Structural diversity in phosphoramidate’s chemistry: Syntheses,spectroscopic and X-ray crystallography studies

Novel phosphorus compounds of bisphosphoramidate, phosphoramidate and phosphoric triamide derivatives were synthesized using the starting materials PCl₅ and POCl₃. The products were then characterized by ¹H, ¹³C, ³¹P, ¹⁹F NMR, IR spectroscopy and CHN elemental analysis. It is noticeable that the reaction of 4-aminobenzamide with PCl₅ in different molar ratios yields different products, bisphosphoramides and phosphoric triamides. Moreover, we were taken by surprise that the interaction of POCl₃ with the first-type aromatic amines gave bisphosphoramidates with P–N–P linkages that exhibited ²J(P,P) ≈ 20.0 Hz in the ³¹P NMR spectra. In fact, two simple one-pot pathways are presented here for the synthesis of new bisphosphoramidates, and to the best of our knowledge these are the first instances of bisphosphoramidates that have been obtained up until now. The structures of compounds I (4-OCH₃–C₆H₄–CH₂–C₉H₁₃–NH₂Cl), 34 and 44 were further determined by X-ray crystallography. All of these structures produced three dimensional polymeric chains through strong- and weak hydrogen bonds. The presence of chiral aminoacidester moieties in the phosphoric triamides lead to chiral molecules that showed two sets of signals for the two groups. Interestingly, in phosphoric triamides containing cyanoacetamide moieties, the existence of aromatic amine substituents on the P atoms created central chiral phosphorus atoms, i.e. the two aromatic groups revealed two sets of peaks in the ¹H and ¹³C NMR spectra, while compounds with aliphatic moieties did not display this effect.     

Steric control in the stereospecific complexation of chiral α-olefins to platinum(II)

The complexes trans-dichloro[R(CH₃)C^*HCH=CH₂](pyridine)platinum-(II), R = C₂H₅, i-C₃H₇, t-C₄H₉, have been prepared and their ¹H NMR and CD spectra investigated. The two diastereomers formed in the complexation of the chiral α-olefin to Pt^II are present in different concentrations in solution, the diastereomer of opposite absolute configuration at the two chiral centres being the prevailing one. The extent of stereoselectivity, evaluated both by NMR and CD, varies from 32% to 75% by changing the bulkiness of the R group. The preferred conformation of the two diastereomers for each complex has been established by NMR, taking into account the deshielding effect on the protons bound to saturated carbon atoms as well as J(HH) and J(PtH) coupling constants.     

Calix[3]amides—bowl-shaped cyclic trimers toward building block for molecular recognition: self-complementary dimeric structure in the crystal

Bowl-shaped cyclic trimers of aromatic amides were simply synthesized in high yield by condensation reaction of meta-substituted 3-(alkylamino)benzoic acid using dichlorotriphenylphosphorane. The cyclic amides exist in syn conformation, which has a small chiral cavity, and a pair of each enantiomeric conformer formed a dimeric structure in the crystal.     

Molecular chirality and chiral capsule-type dimer formation of cyclic triamides via hydrogen-bonding interactions

Chiral properties of bowl-shaped cyclic triamides bearing functional groups with hydrogen-bonding ability were examined. Chiral induction of cyclic triamide 3a was observed by addition of chiral amine in solution, and chiral separation was achieved by simple crystallization to afford chiral capsule-type dimer structure of 4a.     

Stereochemistry of chiral pentacoordinate spirophosphoranes correlated with solid-state circular dichroism and 1H NMR spectroscopy

Two sets of diastereomers of pentacoordinate spirophosphoranes separately derived from l-valine (or d-valine) and l-leucine (or d-leucine) were synthesized, isolated, and structurally characterized both in the solid state (X-ray crystallography and solid-state CD spectroscopy) and in the solution (¹H NMR). The Λ and Δ absolute configurations of a pair of enantiomers 3a and 4a with distorted trigonal bipyramids (TBPs) geometry are directly determined by X-ray diffraction analysis, respectively. The chiral-at-phosphorus features of the related diastereomers were correlated with their solid-state CD and ¹H NMR spectra.     

Facile synthesis and optical resolution of inherently chiral fluorescent calix[4]crowns: enantioselective recognition towards chiral leucinol

A series of tri-O-alkylated inherently chiral fluorescent calix[4]crowns in the cone conformations and a series of tetra-O-alkylated inherently chiral fluorescent calix[4]crowns in the partial cone conformations have been synthesized. By condensing with chiral auxiliary (S)-BINOL, the resulting diastereomers could be separated via preparative TLC. We found that the size of the crown moiety effected the separation of the diastereomers. Further, removal of the BINOL unit by hydrolysis furnished pairs of enantiomers with optical purity. Moreover, we found that a tetra-O-alkylated inherently chiral fluorescent calix[4]crown-6 in the partial cone conformation 6c showed considerable enantioselective recognition capability towards chiral leucinol.     

Structural Dynamics and Stereoselectivity of Chiral Benzylideneamine N,C-Chelate Borane Photo–Thermal Isomerization

New chiral N,C-chelate organoboron compounds based on benzylideneamines (bza) with the general formula of B(bza-R)Mes₂ (R=H or Me; Mes=mesityl) are reported. A chiral substituent group R- or S-CH(CH₃)Ph (Ph=phenyl) was introduced to the imine center, which imposed a previously unobserved pseudo- or axial-chirality on the BMes₂, creating distinct diastereomers. NMR spectroscopic studies established that the diastereomers undergo slow exchange in solution at ambient temperature. The chiral N,C-chelate B(bza-R)Mes₂ molecules undergo photoisomerization in the same manner as their non-chiral analogues, generating chiral BN-cyclooctatriene (BN-COT) derivatives. Most significantly, by tracking the photoisomerization with circular dichroism (CD) and ¹H NMR spectra along with time-dependent density functional theory (TD-DFT) computational studies, the photoisomerization was established to proceed in a highly stereoselective manner, that is, one diastereomer converts exclusively to the corresponding diastereomer product in the photoreaction.     

An inherently chiral calix[4]crown carboxylic acid in the 1,2-alternate conformation

For better understanding of the structure/property relationship of inherently chiral calixarenes in the 1,2-alternate conformation, we designed and synthesized an inherently chiral calix[4]crown-4 carboxylic acid 1,2-alternate conformer. Resolution of the racemates was effected by condensation with (S)-BINOL as a chiral auxiliary and separation of the resultant diastereomers via preparative TLC plates, followed by hydrolysis of the isolated diastereomers to afford enantiopure antipodes of the title compound. Preliminary property study revealed that the title compound has the ability to enantioselectively discriminate 2-phenylglycinol by ¹H NMR spectroscopy.     

Untersuchung der diastereomerenumwandlung an η3-allylpalladiumphosphinkomplexen mittels 2D-1H-NMR-spektroskopie

The diastereomers of the complexes η³-allyl-cis- and -trans-2,3-diphenyl-1,3-oxaphosphorian—palladium chloride formed from chiral phosphines can be detected in the NMR spectra (1H, ³¹P) below 300 K). The cross-peaks of the ²D-¹H-NOE-NMR spectra display a transformation of diastereomers through conversion into the σ-allyl form together with rotation both around the CPd-axis and the CC-axis of the σ-allyl group.     

Coordination chemistry of tetradentate N-donor ligands containing two pyrazolyl-pyridine units separated by a 1,8-naphthyl spacer: dodecanuclear and tetranuclear coordination cages and cyclic helicates

The tetradentate ligand L(naph) contains two N-donor bidentate pyrazolyl-pyridine units connected to a 1,8-naphthyl core via methylene spacers; L45 and L56 are chiral ligands with a structure similar to that of L(naph) but bearing pinene groups fused to either C4 and C5 or C5 and C6 of the terminal pyridyl rings. The complexes [Cu(L(naph))](OTf) and [Ag(L(naph))](BF4) have unremarkable mononuclear structures, with Cu(I) being four-coordinate and Ag(I) being two-coordinate with two additional weak interactions (i.e., "2 + 2" coordinate). In contrast, [Cu4(L(naph))4][BF4]4 is a cyclic tetranuclear helicate with a tetrafluoroborate anion in the central cavity, formed by an anion-templating effect; electrospray mass spectrometry (ESMS) spectra show the presence of other cyclic oligomers in solution. The chiral ligands show comparable behavior, with [Cu(L45)](BF4) and [Ag(L45)](ClO4) having similar mononuclear crystal structures and with the ligands being tetradentate chelates. In contrast, [Ag4(L56)4](BF4)4 is a cyclic tetranuclear helicate in which both diastereomers of the complex are present in the crystal; the two diastereomers have similar gross geometries but are significantly different in detail. Despite their different crystal structures, [Ag(L45)](ClO4) and [Ag4(L56)4](BF4)4 behave similarly in solution according to ESMS studies, with a range of cyclic oligomers (up to Ag9L9) forming. With transition-metal dications Co(II), Cu(II), and Cd(II), L(naph) generates a series of unusual dodecanuclear coordination cages [M12(L(naph))18]X24 (X- = ClO4- or BF4-) in which the 12 metal ions occupy the vertices of a truncated tetrahedron and a bridging ligand spans each of the 18 edges. The central cavity of each cage can accommodate four counterions, and each cage molecule is chiral, with all 12 metal trischelates being homochiral; the crystals are racemic. Extensive aromatic stacking between ligands around the periphery of the cages appears to be a significant factor in their assembly. The chiral analogue L45 forms the simpler tetranuclear, tetrahedral coordination cage [Zn4(L45)6](ClO4)(8), with one anion in the central cavity; the steric bulk of the pinene chiral auxiliaries prevents the formation of a dodecanuclear cage, although trace amounts of [Zn12(L45)18](ClO4)24 can be detected in solution by ESMS. Formation of [Zn4(L45)6](ClO4)8 is diastereoselective, with the chirality of the pinene groups controlling the chirality of the tetranuclear cage.     

Enantiomer resolution of intrinsically chiral C21-alkylated N-confused porphyrin complexes

The resolution of stereoisomers of C21‐alkylated nickel(II) complexes of N‐confused porphyrin (NCP) was performed by means of chiral‐phase HPLC with an effectiveness of above 90 % molar ratio for each isomer. The reverse signs of the Cotton effects in the circular dichroism (CD) spectra of the separated fractions are indicative of the pair of enantiomers. The application of low‐temperature 2D NMR methods to the separated diastereomers of the system comprising a chiral 2‐(S)‐methylbutyl substituent, in connection with the CD spectra and relative HPLC migration rates, allowed the assignment of the absolute configuration of the chiral C21‐substituted complexes of NCP. The assignment was confirmed by time‐dependent DFT (TDDFT) calculations of CD spectra for the C21‐methylated nickel(II) complex. The system remains chiral after removal of the metal ion from the macrocyclic crevice, despite the fact that this demetalation is connected with a change of the C21 hybridization from pyramidal to trigonal. The retention of chirality was established by means of CD spectra and confirmed by TDDFT calculations for a C21‐methylated NCP free base. Stereoisomers were also separated for three covalently linked bis(NCP) systems with bridges involving one or two C21 carbon atoms. The occurrence of a pair of enantiomers was established for nonsymmetrical dimers comprising only one stereogenic center. In the case of the 21,21′‐(o‐xylene)‐linked dimer, three stereoisomers, that is, a pair of enantiomers and an optically inactive meso‐form, were separated and analyzed by CD and ¹H NMR spectroscopy. The stereoisomers of a diastereoselectively formed nonsymmetrical chloroplatinum(II)‐linked dimer, consisting of heterochiral C21‐alkylated NCP nickel(II) subunits, after separation displayed a strong optical activity, which can be ascribed to the rigid helical structure of the complex.     

Synthesis and helical properties of aromatic multilayered oligoureas

Several aromatic multilayered oligoureas with different chain lengths and different numbers of chiral N-substituents were synthesized, and their helical conformation and induced handedness were examined by means of CD spectroscopy. Introduction of one chiral N-substituent is enough to induce handedness, and all the oligoureas examined exist predominantly as helical structures with all-S axial chirality. The hexaureas 6 and 7 had similar CD intensity to the tetraureas 4 and 5, and had larger CD intensity than diurea 8. The results indicate that the effect of a chiral N-substituent at the central benzene ring in inducing well-ordered handedness at the terminal positions of hexaureas 6 and 7 is relatively weak, even though these compounds mainly take the form of aromatic multilayered foldamers.     

Resolution of inherently chiral calix[4]arenes with AABB and CDCD substitution patterns on the upper and lower rims,respectively

Proximal di-tert-butylcalix[4]arene (5,11-di-tert-butylcalix[4]arene-25,26,27,28-tetrol) 1b, obtained by direct partial removal of tert-butyl groups from p-tert-butylcalix[4]arene, gave high yields of inherently chiral derivatives upon ‘symmetry breaking’ by syn-distal di-O-alkylation or di-O-acylation in the presence of K₂CO₃. The chirality of these compounds was proven by the splitting of ¹H NMR signals in the presence of Pirkle's reagent and in some cases by HPLC enantiomeric resolution using chiral stationary phases and corroborated by mirror-image CD spectra.     

Normal Phase TLC Separation of Enantiomers Using Chiral Ion Interaction Agents

Abstract

A method for the thin layer chromatographic (TLC) separation of enantiomers and diastereomers involving the use of chiral ion interaction agents is described. Several aromatic amino alcohols were resolved by TLC on diol and/or high performance silica gel plates using a mobile phase containing (1R)-(-)- ammonium-10-camphorsulfonate or N-benzoxycarbonyl-glycyl-L-proline (ZGP). Many of these chiral aromatic amino alcohols are of pharmacological importance as α- and β-adrenergic blockers, adrenergic compounds, and anti-glaucoma agents. A comparison was made between various N-CBZ-amino acid derivatives as chiral counter ions/chiral mobile phase additives (CMAs). These separations could not be achieved on other normal phase TLC stationary phases including microcrystalline cellulose, alumina and ordinary silica gel plates.     

Enantioseparation of protonated primary arylalkylamines and amino acids containing an aromatic moiety on a pyridino-crown ether based new chiral stationary phase

This paper reports the preparation and testing of a new pyridino-18-crown-6 ether based chiral stationary phase (CSP). The chiral crown ether was covalently bound to silica gel. Circular dichroism (CD) spectroscopy was used for probing the complex formation of the chiral crown ether with the enantiomers of protonated primary arylalkylamines. The (S,S)-dimethylpyridino-18-crown-6 ether selector having a terminal double bond was first transformed to a triethoxysilyl derivative by regioselective hydrosilylation, and then heated with spherical HPLC quality silica gel to obtain the CSP. The discriminating power of the HPLC column filled with the above CSP was tested by using the hydrogenperchlorate salts of racemic α-(1-naphthyl)ethylamine (1-NEA), α-(2-naphthyl)ethylamine (2-NEA) and the hydrochloride salts of aromatic α-amino acids and α-amino acids containing different aromatic side-chain protecting groups.     

Stereochemical assignment of topsentolide C2 by stereodivergent synthesis of its four diastereomers

Four diastereomers of topsentolide C₂, a cytotoxic nine-membered lactone isolated from the marine sponge Topsentia sp., were synthesized stereodivergently from a common chiral seco acid by the combined use of the Yamaguchi and Mitsunobu lactonizations. Comparison of the NMR spectra of the four diastereomers with those of an authentic sample of topsentolide C₂ led to the stereochemical determination of topsentolide C₂ as 8R, 11S, and 12S.     

Atropisomerism of diastereomer diribonucleoside phosphotriester

Linear diribonucleoside phosphotriester is an important intermediate for synthesizing biologically important compounds,such as cyclic bis（3’-5’） diguanylic acid（c-di-GMP） and its analogues. Atropisomerism of diastereomers generated by the chiral center of the P atom,which results in the doubling of signals in ³¹P NMR.The data of ³¹P NMR at different temperature are presented,and thereafter the reason is discussed.     

2,3-Dihydroisoindolones by cyclisation and rearomatisation of lithiated benzamides

Lithiation of tertiary aromatic N-benzyl amides generates [α]-amido benzyllithiums which cyclise with dearomatisation to cyclic extended enolates. Rearomatisation by oxidation, or, in the case of methoxy-substituted enolates, elimination, yields 2,3-dihydroisoindoles. Enantiomerically enriched products may be formed either by using a chiral base to lithiate the starting material or by using a chiral starting material.     

A novel separation technique of diastereomeric esters of pyridylethanols by extraction: formal total synthesis of PNU-142721, HIV-1 reverse transcriptase inhibitor

The separation of diastereomeric esters derived from (±)-pyridylethanols and 3β-acetoxyetienic acid were achieved by an extraction technique using diethyl ether and aqueous hydrochloric acid. A formal total synthesis of PNU-142721 was effectively carried out to prepare the chiral, non-racemic synthon 1-furo[2,3-c]pyridin-5-yl-ethanol (1) by means of this technique. The structure optimized using MOPAC calculations on each diastereomer suggested the presence of intramolecular CH/π interaction in only the (S)-isomer of the diastereomers.     

Novel freebase and zinc bilinone dimers with optically active peripheral groups. Synthesis and application to chiral nematic induction in a nematic mesophase

In order to investigate effective dopants to induce chiral nematic liquid crystalline phases, novel freebase (FbBL) and zinc bilinone (ZnBL) derivatives bearing optically active aliphatic groups ((S)-3,7-dimethyloctyls) at the peripheral positions were prepared. From the CD spectra, it was confirmed that M-helicity in the bilinone frameworks was modestly enriched for ZnBLs, whereas helicity was hardly induced for FbBLs except for the o-xylylene-spaced dimer. When N-(4-methoxybenzylidene)-4-butylaniline (MBBA) was doped with the bilinone derivatives, the chiral nematic phase was effectively induced, and the helical twisting powers (β_Ms) ranged from ?95 to ?159 μm^?1. The control experiment using (S)-3,7-dimethyl-1-phenyloctane (β_M = +14 μm^?1) clearly showed that the induced chiral helical frameworks of FbBL and ZnBL predominantly contribute to chiral nematic induction of MBBA.