Hard and soft X-ray absorption spectroscopic investigation of aqueous Fe(III)-hydroxamate siderophore complexes

Microorganisms release organic macromolecules, such as siderophores, to obtain Fe(III) from natural systems. While the relative stabilities of Fe(III)-siderophore complexes are well-studied, the structural environments of Fe(III) and ligands in the complex are not well-understood. Using the X-ray absorption spectroscopy (XAS) at the Fe- and N-K absorption edges, we characterized the nature of Fe(III) interactions with a hydroxamate siderophore, desferrioxamine B (desB), and its small structural analogue, acetohydroxamic acid (aHa), as a function of pH (1.4-11.4). These experimental studies are complemented with DFT calculations. The Fe-XAS studies suggest that Fe(aHa)3 is the dominant species in aqueous solutions in the pH range of 2.8-10.1, consistent with thermochemical information. However, the N-XAS and resonance Raman studies show that the chemical state of the ligand in the Fe(aHa)3 complex changes significantly with pH, and these variations are correlated with further deprotonation of the Fe(aHa)3 complex. The N-XAS studies also indicate that the overlap of Fe 3d orbitals with the molecular orbitals of the hydroxamate group is significant. The Fe- and N-XAS studies of Fe(III)-desB complexes indicated that Fe(desB)+ is the dominant species between pH values of 1.4 and 11.4, consistent with predicted stability constants. This information is useful in understanding the role of iron in bacterial transport, siderosis treatment, and actinide sequestration at contaminated sites. This is the first N-XAS study of aqueous metal ligand complexes, which demonstrates the applications of soft-XAS in studying the electronic structure of metal complexes of organic macromolecules in aqueous solutions.     

X-ray structural and spectroscopic investigation of cyanamidonitrate nickel(II) complexes with pyrazole type ligands

New cyanamidonitrate complexes of the type [Ni(NO₂NCN)₂L₄], where L = pyrazole (pz), 3(5)-methylpyrazole (mpz), 3,5-dimethylpyrazole (dmpz), 3,4,5-trimethylpyrazole (tmpz), indazole (benzopyrazole; inz), 4-bromopyrazole (Br-pz) and 4-iodopyrazole (I-pz) have been isolated and characterized by i.r. and electronic spectroscopy. The crystal structure of [Ni(NO₂NCN)₂(pz)₄] was solved by X-ray crystallography. The Ni^II environment is practically octahedral, composed of four tertiary nitrogens from pyrazole ligands and two nitrile nitrogens from cyanamidonitrate groups. According to the spectral results similar molecular structures can be attributed to all remaining complexes. The i.r. spectra exhibit changes in the cyanamidonitrate vibrations caused by coordination of this group. The electronic spectra are in agreement with the practically octahedral Ni^II environment.     

X-ray absorption spectroscopic studies of high-spin nonheme (alkylperoxo)iron(III) intermediates

The reactions of iron(II) complexes [Fe(T(pt-Bu,i-Pr))(OH)] (1a, Tp(t-Bu,i-Pr) = hydrotris(3-tert-butyl-5-isopropyl-1-pyrazolyl)borate), [Fe(6-Me2BPMCN)(OTf)2] (1b, 6-Me2BPMCN = N,N'-bis((2-methylpyridin-6-yl)methyl)-N,N'-dimethyl-trans-1,2-diaminocyclohexane), and [Fe(L8Py2)(OTf)](OTf) (1c, L8Py2 = 1,5-bis(pyridin-2-ylmethyl)-1,5-diazacyclooctane) with tert-BuOOH give rise to high-spin FeIII-OOR complexes. X-ray absorption spectra (XAS) of these high-spin species show characteristic features, distinct from those of low-spin Fe-OOR complexes (Rohde, J.-U.; et al. J. Am. Chem. Soc. 2004, 126, 16750-16761). These include (1) an intense 1s --> 3d preedge feature, with an area around 20 units, (2) an edge energy, ranging from 7122 to 7126 eV, that is affected by the coordination environment, and (3) a 1.86-1.96 A Fe-OOR bond, compared to the 1.78 A Fe-OOR bond in low-spin complexes. These unique features likely arise from a flexible first coordination sphere in those complexes. The difference in Fe-OOR bond length may rationalize differences in reactivity between low-spin and high-spin FeIII-OOR species.     

Solid state complexes of nickel(II) and 4-imidazoleacetic acid: X-ray crystallography and spectroscopic investigation

The stoichiometric reaction of NiCl₂·6H₂O with sodium 4-imidazoleacetate Na(IA) in absolute MeOH yields blue crystals of Ni(IA)₂·4H₂O·2MeOH (1). This product decomposes rapidly in air, losing two MeOH molecules and producing Ni(IA)₂·4H₂O (2). Compound (1) when left in the mother liquor, slowly recrystallizes forming [Ni(IA)₂(MeOH)₂] (3), which is stable in air and suitable for single crystal X-ray diffraction studies. These crystals consist of slightly distorted octahedral coordination units in which the carboxylic oxygen, imidazole N3 nitrogen and the MeOH oxygen atoms act as coordination centers. The i.r. features, due to MeOH molecules, were employed to characterize the compounds studied. The reflectance spectrum of (3) was interpreted on the basis of octahedral and tetragonal symmetry of the NiO₄N₂ chromophore.     

Simultaneous flow injection speciation of iron(II) and iron(III) cyano complexes utilizing electrochemical and atomic absorption detectors in series

Summary A method is described for the simultaneous speciation of Fe(CN) ₆ ^4– and Fe(CN) ₆ ^3– in a flow injection (FIA) system comprising electrochemical (EC) and flame atomic absorption spectrometry (AAS) detectors in series. One of these species is detected amperometrically at a Pt-electrode by applying the required potential and measuring the resulting reduction or oxidation current of the appropriate iron cyanide complex. Total iron in both species is determined by an AAS detector. The EC detector is inherently more sensitive, with a detection limit of 0.5 g Fe l^–1 and a relative standard deviation of 1.0% for a 0.040 g Fe ml^–1 sample. The limit of detection for the AAS detector is 0.5 g Fe ml^–1, and the relative standard deviation for a 5.70 g Fe ml^–1 sample is 0.40%. The method enables up to 60 analyses (120 speciations) per hour and obviates the problem of easy oxidation of Fe(CN) ₆ ^4– .

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Simultane Speziation von Eisen(II)- und Eisen(III)-Cyanokomplexen durch Flie\injektionsanalyse mit Hilfe von hintereinander geschalteten elektrochemischen und AAS-Detektoren

     

Preparation and spectroscopic characterization of iron(II) and copper(II) complexes of a functionalized crown ether

Condensation between 4′-aminobenzo-15-crown-5- and 4-antipyrinecarboxaldehyde yielded the functionalized crown ether (L = 1,5-dimethyl-4-[(2,3,5,6,8,9,11,12-octahydro-1,4,7,10,13-benzopentaoxacyclopentadecin-15-ylimino)methyl]-2-phenyl-1,2-dihydro-3H-pyrazol-3-one). A 1:1 (Na⁺:L) complex has been prepared. The reaction of Fe(II) and Cu(II) salts with L gave complexes of composition [Fe(L)Cl₂] and [Cu(L)₂Cl₂]. Heteronuclear complexes [Fe(L)Cl₂Na]ClO₄ and [Cu(L)₂Cl₂Na]ClO₄ have also been synthesized from the reactions of [Fe(L)Cl₂] and [Cu(L)₂Cl₂] with NaClO₄. The compounds have been characterized by microanalyses and spectroscopic methods.     

Synthesis and electrochemical investigation of a series of iron(II) complexes with bidentate,tridentate and hexadentate ligands

Iron(II) complexes of a bidentate, a hexadentate and a series of tridentate ligands have been prepared and characterized. Electrochemical properties have shown that of the tridentate ligands, those capable of dπ-pπ bonding between the pyridyl rings and central ligand atom can stabilize formal low oxidation states (I,O, −I) of the metal. A bidentate ligand, 2-(2-pyridyl) imidazole although resembling 2,2′-bipyridine in structure, does not stabilize any low oxidation states and its iron(II) complex is reduced irreversibly to iron(O). The iron(II) complex of a hexadentate ligand, tetra(2-picolyl)ethylenediamine, is reduced in two, one electron steps to yield formal Fe(I) and Fe(O) oxidation states. However, both of these reductions are totally irreversible at a Pt and HMDE electrode.     

An X-ray photoelectron spectroscopic study of some copper(II) tetraaza complexes

A selected series of copper(II) tetraaza complexes, involving open-chain and macrocyclic ligands, has been studied by X-ray photoelectron spectroscopy. The binding energy data obtained are interpreted in terms of the structures of these complexes with particular reference to the existence of π-electron delocalisation over metal and ligand, peripheral ring substituents, cation-anion interaction and hydration water. It is apparent that the degree of cation-anion interaction and photoreduction is a function of the existing experimental conditions.     

Tuning the spin-transition properties of pyrene-decorated 2,6-bispyrazolylpyridine based Fe(II) complexes

Two 2,6-bispyrazolylpyridine ligands (bpp) were functionalized with pyrene moieties through linkers of different lengths. In the ligand 2,6-di(1H-pyrazol-1-yl)-4-(pyren-1-yl)pyridine (L1) the pyrene group is directly connected to the bpp moiety via a C-C single bond, while in the ligand 4-(2,6-di(1H-pyrazol-1-yl)pyridin-4-yl)benzyl-4-(pyren-1-yl)butanoate (L2) it is separated by a benzyl ester group involving a flexible butanoic chain. Subsequent complexation of Fe(II) salts revealed dramatic the influence of the nature of the pyrene substitution on the spin-transition behaviour of the resulting complexes. Thus, compound [Fe(L1)(2)](ClO(4))(2) (1) is blocked in its high spin state due to constraints caused by a strong intermolecular π-π stacking in its structure. On the other hand, the flexible chain of ligand L2 in compounds [Fe(L2)(2)](ClO(4))(2) (2) and [Fe(L2)(2)](BF(4))(2)·CH(3)CN·H(2)O (3) prevents structural constraints allowing for reversible spin transitions. Temperature-dependent studies of the photophysical properties of compound 3 do not reveal any obvious correlation between the fluorescence of the pyrene group and the spin state of the spin transition core.     

An infrared and electronic spectroscopic study of a series of nickel(II) amine complexes

Summary Qualitative infrared and electronic spectroscopic data for a series of nickel(II) amine complexes suggest structures involving octahedral (transtetragonal) symmetry and associated with varying degrees of cation-anion interaction. N-methyl ligand substituents contribute significantly to ligand conformations, complex symmetry, and cation-anion steric interactions. From the electronic data, the parametersDq,B,C,C/B, ₃₅, andZ* are determined for each complex and a spectrochemical and nephelauxetic series is proposed for the associated amine ligands.

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Infrarot- und elektronenspektroskopische Untersuchungen einer Reihe von Nickel(II)-Amin-Komplexen

Zusammenfassung Die qualitative Auswertung von Daten aus Infrarot- und Elektronenspektroskopie von Nickel(II)-Amin-Komplexen erlaubte die Zuordnung einer oktaedrischen (trans-tetragonalen) Symmetrie mit verschieden abgestuften Kation-Anion-Wechselwirkungen. Substituenten am N-Methyl-Liganden tragen signifikant zur Ligandenkonformation, Komplexsymmetrie und Kation-Anion-Wechselwirkung bei. Aus den elektronenspektroskopischen Daten wurden die ParameterDq,B,C,C/B, ₃₅ undZ* für jeden Komplex bestimmt und als Kriterium für eine Reihung der Aminliganden herangezogen.

     

FT-IR spectroscopic investigation of transition metal (II) 2-aminopyridine tetracyanonickelate complexes

A series of Hofmann-type clathrate host molecules containing two 2-aminopyridine (2-Apy) groups attached to transition metal (II) (M) tetracyanonickelate frame, with the formula: M(2Apy)₂Ni(CN)₄ (where M=Mn, Co, Cu or Zn), have been synthesised for the first time. Their FT-IR spectra are reported in the 400–4000 cm⁻¹ region. The spectral features suggest that the compounds are substantially isostructural to that of already known Hofmann type pyridine complex; M(py)₂Ni(CN)₄. Moreover, 2Apy pyridine molecules are found to involve coordination through the ring nitrogen. The coordination effect on the 2Apy modes was analysed.     

Picosecond X-ray absorption spectroscopy of a photoinduced iron(II) spin crossover reaction in solution

In this study, we perform steady-state and time-resolved X-ray absorption spectroscopy (XAS) on the iron K-edge of [Fe(tren(py)3)](PF6)2 dissolved in acetonitrile solution. Static XAS measurements on the low-spin parent compound and its high-spin analogue, [Fe(tren(6-Me-py)3)](PF6)2, reveal distinct spectroscopic signatures for the two spin states in the X-ray absorption near-edge structure (XANES) and in the X-ray absorption fine structure (EXAFS). For the time-resolved studies, 100 fs, 400 nm pump pulses initiate a charge-transfer transition in the low-spin complex. The subsequent electronic and geometric changes associated with the formation of the high-spin excited state are probed with 70 ps, 7.1 keV, tunable X-ray pulses derived from the Advanced Light Source (ALS). Modeling of the transient XAS data reveals that the average iron-nitrogen (Fe-N) bond is lengthened by 0.21+/-0.03 A in the high-spin excited state relative to the ground state within 70 ps. This structural modification causes a change in the metal-ligand interactions as reflected by the altered density of states of the unoccupied metal orbitals. Our results constitute the first direct measurements of the dynamic atomic and electronic structural rearrangements occurring during a photoinduced FeII spin crossover reaction in solution via picosecond X-ray absorption spectroscopy.     

High-field EPR investigation of a series of mononuclear Mn(II) complexes doped into Zn(II) hosts

The five-coordinate mono-halide mononuclear Zn(II) complexes [Zn(tpa)X]⁺ (tpa = tris(2-pyridylmethyl)amine; X = I ([Zn(tpa)I]I; 1a), Br ([Zn(tpa)Br](ZnBr₄)_0.5; 2a) and Cl ([Zn(tpa)Cl](ZnCl₄)_0.5; 3a)) and the six-coordinate mononuclear complex [Zn(tpa)(NCS)₂] (4a) have been synthesized and characterized by X-ray crystallography. The [Zn(tpa)X]⁺ complexes doped with the corresponding [Mn(tpa)X₂] complexes (X = I (1b), Br (2b) and Cl (3b)) have been synthesized and their electronic properties investigated by multifrequency high field EPR (HF-EPR) (95–285 GHz). The magnetically diluted conditions allow the determination of the hyperfine coupling constant A (A = 68.10⁻⁴ cm⁻¹ for 1b–3b). The zero-field splitting parameters (D and E) found for 1b–3b are comparable to those found for neat samples of the [Mn(tpa)X₂] complexes (1b: D = 0.635 cm⁻¹, E/D = 0.189; 2b: D = 0.360 cm⁻¹, E/D = 0.192; 3b: D = 0.115 cm⁻¹, E/D = 0.200). The efficacy of using multifrequency EPR under dilute conditions to precisely determine spin Hamiltonian parameters is discussed.     

Cu(II) and Zn(II) complexes with a fluoroquinolone antibiotic: Spectroscopic and X-ray absorption characterization

The synthesis of two complexes with the antibiotic flumequine, [Cu(Flumequine)₂(OH₂)₂] (1) and [Zn(Flumequine)₂(OH₂)₂]·H₂O (2) is reported. Their molecular structure was elucidated by combining various spectroscopic techniques. The EPR parameters combined with XAS data underline a tetragonal distorted octahedral geometry for the two complexes. The coordination occurs through the carbonyl and carboxylate oxygen atoms in the equatorial plane. The coordination sphere is completed by two water molecules in axial position.     

Structural, spectroscopic, and electrochemical properties of a series of high-spin thiolatonickel(II) complexes

A series of high-spin thiolatonickel(II) complexes, [PhTttBu]Ni(SR) (PhTttBu = phenyltris((tert-butylthio)methyl)borate; 2, R = triphenylmethyl; 3, R = pentafluorophenyl; 4, R = phenyl), were synthesized via the reaction of [PhTttBu]Ni(NO3) (1) with thiols (RSH) in the presence of triethylamine. The [PhTttBu]Ni(SR) products were isolated and characterized by various physicochemical measurements including X-ray diffraction analyses. These thiolatonickel(II) complexes have a distorted trigonal pyramidal geometry with somewhat different tau values: 0.80 and 0.90 for two crystalline phases of 2, 0.74 for 3, and 0.69 for 4, where tau is a normalized measure of pyramidalization (tau = 0 for tetrahedron, tau = 1 for trigonal pyramid). The electronic absorption spectra display characteristic sulfur-to-nickel(II) charge transfer (CT) bands at 532 nm (7500 M(-1) cm(-1)) for 2, 510 nm (4800 M(-1) cm(-1)) for 3, and 569 nm (4100 M(-1) cm(-1)) for 4. The cyclic voltammograms show a quasi-reversible redox couple at E1/2 = -1.11 V for 2, and reversible redox couples at E1/2 = -1.03 V for 3 and E1/2 = -1.17 V for 4 (vs Fc+/Fc). Correlation between the tau value and the CT intensity was observed: the strong CT intensity results from the high tau value, which provides for strong orbital overlap (2 > 3 > 4). Additionally, the CT transition energy correlates with the reduction potential: both the CT transition energy and potential decrease in the order 3 > 2 > 4, consistent with the influence of decreasing electron withdrawing abilities, R = pentafluorophenyl > triphenylmethyl > phenyl. The three thiolatonickel complexes exhibit dramatically different thermal stabilities. Complex 4 is the least stable, undergoing decomposition to [kappa2-PhBttBuSPh]Ni(eta2-CH2SBut) (5) via net exchange of Ni-SPh and B-CH2SBut groups.     

Structure of iron (II) and cobalt (II) bromide complexes in aqueous solution by X-ray diffraction analysis

Structures of bromo-metal complexes in concentrated aqueous solutions of FeBr₂ and of CoBr₂ were investigated by X-ray diffraction analysis. The complexes possess an octahedral geometry coordinating Br^– along with H₂O ligands. The frequency factors of metal-Br contacts per one atom of metal were 0.325 for the 2.7M (mol-dm^–3) and 0.747 for the 4.5M FeBr₂ solutions, and 0.280 for the 2.8M and 0.595 for the 4.3M CoBr₂ solutions. The frequency factors suggested that the tendency of metal ions to forming monobromo complexes is in the order, Fe>Co>Ni相似文献   

A novel series of nickel(II)-dppe-arylazoimidazole complexes. Synthesis and spectroscopic characterization

Reaction of [Ni(dppe)Cl₂/Br₂] with AgOTf in CH₂Cl₂ medium following ligand addition leads to [Ni(dppe)(OSO₂CF₃)₂] and then [Ni(dppe)(RaaiR)](OSO₂CF₃)₂ [RaaiR′ = p–R–C₆H₄–N=N–C₃H₂–NN-1–R′,(1–3), abbreviated as N,N′-chelator, where N(imidazole) and N(azo) represent N and N′, respectively; R = H (a), Me (b), Cl (c) and R′ = Me (1), CH₂CH₃ (2), CH₂Ph (3), OSO₂CF₃ is the triflate anion]. ³¹P{¹H}-NMR confirm that stable bis-chelated square planar Ni(II) azoimine–dppe complex formation with one sharp peaks. The ¹H NMR spectral measurements suggest azoimine link is present with lot of phenyl protons in the aromatic region. Considering all the moities there are a lot of different carbon atoms in the molecule which gives many different peaks in the ¹³C(¹H)-NMR spectrum. In the ¹H-¹H COSY spectrum in the present complexes and contour peaks in the ¹H-¹³C-HMQC spectrum in the present complexes, assign the solution structure and stereoretentive conformation in each complexes.     

X-ray absorption fine structure spectroscopic studies of Octakis(DMSO)lanthanoid(III) complexes in solution and in the solid iodides

Octakis(DMSO)lanthanoid(III) iodides (DMSO = dimethylsulfoxide), [Ln(OS(CH3)2)8]I3, of most lanthanoid(III) ions in the series from La to Lu have been studied in the solid state and in DMSO solution by extended X-ray absorption fine structure (EXAFS) spectroscopy. L3-edge and also some K-edge spectra were recorded, which provided mean Ln-O bond distances for the octakis(DMSO)lanthanoid(III) complexes. The agreement with the average of the Ln-O bond distances obtained in a separate study by X-ray crystallography was quite satisfactory. The crystalline octakis(DMSO)lanthanoid(III) iodide salts have a fairly broad distribution of Ln-O bond distances, ca. 0.1 A, with a few disordered DMSO ligands. Their EXAFS spectra are in excellent agreement with those obtained for the solvated lanthanoid(III) ions in DMSO solution, both of which show slightly asymmetric distributions of the Ln-O bond distances. Hence, all lanthanoid(III) ions are present as octakis(DMSO)lanthanoid(III) complexes in DMSO solution, with the mean Ln-O distances centered at 2.50 (La), 2.45 (Pr), 2.43 (Nd), 2.41 (Sm), 2.40 (Eu), 2.39 (Gd), 2.37 (Tb), 2.36 (Dy), 2.34 (Ho), 2.33 (Er), 2.31 (Tm), and 2.29 A (Lu). This decrease in the Ln-O bond distances is larger than expected from the previously established ionic radii for octa-coordination. This indicates increasing polarization of the LnIII-O(DMSO) bonds with increasing atomic number. However, the S(1s) electron transition energies in the sulfur K-edge X-ray absorption near-edge structure (XANES) spectra, probing the unoccupied molecular orbitals of lowest energy of the DMSO ligands for the [Ln(OS(CH3)2)8](3+) complexes, change only insignificantly from Ln = La to Lu. This indicates that there is no appreciable change in the sigma-contribution to the S-O bond, probably due to a corresponding increase in the contribution from the sulfur lone pair to the bonding.     

X-ray diffraction and NMR studies on a series of Binap-based Ru(II) hydroxyphosphine pi-arene complexes

A series of new Ru(II) arene phosphine complexes derived from Binap have been prepared. Specifically, reaction of Ru(OAc)(2)(Binap) with 3,5-(CF(3))(2)C(6)H(3))(4)B (BArF).H(OEt(2))(2), is shown to afford new mono- and dinuclear Ru(II) hydroxyphosphine pi-arene complexes via a series of P-C bond cleavage reactions. The dinuclear Ru(II) pi-arene complexes contain bridging P(O)(OH)(2) ligands. Crystal structures of five new complexes are reported and suggest an eta(4)-arene rather than an eta(6)-arene coordination mode. However, in solution, their (13)C NMR data are more consistent with a strongly distorted eta(6)-coordination mode. PGSE (1)H and (19)F diffusion measurements on the dinuclear complexes suggest hydrogen bonding of the triflate anion and ion-pairing of the BArF(-) anion.     

Thermal and spectroscopic investigation of new binuclear Pt(II) complexes with carboxylic acids

The thermal decomposition of the binuclear Pt(II) complexes with acetate, propionate, valerate and izovalerate ligands were studied by TG and DTA techniques. The Pt(II) complex with acetic acid (PtAA) was stable up to 343.15 K, Pt(II) complex with propionic acid (PtPrA) was stable up to 323.15 K, Pt(II) complex with valeric acid (PtVA) was stable up to T=313.15 K and Pt(II) complex with isovaleric acid (PtIvA) was stable up to 408.15 K. The PtAA complex was investigated again after a year by thermogravimetric analysis. After the thermal decomposition of the Pt(II) complexes with carboxylic acids, only in the PtVA complex and PtAA complex (investigated after a year) the final residue contains only platinum, while in the rest complexes the solid residue was a mixture of platinum and platinum carbides (PtC₂, Pt₂C₃).