In flow activation of diol-silica with cyanogen bromide and triethylamine for preparing high-performance affinity chromatographic columns

A new coupling strategy using pre-packed diol-silica supports to obtain affinity columns for high-performance affinity chromatography (HPAC) is described. These columns were prepared by "in flow" activation in which solutions containing anhydrous solutions of CNBr and triethylamine are separately pumped to a mixer and then onto a pre-packed diol-silica column. Recycling the amino ligand to be coupled several times over the activated silica diol columns results in ligand immobilization. DNA (the Op 1 lac operator), 6-aminohexyl-Cibacron and a peptide (melittin) were all successfully "in flow" coupled to freshly activated columns. Methods for CNBr activation of pre-packed diol-silica column were developed for one, two or three pump HPLC systems. The supports were successfully used for the HPAC purification of a Lac repressor-beta-galactosidase fusion protein, alcohol dehydrogenase, and calmodulin. Columns prepared by in flow activation/coupling procedures were shown to be stable for at least 14 months. Also, in flow activated silica columns could be stored in anhydrous acetone for at least 3 months prior to coupling. Our experiments with these affinity ligand columns (DNA-silica, aminohexyl-Cibacron F3GA-silica, and melittin-silica), suggests that this is a very successful coupling protocol for producing a variety of HPAC columns.     

Immobilization of monoclonal antibodies for affinity chromatography using a chelating peptide.

A procedure was developed for oriented immobilization of monoclonal antibodies on a solid support. The technique involves the specific oligosaccharide-directed covalent modification of the monoclonal antibody (mAb) with the chelating peptide, Lys-Gly-(His)6, in conjunction with immobilized metal ion affinity chromatography. Chelating peptide-mAb conjugates with a molar ratio of 2.2 retained full antigen binding activity. On immobilization of the modified antibodies on a nickel affinity resin, the molar antigen binding ratio was 1.4. The high antigen binding capacity is indicative of oriented immobilization providing maximum access for the antigen. The described method can be used for the preparation of high-capacity immunosorbents for affinity chromatography and it is applicable for all immunoglobulin classes.     

Application of the FCP-activation procedure to the synthesis of a biospecific adsorbent for trypsin

The synthesis of a biospecific adsorbent for trypsin was chosen as a model to investigate the applicability of FCP activation in affinity chromatography.p-Aminobenzamidine was chosen as a ligand, directly suitable for immobilization. The nonspecific binding properties of the first series of synthesized agarose derivatives were obviated either by FCP activation of the ligand instead of the matrix, or by modifying the initial FCP-activation procedure. The adsorbents prepared in this way, however, demonstrated no selectivity between trypsin and chymotrypsin. The introduction ofe-aminocaproic acid as a spacer was ineffectual. These problems were solved by the application of glycylglycine as a spacer. The final affinity matrices had a degree of substitution of approximately 4 μ.mol of ligand per gram gel (100 μmol ligand per gram dry adsorbent). The specific activity of a current trypsin preparation was increased by 58% in a single cycle. The biospecificity of these adsorbents was demonstrated.     

Polymeric supports for affinity chromatography and high-performance affinity chromatography

Affinity chromatography is the most selective chromatographic method for the purification of biologically active materials. It is based on the biospecific interaction of the substrates with a ligand, which is chemically immobilized onto a suitable matrix (support). Different matrices provided by natural and synthetic polymers are used for the preparation of affinity supports. In this communication we describe and compare the properties of various supports based on polysaccharides, polyacrylamides and inorganic materials. In particular, we discuss the utility of different silica derivatives (especially primary hydroxyl silica) for the immobilization of ligands and high-performance affinity chromatography.     

Column packings with immobilized methyl polysiloxane phases for gas chromatography

Summary The free radical cross-linking procedure of stationary phase immobilization introduced by Grob et al. for capillary columns has been adapted for the preparation of column packings on diatomaceous supports. Immobilization of SE-30 and OV-1 on typical gas chromatography supports: Polsorb B-AW, Chromosorb W-AW, Chromosorb G-AW and Gas Chrom Q was investigated. Before immobilization, the supports (excluding Gas Chrom Q) were purified by extraction with 6 M HCl in a Soxhlet extractor and silanized with hexamethyldisilazane vapour at 300°C.The influence of the type and concentration of peroxide on the efficiency of immobilization of the silicone was studied. In order to obtain over 95% immobilization a minimum of 2% w/w of the peroxide in the stationary liquid is required.Properties of packings with immobilized phase were compared with those of related conventional packings. Adsorption activity, column efficiency and thermal stability were used for this comparison.     

Synthesis of Beaded Polyvinyl Alcohol by Suspension Methanolysis of Polyvinyl Acetate: Derivatization and Some Applications

A new procedure for the synthesis of porous and nonporous polyvinyl alcohol beads by controlled methanolysis of different concentrations of polyvinyl acetate suspension is described. By crosslinking with epichlorohydrin, insoluble crosslinked polyvinyl alcohol gels were obtained. These gels exhibit some peculiar swelling properties related to the reticulation degree, probably due to the interchain hydrogen associations. Crosslinked polyvinyl alcohol beads can be used as supports for liquid chromatography and for enzyme immobilization. Some new stationary phases for affinity chromatography and for ion-exchange chromatography were obtained. No substantial modifications in the catalytic properties of enzyme immobilized on crosslinked polyvinyl alcohol gels were established.     

Monolith peptide affinity chromatography for quantification of immunoglobulin M

We have developed a method for quantification of a specific monoclonal IgM directed toward embryonic stem cells based on a peptide affinity monolith. A peptide affinity ligand with the sequence C-C-H-Q-R-L-S-Q-R-K was obtained by epitope mapping using peptide SPOT synthesis. The peptide ligand was covalently immobilized by coupling the N-terminal cysteine to a monolithic disk that was previously modified with iodated spacer molecules. The monolithic disc was used for quantification of purified IgM and for IgM present in mammalian cell culture supernatant. We observed 17% unspecific binding of IgM to the monolithic disk and additionally a product loss in the flow through of 20%. Nevertheless, calibration curves had high correlation coefficients and inter/intra-assay variability experiments proved sufficient precision of the method. A limit of quantification of 51.69 μg/mL for purified IgM and 48.40 μg/mL for IgM in cell culture supernatant could be calculated. The binding capacity was consistent within the period of the study which included more than 200 cycles. The analysis time of less than 2 min is an advantage over existing chromatographic methods that rely on pore diffusion.     

Integrated SPPS on continuous-flow radial microfluidic chip

A novel integrated continuous-flow microfluidic system was designed and fabricated for solid phase peptide synthesis (SPPS) using conventional reactants. The microfluidic system was composed of a glass-based radial reaction chip, a diffluent chip, amino acid feeding reservoirs and continuous-flow reagent pathways. A tri-row cofferdam-fence structure was designed for solid phase supports trapping. Highly cross-linked, porous and high-loading 4-(hydroxymethyl)phenoxymethyl polystyrene (HMP) beads were prepared for microfluidic SPPS. The transfer losses, hazardous handling and time-consuming processes in traditional peptide cleavage steps were avoided by being replaced with the on-chip cleavage treatment. Six peptides from an antibody affinity peptide library against β-endorphin with different lengths and sequences were obtained simultaneously on the constructed continuous-flow microfluidic system within a short time. This microfluidic system is automatic, integrated, effective, low-cost, recyclable and environment-friendly for not only SPPS but also other solid phase chemical syntheses.     

Separation and characterization of multicomponent peptide mixtures by liquid chromatography-electrospray ionization mass spectrometry. Application to crude products of the synthesis of leuprolide

Leuprolide is a synthetic structural analogue of luteinizing hormone-releasing hormone used for the treatment of a large number of diseases related with the regulation of sexual hormones. Solid-phase peptide synthesis is used to obtain leuprolide peptidic hormone, but this synthetic procedure results in complex mixtures that need separation and characterization. Here, liquid chromatography coupled with mass spectrometry using electrospray ionization, (LC–ES-MS), was used for the separation and characterization of multicomponent peptide mixtures of crudes of synthesis of leuprolide. To optimize the LC separation process, the method of linear solvation energy relationships was applied and the powerful coupling LC–ES-MS permitted rapid and reliable characterization of the reaction product.     

Immobilised peptide displaying phages as affinity ligands. Purification of lactoferrin from defatted milk

An affinity purification procedure for the direct purification of lactoferrin from defatted (skimmed) milk has been developed. The procedure is based on using selected phage clones expressing a peptide with high binding affinity for lactoferrin which were covalently coupled to macroporous poly(dimethylacrylamide) monolithic column. Large pore size (10-100 microm) of macroporous poly(dimethylacrylamide) makes it possible to couple long (1 microm) phage particles as ligands without any risk of blocking the monolithic column. Bound lactoferrin was eluted using 1M NaCl with a purity of >95%. The technique presents a good alternative to conventional immunoaffinity chromatography for purification of a protein of interest from complex samples due to (i) the robustness of the system in terms of recovery and ligand leakage and (ii) economical aspect in terms of low ligand cost.     

Influence of molecular interactions on ultrafiltration of a bovine hemoglobin hydrolysate with an organic membrane

Inter-molecular interactions involved in the hydrolysate were studied in order to explain heme and peptide high retentions observed during the ultrafiltration of a bovine hemoglobin peptidic hydrolysate with a 10 kDa modified polyethersulfone membrane.Physico-chemical properties of the peptidic fractions of the retentate and of the permeate were characterized by UV/vis spectroscopy, SDS-PAGE electrophoresis, size-exclusion chromatography, reversed phase HPLC, hydrophobic interaction chromatography on hemin agarose, precipitation with sodium chloride and amino acid compositions. Two populations of peptides were revealed in the hydrolysate: one forming high-molecular weight hydrophobic associations retained by the membrane, and another more hydrophilic, giving no associations and freely passing through the membrane. Contrary to the peptides of the permeate, peptides retained by the membrane had a high affinity and a large binding capacity for the heme. Heme as polymers is mainly linked by hydrophobic interactions with peptide associations to form large heme–peptide aggregates. These results suggest that high rejections of heme and peptide, often reported in the literature, during ultrafiltration of hemoglobin hydrolysates, could be largely explained by these associations.     

Synthesis of Resins with Chiral Salen Complexes

The enormous growth in the use of polymer resin supports in solid phase combinatorial synthesis, and related methodologies, has re-stimulated interest in the area of polymer-supported transition metal complex catalyst .The recently developed chiral salen-based for the enantioselective ring opening of meso epoxides and kinetic resolution of terminal epoxides are appealing candidates for immobilization on solid support. The catalysts are reading prepare from inexpensive components, and are amenable to modification for attachment to a solid support.     

Solid-phase synthesis of peptide and glycopeptide thioesters through side-chain-anchoring strategies

An efficient new strategy for the synthesis of peptide and glycopeptide thioesters is described. The method relies on the side-chain immobilization of a variety of Fmoc-amino acids, protected at their C-termini, on solid supports. Once anchored, peptides were constructed using solid-phase peptide synthesis according to the Fmoc protocol. After unmasking the C-terminal carboxylate, either thiols or amino acid thioesters were coupled to afford, after cleavage, peptide and glycopeptide thioesters in high yields. Using this method a significant proportion of the proteinogenic amino acids could be incorporated as C-terminal amino acid residues, therefore providing access to a large number of potential targets that can serve as acyl donors in subsequent ligation reactions. The utility of this methodology was exemplified in the synthesis of a 28 amino acid glycopeptide thioester, which was further elaborated to an N-terminal fragment of the glycoprotein erythropoietin (EPO) by native chemical ligation.     

Peptide affinity chromatography media that bind N fusion proteins under chaotropic conditions

To design a generic purification platform and to combine the advantages of fusion protein technology and matrix-assisted refolding, a peptide affinity medium was developed that binds inclusion body-derived N^pro fusion proteins under chaotropic conditions. Proteins were expressed in Escherichia coli using an expression system comprising the autoprotease N^pro from Pestivirus, or its engineered mutant called EDDIE, with C-terminally linked target proteins. Upon refolding, the autoprotease became active and cleaved off its fusion partner, forming an authentic N-terminus. Peptide ligands binding to the autoprotease at 4 M urea were screened from a combinatorial peptide library. A group of positive peptides were identified and further refined by mutational analysis. The best binders represent a common motif comprising positively charged and aromatic amino acids, which can be distributed in a random disposition. Mutational analysis showed that exchange of a single amino acid within the peptide ligand caused a total loss of binding activity. Functional affinity media comprising hexa- or octapeptides were synthesized using a 15-atom spacer with terminal sulfhydryl function and site-directed immobilization of peptides derivatized with iodoacetic anhydride. The peptide size was further reduced to dipeptides comprising only one positively charged and one aromatic amino acid. Based on this, affinity media were prepared by immobilization of a poly amino acid comprising lysine or arginine, and tryptophan, phenylalanine, or tyrosine, respectively, in certain ratios. Binding capacities were in the range of 7–15 mg protein mL⁻¹ of medium, as could be shown for several EDDIE fusion proteins. An efficient protocol for autoproteolytic cleavage using an on-column refolding method was implemented.     

A chemoenzymatic approach enables the site‐specific conjugation of recombinant proteins

Many biotechniques including protein microarray, drug screening, biosensors rely on the immobilization of recombinant proteins on the solid supports. It is well known that random orientation of the immobilized proteins could impair their biologic functions. Thus, it is very important to develop new site‐specific immobilization approach. In this study, we presented a chemoenzymatic approach for site‐specific conjugation of recombinant proteins onto solid support. In this strategy, the affinity tag on recombinant protein was enzymatically cleaved to expose the N‐terminal serine, which was oxidized to carry an aldehyde group and was then covalently coupled to hydrazide resin through hydrazone ligation. As this approach takes advantage of the most frequently used TEV protease, it requires no further sequence design on recombinant protein. This method was validated by site specific coupling of a synthetic peptide and a recombinant protein onto solid supports. It was found that the site specific immobilized SH2 domain is functional and could be used to enrich tyrosine phosphorylated peptides.     

Preparation of macroporous monoliths based on epoxy-bearing hydrophilic terpolymers and applied for affinity separations

This work reports the synthesis and characterization of poly(N-acryloyl-tris(hydroxymethyl)aminomethane-co-glycidyl methacrylate-co-N,N′-methylenebisacrylamide) [poly(NAT-GMA-BIS)] discs using different porogenic solvents. The macroporous polymer obtained with PEG 6000 as co-porogen showed the best porous properties of the series. End-point immobilization of heparin (Hep, as ligand) was then carried out on the products through reductive amination. Thus, the products were reacted with ethylenediamine (EDA) and hexamethylenediamine (HMDA) in order to introduce amine groups and to analyze the length of the spacer on the immobilization of heparin. Then, the highest value of amine groups [1.280 and 0.919 mmol amine/g dry support for poly(NAT-GMA-BIS)-EDA and poly(NAT-GMA-BIS)-HMDA, respectively] was obtained at 40 °C after 48 h of reaction. Finally, the amount of ligand coupled to discs was not influenced by the two length spacers assayed. The amount of Hep coupled on discs [591.50 and 489.90 μg Hep/g dry polymer for poly(NAT-GMA-BIS)-EDA-Hep and poly(NAT-GMA-BIS)-HMDA-Hep, respectively] was similar to that obtained using macroporous polymer beads reported by other authors. The supports yielded were used to assay the retention of antithrombin III (AT-III). The retention was greater for the EDA-containing product with a larger amount of heparin. These novel heparin-containing macroporous poly(NAT-GMA-BIS) discs could be used as potential affinity chromatography supports.     

Towards sequence selective DNA binding: design, synthesis and DNA binding studies of novel bis-porphyrin peptidic nanostructures

A new series of peptidic nanostructures bearing two intercalating moieties was designed and synthesized to achieve selective recognition of DNA sequences. A cationic porphyrin was attached to a glutamic acid side chain and the latter introduced into a peptidic sequence by standard solid-phase peptide synthesis methodology. Conformation of the hydrosoluble peptidic structures bearing two cationic porphyrins was studied by circular dichroism. Using UV-visible spectroscopy and induced circular dichroism, we demonstrate that the compounds are fully intercalated upon binding to double-stranded DNA and that the compounds exhibit a tremendous preference for GC over AT sequences for intercalation.     

General synthesis of unsymmetrical norbornane scaffolds as inducers for hydrogen bond interactions in peptides

Starting from readily accessible endo-cis-(2S,3R)-norbornene dicarboxylic acid benzyl monoester, a general and efficient synthetic approach toward unsymmetrical two-stranded peptidic structures was developed. In these structures the peptide strands are oriented in a parallel geometry. Their synthesis is easily applicable to a variety of amino acids and peptides. Specifically, a norbornane template as molecular scaffold induces hydrogen bonding between the adjacent peptide strands. The specific hydrogen bonding patterns between these strands were revealed by detailed NMR analysis including TOCSY/NOE experiments.     

Tricarbonylchromium tryptophan derivatives and their use in peptide synthesis

Incorporation of a Cr(CO)₃ ligand into the indole ring of N-α-t-butoxycarbonyl-tryptophan methyl ester was achieved in 47% yield. The corresponding para-nitrophenyl ester was used in the solid phase synthesis of a peptidic hormone (LHRH) analogue with the aim of decreasing tryptophan alkylation. No improvement was observed.