Ab initio structural trends and torsional sensitivity in n-hexane and comparisons with crystallographic structural results

The molecular structures of n-hexane were determined by RHF/4-21G ab initio geometry optimization at 30° grid points in its three-dimensional τ₁(C11–C8–C5–C1), τ₂(C14–C11–C8–C5), τ₃(C17–C14–C11–C8) conformational space. Of the resulting 12×12×12=1728 grid structures, 468 are symmetrically non-equivalent and were optimized constraining the torsions τ₁, τ₂, and τ₃ to the respective grid points, while all other structural parameters were relaxed without any constraints. From the results, complete parameter surfaces were constructed using natural cubic spline functions, which make it possible to calculate parameter gradients, |P|=[(∂P/∂τ_i)²+(∂P/∂τ_j)²]^1/2, where P is a C–C bond length or C–C–C angle. The parameter gradients provide an effective measure of the torsional sensitivity of the system and indicate that dynamic activities in one part of the molecule can significantly affect the density of states, and thus the contributions to vibrational entropy, in another part. This opens the possibility of dynamic entropic conformational steering in complex molecules; i.e. the generation of free energy contributions from dynamic effects of one part of a molecule on another. When the conformational trends in the calculated C–C bond lengths and C–C–C angles are compared with average parameters taken from some 900 crystallographic structures containing n-hexyl fragments or longer C–C bond sequences, some correlation between calculated and experimental trends in angles is found, in contrast to the bond lengths for which the two sets of data are in complete disagreement. The results confirm experiences often made in crystallography. That is, effects of temperature, crystal structure and packing, and molecular volume effects are manifested more clearly in bond lengths than bond angles which depend mainly on intramolecular properties. Frequency analyses of the τ₁, τ₂ and τ₃ torsional angles in the crystal structures show conformational steering in the sense that, if τ₁ is trans peri-planar (170°≤τ₁≤180°; −180°≤τ₁≤−170°), the values of τ₂ and τ₃ are clustered closely around the ideal gauche (±60°) and trans (±180°) positions. In contrast, when τ₁ is in the region (50°≤τ₁≤70°), there is a definite increase in the populations of τ₂ and τ₃ at −90 and −150°.     

Structure and conformation of 2,3,4-triphenyl-1-oxa-4-azabutadiene

2,3,4-triphenyl-1-oxa-4-azabutadine (C20H15NO) has been studied by X-ray analysis and AM1 molecular orbital methods. It crystallises in the triclinic space group P-1 with a=9.414(3), b=10.479(3), c=8.385(2) Å, =103.31(3)°, β=97.10(3)°, γ=74.09(1)°, V=772.5(4) ų, Z=2, D_c=1.227 gcm⁻³, and μ(MoK)=0.075 mm⁻¹ and F₀₀₀=300. The structure was solved by direct methods and refined to R=0.043 for 2672 reflections [I>2σ(I)]. The conformational analysis of the title compound were investigated by semi-empirical quantum mechanical AM1 calculations. The minimum conformation energies were calculated as a function of the three torsion angles θ₁(O(1)C(7)C(8)N(1)), θ₂(C(8)N(1)C(15)C(16)) and θ₃(C(14)C(9)C(8)N(1)). The results are compared with the X-ray results. C=O and C=N groups are twisted about each other by 95.5(2)°.     

1-二茂铁基-3-[(9-乙基)咔唑-3-基]丙烯酮的合成及三阶非线性光学性质

合成了一个新的非线性光学(NLO)有机材料1-二茂铁基-3-[(9-乙基)咔唑-3-基]丙烯酮(FCAK),并通过NMR、IR、MS和元素分析等技术手段进行了表征。 采用粉末Nd∶YAG激光技术测定了标题化合物的三阶非线性光学性质并确定了相关参数。 激光脉冲为4 ns时,非线性折射率n₂=-3.5×10^-18 m²/W,非线性吸收系数β=-2.7×10^-11 m/W,三阶非线性极化率χ⁽³⁾=2.04×10^-12 esu,三阶非线性分子超极化率γ=1.1×10^-30 esu。 激光脉冲为21 ps时,n₂=0.55×10^-18 m²/W,β=-0.6×10^-11 m/W,χ⁽³⁾=3.4×10^-13 esu,γ=0.13×10^-30 esu。     

Synthesis and crystal structure of two novel nickel (imidazole) complexes having hydrogen-bonded networks

Two nickel (imidazole) complexes, Ni(im)₆Cl₂·4H₂O (1) and Ni(im)₆(NO₃)₂ (2) (im=imidazole) have been synthesized and characterized by elemental analysis, IR, UV, TG and single crystal X-ray diffraction. 1 crystallizes in the triclinic space group P-1 with a=8.800(6) Å, b=9.081(6) Å, c=10.565(7) Å, =75.058(9)°, β=83.143(8)°, γ=61.722(8)°, V=718.3(8) Å³, Z=1 and R₁ (wR₂)=0.0469 (0.1497). 2 crystallizes in the trigonal space group R-3 with a=12.370(6) Å, b=12.370(6) Å, c=14.782(14) Å, =90.00°, β=90.00°, γ=120.00°, V=1959(2) Å³, Z=3 and R₁ (wR₂)=0.0358 (0.0955). 1 and 2 exhibit different supramolecular network due to their different counter anions and different hydrogen bonding connection. In compound 1, [Ni(im)₆]²⁺ cation and counter anions Cl⁻ alternatively array in an ABAB fashion via N–HCl hydrogen bonding. In compound 2, the plane of each NO₃²⁻ is almost parallel and each NO₃²⁻ connect three different [Ni(im)₆]²⁺ cations via N–HO hydrogen bonding.     

Thermodynamic characterization of ternary solutions of uncharged polymers

The thermodynamic interactions in aqueous solutions of uncharged polymers were studied. Using a gel-deswelling method, the water activities (chemical potentials) in binary and ternary (two polymers in one solvent) solutions of methylcellulose (MC), polyvinyl alcohol (PVA) and polyvinyl pirrolidone (PVP), respectively were determined at various polymer volume fractions (1.0 × 10⁻² < v₂ < 1.0 × 10⁻¹). On the theoretical basis of the Flory–Huggins approximations, the relevant solvent–segment (χ₁₂ or χ₁₃) and segment–segment pair interaction parameters (χ₂₃) have been calculated.

The solvent activity curves (ln a₁ versus polymer volume fraction) can be well described by a polynomial of third-degree in both the binary and the ternary solutions of the polymers. The solvent–segment interaction parameters exhibit a slight dependence on the polymer concentration. For each binary solution, the χ₁₂−v₂ function can be fitted by a straight line wich has a small positive slope. In the mixtures of two polymers, the values of the segment–segment (χ₂₃) interaction parameters were close to zero or sligthly negative (χ₂₃ 0 ± 0.03), indicating that under the studied conditions, the polymers in the ternary solutions are compatible.     

芘基查尔酮的合成及三阶非线性光学性质

合成了一种新的具有潜在应用价值的非线性光学(NLO)有机材料1-(芘-1-基)-3-(4-二甲氨基苯基)丙烯酮(PMAK),并通过 NMR、IR、MS和元素分析等技术手段进行了表征。 采用溶液Nd:YAG激光技术测定了PMAK的三阶非线性光学性质并确定了相关参数。 纳秒实验结果:折射率n₂=-3.5×10^-17 m²/W,吸收系数β=7.0×10^-10 m/W,极化率χ⁽³⁾=2.54×10^-11 esu,分子超极化率γ=3.44×10^-30 esu;皮秒实验结果:n₂=-2.8×10^-18 m²/W,β=8.3×10^-11 m/W,χ⁽³⁾=2.49×10^-12 esu,γ=3.33×10^-31 esu。     

Luminescent properties of carbon-rich starburst gold(I) acetylide complexes. Crystal structure of [TEE][Au(PCy3)]4 ([TEE]H4=tetraethynylethene)

Two carbon-rich starburst gold(I) acetylide complexes [TEE][Au(PCy₃)]₄ (3, [TEE]H₄=tetraethynylethene) and [TEB][Au(PCy₃)]₃ (6, [TEB]H₃=1,3,5-triethynylbenzene) were prepared and their UV–vis absorption, emission and excitation spectra have been recorded. In fluid CH₂Cl₂ solutions, 3 exhibits prompt ¹(ππ*) fluorescence with λ_0–0 and λ_max at 413 and 428 nm, respectively, while 6 displays ³(ππ*) phosphorescence with λ_0–0 and λ_max at 446 and 479 nm, respectively. The crystal structure of 3·CH₂Cl₂ has been determined.     

Kinetics study of the gas-phase reactions of C2F5OC(O)H and n-C3F7OC(O)H with OH radicals at 253–328 K

The rate constants, k₁ and k₂ for the reactions of C₂F₅OC(O)H and n-C₃F₇OC(O)H with OH radicals were measured using an FT-IR technique at 253–328 K. k₁ and k₂ were determined as (9.24 ± 1.33) × 10⁻¹³ exp[−(1230 ± 40)/T] and (1.41 ± 0.26) × 10⁻¹² exp[−(1260 ± 50)/T] cm³ molecule⁻¹ s⁻¹. The random errors reported are ±2 σ, and potential systematic errors of 10% could add to the k₁ and k₂. The atmospheric lifetimes of C₂F₅OC(O)H and n-C₃F₇OC(O)H with respect to reaction with OH radicals were estimated at 3.6 and 2.6 years, respectively.     

Tautomeric properties, conformations and structure of N-(2-hydroxy-5-chlorophenyl) salicylaldimine

The crystal structure of N-(2-hydroxy-5-chlorophenyl) salicylaldimine (C₁₃H₁₀NO₂Cl) was determined by X-ray analysis. It crystallizes orthorhombic space group P2₁2₁2₁ with a=12.967(2) Å, b=14.438(3) Å, c=6.231(3) Å, V=1166.5(6) Å³, Z=4, D_c=1.41 g cm⁻³ and μ(MoK)=0.315 mm⁻¹. The title compound is thermochromic and the molecule is nearly planar. Both tautomeric forms (keto and enol forms in 68(3) and 32(3)%, respectively) are present in the solid state. The molecules contain strong intramolecular hydrogen bonds, N1–H1O1/O2 (2.515(1) and 2.581(2) Å) for the keto form and O1–H01N1 for the enol one. There is also strong intermolecular O2–HO1 hydrogen bonding (2.599(2) Å) between neighbouring molecules. Minimum energy conformations AM1 were calculated as a function of the three torsion angles, θ₁(N1–C7–C6–C5), θ₂(C8–N1–C7–C6) and θ₃(C9–C8–N1–C7), varied every 10°. Although the molecule is nearly planar, the AM1 optimized geometry of the title compound is not planar. The non-planar conformation of the title compound corresponding to the optimized X-ray structure is the most stable conformation in all calculations.     

Syntheses and structural determination of nine-coordinate K3[Nd(nta)2(H2O)]·6H2O and K3[Er(nta)2(H2O)]·5H2O

The syntheses and structural determination of Nd^III and Er^III complexes with nitrilotriacetic acid (nta) were reported in this paper. Their crystal and molecular structures and compositions were determined by single-crystal X-ray structure analyses and elemental analyses, respectively. The crystal of K₃[Nd^III(nta)₂(H₂O)]·6H₂O complex belongs to monoclinic crystal system and C2/c space group. The crystal data are as follows: a=1.5490(11) nm, b=1.3028(9) nm, c=2.6237(18) nm, β=96.803(10)°, V=5.257(6) nm³, Z=8, M=763.89, D_c=1.930 g cm⁻³, μ=2.535 mm⁻¹ and F(000)=3048. The final R₁ and wR₁ are 0.0390 and 0.0703 for 4501 (I>2σ(I)) unique reflections, R₂ and wR₂ are 0.0758 and 0.0783 for all 10474 reflections, respectively. The Nd^IIIN₂O₇ part in the [Nd^III(nta)₂(H₂O)]³⁻ complex anion has a pseudo-monocapped square antiprismatic nine-coordinate structure in which the eight coordinate atoms (two N and six O) are from the two nta ligands and a water molecule coordinate to the central Nd^III ion directly. The crystal of the K₃[Er^III(nta)₂(H₂O)]·5H₂O complex also belongs to monoclinic crystal system and C2/c space group. The crystal data are as follows: a=1.5343(5) nm, b=1.2880(4) nm, c=2.6154(8) nm, b=96.033(5)°, V=5.140(3) nm³, Z=8, M=768.89, D_c=1.987 g cm⁻³, μ=3.833 mm⁻¹ and F(000)=3032. The final R₁ and wR₁ are 0.0321 and 0.0671 for 4445 (I>2σ(I)) unique reflections, R₂ and wR₂ are 0.0432 and 0.0699 for all 10207 reflections, respectively. The Er^IIIN₂O₇ part in the [Er^III(nta)₂(H₂O)]³⁻ complex anion has the same structure as Nd^IIIN₂O₇ part in which the eight coordinate atoms (two N and six O) are from the two nta ligands and a water molecule coordinate to the central Nd^III ion directly.     

Photochemical synthesis and structural characterization of (η-C5Me5)3Mo3(CO)4(μ2-H)(μ3-O): an unprecedented 46-electron trimolybdenum cluster containing a localized monoprotonated Mo---Mo double bond

Irradiation of the 30-electron Mo₂(η⁵-C₅Me₅)₂(CO)₄ and Re₂(CO)₁₀ in toluene solution (containing H₂O) afforded (in 1–2% yields) a novel triangular metal cluster, (η⁵-C₅Me₅)₃Mo₃(CO)₄(η₂-H)(η₃-O) (1), which was characterized by a single-crystal X-ray diffraction study. Compound 1, of pseudo C_s-m symmetry, has a triangulo-Mo₃(η₃-O) core with composite Mo---H---Mo and Mo---Mo electron-pair bonds along one unusually short edge (2.660(1) Å) and Mo--- electron-pair bonds along the other two edges (2.916(1) and 2.917(1) Å). The edge-bridged hydride ligand, which displays a characteristic high-field proton NMR resonance at δ −17.79 ppm, was not found from the crystallographic determination but was located via a quantitative potential-energy-minimization method. This procedure unambiguously established that the optimized hydrogen position, which corresponds to a distinct coordination site with identical Mo---H distances of 1.85 Å, is the only one that can be sterically occupied by a metal-bound hydride ligand. This 46-electron species is the first electron-deficient trimolybdenum cluster containing a monoprotonated Mo---Mo double bond; its existence is attributed to ligand overcrowding due to the bulky pentamethylcyclopentadienyl rings. Black (η⁵- C₅Me₅)₃Mo₃(CO)₄(η₂-H)(η₃-O) · 1/2THF crystallizes with two formula species in a triclinic unit cell of P1 symmetry with a 8.603(4), b 11.115(4), c 19.412(11) Å, 80.69(4)°, β 101.10(4)°, and γ 98.88(3)° at −40° C. Least-squares refinement (RAELS with 221 variables) of one independent Mo₃ molecule and a centrosymmetrically-disordered THF molecule converged at R₁(F) 5.62%, R₂(F 6.88% for 8460 independent diffractometry data (I₀ ρ 3σ(I₀ collected at −40° C with Mo-K radiation     

Surface properties of ω-perfluorooctyl-alkyl polyacrylates: odd–even effect

A series of ω-perfluorooctyl-alkyl polyacrylates has been prepared and analysed. The odd–even effect, already observed in the case of liquid crystalline polymers has been exhibited for perfluorinated ones. Values of the contact angles to advanced (θ_a), with withdrawal (θ_r), as well as the contact angle hysteresis (Δθ) of various ω-perfluorooctyl-alkyl polyacrylates in water at 20 °C are described. Contrary to the advancing contact angle which is almost independent of spacer length, the receding one varies strongly with it.     

Molecular weights of polystyrenes in toluene solutions by light scattering. Comparison between classical values and values deduced from a new method

Light scattering measurements in toluene solutions are performed for a series of monodisperse polystyrenes with a molecular weight M_w range from 4×10³ to 8×10⁶. The scattered polarized intensities I_v and the natural depolarization ratios ρ_n are registered with different apparatus at λ=633 or 488 nm and the M_w values are deduced through different formulae. The complete Carr and Zimm formula (CL_a), from I_v and ρ_n, and the usual simplified formula (CL_b), from I_v, are considered for the classical method. An already demonstrated formula is considered for the new method (New). Values of M_w and related parameters do not depend on the experimental systems used but deviations appear when using different formulae. The deviations are generally low (about 10%) but often systematic: M_w(CL_a)<M_w(CL_b)<M_w(New). The most important difference concerns the effect of destructive interferences for M_w>5×10⁵: the new formula leads to a lower increase from θ=90° to θ→0 for M_w values (θ is the observation angle). For instance, in the 8×10⁶ sample, M_w(θ→0)/M_w(θ=90°)=3.6 instead of 6.1, which implies a revision of the usual determination of the radius of gyration, R_g.     

Regioselective addition of protic acids to tricarbonyliron complexes of 2,3,5,6-tetrakis(methylene)-7-oxabicyclo[2.2.1]heptane. Crystal structure of (C10H10O)Fe2(CO)6

The main product of the thermal reaction between the title oxatetraene (I) and Fe₂(CO)₉ in ether/pentane is the bimetallic complex (C₁₀H₁₀O)Fe₂(CO)₆-diexo (II), which has C_2υ symmetry both in the solid state (X-ray analysis) and in solution. Whereas the protonation of the free ligand leads usually to polymerisation, the addition of a protic acid such as CF₃CO₂H to II proceeds cleanly at 0°C giving first a (η 3-allyl)Fe(CO)₃O₂CCF₃ complex (III). The intermediate III adds a second equivalent of acid in a slower step (k₂/k₁ = 0.1, CF₃CO₂D/CHCl₃, 0°C) giving the trans-bis(η³-allyl) isomer IV with high regioselectivity. The addition of CF₃CO₂D yields the corresponding deuteriomethylallyliron tricarbonyl trifluoroacetates III′ and IV′. No further deuterium incorporation is observed at 0°C, thus confirming the kinetic control of the regioselective double addition of protic acid to II.     

Organometallic complexes for nonlinear optics: Part 31. Cubic hyperpolarizabilities of ferrocenyl-linked gold and ruthenium complexes

The complexes [Fe{η-C₅H₄---(E)---CH=CH---4-C₆H₄CCX}₂] [X=SiMe₃ (1), H (2), Au(PCy₃) (3), Au(PPh₃) (4), Au(PMe₃) (5), RuCl(dppm)₂ (7), RuCl(dppe)₂ (8)] and [Fe{η-C₅H₄---(E)---CH=CH---4-C₆H₄CH=CRuCl(dppm)₂}₂](PF₆)₂ (6) have been prepared and the identities of 1 and 7 confirmed by single-crystal X-ray structural studies. Complexes 1–8 exhibit reversible oxidation waves in their cyclic voltammograms attributed to the Fe^II/III couple of the ferrocenyl groups, 6–8 also showing reversible (7, 8) or non-reversible (6) processes attributed to Ru-centered oxidation. Cubic nonlinearities at 800 nm by the Z-scan method are low for 1–5; in contrast, complexes 6 and 7 exhibit large negative γ_real and large γ_imag values. A factor of 4 difference in γ and two-photon absorption cross-section σ₂ values for 6 and 7 suggest that they have potential as protically switchable NLO materials.     

A simple method for predicting the frequency of the infrared inactive carbonyl stretching mode in LM(CO)5 molecules with C4V symmetry

The paper presents a new method for predicting the frequency of the b₁ mode, which is infrared-inactive, in complexes of the type LM(CO)₅ belonging to C_4V point group. The method was based on the relation λ₃=λ₄+[(1−δ/δ)](λ₁−λ₂), where δ=(λ₁−λ₂)/(λ₁−λ₂+λ₃−λ₄), λ₁, λ₂, λ₃ and λ₄ are the λ parameters of the , , b₁ and e modes, respectively. For a large numbers of complexes of the type LM(CO)₅ the average value of δ was found to be 0.80, with a standard deviation of 0.02. With the use of average value of δ, the frequencies of b₁ mode were estimated. The result obtained indicated that there exists a rather good fit between observed and calculated frequencies, with a mean error of 2.7 cm⁻¹. In addition, it was shown that the δ parameter can be used as a criterion of the correct band assignment for the complexes understudy.     

Anomalous electric birefringence behavior of sonicated DNA fragments as observed in reversing-pulse transients and steady-state sign reversal: a multicomponent approach

Anomalous electric birefringence signals of a sonicated and column-fractionated medium-size calf thymus DNA sample (bp  =  570) in Na⁺ solutions were measured at 7 °C. The reversing-pulse electric birefringence (RPEB) signal pattern was theoretically calculated in the low electric field region for two axially symmetric models coexisting in equilibrium in solution. The RPEB theory is based on the electric dipole moment due to ion-fluctuation along the longitudinal direction and the electric polarizability anisotropy (Δ′), together with various electric and optical parameters assigned to the models. An analytical method was developed for the steady-state birefringence of the two-component system in a wide range of electric fields. The NaDNA samples exhibit complex RPEB patterns mixed with negative- and positive-going profiles. An experimental RPEB signal of NaDNA at an absorbance (A₂₆₀) of 8 was fitted to theoretical curve at weak electric fields. The anomalous RPEB signal was attributed to the component 2, which shows a dip in the buildup and another in the reverse processes with a positive sign and a larger relaxation time. For the component 1, a normal DNA profile with negative sign is associated with a narrow dip in the reverse and a faster relaxation time in the decay signal. The field-strength dependence of observed steady-state birefringence δ(∞) could be fitted for NaDNA at A₂₆₀  =  8 by the SUSID orientation function with saturated ionic and electronic moments. An apparent positive maximum and the sign reversal in δ(∞) at weak electric fields is an interplay between the positive component 2 with positive optical factor Δg and negative Δ′ and the negative component 1 with negative Δg and positive Δ′. Possible conformation of two DNA components involved in solution was estimated.     

一种新型钼钒多酸化合物的合成、结构与荧光性能

采用水热技术,合成了一种新型四帽Keggin结构多酸化合物[H₃Mo₈^ⅥV₈^ⅣO₄₀(AsO₄)](en)₂(4,4-bipy)₇·9H₂O(en:乙二胺;bipy:联吡啶)(1),并对化合物进行了元素分析、红外光谱、X射线光电子能谱和X射线单晶结构分析。 晶体结构分析表明, 化合物属三斜晶系,P1空间群,晶胞参数a=1.47395(5) nm,b=1.48172(6) nm,c=1.62881(7) nm,α=66.16(3)°,β=87.15(2)°,γ=63.42(1)°,V=2.8723(2) nm³,Z=1,R₁=0.0728,wR₂=0.2014。 化合物由四帽Keggin多酸阴离子、4,4'-联吡啶、乙二胺和结晶水分子构成,化合物分子间存在大量的氢键,使化合物1形成3-D超分子结构。 荧光测试表明,化合物1能发出较强的荧光,有可能成为潜在的光活性材料。     

Microwave spectrum and conformation of isopropyl fluoroformate

The microwave spectrum of isopropyl fluoroformate is characterized by intense a-type R-branch transitions from one conformational species. The rotational constants of the ground state, A₀ = 4967.0(8) MHz, B₀ = 1704.69(2) MHz, C₀ = 1468.86(1) MHz and κ = −0.8651(2) are consistent with a τ₁ (O=COC) = 0°, τ₂(COCH) ˜35° structure. This structure can be viewed as a combination of the two conformational species found in ethyl fluoroformate. Two vibrational satellites having rotational constants A₀ = 4963(5) MHz, B₀ = 1694.11(7) MHz. C₀ = 1471.43(4) MHz and A₀=4998(6) MHz, B₀ = 1705.21(7) MHz, C₀ = 1471.10(4) MHz have been assigned.     

Structure cristalline et conformation en solution aqueuse de la carnosine (β-alanyl-L-histidine)

Carnosine (β-alanyl-L-histidine) is a biologically active molecule involved in muscular metabolism. It crystallises in the C; space group with a = 24.725 Å b = 5,427 Å c = 8,004 Å β = 100,2° (Z = 4)

In the crystal, acid and basic groups are engaged in hydrogen bonds whose strength is evaluated through IR frequencies. Molecular conformation in the solid state is defined by τ₁ = /t-177° τ₂ = −38° φ = −96° ψ = +131° χ₁ = 181° χ₂₁ = 62°

NMR study of carnosine in aqueous solution indicates that rotation about CH₂-CH₂ is free and that the other angles take the following values: Ø −150° or −90° and X₁ = 165° or 315°. Infrared and Raman spectra suggest that τ₂ undergoes small changes when going from crystal to solution while ψ is close to +150°.