.0 kJ mol^?1, ΔS₁^≠ = ?169 ± 6 J K^?1 mol^?1, ΔH₂^≠ = 66.1 ± 0.5 kJ mol^?1, ΔS₂^≠ = ?124 ± 2 J K^?1 mol^?1; for glutathione: ΔH₁^≠ = 47.2 ± 1.7 kJ mol^?1, ΔS₁^≠ = ?155 ± 5 J K^?1mol^?1, ΔH₂^≠ = 73.5 ± 1.1 kJ mol^?1, ΔS₂^≠ = ?105 ± 3 J K^?1 mol^?1) were calculated. Based on the kinetic and activation parameters, an associative interchange mechanism is proposed for the interaction processes. The products of the reactions have been characterized from IR and ESI mass spectroscopic analysis. A rate law involving the outer sphere association complex formation has been established as      

The retro-aldol mechanism in the pyrolysis kinetics of primary,secondary, and tertiary β-hydroxy ketones in the gas phase

The pyrolysis kinetics of primary, secondary, and tertiary β-hydroxy ketones have been studied in static seasoned vessels over the pressure range of 21–152 torr and the temperature range of 190°–260°C. These eliminations are homogeneous, unimolecular, and follow a first-order rate law. The rate coefficients are expressed by the following equations: for 1-hydroxy-3-butanone, log k₁(s^?1) = (12.18 ± 0.39) ? (150.0 ± 3.9) kJ mol^?1 (2.303RT)^?1; for 4-hydroxy-2-pentanone, log k₁(s^?1) = (11.64 ± 0.28) ? (142.1 ± 2.7) kJ mol^?1 (2.303RT)^?1; and for 4-hydroxy-4-methyl-2-pentanone, log k₁(s^?1) = (11.36 ± 0.52) ? (133.4 ± 4.9) kJ mol^?1 (2.303RT)^?1. The acid nature of the hydroxyl hydrogen is not determinant in rate enhancement, but important in assistance during elimination. However, methyl substitution at the hydroxyl carbon causes a small but significant increase in rates and, thus, appears to be the limiting factor in a retroaldol type of mechanism in these decompositions. © John Wiley & Sons, Inc.     

Synthesis,structure, and kinetic studies on [RuCl2(NCCH3)2(cod)]

[RuCl₂(NCCH₃)₂(cod)], an alternative starting material to [RuCl₂(cod)] _n for the preparation of ruthenium(II) complexes, has been prepared from the polymer compound and isolated in yields up to 87% using a new work-up procedure. The compound has been obtained as a yellow solid without water of crystallization. The complexes [RuCl₂(NCR)₂(cod)] spontaneously transform into dimers [Ru₂Cl(μ-Cl)₃(cod)₂(NCR)] (R?=?Me, Ph). ¹H NMR kinetic experiments for these transformations evidenced first-order behavior. [RuCl₂(NCPh)₂(cod)] dimerizes slower by a factor of ten than [RuCl₂(NCCH₃)₂(cod)]. The following activation parameters, ΔH ^#?=?114?±?3?kJ?mol^?1 and ΔS ^#?=?66?±?9?J?K^?1?mol^?1 for R?=?CH₃CN (ΔG ^#?=?94?±?5?kJ?mol^?1, 298.15?K) and ΔH ^#?=?122?±?2?kJ?mol^?1 and ΔS ^#?=?75?±?6?J?K^?1?mol^?1 for R?=?Ph (ΔG ^#?=?100?±?4?kJ?mol^?1, 298.15?K), have been calculated from the first-order rate constants in the temperature range 294–323?K. The kinetic parameters are in agreement with a two-step mechanism with dissociation of acetonitrile as the rate-determining step. The molecular structures of [Ru₂Cl(μ-Cl)₃(cod)₂(NCR)] (R?=?Me, Ph) have been determined by X-ray diffraction.     

The influence of reagents solvation on enthalpy change of glycine-ion protonation and silver(I) glycine-ion complexation in aqueous-dimethylsulfoxide solutions

The thermal decomposition process and non-isothermal decomposition kinetic of glyphosate were studied by the Differential thermal analysis (DTA) and Thermogravimetric analysis (TGA). The results showed that the thermal decomposition temperature of glyphosate was above 198?°C. And the decomposition process was divided into three stages: The zero stage is the decomposition of impurities, and the mass loss in the first and second stage may be methylene and carbonyl, respectively. The mechanism function and kinetic parameters of non-isothermal decomposition of glyphosate were obtained from the analysis of DTA?CTG curves by the methods of Kissinger, Flynn?CWall?COzawa, Distributed activation energy model, Doyle and ?atava-?esták, respectively. In the first stage, the kinetic equation of glyphosate decomposition obtained showed that the decomposition reaction is a Valensi equation of which is two-dimensional diffusion, 2D. Its activation energy and pre-exponential factor were obtained to be 201.10?kJ?mol^?1 and 1.15?×?10¹⁹?s^?1, respectively. In the second stage, the kinetic equation of glyphosate decomposition obtained showed that the decomposition reaction is a Avrami?CErofeev equation of which is nucleation and growth, and whose reaction order (n) is 4. Its activation energy and pre-exponential factor were obtained to be 251.11?kJ?mol^?1 and 1.48?×?10²¹?s^?1, respectively. Moreover, the results of thermodynamical analysis showed that enthalpy change of ??H ^??, entropy change of ??S ^?? and the change of Gibbs free energy of ??G ^?? were, respectively, 196.80?kJ?mol^?1,107.03?J?mol^?1?K^?1, and 141.77?kJ?mol^?1 in the first stage of the process of thermal decomposition; and 246.26?kJ?mol^?1,146.43?J?mol^?1?K^?1, and 160.82?kJ?mol^?1 in the second stage.     

Enthalpy and entropy of activation and the heat effect of the ene reaction between 4-phenyl-1,2,4-triazoline-3,5-dione and 2,3-dimethyl-2-butene in solution

The rate of the fastest ene reaction between 4-phenyl-1,2,4-triazoline-3,5-dione (1) and 2,3-dimethyl-2-butene (2) is studied by means of stopped flow in solutions of benzene (k ₂ = 55.6 ± 0.5 and 90.5 ± 1.3 L mol^?1 s^?1 at 23.3 and 40°C) and 1,2-dichloroethane (335 ± 9 L mol^?1 s^?1 at 23.5°C). The enthalpy of reaction (?139.2 ± 0.6 kJ/mol in toluene and ?150.2 ± 1.4 kJ/mol in 1,2-dichloroethane) and the enthalpy (20.0 ± 0.5 kJ/mol) and entropy (144 ± 2 J mol^?1 K^?1) of activation are determined. A clear correlation is observed between the reaction rate and ionization potential in a series of ene reactions of 4-phenyl-1,2,4-tri-azoline-3,5-dione with acyclic alkenes.     

Steric and electronic contributions to barriers of internal rotation in 1,8-dibenzoylnaphthalenes

Restricted rotation about the naphthalenylcarbonyl bonds in the title compounds resulted in mixtures of cis and trans rotamers, the equilibrium and the rotational barriers depending on the substituents. For 2,7-dimethyl-1,8-di-(p-toluoyl)-naphthalene (1) ΔH° = 3.66 ± 0.14 kJ mol^?1, ΔS° = 1.67 ± 0.63 J mol^?1 K^?1, ΔH^≠_ct = 55.5 ± 1.3 kJ mol^?1, ΔH^≠_ct = 51.9 ± 1.3 kJ mol^?1, ΔS^≠_ct = ?41.3±4.1 J mol^?1 K^?1 and ΔS^≠_ct = ?42.9±4.1 J mol^?1 K^?1. The rotation about the phenylcarbonyl bond requires ΔH^≠ = ?56.9±4.4 kJ mol^?1 and ΔS^≠ = ?20.5±15.3 J mol^?1 K^?1 for the cis rotamer, and ΔH^≠ = 43.5Δ0.4 kJ mol^?1 and ΔS^≠ =± ?22.4Δ1.3 J mol^?1 K^?1 for the trans rotamer. The role of electronic factors is likely to be virtually the same for both these rotamers but steric interaction between the two phenyl rings occurs in the cis rotamer only. Hence, the difference of the activation enthalpies obtained for the cis and trans rotamers, ΔΔH^?1 = 13.4 kJ mol^?1, provides a basis for the estimation of the role of steric factors in this rotation. For the tetracarboxylic acid 2 and its tetramethyl ester 3 the equilibrium is even more shifted towards the trans form because of enhanced steric and electrostatic interactions between the substituents in the cis form. The barriers for the rotation around the phenylcarbonyl bond and the cis-trans isomerization are lowered; an explanation for this result is presented.     

Alginate polyelectrolyte ionotropic gels. XVIII. Oxidation of alginate polysaccharide by potassium permanganate in alkaline solutions: Kinetics of decomposition of intermediate complex

The kinetics of decomposition of [Alg · Mn ^VIO₄^2?] intermediate complex have been investigated spectrophotometrically at a constant ionic strength of 0.5 mol dm^?3. The decomposition reaction was found to be first-order in the intermediate concentration. The results showed that the rate of reaction was base-catalyzed. The kinetic parameters have been evaluated and found to be ΔS^? = ?103.88±6.18 J mol^?1 K^?1, ΔH^? = 51.61 ± 1.02 kJ mol^?1, and ΔG^? = 82.57 ± 2.86 kJ mol^?1, respectively. A reaction mechanism consistent with the results is discussed. © 1993 John Wiley & Sons, Inc.     

The elimination kinetics of secondary Alkyl Bromides in the gas phase

Elimination kinetics of 2-bromohexane and 2-bromo-4-methylpentane in the gas phase were examined over the temperature range of 310–360°C and pressure range of 46–213 torr. The reactionsin seasoned, static reaction vessels, and in the presence of the free radical inhibitor cyclohexene, are homogeneous, unimolecular, and follow first order rate laws. The overall rate coefficients are described by the following Arrhenius equations: For 2-bromohexane, log??₁(s^?1) = (13.08 ± 0.70) ? (185.7 ± 8.2) kJ mol^?1 (2.303RT)^?1; for 2-bromo-4-methylpentane, log??₁(s^?1) = (13.08 ± 0.33) ? (183.4 ± 3.8) kJ mol^?1 (2.303RT)^?1. The electron releasing effect of alkyl groups influences the overall elimination rates. The olefin products isomerize in the presence of HBr gas until an equilibrium mixture is reached.     

Mass spectrometric study on 2-amino-as-triazino[6,5-c]quinoline and some of its derivatives

Electron impact induced fragmentations of 2-amino-as-triazino[6,5-c]quinoline and its 2-methylamino, 2-dimethylamino and 2-benzylamino analogues have been investigated. The main primary decomposition route of both the singly and the doubly charged molecular ions is the N₂ loss. For the singly charged ions the critical energy of this reaction is 110±10 kJ mol^?1 and the kinetic energy release is 61±4 kJ mol^?1. For the doubly charged ions these values are 90±10 kJ mol^?1 and 5±2 kJ mol^?1, respectively, indicating a significantly different reaction profile. The further fragmentation of [M? N₂]⁺˙ ions consists of radical eliminations from the 2-amino group with cleavages of the α- and β-bonds. Here a significant substituent effect is eliminations found suggesting an intramolecular cyclization reaction with a substituent migration. D and ¹⁵N labelling experiments have shown a minor extent of randomization of the labelled atoms and the occurrence of other hidden skeletal rearrangements during the fragmentation.     

Temperature dependence of the self-decay rate constants of some phenoxyl radicals in aqueous solution

The Arrhenius parameters of the bimolecular rate constants for the decay of several phenoxyl radicals in aqueous solution were measured. The p-halophenoxyl radicals (F, Cl, and Br) decay in a diffusion controlled reaction as the activation energies are the same as that of diffusion of water (16 ± 1.5 kJ · mol^?1). The A factors are 10^{12.2 ± 0.2}. For alkyl and alkoxy substituted phenoxyl, slightly higher activation energies were found (19.5 ? 21.9 kJ · mol^?1). © 1993 John Wiley & Sons, Inc.     

Dynamic proton magnetic resonance studies on complex spin systems. Non-mutual three-spin exchange in N-(trideuteriomethyl)-2-cyanoaziridine

At room temperature and below, the proton NMR spectrum of N-(trideuteriomethyl)-2-cyanoaziridine consists of two superimposed ABC patterns assignable to two N-invertomers; a single time-averaged ABC pattern is observed at 158.9°C. The static parameters extracted from the spectra in the temperature range from –40.3 to 23.2°C and from the high-temperature spectrum permit the calculation of the thermodynamic quantities ΔH⁰ = ?475±20 cal mol^?1 (?1.987 ± 0.084 kJ mol^?1) and ΔS⁰ = 0.43±0.08 cal mol^?1 K^?1 (1.80±0.33 J mol^?1 K^?1) for the cis ? trans equilibrium. Bandshape analysis of the spectra broadened by non-mutual three-spin exchange in the temperature range from 39.4–137.8°C yields the activation parameters ΔH_tc^≠ = 17.52±0.18 kcal mol^?1 (73.30±0.75 kJ mol^?1), ΔS_tc^≠ = ?2.08±0.50 cal mol^?1 K^?1 (?8.70±2.09 J mol^?1 K^?1) and ΔG_tc^≠ (300 K) = 18.14±0.03 kcal mol^?1 (75.90±0.13 kJ mol^?1) for the trans → cis isomerization. An attempt is made to rationalize the observed entropy data in terms of the principles of statistical thermodynamics.     

The elimination kinetics and mechanisms of ethyl piperidine‐3‐carboxylate,ethyl 1‐methylpiperidine‐3‐carboxylate,and ethyl 3‐(piperidin‐1‐yl)propionate in the gas phase

The gas‐phase elimination kinetics of the above‐mentioned compounds were determined in a static reaction system over the temperature range of 369–450.3°C and pressure range of 29–103.5 Torr. The reactions are homogeneous, unimolecular, and obey a first‐order rate law. The rate coefficients are given by the following Arrhenius expressions: ethyl 3‐(piperidin‐1‐yl) propionate, log k₁(s^?1) = (12.79 ± 0.16) ? (199.7 ± 2.0) kJ mol^?1 (2.303 RT)^?1; ethyl 1‐methylpiperidine‐3‐carboxylate, log k₁(s^?1) = (13.07 ± 0.12)–(212.8 ± 1.6) kJ mol^?1 (2.303 RT)^?1; ethyl piperidine‐3‐carboxylate, log k₁(s^?1) = (13.12 ± 0.13) ? (210.4 ± 1.7) kJ mol^?1 (2.303 RT)^?1; and 3‐piperidine carboxylic acid, log k₁(s^?1) = (14.24 ± 0.17) ? (234.4 ± 2.2) kJ mol^?1 (2.303 RT)^?1. The first step of decomposition of these esters is the formation of the corresponding carboxylic acids and ethylene through a concerted six‐membered cyclic transition state type of mechanism. The intermediate β‐amino acids decarboxylate as the α‐amino acids but in terms of a semipolar six‐membered cyclic transition state mechanism. © 2005 Wiley Periodicals, Inc. Int J Chem Kinet 38: 106–114, 2006     

Sigmatropic [1,3]-boron shift (permanent allylic rearrangement) in 3-allyl-3-borabicyclo[3.3.1]nonanes

2D ¹H-¹H EXSY NMR spectroscopy show that the free energy of activation ΔG ^≠ in six 3-allyl-3-borabicyclo[3.3.1]nonane derivatives is significantly higher (72–86 kJ mol^?1) than that in typical allylboranes (48–66 kJ mol^?1). For the first member of the series, viz., 3-allyl-3-borabicyclo[3.3.1]nonane, the activation parameters of the permanent allylic rearrangement were also determined (ΔH ^≠ = 82.7±3.4 kJ mol^?1, ΔS ^≠ = ?11.8±10.3 J mol^?1 K^?1, E _A = 85.5±3.4 kJ mol^?1, lnA = 29.2±1.2).     

The mechanism of the retro-Diels-Alder reaction in 4-vinylcyclohexene cation radical

Butadiene cation radicals are produced symmetrically from the ring and side-chain of the vinylcyclohexene cation radical near the onset of the fragmentation. The appearance energies of C₄H₆^+? and C₄H₂D₄^+? from (3,3,6,6-D₄)vinylcyclohex ene were measured as 11.07 ± 0.05 and 11.06 ± 0.06 eV, respectively. This sets the barrier to retro-Diels-Alder decomposition at 1140 kJ mol^?1 above the energy of 1 and 44 kJ mol^?1 above the thermochemical threshold corresponding to C₄H₆^+? + C₄H₆. Topological molecular orbital calculations indicate that this lowest-energy path involves a sequential rupture of the C₃C₄ and C₅C₆ bonds, with a calculated barrier of 211 kJ mol^?1. The second, two-step reaction channel proceeds by subsequent fission of the C₅C₆ and C₃C₄ bonds with a barrier of 299 kJ mol^?1. This channel is found experimentally as a break on the ionization efficiency curve at 12.1 eV. Both the supra-supra and the supra-antara pericyclic reactions go through energy maxima and are therefore forbidden. The supra-supra process is the most favorable route for decomposition from the first excited state, the activation energy being 333 kJ mol^?1. The preference for the two-step mechanism is due to hyperconjugative stabilization of intermediate molecular configurations.     

Kinetics and mechanism of decomposition of intermediate complex during oxidation of pectate polysaccharide by potassium permanganate in alkaline solutions

The kinetics of decomposition of an [Pect·Mn^VIO₄^2?] intermediate complex have been investigated spectrophotometrically at various temperatures of 15–30°C and a constant ionic strength of 0.1 mol dm^?3. The decomposition reaction was found to be first‐order in the intermediate concentration. The results showed that the rate of reaction was base‐catalyzed. The kinetic parameters have been evaluated and found to be ΔS^≠ = ? 190.06 ± 9.84 J mol^?1 K^?1, ΔH^≠ = 19.75 ± 0.57 kJ mol^?1, and ΔG^≠ = 76.39 ± 3.50 kJ mol^?1, respectively. A reaction mechanism consistent with the results is discussed. © 2002 Wiley Periodicals, Inc. Int J Chem Kinet 35: 67–72, 2003