Bis­[6‐amino‐3‐methyl‐5‐nitro­so­pyrimidine‐2,4(1H,3H)‐dionato]­di­aqua­zinc(II) dihydrate,redetermined at 120 K: a three‐dimensional hydrogen‐bonded framework

The title compound, whose structure has been redetermined at 120 K, contains almost centrosymmetric trans‐[Zn(C₅H₅N₄O₃)₂(H₂O)₂]·2H₂O units, together with two uncoordinated water mol­ecules. An extensive series of O—H⃛O, O—H⃛N and N—H⃛O hydrogen bonds gives rise to a three‐dimensional framework structure.     

N‐Propionylhydroxylamine forms a three‐dimensional hydrogen‐bonded framework structure

The title compound, N‐hydroxy­propan­amide, C₃H₇NO₂, crystallizes with Z′ = 3 in P2₁/c. The mol­ecules are linked by three N—H?O hydrogen bonds [N?O 2.8012 (16) to 2.8958 (15) Å; N—H?O 163 to 168°] and by three O—H?O hydrogen bonds [O?O 2.6589 (15) to 2.6775 (17) Å; O—H?O 165 to 177°] into a single three‐dimensional framework.     

Hexamethylenediammonium bis(chloroacetate): a three‐dimensional hydrogen‐bonded framework structure

In the title compound, C₆H₁₈N₂²⁺·2C₂H₂ClO₂⁻, the cation lies across an inversion centre in the P space group. The ions are linked by two two‐centre N—H...O hydrogen bonds and by one three‐centre N—H...(O)₂ hydrogen bond to form a three‐dimensional framework structure. The significance of this study lies in the analysis of the complex hydrogen‐bonded structure and in the comparison of this structure with those of other simple hexamethylenediammonium salts.     

6‐Amino‐2‐(3,4‐di­methoxy­benzyl­amino)‐3‐methyl‐5‐nitro­so­pyrimidin‐4(3H)‐one: hydrogen‐bonded sheets form interdigitated bilayers

Molecules of the title compound, C₁₄H₁₇N₅O₄, exhibit a highly polarized molecular–electronic structure. The mol­ecules are linked into sheets by two N—H⋯O hydrogen bonds [H⋯O = 2.03 and 2.02 Å, N⋯O = 2.836 (2) and 2.887 (2) Å, and N—H⋯O = 153 and 168°], augmented by a single C—H⋯O hydrogen bond [H⋯O = 2.47 Å, C⋯O = 3.403 (2) Å and C—H⋯O = 166°]. Pairs of sheets, related by inversion, form bilayers with interdigitated di­methoxy­benzyl substituents, weakly linked by a further C—H⋯O interaction [H⋯O = 2.50 Å, C⋯O = 3.350 (2) Å and C—H⋯O = 146°].     

4,6‐Diaminopyrimidine‐2(1H)‐thione hemihydrate: a three‐dimensional hydrogen‐bonded framework

In the title compound, C₄H₆N₄S·0.5H₂O, there are two independent pyrimidinethione units, both of which lie across mirror planes in the space group Cmca. Hence, the H atoms bonded to the ring N atoms in each molecule are disordered over two symmetry‐related sites, each having an occupancy of 0.5. The water molecule lies across a twofold rotation axis parallel to [010]. The molecular components of (I) are linked by seven independent hydrogen bonds, of N—H...N, N—H...S, N—H...O and O—H...S types. A combination of disordered N—H...N hydrogen bonds and ordered N—H...S hydrogen bonds links the pyrimidinethione units into a continuous tubular structure. The water molecule acts as both a double donor of hydrogen bonds and a double acceptor, forming hydrogen bonds with components of four distinct pyrimidinethione tubes, thus linking these tubes into a three‐dimensional structure.     

[6‐Amino‐3‐methyl‐5‐nitro­so­pyrimidine‐2,4(1H,3H)‐dionato]­sodium dihydrate at 150 K: coordination‐polymer ladders linked by hydrogen bonds

In the title compound, [Na(C₅H₅N₄O₃)]·2H₂O, each Na cation is linked to three C₅H₄N₄O₃^? anions and two water mol­ecules, forming approximately octahedral NaNO₅ units; the cations and the anions form molecular ladders, and each ladder is linked to four neighbouring ladders by O—H?O and O—H?N hydrogen bonds.     

Barium bis­[6‐amino‐3‐methyl‐5‐nitro­so­pyrimidine‐2,4(1H,3H)‐dionate] trihydrate: coordination polymer chains linked by hydrogen bonds

The title complex, catena‐poly[[triaquabarium(II)]‐di‐μ‐6‐amino‐3‐methyl‐5‐nitro­so­pyrimidine‐2,4(1H,3H)‐dionato], [Ba(C₅H₅N₄O₃)₂(H₂O)₃]_n, forms a coordination polymer chain in which the two distinct anions use different ligating atoms to bridge pairs of cations. Adjacent pairs of cations are also linked by pairs of bridging water mol­ecules. The chains are linked into a single three‐dimensional framework by an extensive series of hydrogen bonds.     

A hydrogen‐bonded chain of rings in 5‐amino‐1‐(4‐methoxybenzoyl)‐3‐methylpyrazole and a three‐dimensional hydrogen‐bonded framework in 5‐amino‐3‐methyl‐1‐(2‐nitrobenzoyl)pyrazole

The molecules of 5‐amino‐1‐(4‐methoxybenzoyl)‐3‐methylpyrazole, C₁₂H₁₃N₃O₂, (I), and 5‐amino‐3‐methyl‐1‐(2‐nitrobenzoyl)pyrazole, C₁₁H₁₀N₄O₃, (II), both contain intramolecular N—H...O hydrogen bonds. The molecules of (I) are linked into a chain of rings by a combination of N—H...N and N—H...π(arene) hydrogen bonds, while those of (II) are linked into a three‐dimensional framework structure by N—H...N and C—H...O hydrogen bonds.     

4‐Amino‐6‐benzyl­oxy‐2‐(methyl­sulfanyl)‐5‐nitro­so­pyrimidine: hydrogen‐bonded dimers linked into π‐stacked chains

The title compound, C₁₂H₁₂N₄O₂S, crystallizes with Z′ = 2 in space group P2₁/c. The intramolecular dimensions are consis­tent with a highly polarized electronic structure. Each of the independent mol­ecules forms a centrosymmetric dimer linked by paired N—H?N hydrogen bonds, and these dimers are linked into a single type of chain by aromatic π–π‐stacking interactions.     

2‐Amino‐3‐methyl‐6‐[methyl(phenyl)amino]‐5‐nitropyrimidin‐4(3H)‐one: polarized molecules within hydrogen‐bonded sheets

The pyrimidinone ring in the title compound, C₁₂H₁₃N₅O₃, is effectively planar, despite the presence of five substituents. The bond distances provide evidence for significant polarization of the electronic structure, with charge separation, and the molecules are linked into sheets by a combination of N—H...O and N—H...π(arene) hydrogen bonds. Comparisons are made with the molecular and supramolecular structures of the precursor compound 2‐amino‐6‐[methyl(phenyl)amino]‐5‐nitropyrimidin‐4(3H)‐one.     

The three‐dimensional hydrogen‐bonded framework structure in the 1:1 proton‐transfer compound of the drug quinacrine with 5‐sulfosalicylic acid

For the hydrated proton‐transfer compound 6‐chloro‐9‐[(4‐diethylammonio‐2‐methylbutyl)amino]‐2‐methoxyacridinium 3‐carboxylato‐4‐hydroxybenzenesulfonate dihydrate, C₂₃H₃₂ClN₃O²⁺·C₇H₄O₆S²⁻·2H₂O, (I), the conformational features, specifically those of the extended side chain at the 9‐position of the acridine parent, have been compared with those of quinacrinium dichloride dihydrate (the drug atabrine or mepacrine). Racemic compound (I) has a three‐dimensional hydrogen‐bonded framework structure similar to atabrine but also involves the water molecules and both the carboxylate and sulfonate groups of the anion in structure extension. The comparable conformational features found in this uncommon derivative of quinacrine indicate that (I) has potential as a possible pharmaceutical substitute for atabrine.     

N‐(4‐Nitrobenzoyl)‐N′‐phenylhydrazine: a three‐dimensional hydrogen‐bonded framework

In the title compound (systematic name: N‐anilino‐4‐nitrobenzamide), C₁₃H₁₁N₃O₃, the molecules are linked into a complex three‐dimensional framework structure by a combination of two‐centre N—H...O and C—H...O hydrogen bonds and a three‐centre N—H...(O,N) hydrogen bond.     

A three‐dimensional hydrogen‐bonded framework in 2‐amino‐6‐(N‐methylanilino)pyrimidin‐4(3H)‐one and a ribbon of fused hydrogen‐bonded rings in 2‐amino‐6‐(N‐methylanilino)‐5‐nitropyrimidin‐4(3H)‐one

The molecular dimensions of both 2‐amino‐6‐(N‐methylanilino)pyrimidin‐4(3H)‐one, C₁₁H₁₂N₄O, (I), and 2‐amino‐6‐(N‐methylanilino)‐5‐nitropyrimidin‐4(3H)‐one, C₁₁H₁₁N₅O₃, (II), are consistent with considerable polarization of the molecular–electronic structures. The molecules of (I) are linked into a three‐dimensional framework by a combination of one N—H...N hydrogen bond, two independent N—H...O hydrogen bonds and one C—H...π(arene) hydrogen bond. The molecules of (II) are linked into ribbons containing three types of edge‐fused ring by the combination of two independent three‐centre N—H...(O)₂ hydrogen bonds.     

trans‐Diaqua­{5,5′‐[(E,E)‐pyridine‐2,6‐diylbis(methyl­idynenitrilo)]bis­[pyrimi­dine‐2,4(1H,3H)‐dione]}zinc(II) nitrate hexa­fluorophosphate trihydrate

The title compound, [Zn(C₁₅H₁₁N₇O₄)(H₂O)₂](NO₃)(PF₆)·3H₂O, contains a mononuclear zinc(II) complex. The Zn²⁺ centre is seven‐coordinated in a slightly distorted penta­gonal–bipyramidal geometry, with the two water O atoms located in the apical positions, and the pyridine N atom, the two imine N atoms and two carbonyl O atoms of the uracil groups located in the equatorial plane. The charge is balanced by PF₆⁻ and NO₃⁻ anions.     

μ‐1,4‐Benzenedicarboxylato‐bis[trans‐aqua(1,4,8,11‐tetraazacyclotetradecane)nickel(II)] diperchlorate forms a three‐dimensional hydrogen‐bonded framework

The title compound, [Ni₂(C₈H₄O₄)(C₁₀H₂₄N₄)₂(H₂O)₂](ClO₄)₂, contains two independent octahedral Ni^II centres with trans‐NiN₄O₂ chromophores. The bridging benzene­dicarboxyl­ate ligand is bonded to the two Ni atoms, each via one O atom of each carboxyl­ate, while the other O atom participates in an intramolecular N—H?O hydrogen bond, forming an S(6) motif. The cations are linked to the perchlorate anions via O—H?O and N—H?O hydrogen bonds [O?O 2.904 (6) and 2.898 (6) Å; O—H?O 158 (6) and 165 (6)°; N?O 3.175 (7) and 3.116 (7) Å; N—H?O 168 and 166°] to form molecular ladders. These ladders are linked by further O—H?O and N—H?O hydrogen bonds [O?O 2.717 (6) and 2.730 (5) Å; O—H?O 170 (4) and 163 (6)°; N?O 3.373 (7) and 3.253 (7) Å; N—H?O 163 and 167°] to form a continuous three‐dimensional framework. The perchlorate anions both participate in three hydrogen bonds, and both are thus fully ordered.     

5‐Amino‐3‐tert‐butyl‐1‐(4‐nitro­phen­yl)‐1H‐pyrazole forms hydrogen‐bonded sheets of alternating R(20) and R(32) rings

Molecules of the title compound, C₁₃H₁₆N₄O₂, are linked by one N—H⋯O hydrogen bond [H⋯O = 2.47 Å, N⋯O = 3.326 (2) Å and N—H⋯O = 166°] and one N—H⋯N hydrogen bond [H⋯N = 2.19 Å, N⋯N = 3.063 (2) Å and N—H⋯N = 173°] into sheets containing alternating (20) and (32) rings, both types of which are centrosymmetric.     

(5RS)‐5‐(4‐Methoxyphenyl)‐2‐(methylsulfanyl)benzo[g]pyrimido[4,5‐b]quinoline‐4,6,11(3H,5H,12H)‐trione,with Z′ = 3, forms a three‐dimensional hydrogen‐bonded framework containing five types of hydrogen bond

The title compound, C₂₃H₁₇N₃O₄S, crystallizes with Z′ = 3 in the space group P. Two of the three independent molecules are broadly similar in terms of both their molecular conformations and their participation in hydrogen bonds, but the third molecule differs from the other two in both of these respects. The molecules are linked by a combination of N—H...O, N—H...N, C—H...O, C—H...N and C—H...π(arene) hydrogen bonds to form a continuous three‐dimensional framework structure within which a centrosymmetric six‐molecule aggregate can be identified as a key structural element.     

2‐Amino‐4,6‐di­methoxy‐5‐nitro­so­pyrimidine–water (4/3): seven independent molecular components are linked into a three‐dimensional framework by six three‐centre and eight two‐centre hydrogen bonds

In the title compound, 4C₆H₈N₄O₃·3H₂O, the pyrimidine mol­ecules all exhibit a polarized molecular electronic structure; the seven‐component asymmetric unit can be selected as a closed cyclic aggregate and the linking of these aggregates can be analysed in terms of translational chain motifs running parallel to [110], [210] and [011], which combine to generate a single three‐dimensional framework.     

(R)‐1‐Phenyl­ethyl­ammonium 6‐amino‐5‐nitro­pyrimidine‐2,4(1H,3H)‐dionate (R)‐1‐phenyl­ethyl­amine hemisolvate: hydrogen‐bonded sheets of ions with pendent solvent mol­ecules

In the title compound, 2C₈H₁₂N⁺·2C₄H₃N₄O₄⁻·C₈H₁₁N, the anions are linked by paired N—H⋯N hydrogen bonds [H⋯N = 2.07 and 2.11 Å, N⋯N = 2.942 (3) and 2.978 (3) Å and N—H⋯N = 173 and 170°] and by paired N—H⋯O hydrogen bonds [H⋯O = 1.98 and 2.05 Å, N⋯O = 2.855 (3) and 2.917 (3) Å, and N—H⋯O = 173 and 167°] into chains of rings. These chains are linked into sheets by further N—H⋯O hydrogen bonds in which all of the donors are provided by the cations [H⋯O = 1.83–2.17 Å, N⋯O = 2.747 (3)–2.965 (3) Å and N—H⋯O = 141–168°]. The neutral amine molecule is pendent from the sheet and is linked to it by a single N—H⋯N hydrogen bond [H⋯N = 2.00 Å, N⋯N = 2.901 (3) Å and N—H⋯N = 175°].     

A three‐dimensional hydrogen‐bonded network in bis(4‐hydroxyanilinium) selenate(VI) dihydrate

The title compound, 2C₆H₈NO⁺·SeO₄²⁻·2H₂O, contains 4‐hydroxyanilinium cations, selenate(VI) anions and water molecules. One of the two independent cations is nearly planar (excluding the ammonium H atoms), while the other is markedly nonplanar, with the hydroxy and ammonium groups displaced from the plane of the benzene ring. This results from the antiparallel orientation of the cations, which interact through oppositely polarized ammonium and hydroxy groups. Ionic and hydrogen‐bonding interactions join the oppositely charged units into a three‐dimensional network. This work demonstrates the usefulness of 4‐aminophenol in the crystal engineering of organic–inorganic hybrid compounds.