l‐Phenyl­alanyl‐l‐alanine dihydrate

A new type of molecular arrangement for dipeptides is observed in the crystal structure of l ‐phenyl­alanyl‐l ‐alanine dihydrate, C₁₂H₁₆N₂O₃·2H₂O. Two l ‐Phe and two l ‐Ala side chains aggregate into large hydro­phobic columns within a three‐dimensional hydrogen‐bond network.     

l‐Phenyl­alanyl‐l‐tryptophan 0.75‐hydrate

The title compound, C₂₀H₂₁N₃O₃·0.75H₂O, crystallizes as exceedingly thin fibers. The crystal packing arrangement is related to those of other hydro­phobic dipeptides with phenyl­alanine residues, but the structure has pseudo‐tetra­gonal symmetry in an ortho­rhom­bic space group with four peptide mol­ecules and three water mol­ecules in the asymmetric unit.     

l‐Phenyl­alanyl‐l‐isoleucine 0.88‐hydrate

The asymmetric unit in the crystal structure of the title compound, C₁₅H₂₂N₂O₃·0.88H₂O, contains two peptide mol­ecules with completely different conformations. The structure is divided into hydro­phobic and hydro­philic layers, with channels of water mol­ecules at the layer interface.     

l‐Isoleucyl‐l‐serine 0.33‐hydrate,l‐phenyl­alanyl‐l‐serine and l‐methionyl‐l‐serine 0.34‐hydrate

The structures of the title dipeptides, C₉H₁₈N₂O₄·0.33H₂O, C₁₂H₁₆N₂O₄ and C₈H₁₆N₂O₄S·0.34H₂O, complete a series of investigations focused on l ‐Xaa‐l ‐serine peptides, where Xaa is a hydro­phobic residue. All three structures are divided into hydro­philic and hydro­phobic layers. The hydro­philic layers are thin for l ‐phenyl­alanyl‐l ‐serine, rendered possible by an unusual peptide conformation, and thick for l ‐isoleucyl‐l ‐serine and l ‐methionyl‐l ‐serine, which include cocrystallized water mol­ecules on the twofold axes.     

Two modifications of l‐alanyl‐l‐tyrosyl‐l‐alanine with different solvent mol­ecules in the crystal lattice

The low‐temperature crystal and mol­ecular structure analyses of two modifications of l ‐alanyl‐l ‐tyrosyl‐l ‐alanine with water, C₁₅H₂₁N₃O₅·2.63H₂O [(I), at 9 K], and ethanol, C₁₅H₂₁N₃O₅·C₂H₅O [(II), at 20 K], solvent mol­ecules in the crystal lattice show that the overall conformations of both modifications of the title tripeptide are practically the same. Moreover, despite the presence of different solvent mol­ecules in the crystal lattice, the specific inter­molecular inter­actions characteristic for individual tripeptide mol­ecules of (I) and (II) are conserved. The crystal packing of the two modifications of Ala‐Tyr‐Ala differ from each other only in the solvent region. The tight arrangements of tripeptide mol­ecules seem to be responsible for similar displacement parameters for all non‐H atoms, despite the different distances from the mol­ecular centre of mass. Comparison of the displacement parameters between the room‐ and low‐temperature structures shows that an average U_eq value decrease of about 80% takes place at 9 K [for (I)] and 20 K [for (II)] with respect to room temperature.     

An NH3+⃛phenyl interaction in l‐­phenyl­alanyl‐l‐valine

One of the amino H atoms of l ‐phenyl­alanyl‐l ‐valine, C₁₄H₂₀N₂O₃, participates in a rare secondary interaction in being accepted by the aromatic ring of the phenyl­alanine side chain. The phenyl group is also a donor in a weak hydrogen bond to the peptide carbonyl group.     

N‐Amidino‐4‐hydroxy‐l‐proline monohydrate and N‐amidino‐l‐methionine monohydrate

The title amidino‐amino acids (a‐Hpro), C₆H₁₁N₃O₃·H₂O, (I), and a‐Met, C₆H₁₃N₃O₂S·H₂O, (II), respectively, exist in the form of zwitterions. The five‐membered pyrrolidine ring in (I) adopts an envelope conformation, with the Cγ atom out of the plane defined by the rest of the ring atoms, and with the hydroxyl and carboxyl­ate groups in a trans configuration relative to the ring plane. The two crystallographically independent zwitterions in (II) reveal quite different conformations of their side chains and a slightly different orientation of the guanidine moiety with respect to the carboxyl­ate group. The crystal structures of both (I) and (II) are stabilized by extensive networks of O—H·O, N—H·O and C—H·O hydrogen bonds, the network being three‐dimensional in (I) and two‐dimensional in (II).     

The monohydrates of the four polar dipeptides l‐seryl‐l‐asparagine,l‐seryl‐l‐tyrosine,l‐tryptophanyl‐l‐serine and l‐tyrosyl‐l‐tryptophan

The crystal structures of the four dipeptides l ‐seryl‐l ‐asparagine monohydrate, C₇H₁₃N₃O₅·H₂O, l ‐seryl‐l ‐tyrosine monohydrate, C₁₂H₁₆N₂O₅·H₂O, l ‐tryptophanyl‐l ‐serine monohydrate, C₁₄H₁₇N₃O₄·H₂O, and l ‐tyrosyl‐l ‐tryptophan monohydrate, C₂₀H₂₁N₃O₄·H₂O, are dominated by extensive hydrogen‐bonding networks that include cocrystallized solvent water molecules. Side‐chain conformations are discussed on the basis of previous observations in dipeptides. These four dipeptide structures greatly expand our knowledge on dipeptides incorporating polar residues such as serine, asparagine, threonine, tyrosine and tryptophan.     

l‐Seryl‐l‐phenyl­alanine

The peptide bond in the crystal structure of the title compound, C₈H₁₆N₂O₄, deviates substantially from planarity in the same manner as in other l ‐Ser‐l ‐Xaa dipeptides, where Xaa is a hydro­phobic residue.     

l‐Valyl‐l‐serine trihydrate

The valine side chains in the crystal structure of the title compound [systematic name: 2‐(2‐ammonio‐3‐methyl­butan­amido)‐3‐hydroxy­propano­ate tri­hydrate], C₈H₁₆N₂O₄·3H₂O, stack along an a axis of 4.77 Å to form hydro­phobic columns surrounded by remarkable water/hydroxyl shells. The peptide main chains are connected by hydrogen bonds in two‐dimensional layers. The peptide mol­ecules in each layer are related only by translation, and generate a very rare pattern. This is rendered possible through the formation of the shortest C^α—H·O(carboxyl­ate) inter­action ever recorded.     

l‐Isoleucyl‐l‐phenyl­alanine dihydrate

The structure of the title compound, C₁₅H₂₂N₂O₃·2H₂O, was derived from data collected on a very thin twinned needle. The peptide mol­ecule is in a rare conformation normally associated with hydro­phobic dipeptides that form nanotubes. Nevertheless, the present structure is divided into hydro­phobic and hydro­philic layers.     

A non‐planar peptide bond in l‐seryl‐l‐valine

The C^α—C′—N—C^α (ω) torsion angle of the peptide bond in the crystal structure of the title compound, C₈H₁₆N₂O₄, is 157.37 (15)°. This is the second‐largest deviation from planarity observed for a small linear peptide.     

N‐(l‐2‐Aminobutyryl)‐l‐alanine and 2‐(l‐alanylamino)‐l‐butyric acid 0.33‐hydrate

The crystal structure of N‐(l ‐2‐amino­butyryl)‐l ‐alanine, C₇H₁₄N₂O₃, is closely related to the structure of l ‐alanyl‐l ‐alanine, both being tetragonal, while the retro‐analogue 2‐(l ‐alanyl­amino)‐l ‐butyric acid 0.33‐hydrate, C₇H₁₄N₂O₃·­0.33H₂O, forms a new type of molecular columnar structure with three peptide mol­ecules in the asymmetric unit.     

Ethane‐1,1,2‐trisphosphonic acid hemihydrate

Ethane‐1,1,2‐trisphosphonic acid crystallizes as a hemihydrate, C₂H₉O₉P₃·0.5H₂O, in which the water O atom lies on an inversion centre in the space group P2₁/c. The acid component, which contains a short but noncentred O—H...O hydrogen bond, adopts a gauche conformation. The acid components are linked by an extensive series of O—H...O hydrogen bonds to form layers, which are linked into pairs by the water molecules.     

Methyl 4‐O‐β‐l‐fucopyranosyl α‐­d‐­glucopyranoside hemihydrate

The crystal structure of methyl 4‐O‐β‐l ‐fuco­pyran­osyl α‐d ‐gluco­pyran­oside hemihydrate C₁₃H₂₄O₁₀·0.5H₂O is organized in sheets with antiparallel strands, where hydro­phobic interaction accounts for partial stabilization. Infinite hydrogen‐bonding networks are observed within each layer as well as between layers; some of these hydrogen bonds are mediated by water mol­ecules. The conformation of the disaccharide is described by the glycosidic torsion angles: ?_H = ?6.1° and ψ_H = 34.3°. The global energy minimum conformation as calculated by molecular mechanics in vacuo has ?_H = ?58° and ψ_H = ?20°. Thus, quite substantial changes are observed between the in vacuo structure and the crystal structure with its infinite hydrogen‐bonding networks.     

l‐Alanylglycyl‐l‐alanine monohydrate at 20 K

The X‐ray crystal structure of the title compound, C₈H₁₅N₃O₄·H₂O, at 20 K (space group P2₁) reveals that the mol­ecular conformation of the tripeptide is remarkably different from the water‐free form (space group P2₁2₁2₁) reported previously [Padiyar & Seshadri (1996), Acta Cryst. C 52 , 1693–1695].     

l‐Isoleucyl‐l‐asparagine 1.094‐hydrate: a hybrid hydrogen‐bonding pattern

The title compound, C₁₀H₂₀N₃O₄·1.094H₂O, crystallizes with two dipeptide molecules in the asymmetric unit, each participating in two head‐to‐tail chains with hydrogen bonds between the terminal amino and carboxylate groups. As with many other dipeptides, the resulting structure is divided into distinct layers, but as the amide groups of the two peptide molecules participate in different types of interaction, the observed hydrogen bonds within a peptide main‐chain layer (as distinct from the side‐chain/solvent regions) cannot adapt to any of the four basic patterns observed previously for dipeptides. Instead, a rare hybrid pattern is formed.     

l‐Leucinium perchlorate

Crystals of l ‐leucinium perchlorate, C₆H₁₄NO₂⁺·ClO₄⁻, are built up from protonated l ‐leucinium cations and perchlorate anions. l ‐Leucinium cations related by a twofold screw axis are inter­connected by N—H⋯O hydrogen bonds into zigzag chains parallel to [010]. The O atoms of the perchlorate anions act as acceptors of hydrogen bonds that link the l ‐leucinium chains into separated but inter­acting two‐dimensional layers parallel to (001). Since the title compound crystallizes in a non‐centrosymmetric space group, it can be useful as a material for non‐linear optics. The efficiency of second harmonic generation is about twice that of K₂[HPO₄].     

2,6‐Dimethoxy‐7,9‐dimethylpurinium iodide hemihydrate

In the title compound, C₉H₁₃N₄O₂⁺·I⁻·0.5H₂O, the non‐H atoms of the ionic components lie on a mirror plane in Cmca, with the O atom of the partial water molecule lying on a twofold rotation axis. Whereas one of the methoxy methyl groups is directed away from the adjacent N‐methyl group, the other methoxy methyl group is directed towards its adjacent N‐methyl group. The conformation of the methoxy methyl groups provides an explanation for the outcomes of intramolecular thermal rearrangements of 2,6‐dialkoxy‐7,9‐dimethylpurinium salts.     

Ammonium N‐acetyl‐l‐threoninate and methyl­ammonium N‐acetyl‐l‐threoninate

Ammonium N‐acetyl‐l ‐threoninate, NH₄⁺·C₆H₁₀NO₄^?, and methyl­ammonium N‐acetyl‐l ‐threoninate, CH₆N⁺·­C₆H₁₀NO₄^?, crystallize in the orthorhombic P2₁2₁2₁ and monoclinic P2₁ space groups, respectively. The two crystals present the same packing features consisting of infinite ribbons of screw‐related N‐acetyl‐l ‐threoninate anions linked together through pairs of hydrogen bonds. The cations interconnect neighbouring ribbons of anions involving all the nitrogen‐H atoms in three‐dimensional networks of hydrogen bonds. The hydrogen‐bond patterns include asymmetric `three‐centred' systems. In both structures, the Thr side chain is in the favoured (g^?g⁺) conformation.