DDT Polymorphism and the Lethality of Crystal Forms

DDT (1,1,1‐trichloro‐2,2‐bis(4‐chlorophenyl)ethane), a contact insecticide with a rich and controversial history since its activity was discovered in 1939, has long been thought to be monomorphic. Herein we report the discovery and characterization of a second polymorph, designated Form II, which can be isolated as single crystals, but converts very slowly at room temperature to the form reported previously, now designated as Form I. Computations based on an evolutionary algorithm for crystal structure prediction revealed that Forms I and II are among the four lowest energy crystal structures of fifty calculated. A preliminary study of the contact insecticidal activity toward fruit flies (Drosophila melanogaster) indicates that Form II is more active, suggesting opportunities for more effective solid‐state formulations that would allow reduced amounts of DDT, thereby minimizing environmental impact.     

Formation of Mixed Ionic Complementary Peptide Fibrils

Summary: Two peptides (FEFEFKFK and HHHHHHFEFEFKFK) have been synthesised and their phase diagrams mapped out as a function of concentration and temperature. Both peptides formed self-supporting fibrillar hydrogels above a similar critical molar gelation concentration with a fibril diameter corresponding to the length of the fully stretched monomer. Mixing the peptides in a 9:1 ratio of FEFEFKFK to histadine functionalized FEFEFKFK in the presence of nanogold particles (binds to the histadine groups) resulted in thicker fibres suggesting that two fibrils associate together to form a fibre. TEM studies revealed that the gold particles were distributed throughout the hydrogel and adjacent to both sides of the fibrillar structures with an average distance between particles of 21 nm. It is postulated that the peptides form anti-parallel beta sheet fibrils that associate together via π-stacking interactions between the imidazole side chains of the histadine groups to form a fibre, where on average 1 in every 44 peptides is functionalized.     

The Dominant Role of Oxygen in Modulating the Chemical Evolution Pathways of Tyrosine in Peptides: Dityrosine or Melanin

In diverse biological systems, the oxidation of tyrosine to melanin or dityrosine is crucial for the formation of crosslinked proteins and thus for the realization of their structural, biological, and photoactive functionalities; however, the predominant factor in determining the pathways of this chemical evolution has not been revealed. Herein, we demonstrate for tyrosine‐containing amino acid derivatives, peptides, and proteins that the selective oxidation of tyrosine to produce melanin or dityrosine can be readily realized by manipulating the oxygen concentration in the reaction system. This oxygen‐dependent pathway selection reflects the selective chemical evolution of tyrosine to dityrosine and melanin in anaerobic and aerobic microorganisms, respectively. The resulting melanin‐ and dityrosine‐containing nanomaterials reproduce key functions of their natural counterparts with respect to their photothermal and photoluminescent characteristics, respectively. This work reveals the plausible role of oxygen in the chemical evolution of tyrosine derivatives and provides a versatile strategy for the rational design of tyrosine‐based multifunctional biomaterials.     

Polymorphism of l‐Tryptophan

A new polymorph of l ‐tryptophan was prepared through crystallization from the gas phase, with structure determination carried out directly from powder XRD data augmented by periodic DFT‐D calculations. The new polymorph (denoted β) and the previously reported polymorph (denoted α) are both based on alternating hydrophilic and hydrophobic layers, but with substantially different hydrogen‐bonding arrangements. The β polymorph exhibits the energetically favourable l 2‐l 2 hydrogen‐bonding arrangement, which is unprecedented for amino acids with aromatic side chains. The specific molecular conformations adopted in the β polymorph facilitate this hydrogen‐bonding scheme while avoiding steric conflict of the side chains.     

ɛ‐TiO,a Novel Stable Polymorph of Titanium Monoxide

For the Ti/O system, three titanium monoxide (TiO) phases (α, β, and γ) with defective NaCl‐type structures and a high‐temperature hexagonal phase (H) have been known for decades. In this work, single crystals of a novel polymorph, ɛ‐TiO, were synthesized by using a bismuth flux. X‐ray diffraction (XRD) revealed a hexagonal crystal structure (a=4.9936(3) Å, c=2.8773(2) Å, P 2m) that is isotypic with ɛ‐TaN. While the Ti atoms are surrounded by trigonal prismatic (sixfold coordination) and trigonal planar (threefold coordination) arrangements of O atoms, the O atoms are found in a pseudo‐square‐pyramidal arrangement of Ti atoms. First‐principles calculations of the formation enthalpy and the electron and phonon density of states and crystal orbital Hamilton population (COHP) analysis revealed that ɛ‐TiO is more stable than α‐TiO, which had previously been regarded as the most stable phase at low temperatures.     

Design of Multicomponent Peptide Fibrils with Ordered and Programmable Compositional Patterns

Advanced applications of biomacromolecular assemblies require a stringent degree of control over molecular arrangement, which is a challenge to current synthetic methods. Here we used a neighbor-controlled patterning strategy to build multicomponent peptide fibrils with an unprecedented capacity to manipulate local composition and peptide positions. Eight peptides were designed to have regulable nearest neighbors upon co-assembly, which, by simulation, afforded 412 different patterns within fibrils, with varied compositions and/or peptide positions. The fibrils with six prescribed patterns were experimentally constructed with high accuracy. The controlled patterning also applies to functionalities appended to the peptides, as exemplified by arranging carbohydrate ligands at nanoscale precision for protein recognition. This study offers a route to molecular editing of inner structures of peptide assemblies, prefiguring the uniqueness and richness of patterning-based material design.     

Synthesis of Layered Carbonitrides from Biotic Molecules for Photoredox Transformations

The construction of layered covalent carbon nitride polymers based on tri-s-triazine units has been achieved by using nucleobases (adenine, guanine, cytosine, thymine and uracil) and urea to establish a two-dimensional semiconducting structure that allows band-gap engineering applications. This biomolecule-derived binary carbon nitride polymer enables the generation of energized charge carrier with light-irradiation to induce photoredox reactions for stable hydrogen production and heterogeneous organosynthesis of C−O, C−C, C−N and N−N bonds, which may enrich discussion on chemical reactions in prebiotic conditions by taking account of the photoredox function of conjugated carbonitride semiconductors that have long been considered to be stable HCN-derived organic macromolecules in space.     

Manipulation of Molecular Aggregation States to Realize Polymorphism,AIE, MCL,and TADF in a Single Molecule

Multifunctional emitting materials are scarce and need to be further explored. Now, a newly anthraquinone derivative, 2‐(phenothiazine‐10‐yl)‐anthraquinone (PTZ‐AQ) was designed and synthesized and found to demonstrate polymorphism, multi‐color emission, aggregation‐induced emission (AIE), mechanochromic luminescence (MCL), and thermally activated delayed fluorescence (TADF) in its different solid forms. It is shown for the first time that TADF properties of a compound can be systematically tuned via its aggregation state. The optimized PTZ‐AQ crystal shows a small singlet–triplet energy splitting of 0.01 eV and exhibits red TADF with a photoluminescence quantum yield as high as 0.848. This study shows that the unique multiple functions can be integrated into one single compound through controlling the aggregation states, which provides a new strategy for the investigation and application of multifunctional organic materials.     

Examining the Influence of Phosphorylation on Peptide Ion Structure by Ion Mobility Spectrometry-Mass Spectrometry

Ion mobility spectrometry-mass spectrometry (IMS-MS) techniques are used to study the general effects of phosphorylation on peptide structure. Cross sections for a library of 66 singly phosphorylated peptide ions from 33 pairs of positional isomers, and unmodified analogues were measured. Intrinsic size parameters (ISPs) derived from these measurements yield calculated collision cross sections for 85% of these phosphopeptide sequences that are within ±2.5% of experimental values. The average ISP for the phosphoryl group (0.64 ± 0.05) suggests that in general this moiety forms intramolecular interactions with the neighboring residues and peptide backbone, resulting in relatively compact structures. We assess the capability of ion mobility to separate positional isomers (i.e., peptide sequences that differ only in the location of the modification) and find that more than half of the isomeric pairs have >1% difference in collision cross section. Phosphorylation is also found to influence populations of structures that differ in the cis/trans orientation of Xaa–Pro peptide bonds. Several sequences with phosphorylated Ser or Thr residues located N-terminally adjacent to Pro residues show fewer conformations compared to the unmodified sequences.

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Influence of Carbon Black on Conductivity and Structure of Polyethylene Oxide Based Polymer Electrolyte Film

The potential applications of carbon black are expected to grow as science and technology improve offering up new possibilities for innovation throughout disciplines included in the field of energy storage. The present work shows the influence of carbon black to improve the ionic conductivity of the polymer electrolyte. The synthesis of polyethylene oxide: ammonium iodide based polymer electrolyte incorporated with carbon black varying from 0.01 to 0.06 wt% with respect to PEO: NH4I system by solution casting method. Different characterizations like polarized optical microscopy (POM), impedance spectroscopy, and ionic transference number (t_ion) are studied in detail. The maximum ionic conductivity is achieved at 0.05 wt% carbon black shows 1.20 × 10⁻⁵ S cm⁻¹ at ambient temperature. In accordance with POM data, the amorphous region has increased whereas the crystalline region has shrunk which further indicated the increase in ionic conductivity . The value of (t_ion) is calculated to be 0.97 which shows the system is ionic in nature. PEO based polymer electrolyte doped carbon black can be used for the fabrication of energy storage devices.     

Polymorphism of Amyloid Fibrils Induced by Catalytic Seeding: A Vibrational Circular Dichroism Study

Amyloidal protein fibrils occur in many biological events, but their formation and structural variability are understood rather poorly. We systematically explore fibril polymorphism for polyglutamic acid (PGA), insulin and hen egg white lysozyme. The fibrils were grown in the presence of “seeds”, that is fibrils of the same or different protein. The seeds in concentrations higher than about 5 % of the total protein amount fully determined the structure of the final fibrils. Fibril structure was monitored by vibrational circular dichroism (VCD) spectroscopy and other techniques. The VCD shapes significantly differ for different fibril samples. Infrared (IR) and VCD spectra of PGA were also simulated using density functional theory (DFT) and a periodic model. The simulation provides excellent basis for data interpretation and reveals that the spectral shapes and signs depend both on fibril length and twist. The understanding of fibril formation and interactions may facilitate medical treatment of protein misfolding diseases in the future.     

基于多肽结构的聚合物水凝胶

多肽由于具有良好的生物相容性和生物可降解性、生物活性以及自组装特性, 近年来受到了广泛的关注。将多肽自组装特性引入到聚合物中,可赋予聚合物形成凝胶性并对凝胶网络分子结构做出一定控制,进而使凝胶具有如环境响应、力学可调等结构控制性能;将特殊功能性多肽引入到化学交联的聚合物凝胶网络中,可赋予水凝胶生物功能性,如细胞黏附、酶降解、抗菌等;将多肽的凝胶网络构建、结构控制作用以及功能性同时引入获得的物理/化学双重交联凝胶不仅赋予水凝胶一定的功能性,且多肽自组装贡献的物理交联结构还能对化学交联凝胶网络起增强作用。本文综述了基于多肽自组装的物理交联聚合物水凝胶、多肽功能化的化学交联聚合物水凝胶以及基于多肽的物理/化学双重交联的聚合物水凝胶,并展望了这些水凝胶的发展前景。     

Strong and Ultra-tough Ionic Hydrogel Based on Hyperbranched Macro-Cross-linker: Influence of Topological Structure on Properties

The application of hydrogels often suffers from their inherent limitation of poor mechanical properties. Here, a carboxyl-functionalized and acryloyl-terminated hyperbranched polycaprolactone (PCL) was synthesized and used as a macro-cross-linker to fabricate a super strong and ultra-tough ionic hydrogel. The terminal acryloyl groups of hyperbranched PCL are chemically incorporated into the network to form covalent cross-links, which contribute to robust networks. Meanwhile, the hydrophobic domains formed by the spontaneous aggregation of PCL chains and coordination bonds between Fe³⁺ and COO⁻ groups serve as dynamic non-covalent cross-links, which enhance the energy dissipation ability. Especially, the influence of the hyperbranched topological structure of PCL on hydrogel properties has been well investigated, exhibiting superior strengthening and toughening effects compared to the linear one. Moreover, the hyperbranched PCL cross-linker also endowed the ionic hydrogel with higher sensitivity than the linear one when used as a strain sensor. As a result, this well-designed ionic hydrogel possesses high mechanical strength, superior toughness, and well ionic conductivity, exhibiting potential applications in the field of flexible strain sensors.     

Targeting the Genome‐Stability Hub Ctf4 by Stapled‐Peptide Design

The exploitation of synthetic lethality by small‐molecule targeting of pathways that maintain genomic stability is an attractive chemotherapeutic approach. The Ctf4/AND‐1 protein hub, which links DNA replication, repair, and chromosome segregation, represents a novel target for the synthetic lethality approach. Herein, we report the design, optimization, and validation of double‐click stapled peptides encoding the Ctf4‐interacting peptide (CIP) of the replicative helicase subunit Sld5. By screening stapling positions in the Sld5 CIP, we identified an unorthodox i,i+6 stapled peptide with improved, submicromolar binding to Ctf4. The mode of interaction with Ctf4 was confirmed by a crystal structure of the stapled Sld5 peptide bound to Ctf4. The stapled Sld5 peptide was able to displace the Ctf4 partner DNA polymerase α from the replisome in yeast extracts. Our study provides proof‐of‐principle evidence for the development of small‐molecule inhibitors of the human CTF4 orthologue AND‐1.     

The Influence of Two‐Dimensional Organization on Peptide Conformation

Molecular crowding plays a significant role in regulating molecular conformation in cellular environments. It is also likely to be important wherever high molecular densities are required, for example in surface‐phase studies, in which molecular densities generally far exceed those observed in solution. Using on‐surface circular dichroism (CD) spectroscopy, we have investigated the structure of a synthetic peptide assembled into a highly packed monolayer. The immobilized peptide undergoes a structural transition between α‐helical and random coil conformation upon changes in pH and ionic concentration, but critically the threshold for conformational change is altered dramatically by molecular crowding within the peptide monolayer. This study highlights the often overlooked role molecular crowding plays in regulating molecular structure and function in surface‐phase studies of biological molecules.