N‐(o‐Chloro­phenyl)‐2,5‐di­methyl­pyrrole‐3‐carb­aldehyde

Crystal structure analysis of the title compound, C₁₃H₁₂ClNO, reveals three crystallographically independent mol­ecules in the asymmetric unit. The main conformational difference between these mol­ecules is the orientation of the phenyl rings with respect to the pyrrole rings. The coplanar arrangement of the aldehyde groups attached to the pyrrole rings influences the pyrrole‐ring geometry. The C2—C3 and N1—C5 bonds are noticeably longer than the C4—C5 and N1—C2 bonds. Two independent mol­ecules of the title compound form dimers via intermolecular C—H⃛O hydrogen bonds [D⃛A = 3.400 (3) Å and D—H⃛A = 157°]. The perpendicular orientation of the phenyl and pyrrole rings of one independent mol­ecule and its symmetry‐related mol­ecule allows C—H⃛π interactions, with an H⃛centroid distance of 2.85 Å and a C—H⃛π angle of 155°. The distances between the H atom and the pyrrole‐ring atoms indicate that the C—H bond points towards one of the bonds in the pyrrole ring.     

1‐(2‐Hydro­xy‐4‐methoxy­phenyl)‐3‐(2,3,4‐tri­methoxy­phenyl)­prop‐2‐en‐1‐one

The title compound, C₁₉H₂₀O₆, crystallizes in the centrosymmetric space group P2₁/c with one mol­ecule in the asymmetric unit. The mol­ecule is approximately planar and the dihedral angle between the phenyl rings is 11.0 (1)°. The H atoms of the central propenone group are trans. There is an intramolecular O—H⃛O hydrogen bond and the mol­ecules are crosslinked by four intermolecular C—H⃛O hydrogen bonds, producing a three‐dimensional network.     

N‐{4‐Bromo‐2‐[(3‐bromo‐1‐phenylsulfonyl‐1H‐indol‐2‐yl)methyl]‐5‐methoxyphenyl}acetamide

In the title compound, C₂₄H₂₀Br₂N₂O₄S, the indole ring system is planar and the S atom has a distorted tetrahedral configuration. The sulfonyl‐bound phenyl ring is orthogonal to the indole ring system and the conformation of the phenyl­sulfonyl substituent with respect to the indole moiety is influenced by intramolecular C—H⃛O hydrogen bonds involving the two sulfonyl O atoms. The mean plane through the acetyl­amido group makes a dihedral angle of 57.0 (1)° with the phenyl ring of the benzyl moiety. In the crystal, glide‐related mol­ecules are linked together by N—H⃛O hydrogen bonds and C—H⃛π interactions to form molecular chains, which extend through the crystal. Inversion‐related chains are interlinked by C—H⃛π interactions to form molecular layers parallel to the bc plane. These layers are interconnected through π–π interactions involving the five‐ and six‐membered rings of the indole moiety.     

Hydro­gen‐bonded dimers of 1,8,10‐trihydroxy‐10‐(prop‐2‐enyl)­anthracen‐9(10H)‐one: S(6), R(10) and R(14) motifs

The central ring of the anthrone system in the title compound, C₁₇H₁₄O₄, has a shallow envelope conformation, and each of the two outer rings is inclined at an angle of 17.41 (3)°. In the solid state, the mol­ecules exist as centrosymmetrically related O—H⃛O hydrogen‐bonded dimers. Two intramolecular O—H⃛O hydrogen bonds, involving the central carbonyl O atom and having a graph‐set motif of S(6), are observed. These intramolecular interactions lead co‐operatively to an O—H⃛O⃛H—O pattern that has a binary graph‐set motif of (10).     

Ferrocene compounds. XXXIX.

In the title compound, [Fe(C₅H₅)(C₁₄H₁₃O)], the plane of the heterocyclic ring is almost perpendicular to the plane of the substituted cyclo­penta­dienyl ring, and the heterocyclic ring adopts a half‐chair conformation. The conformation of the nearly parallel cyclo­penta­dienyl (Cp) rings [the dihedral angle between their planes is 2.7 (1)°] is almost halfway between eclipsed and staggered, and the rings are mutually twisted by about 19.4 (2)° (mean value). The mean lengths of the C—C bonds in the substituted and unsubstituted cyclo­penta­dienyl ring are 1.420 (2) and 1.406 (3) Å, respectively, and the Fe—C distances range from 2.029 (2) to 2.051 (2) Å. The phenyl and unsubstituted cyclo­penta­dienyl rings are involved in C—H⃛π interactions, with intermolecular H⃛centroid distances of 2.85 and 3.14 Å for C—H⃛π(Ph), and 2.88 Å for C—H⃛π(Cp). In two of these interactions, the C—H bond points towards one of the ring bonds rather than towards the ring centroid. In the crystal structure, the C—H⃛π interactions connect the mol­ecules into a three‐dimensional framework.     

Hydro­gen‐bond networks in tris(4‐hydroxy­phenyl)­methane and its 1:1 molecular complex with 4,4′‐bi­pyridine

In tris(4‐hydroxy­phenyl)­methane (or 4,4′,4′′‐methane­triyl­tri­phenol), C₁₉H₁₆O₃, mol­ecules are connected by O—H⃛O hydrogen bonds [O⃛O = 2.662 (2) and 2.648 (2) Å] into two‐dimensional square networks that are twofold interpenetrated. In tris(4‐hydroxy­phenyl)­methane–4,4′‐bi­pyridine (1/1), C₁₉H₁₆O₃·C₁₀H₈N₂, trisphenol mol­ecules form rectangular networks via O—H⃛O [O⃛O = 2.694 (3) Å] and C—H⃛O [C⃛O = 3.384 (3) Å] hydrogen bonds. Bi­pyridine mol­ecules hydrogen bonded to phenol moieties [O⃛N = 2.622 (3) and 2.764 (3) Å] fill the voids to complete the structure.     

Intermolecular O—H⃛O and C—H⃛π(C5H5), and intramolecular C—H⃛O interactions in 2-(ferrocenyl)thiophene-3-carboxylic acid

The title compound, [Fe(C₅H₅)(C₁₀H₇O₂S)], an important precursor en route to organometallic donor–π–acceptor systems, forms dimers in the solid state through cyclic intermolecular carboxyl­ic acid O—H⃛O hydrogen bonds, graph set R(8) [O⃛O 2.661 (2) Å and O—H⃛O 175°]. Intermolecular C_Cp—H⃛π_Cp interactions between the unsubstituted cyclo­penta­dienyl (Cp) rings and C_thiazole—H⃛π_Cp interactions link neighbouring mol­ecules into a three-dimensional network [C⃛Cg 3.753 (7) Å and C—H⃛Cg 156°, and C⃛Cg 3.687 (3) Å and C—H⃛Cg 129°; Cg is the ring centroid]. Intramolecular C—H⃛O inter­actions are present, graph set S(7) [C⃛O 2.925 (3) Å and C—H⃛O 120°, and the closest C—H⃛S_thienyl contact has a C⃛S distance of 3.058 (2) Å].     

Bis(2‐aminopyridinium) maleate

Two cyclic eight‐membered hydrogen‐bonded rings exist in the title compound, 2C₅H₇N₂⁺·C₄H₂O₄²⁻, involving the 2‐amino­pyridinium and maleate ions. The dihedral angle between the two pyridinium rings hydrogen bonded to the maleate ion is 74.80 (4)°. The maleate anion lies on a twofold axis and is linked to the pyridinium cations by intermolecular N—H⃛O hydrogen bonds. The heterocycle is fully proton­ated, which enables amino–imino tautomerization.     

Hydro­gen bonding and π–π stacking in di­methyl­genistein

The title compound, 5‐hydroxy‐4′,7‐di­methoxy­isoflavone, C₁₇H₁₄O₅, is composed of a benzo­pyran­one moiety, a phenyl moiety and two methoxy groups. The benzo­pyran­one ring is not coplanar with the phenyl ring, the dihedral angle between them being 56.28 (3)°. The two methoxy groups are nearly coplanar with their corresponding rings, having C—C—O—C torsion angles of 2.9 (2) and 5.9 (2)°. The mol­ecules are linked by C—H·O hydrogen bonds into sheets containing classical centrosymmetric (8) rings. The sheets are further linked by aromatic π–π stacking interactions and C—H·O hydrogen bonds into a supramolecular structure.     

3,3′‐[o‐Phenyl­enebis­(methyl­eneoxy)]­bis(6‐chloro­flavone) and 3,3′‐propyl­ene­dioxy­bis­[6‐chloro‐2‐(2‐furyl)‐4H‐1‐benzopyran‐4‐one]

The title compound 3,3′‐[o‐phenyl­enebis­(methyl­eneoxy)]­bis(6‐chloro­flavone), C₃₈H₂₄Cl₂O₆, (I), crystallizes in the monoclinic space group C2/c, with the molecules lying across twofold rotation axes so that there is half a mol­ecule in the asymmetric unit, while the other title compound, 3,3′‐propyl­ene­dioxy­bis­[6‐chloro‐2‐(2‐furyl)‐4H‐1‐benzopyran‐4‐one], C₂₉H₁₈Cl₂O₈, (II), crystallizes in monoclinic space group P2₁/n with one mol­ecule in the asymmetric unit. In both compounds, the benzopyran moiety is nearly planar, with dihedral angles between the two fused rings of 1.43 (8)° in (I), and 2.54 (7) and 3.00 (6)° with respect to the benzopyran moieties in the two halves of (II). The furan rings are twisted by 8.3 (1) and 8.4 (1)° in the two halves of (II). In both compounds, the molecular structure is stabilized by intramolecular C—H⃛O hydrogen bonds, while the crystal packing is stabilized by C—H⃛Cl and C—H⃛O intermolecular hydrogen bonds in (I) and (II), respectively.     

9,10‐Di­phenyl‐9,10‐epi­dioxy­anthra­cene and 9,10‐di­hydro‐10,10‐di­methoxy‐9‐phenyl­anthracen‐9‐ol

9,10‐Di­phenyl‐9,10‐epi­dioxy­anthracene, C₂₆H₁₈O₂, (I), was accidentally used in a photo­oxy­genation reaction that produced 9,10‐di­hydro‐10,10‐di­methoxy‐9‐phenyl­anthracen‐9‐ol, C₂₂H₂₀O₃, (II). In both compounds, the phenyl rings are approximately orthogonal to the anthracene moiety. The conformation of the anthracene moiety differs as a result of substitution. Intramolecular C—H⃛O interactions in (I) form two approximately planar S(5) rings in each of the two crystallographically independent mol­ecules. The packing of (I) and (II) consists of molecular dimers stabilized by C—H⃛O interactions and of molecular chains stabilized by O—H⃛O interactions, respectively.     

Pomiferin

The crystal structure of pomiferin, 3‐(3,4‐di­hydroxy­phenyl)‐5‐hydroxy‐8,8‐di­methyl‐6‐(3‐methyl­but‐2‐enyl)‐4H,8H‐pyrano[2,3‐h]­chromen‐4‐one, C₂₅H₂₄O₆, has been determined. The benzo­pyran­one ring system is nearly planar and the dihedral angle between the phenyl ring and the benzo­pyran­one moiety is 40.85 (4)°. The crystal structure is stabilized by a one‐dimensional chain of inter‐ and intramolecular O—H⃛O hydrogen bonds, with O⃛O distances in the range 2.5546 (15)–2.7999 (16) Å.     

2‐Nitroso‐1,3‐diphenyl‐1,2,3,4‐tetrahydrobenzo[b][1,6]naphthyridine

The title compound, C₂₄H₁₉N₃O, crystallizes in the centrosymmetric space group P2₁/a with one mol­ecule in the asymmetric unit. The tetra­hydro­pyridine ring has a boat conformation. The dihedral angle between the fused pyridine rings is 16.2 (1)°. The equatorial and axial orientations of the two phenyl groups with respect to the tetra­hydro­pyridine ring are confirmed. The nitroso group is coplanar with the attached C—N—C group. The interplanar angle formed between the fused tetra­hydro­pyridine and benzene planes is 13.4 (1)°. The crystal packing is stabilized by an intermolecular C—H⃛O hydrogen bond, which forms a C(9) graph‐set chain running along the [001] direction.     

Taxiphyllin from Henriettella fasci­cularis

(2R)‐α‐(β‐d ‐Gluco­pyran­osyl­oxy)‐4‐hydroxy­benzene­aceto­nitrile (taxiphyllin) dihydrate, C₁₄H₁₇NO₇·2H₂O, is a naturally occurring cyano­genetic glycoside which has been isolated from Henriettella fascicularis (Sw.) C. Wright (Melastomataceae). Its structure is stabilized by a wealth of intermolecular O—H⃛O and O—H⃛N hydrogen bonds spun into a three‐dimensional network. Further stabilization arises from an intramolecular O—H⃛O bond and weak intermolecular C—H⃛O interactions. The very anisotropic growth speeds of the basal pinacoids from methanol mirror a certain structural inhomogeneity.     

The epimeric 9‐oxobicyclo[3.3.1]nonane‐3‐carboxylic acids: hydrogen‐bonding patterns of the endo acid and the lactol of the exo acid

The two δ‐keto carboxylic acids of the title, both C₁₀H₁₄O₃, are epimeric at the site of carboxyl attachment. The endo (3α) epimer, (I), has its keto‐acid ring in a boat conformation, with the tilt of the carboxyl group creating conformational chirality. The mol­ecules form hydrogen bonds by centrosymmetric pairing of carboxyl groups across the corners of the chosen cell [O⃛O = 2.671 (2) Å and O—H⃛O = 179 (2)°]. Two close intermolecular C—H⃛O contacts exist for the ketone. The exo (3β) epimer exists in the closed ring–chain tautomeric form as the lactol, 8‐hydroxy‐9‐oxatri­cyclo­[5.3.1.0^3,8]­undecan‐10‐one, (II). The mol­ecules have conformational chirality, and the hydrogen‐bonding scheme involves intermolecular hydroxyl‐to‐carbonyl chains of mol­ecules screw‐related in b [O⃛O = 2.741 (2) Å and O—H⃛O = 177 (2)°].     

The molecular and supramolecular structures of the isomeric compounds 5,7‐di­methoxy­imidazo­[1,2‐c]­pyrimidine and 7‐methoxy‐1‐methyl­imidazo­[1,2‐a]­pyrimidin‐5(1H)‐one

The supramolecular structures of the isomeric compounds 5,7‐di­methoxy­imidazo­[1,2‐c]­pyrimidine, C₈H₉N₃O₂, (I), and 7‐methoxy‐1‐methyl­imidazo­[1,2‐a]­pyrimidin‐5(1H)‐one, C₈H₉N₃O₂, (II), are determined by weak C—H⃛N and C—H⃛O hydrogen bonds in (I), which generate alternating linked centrosymmetric R(8) and R(10) rings that form a ribbon running parallel to the c axis, and by C—H⃛O bonds in (II), which link the mol­ecules into sheets comprising centro­symmetric R(10) and R(22) rings.     

N‐(4‐Methoxy­benzyl­idene)‐N′‐(2‐pyridyl)­hydrazine

Molecules of the title compound (alternative name p‐methoxybenzaldehyde 2‐pyridyl­hydrazone), C₁₃H₁₃N₃O, adopt an E configuration about the azomethine C=N double bond. Molecules are almost planar, the dihedral angle between the pyridine and methoxy­phenyl rings being only 6.19 (12)°. Pairwise N—H⃛N hydrogen bonds [R(8) in graph‐set notation] link centrosymmetrically related mol­ecules into discrete pairs.     

1,3‐Bis(4‐nitro­phenyl)­triazene

The structure of the title compound, C₁₂H₉N₅O₄, reveals an almost planar mol­ecule (r.m.s. deviation = 0.061 Å), in which the interplanar angle between the phenyl rings is 5.7 (1)° and the largest interplanar angle is that between the phenyl ring and the nitro group of one of the 4‐nitro­phenyl substituents [8.8 (3)°]. The observed mol­ecular conformation suggests a delocalization of π‐electrons extended over the diazo­amine group and the terminal aryl substituents. Intermolecular N—H⃛O interactions between the twofold screw‐related mol­ecules give rise to helical chains along the [010] direction. Intermolecular C—H⃛O interactions then generate sheets of mol­ecules in the (10) plane, and these sheets are held together by N⃛C and O⃛O π–π interactions.     

2-[1-(Hydroxyimino)ethyl]-2,5,5-trimethylperhydropyrimidine–butane-2,3-dione monooxime (1/1)

The title compound, C₉H₁₉N₃O·C₄H₇NO₂, displays strong intramolecular O—H⃛N [O⃛N 2.6743 (13) Å] and N—H⃛N [N⃛N 2.6791 (15) Å] hydrogen bonds, and strong intermolecular O—H⃛N [O⃛N 2.7949 (15) Å] and N—H⃛O [N⃛O 3.0924 (16) Å] hydrogen bonds. This creates chains of per­hydro­pyrimidine mol­ecules, linked by hydrogen bonds. Each chain is linked to a partner chain, through hydrogen bonds to two butane-2,3-dione monooxime mol­ecules, in a structure reminiscent of a ladder.     

Unusual molecular conformation in dissymmetric propyl­ene‐linker compounds containing pyrazolo­[3,4‐d]­pyrimidine and phthalimide moieties

The crystal structure of 4,6‐bis(methylsulfanyl)‐1‐phthalimidopropyl‐1H‐pyrazolo[3,4‐d]pyrimidine, C₁₈H₁₇N₅O₂S₂, (VI), reveals an unusual folded conformation due to an apparent intramolecular C—H⃛π interaction between the 6‐methyl­­sul­fanyl and phenyl groups. However, the closely related compound 6‐methyl­sulfanyl‐1‐phthalimido­propyl‐4‐(pyrroli­din‐1‐yl)‐1H‐pyrazolo­[3,4‐d]­pyrimidine, C₂₁H₂₂N₆O₂S, (VII), exhibits a fully extended structure, devoid of any intramol­ecular C—H⃛π or π–π interactions. The crystal packing of both mol­ecules involves intermolecular stacking interactions due to aromatic π–π interactions. In addition, (VI) exhibits intermolecular C—H⃛O hydrogen bonding and (VII) exhibits dimerization of the mol­ecules through intermolecular C—H⃛N hydrogen bonding.