Development and optimization of porphyrin gas sensing LB films

A series of meso-substituted metal-free porphyrins has been developed which show high sensitivity to NO2 gas in the sub-5 ppm concentration range. By selecting different substituents, it has been possible to improve in a systematic manner the response time and sensitivity of the porphyrin LB film to NO2. Initially, a sulphonamino substituent yielded a fairly long response time of around 450 s but this was shortened considerably when this substituent was changed for a stearamido group. Further modifications resulted in achieving a porphyrin LB film which exhibited a t50 response time of only 11 s. By using an optically inert calixarene host material in which the porphyrin guest was incorporated, it was possible to obtain t50 values as low as 5 s.     

Influence of an extremely negatively charged porphyrin on the reversible binding kinetics of NO to Fe(III) and the subsequent reductive nitrosylation

The polyanionic, water-soluble, and non-micro-oxo dimer-forming iron porphyrin (hexadecasodium iron 54,104,154,204-tetra-t-butyl-52,56,102,106,152,156,202,206-octakis[2,2-bis(carboxylato)ethyl]-5,10,15,20-tetraphenylporphyrin), (P16-)FeIII, with 16 negatively charged meso substituents on the porphyrin was synthesized and fully characterized by UV-vis and 1H NMR spectroscopy. A single pKa1 value of 9.90 +/- 0.01 was determined for the deprotonation of coordinated water in the six-coordinate (P16-)FeIII(H2O)2 and as attributed to the formation of the five-coordinate monohydroxo-ligated form, (P16-)FeIII(OH). The porphyrin complex reversibly binds NO in aqueous solution to yield the nitric oxide adduct, (P16-)FeII(NO+)(L), where L = H2O or OH-. The kinetics for the reversible binding of NO were studied as a function of pH, temperature, and pressure using the stopped-flow technique. The data for the binding of NO to the diaqua complex are consistent with the operation of a dissociative mechanism on the basis of the significantly positive values of DeltaS and DeltaV, whereas the monohydroxo complex favors an associatively activated mechanism as determined from the corresponding negative activation parameters. The rate constant, kon = 3.1 x 104 M-1 s-1 at 25 degrees C, determined for the NO binding to (P16-)FeIII(OH) at higher pH, is significantly lower than the corresponding value measured for (P16-)FeIII(H2O)2 at lower pH, namely, kon = 11.3 x 105 M-1 s-1 at 25 degrees C. This decrease in the reactivity is analogous to that reported for other diaqua- and monohydroxo-ligated ferric porphyrin complexes, and is accounted for in terms of a mechanistic changeover observed for (P16-)FeIII(H2O)2 and (P16-)FeIII(OH). The formed nitrosyl complex, (P16-)FeII(NO+)(H2O), undergoes subsequent reductive nitrosylation to produce (P16-)FeII(NO), which is catalyzed by nitrite produced during the reaction. Concentration-, pH-, temperature-, and pressure-dependent kinetic data are reported for this reaction. Data for the reversible binding of NO and the subsequent reductive nitrosylation reaction are discussed in reference to that available for other iron(III) porphyrins in terms of the influence of the porphyrin periphery.     

Biosorption of Cr(VI) ions from aqueous solutions: kinetics, equilibrium, thermodynamics and desorption studies

Cr(VI) is a major water pollutant from industrial effluent whose concentration is to be reduced within the permissible limit. Present study reports a systematic evaluation of six different natural adsorbents for the removal of Cr(VI) from aqueous solutions in batch process. The adsorption kinetic data were best described by pseudo-second order model. The values of mass transfer coefficient for Cr(VI) adsorption indicated that the velocity of the adsorbate transport from the bulk to the solid phase was quite fast. The effective diffusivity of Cr(VI) removal for all the adsorbents were of the order of 10(-10) m(2)/s which suggested chemisorption of the process. The adsorption process was jointly controlled by film diffusion and intraparticle diffusion. Maximum monolayer adsorption capacities onto the natural adsorbents used were comparable to the other natural adsorbents used by other researchers. The thermodynamic studies and sorption energy calculation using Dubinin-Radushkevich isotherm model indicated that the adsorption processes were endothermic and chemical in nature. FT-IR studies were carried out to understand the type of functional groups responsible for Cr(VI) binding process. Desorption study was carried out with different concentration of NaOH solutions. Application study was carried out using electroplating industrial wastewater.     

Adsorption of Basic Magenta II onto H2SO4 activated immature Gossypium hirsutum seeds: Kinetics,isotherms, mass transfer,thermodynamics and process design

The adsorption of Basic Magenta II onto H₂SO₄ activated immature Gossypium hirsutum seeds was analysed using Ho, modified Freundlich, Sobkowsk–Czerwi, Blanchard, Elovich, Avrami, and modified Ritchie kinetic models by nonlinear regression-sum of normalized errors analysis. The goodness of fit was evaluated with coefficient of determination and root mean square error. The good agreement of experimental data to Avrami second-order model indicated that the mechanism of adsorption followed multiple kinetic orders. The Avrami second-order mechanism was applied to predict the rate constant of sorption and the equilibrium capacity and subsequently the obtained equilibrium adsorption capacities were utilized to find the equilibrium concentrations. Langmuir, Freundlich, Temkin, Sips and Hill isotherms were investigated to understand the nature of adsorption with the help of nonlinear regression analysis. Both Sips and Hill isotherms were best fit to the adsorption equilibrium data showing the homogeneous adsorption on the heterogeneous surface of carbon and the positive co-operative manifestations of the Basic Magenta II molecules. The mass transfer study depicted the details such as mass transfer coefficient, intra-particle diffusion rate, pore diffusion coefficient, and film diffusion coefficient. The adsorption process was found to be controlled by film diffusion. The thermodynamic parameters like, Gibbs free energy change, enthalpy change, entropy change and isosteric heat of adsorption confirmed the endothermic, feasible and spontaneous nature of adsorption. A single stage batch adsorber was designed using Sips isotherm constants to estimate the amount of carbon required for desired purification.     

Electronic structure and spectra of nitrosyl complexes with cobalt and manganese porphyrins

The DFT calculations for nitrosyl manganese and cobalt porphyrins were carried out with the use of several density functionals. The binding energy of nitrosyl ligand and spin state of nitrosyl-free manganese porphyrin were determined. The best values of binding energy are obtained from the OLYP functional. The NBO analysis of metal?Cnitrosyl bonding was performed. Electronic spectra of nitrosyl cobalt and manganese porphyrin were calculated with the TDDFT method. The calculated electronic transitions agree well with the experimental data except for the Soret band of (Por)Mn(NO), where they are 0.3?C0.5?eV higher in energy than the experimental ones.     

A one-electron model for the aqueous electron that includes many-body electron-water polarization: Bulk equilibrium structure, vertical electron binding energy, and optical absorption spectrum

Previously, we reported an electron-water pseudopotential designed to be used in conjunction with a polarizable water model, in order to describe the hydrated electron [L. D. Jacobson et al., J. Chem. Phys. 130, 124115 (2009)]. Subsequently, we found this model to be inadequate for the aqueous electron in bulk water, and here we report a reparametrization of the model. Unlike the previous model, the current version is not fit directly to any observables; rather, we use an ab initio exchange-correlation potential, along with a repulsive potential that is fit to reproduce the density maximum of the excess electron's wave function within the static-exchange approximation. The new parametrization performs at least as well as the previous model, as compared to ab initio benchmarks for (H(2)O)(n) (-) clusters, and also predicts reasonable values for the diffusion coefficient, radius of gyration, and absorption maximum of the bulk species. The new model predicts a vertical electron binding energy of 3.7 eV in bulk water, which is 1.4 eV smaller than the value obtained using nonpolarizable models; the difference represents the solvent's electronic reorganization energy following electron detachment. We find that the electron's first solvation shell is quite loose, which may be responsible for the electron's large, positive entropy of hydration. Many-body polarization alters the electronic absorption line shape in a qualitative way, giving rise to a high-energy tail that is observed experimentally but is absent in previous simulations. In our model, this feature arises from spatially diffuse excited states that are bound only by electronic reorganization (i.e., solvent polarization) following electronic excitation.     

Low-pressure DC air plasmas. investigation of neutral and ion chemistry

The neutral and charged species present in a direct current (dc) hollow cathode, gas flow, air reactor are experimentally studied by quadrupole mass spectrometry. The degree of ionization of the plasma and the electron mean temperature with decreasing air pressure, for constant discharge current, are measured with a double Langmuir probe. The chemical composition of the plasma changes appreciably over the 3 x 10(-3) to 5 x 10(-2) mbar range investigated: at the lowest pressures studied, O2 dissociation is up to 60% and the concentration of NO is half that of N2; concerning ions, NO+ and N2+ are dominant for the whole pressure range. A kinetic model of the plasma including electrons, neutrals, and positive ions is developed to account for the experimental observations; it is consistent with energy balance and predicts that heterogeneous processes are the main source of NO and that the contribution of ions to the global chemistry of neutrals is of minor significance even for the lowest pressures.     

Water‐sorption behaviors of poly(3,4′‐oxydiphenylene pyromellitimide) films depending on the thickness variation

The effect of film thickness on the water‐sorption behaviors of poly(3,4′‐oxydiphenylene pyromellitimide) (PMDA‐3,4′ODA) films was gravimetrically investigated and interpreted with a Fickian diffusion model in films. The diffusion coefficient increased with increasing film thickness, whereas the water uptake and the activation energy decreased. Overall, the water‐sorption behaviors of PMDA‐3,4′ODA films are strongly dependent on the changes in morphological structure, which originated from the variation in the film thickness. As the film thickness increased, the molecular in‐plane orientation decreased, consequently leading to the increased diffusion coefficient and decreased activation energy. In contrast, the water uptake decreased with increasing film thickness because of the increase in the out‐of‐plane packing order. The diffusion coefficient and activation energy were strongly dependent on the in‐plane orientation in the films. © 2001 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys 39: 669–676, 2001     

Efficient exciton transport in layers of self-assembled porphyrin derivatives

The photosynthetic apparatus of green sulfur bacteria, the chlorosome, is generally considered as a highly efficient natural light-harvesting system. The efficient exciton transport through chlorosomes toward the reaction centers originates from self-assembly of the bacteriochlorophyll molecules. The aim of the present work is to realize a long exciton diffusion length in an artificial light-harvesting system using the concept of self-assembled natural chlorosomal chromophores. The ability to transport excitons is studied for porphyrin derivatives with different tendencies to form molecular stacks by self-assembly. A porphyrin derivative denoted as ZnOP, containing methoxymethyl substituents ({meso-tetrakis[3,5-bis(methoxymethyl)phenyl]porphyrinato}zinc(II)) is found to form self-assembled stacks, in contrast to a derivative with tert-butyl substituents, ZnBuP ({meso-tetrakis[3,5-bis(tert-butyl)phenyl]porphyrinato}zinc(II)). Exciton transport and dissociation in a bilayer of these porphyrin derivatives and TiO2 are studied using the time-resolved microwave conductivity (TRMC) method. For ZnOP layers it is found that excitons undergo diffusive motion between the self-assembled stacks, with the exciton diffusion length being as long as 15 +/- 1 nm, which is comparable to that in natural chlorosomes. For ZnBuP a considerably shorter exciton diffusion length of 3 +/- 1 nm is found. Combining these exciton diffusion lengths with exciton lifetimes of 160 ps for ZnOP and 74 ps for ZnBuP yields exciton diffusion coefficients equal to 1.4 x 10(-6) m2/s and 1 x 10(-7) m2/s, respectively. The larger exciton diffusion coefficient for ZnOP originates from a strong excitonic coupling for interstack energy transfer. The findings show that energy transfer is strongly affected by the molecular organization. The efficient interstack energy transfer shows promising prospects for application of such self-assembled porphyrins in optoelectronics.     

Binding of CO, NO, and O2 to heme by density functional and multireference ab initio calculations

Using the CASSCF/CASPT2 approach, along with several DFT methods (PBE0, B3LYP, BP86, OLYP), we have investigated the bonding of CO, NO, and O2 molecules to two model heme systems: an iron(II) porphyrin with and without an axial imidazole ligand. The experimentally available binding energies are best reproduced by the CASPT2 method and with the OLYP functional. The other functionals considered perform much worse, either severely overbinding (BP86) or underbinding (B3LYP, PBE0). Significant discrepancies between the different density functionals are observed, not only for the energetics but sometimes also for structure predictions. This confirms our viewpoint that a balanced treatment of the electronic exchange and correlation is vital to describe the weak metal-ligand bond between heme and CO, NO, or O2. The binding energies DeltaEb were split into two contributions: the so-called spin-pairing energy DeltaE sp and the "inherent" binding energy DeltaEb0, and both contributions were analyzed in terms of method and basis set effects. We have also investigated the spin density distributions resulting from the bonding of the NO molecule (a noninnocent ligand) to heme. Our analysis at the DFT and CASSCF level shows that, while various density functionals predict qualitatively very different spin distributions, the CASSCF spin populations most closely correspond to the results obtained with the pure BP86 or OLYP rather than with the hybrid functionals.     

Electrochemically induced oxygen spillover and diffusion on Pt(111): PEEM imaging and kinetic modelling

Electrochemically induced oxygen spillover and diffusion in the Pt(O(2))|YSZ system is investigated in a combined experimental and theoretical study. The spreading of spillover oxygen is imaged by photoelectron emission microscopy (PEEM) on dense and epitaxial Pt(111) thin film electrodes prepared by pulsed laser deposition (PLD). Two different models are used to obtain surface diffusion coefficients from the experimental data, (i) an analytical solution of Fick's 2nd law of diffusion, and (ii) a numerical reaction-diffusion model that includes recombinative desorption of O(2) into the gas phase. The resulting diffusion coefficient has an activation energy of 50 kJ mol(-1) and a preexponential factor of 0.129 cm(2) s(-1) with an estimated uncertainty of ±20% for the activation energy and ±50% for the absolute value. The Fickian model slightly overpredicts diffusion coefficients due to the neglect of oxygen desorption. Experimental and theoretical results and limitations are discussed and compared to previous work.     

Reversible coagulation of colloidal suspension in shallow potential wells: Direct numerical simulation

Brownian dynamics computer simulations of aggregation in 2D colloidal suspensions are discussed. The simulations are based on the Langevin equations, pairwise interaction between colloidal particles and take into account Brownian, hydrodynamic and colloidal forces. The chosen mathematical model enables to predict the correct values of diffusion coefficient of freely moving particle, the mean value of kinetic energy for each particle in ensemble of interacting colloidal particles and residence times of colloidal particles inside the potential wells of different depths. The simulations allow monitoring formation and breakage of clusters in a suspension as well as time dependence of the mean cluster size. The article is published in the original.     

Study of Sorption of 2,4‐D on Outer Peristaltic Part of Waste Tire Rubber Granules

From this study it was evident that outer peristaltic parts of waste tire granules gave the highest removal. Film and pore diffusions are the major factors controlling rates of sorption from solution by porous adsorbents. For sorption of 2,4‐D on waste tire rubber granules, the sorption rate coefficient of second‐order kinetic equation was utilized indirectly to determine the rate‐limiting step. The diffusion coefficient lies in the scale of 10^?8 cm²/s, and the pore diffusion coefficient is in the range of 10^?9–10^?10 cm²/s. So both film and pore diffusion are rate limiting. Considering external mass transfer from fluid to particle, using the effect of initial concentration, and using the effect of adsorbent size, no conclusion was reached regarding rate‐controlling steps. It is apparent from the study that external mass transfer (film diffusion) as well as intra‐particle diffusion (pore diffusion) play significant roles in the sorption process for 2,4‐D removal from water onto rubber granules.     

Kinetics of film formation by interfacial polycondensation

An approximate analytical model of film formation by interfacial polycondensation is presented. The analysis requires knowledge of a minimal set of certain kinetic parameters (monomer diffusivities and reaction rate constants) and reaction conditions (monomer concentrations and thickness of the unstirred layer). The process proceeds as a succession of two or three markedly different kinetic regimes. Each regime (insipient film formation, slowdown, and diffusion-limited growth) sets a different pattern of local polymer accumulation, with important implications for the structure of the emerging film. At the incipient stage, a loose polymer film begins to emerge in a fixed narrow region inside the boundary layer, followed by gradual densification of the middle part of the film. A condition for film formation is thus formulated on the basis of our analysis. The model predicts that two different scenarios are possible, which depend on the permeability of the polymer: films with a low permeability to both monomers pass through an abrupt slowdown of film growth, whereas permeable films undergo a smooth transition between the incipient film formation and diffusion-limited regimes. The model incorporates the highly important effects of the accumulation of reactive end groups and the decrease of monomer diffusion with the polymer concentration on the kinetics of the process and film characteristics. In addition, the validity of the utilized mean-field approach is analyzed, and the analysis suggests a direct correlation between the roughness and the thickness of the film. The results are in good agreement with an earlier numerical study and the direct structural studies of polyamide membrane films.     

Light scattering measurement and theoretical interpretation of mutual diffusion coefficients in binary liquid mixtures

Mutual diffusion coefficients for eleven binary systems of simple organic liquids have been measured by laser light scattering. By separating the mutual diffusion coefficient into a kinetic diffusion coefficient and a thermodynamic factor, we have been able to analyze the dynamical information contained in the kinetic coefficient in terms of a simple hard sphere theory of molecular motion. The hard sphere model of the kinetic diffusion coefficient is shown to be accurate for ideal and moderately nonideal solutions, and for both spherical and very nonspherical molecules. Only for extremely nonideal solutions were we unable to interpret diffusion coefficient data by our methods of analysis.     

Adsorption, desorption, and diffusion of nitrogen in a model nanoporous material. II. Diffusion limited kinetics in amorphous solid water

The adsorption, desorption, and diffusion kinetics of N2 on thick (up to approximately 9 microm) porous films of amorphous solid water (ASW) films were studied using molecular beam techniques and temperature programmed desorption. Porous ASW films were grown on Pt(111) at low temperature (<30 K) from a collimated H2O beam at glancing incident angles. In thin films (<1 microm), the desorption kinetics are well described by a model that assumes rapid and uniform N2 distribution throughout the film. In thicker films (>1 microm), N2 adsorption at 27 K results in a nonuniform distribution, where most of N2 is trapped in the outer region of the film. Redistribution of N2 can be induced by thermal annealing. The apparent activation energy for this process is approximately 7 kJ/mol, which is approximately half of the desorption activation energy at the corresponding coverage. Preadsorption of Kr preferentially adsorbs onto the highest energy binding sites, thereby preventing N2 from trapping in the outer region of the film which facilitates N2 transport deeper into the porous film. Despite the onset of limited diffusion, the adsorption kinetics are efficient, precursor mediated, and independent of film thickness. An adsorption mechanism is proposed, in which a high-coverage N2 front propagates into a pore by the rapid transport of physisorbed second layer N2 species on top of the first surface bound layer.     

Synthesis and supramolecular self-assembly study of a novel porphyrin molecule in Langmuir and Langmuir-Blodgett films

The self-assembly and supramolecular engineering of porphyrins into ordered arrays have recently attracted much interest because of their promising application potential in molecular and electronic devices, spintronics, energy harvesting and storage, catalysis, and sensor development. We herein report the synthesis and supramolecular self-assembly study of a novel porphyrin molecule, 2Por-TAZ, in Langmuir and Langmuir-Blodgett films. The 2Por-TAZ molecule contains two porphyrin macrocycles attached to a triaminotriazine headgroup. Triaminotriazines are known to form a highly ordered linear supramolecular self-assembly through complementary hydrogen bonding with barbituric acid molecules at the air-water interface. Surface pressure-area isotherm measurements and polarized UV-vis absorption spectroscopic studies indicate that the 2Por-TAZ molecules adopted an edge-on orientation at the air-water interface. Polarized UV-vis absorption study also revealed that the 2Por-TAZ molecules formed linear supramolecular networks on pure water and barbituric acid subphase with porphyrin flat planes facing toward the compression direction. The binding of barbituric acid with 2Por-TAZ molecules was observed from the expansion of the Langmuir monolayer film. Compared to the transferred LB film from pure water subphase, both the UV-vis absorbance and fluorescence emission intensity of the LB film transferred from barbituric acid subphase increased significantly.     

Testing predictions of macroscopic binary diffusion coefficients using lattice models with site heterogeneity

Quantitatively predicting mass transport rates for chemical mixtures in porous materials is important in applications of materials such as adsorbents, membranes, and catalysts. Because directly assessing mixture transport experimentally is challenging, theoretical models that can predict mixture diffusion coefficients using only single-component information would have many uses. One such model was proposed by Skoulidas, Sholl, and Krishna (Langmuir, 2003, 19, 7977), and applications of this model to a variety of chemical mixtures in nanoporous materials have yielded promising results. In this paper, the accuracy of this model for predicting mixture diffusion coefficients in materials that exhibit a heterogeneous distribution of local binding energies is examined. To examine this issue, single-component and binary mixture diffusion coefficients are computed using kinetic Monte Carlo for a two-dimensional lattice model over a wide range of lattice occupancies and compositions. The approach suggested by Skoulidas, Sholl, and Krishna is found to be accurate in situations where the spatial distribution of binding site energies is relatively homogeneous, but is considerably less accurate for strongly heterogeneous energy distributions.     

Relating kinetic rates and local energetic roughness by accelerated molecular-dynamics simulations

We show that our accelerated molecular-dynamics (MD) approach can extend the time scale in all-atom MD simulations of biopolymers. We also show that this technique allows for the kinetic rate information to be recaptured. In deducing the kinetic rates, the relationship between the local energetic roughness of the potential-energy landscape and the effective diffusion coefficient is established. These are demonstrated on a very slow but important biomolecular process: the dynamics of cis-trans-isomerization of Ser-Pro motifs. We do not only recapture the slow kinetic rates, which is difficult in traditional MD, but also obtain the underlying roughness of the energy landscape of proteins at atomistic resolution.     

Electron kinetic energies from vibrationally promoted surface exoemission: evidence for a vibrational autodetachment mechanism

We report kinetic energy distributions of exoelectrons produced by collisions of highly vibrationally excited NO molecules with a low work function Cs dosed Au(111) surface. These measurements show that energy dissipation pathways involving nonadiabatic conversion of vibrational energy to electronic energy can result in electronic excitation of more than 3 eV, consistent with the available vibrational energy. We measured the dependence of the electron energy distributions on the translational and vibrational energy of the incident NO and find a clear positive correlation between final electron kinetic energy and initial vibrational excitation and a weak but observable inverse dependence of electron kinetic energy on initial translational energy. These observations are consistent with a vibrational autodetachment mechanism, where an electron is transferred to NO near its outer vibrational turning point and ejected near its inner vibrational turning point. Within the context of this model, we estimate the NO-to-surface distance for electron transfer.