Chirality organization of ferrocenes bearing podand dipeptide chains: synthesis and structural characterization

A variety of ferrocenes bearing podand dipeptide chains have been synthesized to form an ordered structure in both solid and solution states and have been investigated by 1H NMR, FT-IR, CD, and X-ray crystallographic analyses. Conformational enantiomerization through chirality organization was achieved by the intramolecular hydrogen bondings between the podand dipeptide chains. The single-crystal X-ray structure determination of the ferrocene 2 bearing the podand dipeptide chains (-D-Ala-D-Pro-OEt) revealed two C2-symmetric intramolecular hydrogen bondings between CO (Ala) and NH (another Ala) of each podand dipeptide chain to induce the chirality-organized structure. The molecular structures of the ferrocene 1 composed of the podand L-dipeptide chains (-L-Ala-L-Pro-OEt) and 2 are in a good mirror image relationship, indicating that they are conformational enantiomers. An opposite helically ordered molecular arrangement was formed in the crystal packing of 2 as compared with 1. The ferrocene 2 exhibited induced circular dichroism (CD), which appeared at the absorbance of the ferrocene moiety. The mirror image of the CD signals between 1 and 2 was observed, suggesting that the chirality-organized structure via intramolecular hydrogen bondings is present even in solution. The ferrocene 4 bearing the podand dipeptide chains (-Gly-L-Leu-OEt) also showed an ordered structure in the crystal based on two intramolecular hydrogen bondings between CO (Gly) and NH (another Gly) of each podand dipeptide chain, together with intermolecular hydrogen bondings between CO adjacent to the ferrocene unit and NH (neighboring Leu) to create the highly organized self-assembly. A different self-assembly was observed in the crystal of the ferrocene 5 composed of the podand dipeptide chains (-Gly-L-Phe-OEt), wherein each molecule is bonded to two neighboring molecules through two pairs of symmetrical intermolecular hydrogen bonds to form a 14-membered intermolecularly hydrogen-bonded ring. These ordered structures based on the intramolecular hydrogen bondings in the solution state are also confirmed by 1H NMR and FT-IR.     

Induction of gamma-turn-like structure in ferrocene bearing dipeptide chains via conformational control

[structure: see text] A combination of the ferrocene scaffold as a central reverse-turn unit with the dipeptide chains (-L-Pro-L-Ala-NHPy) was demonstrated to induce both inverse gamma-turn-like and antiparallel beta-sheet-like structures. Only the antiparallel beta-sheet-like structure was formed in the ferrocene bearing the heterochiral dipeptide chains (-L-Pro-D-Ala-NHPy), in which highly organized self-assembly was achieved through a network of intermolecular hydrogen bonds.     

Fine-tuning ligand-receptor design for selective molecular recognition of dicarboxylic acids

The host-guest interaction between the hexaaza macrocyclic ligand 3,7,11,18,22,26-hexaazatricyclo[26.2.2.2]tetratriaconta-1(31),13(34),14,16(33),28(32),29-hexaene (P3) and three rigid dicarboxylic acids (isophthalic acid, H2is; phthtalic acid, H2ph; and terephthalic acid, H2te) has been investigated using potentiometric equilibrium methods and NMR spectroscopy including the measurement of intermolecular nuclear Overhauser effects (NOEs) and self-diffusion coefficients (D). Ternary complexes are formed in aqueous solution as a result of hydrogen bond formation and Coulombic interactions between the host and the guest. In the [(H6P3)(is)]4+ complex, those bonding interactions reach a maximum yielding a log K6R of 4.74. Competitive distribution diagrams and total species distribution diagrams are used to illustrate the main features of these systems. In particular, a selectivity of over 89% at p[H] = 5.0 is obtained for the complexation of the is versus the te substrates. The recognition capacity of P3 over dicarboxylic acids (da) is compared to the related hexaaza macrocycle Me2P3 (7,22-dimethyl-3,7,11,18,22,26-hexaazatricyclo[26.2.2.2]tetratriaconta-1(30),13,15,28,31,33-hexaene) that binds da with a lesser strength, and it is not selective. Theoretical calculations performed at molecular dynamics level have also been carried out and point out that the origin of selectivity is mainly due to the capacity of the P3 ligand receptor to adapt to the geometry of the dicarboxylic acid to form relatively strong hydrogen bonds.     

Triphenylamine-based novel PET sensors in selective recognition of dicarboxylic acids

The triphenylamine-based chemosensors 1 and 2 have been designed and synthesized, for the first time, for the selective recognition of dicarboxylic acids. Carboxylic acid binding takes place through charge neutral pyridyl amide receptor sites with concomitant quenching of fluorescence of the triphenylamine moiety. The bindings were examined using ¹H NMR, fluorescence and UV-vis spectroscopic methods. The receptor 1 was found to be selective for glutaric and adipic acids and the macrocycle 2 was specific for 2,2-dimethylmalonic acid.     

Adenine-based receptor for dicarboxylic acids

The adenine-based fluorescent receptor 1 was designed and synthesized for the selective recognition of dicarboxylic acids in CH₃CN. The recognition takes place through the Hoogsteen binding site of adenine with concomitant PET quenching of the anthracene moiety. The carboxylic acid binding to 1 was investigated by ¹H NMR, X-ray, UV-vis, and fluorescence spectroscopic methods. The Hoogsteen (HG) cleft of receptor 1 is found to be selective for glutaric acid.     

Chirality organization of ferrocenes bearing dipeptide chains of heterochiral sequence

[structures: see text] The symmetrical introduction of two dipeptide chains of heterochiral sequence (-L-Ala-D-Pro-NHPy) into the ferrocene scaffold as a central reverse-turn unit was demonstrated to induce both antiparallel beta-sheet-like and type II beta-turn-like structures simultaneously, affording the chirality-organized structure. The ferrocene bearing only one dipeptide chain (-L-Ala-D-Pro-NHPy) exhibited a left-handed helically ordered molecular assembly through a network of intermolecular hydrogen bonds instead of intramolecular hydrogen bonds.     

Synthesis and electrochemical studies of disubstituted ferrocene/dipeptide conjugates with sulfur-containing side chains

A series of 1,1′-disubstituted ferrocenoyl peptides incorporating dipeptide sidearms has been synthesized and studied electrochemically. The target peptides include ferrocene as an electrochemical reporter, sulfur-containing amino acids (l-methionine, S-methyl-l-cysteine, S-trityl-l-cysteine, S-benzhydryl-l-cysteine) as metal binding agents, and amino acids with non-polar side chains (l-alanine, l-valine, l-phenylalanine) as spacers between reporter and metal binding groups. Ferrocene/dipeptide conjugates were prepared using solution phase peptide synthesis methods employing a BOC-protecting group strategy and HBTU- (O-(benzotriazol-1-yl)-N,N,N′,N′-tetramethyluronium hexafluorophosphate) mediated peptide coupling. The electrochemical properties of these 1,1′-substituted ferrocenoyl peptides have been characterized using cyclic voltammetry. All exhibit fully reversible one electron oxidation steps; forward sweep half wave peaks (E_F), reverse sweep half wave peaks (E_R), peak separations (ΔE_P) and half wave potentials (E_1/2) are reported. Finally, towards the goal of utilizing ferrocenoyl peptides to detect heavy metals in solution, the response of these ferrocene/dipeptide conjugates to metal cations (zinc(II), mercury(II), cadmium(II), lead(II), silver(I)) has been examined. Monitoring changes in the potential of the Fe(II)/Fe(III) redox couple to follow peptide/metal interactions, we have probed the influence of the spacer unit between the redox reporter and the metal-binding amino acid, and shown that these systems respond to mercury(II) more strongly than to other heavy metal ions.     

Nickel(II) cyclidenes with appended ethylpyridine receptor centers as molecular tweezers for dicarboxylic acids

A series of 14-, 15-, and 16-membered nickel(II) cyclidene macrocycles appended with 2-aminoethyl(2-pyridine) receptors I-III, respectively, were prepared and characterized by X-ray crystallography and NMR techniques. The 14- and 15-membered macrocycles I and II exist in a planar or extended Z-configuration, whereas the 16-membered macrocycle III was saddle shaped and had two asymmetric configurations in the unit cell (IIIa in a "capped" configuration and IIIb in an "open" configuration). Variable-temperature (1)H NMR studies of III in CD(3)CN were conducted (25-65 degrees C), and at room temperature, the interconversion between capping and uncapping is slow on the NMR time scale, resulting in a broad spectrum, whereas at 65 degrees C, interconversion was fast. (1)H NMR binding studies indicated I-III bind unsaturated dicarboxylic acids in a 1:1 stoichiometry with binding constants approaching 400 M(-)(1) in CD(3)CN, and the binding strength was dependent on the shape of the macrocyclic cyclidene platforms, whereas monocarboxylic acids were not bound. Generally, the planar 14-membered cyclidene I bound diacids the weakest and the 16-membered cyclidene III bound diacids the strongest. The presence of nuclear Overhauser effect spectrometry cross peaks in a 20 mM solution of 1:1 II-maleic acid indicates that the binding mode is ditopic with the guest being encapsulated by the aminoethylpyridine arms above the macrocyclic framework.     

Triphenylamine-based receptor for selective recognition of dicarboxylates

A new triphenylamine-based receptor 1 has been designed and synthesized for the recognition of aliphatic dicarboxylates of various chain lengths. This receptor has been designed to utilize an amide-urea conjugate for binding dicarboxylates. The receptor 1 is found to bind the dicarboxylates with moderate binding strength under a semi rigid, propeller shaped, fluorescent triphenylamine spacer. The binding behavior was studied in CH₃CN using ¹H NMR, fluorescence and UV-vis spectroscopic methods. The conformational behavior of 1 and its complexation modes have been investigated using classical and quantum mechanical theoretical methods. The receptor is found to be selective for long chain suberate.     

Synthesis of planar chiral ferrocene dicarboxylic acids using a sugar derivative as a resolution tool

The synthesis of planar chiral ferrocene dicarboxylic acids has been accomplished via diastereoselective esterification at the 2- and 3-positions with (+)-(4,6-O-benzylidene)methyl-α-d-glucopyranoside.     

Twisting (conformational changes)-based selective 2D chalcogeno podand fluorescent probes for Cr(III) and Fe(II)

The fluorenoazomethine containing chalcogeno podand fluorescent probes having N, O/S/Se coordinating donor unit show donor specific 'turn-on' recognition property towards metals (Cr(III), Fe(II) and Cu(II)), where the fluorescence signals are controlled by the conformational change of the ligand framework on binding with the metal ion.     

Design and synthesis of a unique ditopic macrocyclic fluorescent receptor containing furan ring as a spacer for the recognition of dicarboxylic acids

A macrocyclic fluorescent receptor was designed and synthesised and the binding study with three different types of dicarboxylic acids was performed with the receptor being found to have appreciable association constants. Downfield shifts of specific amide protons in 1:1 binding by ¹H NMR and the quenching in the fluorescence spectra reveal strong binding and thus unambiguously support the complexation of the receptor 1 with dicarboxylic acids.     

Highly selective recognition of lead ion in water by a podand fluoroionophore/gamma-cyclodextrin complex sensor

We report herein a novel podand fluoroionophore/gamma-cyclodextrin (gamma-CyD) complex sensor that shows markedly high selectivity for lead (Pb2+) ion in water.     

Polymerization of bis(2-oxazoline) compounds with dicarboxylic acids

A side reaction was found in the reaction of a 2-oxazoline compound with a carboxylic acid. It is an oxazoline ring opening addition to an amide group formed by the main reaction. In addition, certain phosphites were found to act as catalyst for the side reaction. The rate constants of the main and side reactions in the system of 2-phenyl-2-oxazoline and n-octanoic acid were obtained through simulation of the reactions on an analog computer. The side reaction makes it impossible for a very high molecular weight polymer to form in the reaction of a bis-2-oxazoline with a dicarboxylic acid, but makes it possible for a new crosslinked polymer to form when excess bis-2-oxazoline and a dicarboxylic acid are heated in the presence of a certain phosphite.     

Effect of stabilizing ligands bearing ferrocene moieties on the gold nanoparticle-catalyzed reactions of arylboronic acids

The homocoupling reaction of phenylboronic acid and demetalation reaction of ferrocenylboronic acid was inhibited and highly active, respectively, in the presence of gold nanoparticles stabilized by ligands containing ferrocene moieties.     

Structure and magnetic properties of Saturn-shaped fullerenol complexes with ferrocene and nickelocene dicarboxylic acids: DFT simulation

Structural Chemistry - DFT simulations of the electron and spin structure of fullerenol derivatives C60(OH)24·2Fe(C5H4COOH)2 and C60(OH)24·2Ni(C5H4COOH)2 have shown that these compounds...     

Calculation of energetic characteristics for the complexation of unsaturated dicarboxylic acids with cobalt(II)

Energetic characteristics for the complexation (preorganization energy and complementarity) of unsaturated dicarboxylic acids (UDAs) toward cobalt(II) were calculated with the use of HostDesigner software developed by B. Hay and T. Firman in 2002. Maleic acid (MA), itaconic acid (IA), cis,cis-muconic acid (cis,cis-MA), and allylmalonic acid (AA) were considered as UDAs. The calculated complementarity and preorganization energy, which are characterized by RMSD parameter (root-mean-square deviation) and conformation energy, respectively, are combined in a generalized desirability function D that enables one to judge the relative values of complexation energy. In terms of D and RMSD values, UDAs are arranged in the following sequence: IA > AA > MA > cis,cis-MA. A conclusion was drawn on the determining effect of complementarity of the considered UDAs on the energy of cobalt complexation with these ligands.