New methodology for the characterization of (±)-anti-BPDE-DNA adducts and tetrol I-1 with solid-matrix phosphorescence

Novel solid-matrix phosphorescence (SMP) methods were developed for the detection and characterization of (±)-anti-benzo[a]pyrene-trans-7,8-dihydrodiol-9,10-epoxide ((±)-anti-BPDE)-DNA adducts and a hydrolysis product of the (±)-anti-BPDE-DNA adducts, tetrol I-1, by using the heavy-atom salts, thallium nitrate and sodium iodide, to enhance the solid-matrix phosphorescence. Thallium nitrate was much more effective for enhancing the SMP of the (±)-anti-BPDE-DNA adducts and tetrol I-1. Thus, the results from TlNO₃ were emphasized. The amount of TlNO₃ adsorbed on the solid matrix was varied over a wide range, and SMP intensities, lifetimes, and spectra were acquired. Fundamental equations and calculated photophysical parameters were used to interpret the data and characterize the samples. The data indicated that there were two major populations of the (±)-anti-BPDE-DNA adducts and tetrol I-1 adsorbed on the solid matrix. Because DNA was adsorbed so strongly to the solid matrix, the (±)-anti-BPDE-DNA adducts interacted in a uniform manner with increasing amounts of TlNO₃. However, tetrol I-1 responded in a more random fashion with the increase in the amount of TlNO₃. The methods developed can be used to compare the SMP of small molecular-weight metabolites and DNA samples modified at different levels of (±)-anti-BPDE. Also, the methodology can be employed for DNA samples that are adducted with any material that would give measurable SMP.     

Highly sensitive electrochemical immunoassay for human IgG using double-encoded magnetic redox-active nanoparticles

A new sandwich-type electrochemical immunoassay was developed for the detection of human IgG using doubly-encoded and magnetic redox-active nanoparticles as recognition elements on the surface of a glassy carbon electrode modified with anti-IgG on nanogold particles. The recognition elements were synthesized by coating magnetic Fe₃O₄ nanoparticles with Prussian blue nanoparticles and then covered with peroxidase-labeled anti-IgG antibodies (POx-anti-IgG) on Prussian blue nanoparticles. The immunoelectrode displays very good electrochemical properties towards detection of IgG via using double-encoded magnetic redox-active nanoparticles as trace and hydrogen peroxide as enzyme substrate. Its limit of detection (10 pmol·L^?1) is 10-fold better than that of using plain POx-anti-IgG secondary antibodies. The method was applied to the detection of IgG in serum samples, and an excellent correspondence with the reference values was found.     

Study of the origin of enantioselectivity in cyclopropanation reactions using the chiral iron carbene complex [(η5-C5H5)(CO)2FeCH[(η6-o-MeOC6H4)Cr(CO)3]]+

During our low temperature NMR studies we observed two rotational isomers of the carbene complex [(η⁵-C₅H₅)(CO)₂FeCH[(η⁶-o-MeOC₆H₄)Cr(CO)₃]]+ (3) with the O–Me group either anti or anti to the Fp moiety. While the Cr(CO)₃ group very effectively shields one face of the carbene complex from attack by the olefin, the presence of anti and anti isomers allows for the formation of both R and S configuration on C-1 of the cyclopropane through a backside or a frontside ring closure mechanism. The reaction of olefin with anti R-3 can result in R-configuration of the cyclopropane carbon C-1 through a frontside closure mechanism, or in S-configuration if backside closure takes place. In a similar manner, anti R-3 may produce S-configuration through frontside closure or R-configuration through backside closure. We previously have shown by crystallography that reaction the R-isomer of 3 with 2-methyl-propene induces predominantly a R-configuration at C-1 of the resulting cyclopropane (RR-(−)-2,2 dimethyl-1-o-methoxyphenyl(tricarbonyl chromium)cyclopropane, whereas the S-carbene results in the corresponding SS isomer. These findings are consistent with cyclopropane formation from the syn isomer through a frontside closure mechanism or from anti isomer through a backside closure mechanism. In the case of [(η⁵-C₅H₅)(CO)₂FeCH[(η⁶-o-MeC₆H₄)Cr(CO)₃]]+ (4), only anti isomer is observed and optical rotation data indicate that the methylcarbene exhibits the same asymmetric induction (i.e., R-carbene yields R-cyclopropane C-1 and S-carbene yields S-cyclopropane C-1) as the methoxy analogue, and the assumption of the anti isomer being the reactive one then implies that the reaction proceeds through a backside closure mechanism rather a frontside mechanism. It is very likely that this preference is also valid for the methoxy substituted complex 4. Our results on 4 indicate that the enantioselectivity of the cyclopropanation reaction is not determined by the relative abundance of the isomers. As the syn isomer is the more abundant one, the anti isomer has to be the more reactive one compared to the syn isomer. Interchange of syn and anti isomers occurs fast compared to the rate of reaction of the carbene with olefin. The fast rate of interchange of syn and anti isomers relative to the rate of reaction with olefin precludes the direct observation of any differential reactivity form a change in the syn to anti ratio in the NMR spectrum. However, the in general lower ee values observed for 3 compared with 4 are consistent with the fact that the reactive isomer is less abundant in this case. Our data thus show that enantioselectivity of cyclopropanation with “chiral at carbene” complexes is controlled by the higher reactivity of the anti isomer and occurs through a backside ring closure mechanism.     

Highly anti–anti selective synthesis of bis-β-amino ketones via three-component direct Mannich-type reaction of terephthalaldehyde catalyzed by ZrOCl2·8H2O

At room temperature, zirconium oxychloride (ZrOCl₂·8H₂O) efficiently catalyzes the direct Mannich-type reaction of a variety of in situ generated bis-imines using terephthalaldehyde and anilines with ketones in a three-component reaction at room temperature. The reaction proceeds rapidly and affords the corresponding bis-β-amino ketones in good-to-high yields with good-to-excellent anti–anti selectivity.     

Formation and reaction of 2-metalated N-Boc-4,4-dimethyl-1,3-oxazolidines in the presence of (−)-sparteine: new chiral formyl anion equivalents

Lithiation of N-Boc-4,4-dimethyl-1,3-oxazolidine with s-BuLi and the following reaction with benzaldehyde was carried out in the presence of (−)-sparteine. The reaction was not diastereoselective (syn:anti=46:54), but each isomer of the adducts was obtained enantioselectively (syn: 90% ee, anti: 88% ee). Addition of MgBr₂ to the reaction mixture increased the diastereoselectivity to syn:anti=90:10.     

Stereoselective synthesis of anti-2-oxazolidinones by Ph3P-CCl4-Et3N mediated SN2 cyclization of N-Boc-β-amino alcohols

Ethyl anti-4-substituted phenyl-2-oxo-1,3-oxazolidine-5-carboxylates were synthesized stereoselectively in excellent yields using the Ph₃P-CCl₄-Et₃N system by S_N2 cyclization of N-Boc-β-amino alcohols. syn to anti conversion of ethyl 4-substituted phenyl-2-oxo-1,3-oxazolidine-5-carboxylates using DBU as base is also described.     

Solvent- and temperature-controlled inversion of π-facial selectivity in the 1,2-cycloaddition of singlet oxygen to hydroxyphenyl-substituted cyclohexadihydrofurans

Singlet-oxygenation of 3-hydroxyphenyl-substituted dihydrofurans fused with a cyclohexane 1a?c exclusively gave the corresponding syn/anti-stereoisomeric mixtures of dioxetanes 2a?c. The syn/anti-π-facial selectivity in the 1,2-cycloaddition of singlet oxygen (¹O₂) was found to be remarkably sensitive to the solvent as well as the reaction temperature. In fact, the solvent effect was so conspicuous that inversion of the syn/anti-π-facial selectivity was observed in different solvents, such as chloroform and toluene. An LSER (linear solvation energy relationships) analysis suggested that the Lewis-acidity/basicity and HBD (hydrogen-bond donor)/HBA (hydrogen-bond acceptor) ability as well as dipolarity/polarizability of the solvent played an important role in this change in syn/anti-π-facial selectivity. An investigation of the temperature-dependency of the singlet-oxygenation suggested that the syn/anti-π-facial-selective 1,2-cycloaddition of ¹O₂ to 1 was a conformationally-(entropy-) controlled process.     

Anionic clays as hosts for anchored synthesis: Interlayer bromination of maleate and fumarate ions in nickel–zinc layered hydroxy double salt

Anionic clay-like nickel zinc hydroxyacetate, Ni₃Zn₂(OH)₈(OAc)₂·2H₂O was ion exchanged with maleate and fumarate ions. While the maleate enters as monoanion, fumarate enters as dianion. Also these anions take up different orientations in the interlayer region. The intercalated organic species could be reacted with bromine water in such a way that the brominated product remains intercalated making the reaction a true intracrystalline reaction. The stereochemistry of the reaction of the intercalated fumarate was identical to that of the free fumarate ion – both yielding only the anti addition product. While free maleate ion yielded only the anti addition product, the intercalated maleate ion yielded a small percentage of the syn addition product along with the anti addition product. The organic products could be quantitatively recovered by anion exchange with oxalate ions.     

Stereoselective anti-SN2′ Mitsunobu reaction of α-hydroxy-α-alkenylsilanes

A novel silyl group-directed anti-S_N2′ reaction of allylic alcohols under Mitsunobu reaction conditions is described. The Mitsunobu reaction of α-hydroxy-α-alkenylsilanes with a TBS or TIPS group gave the anti-S_N2′ product, in which regio- and stereochemical outcomes of the reaction depended on the steric bulkiness of the silyl group.     

Structure,electrochemistry, spectroscopy,and magnetic resonance,including high-field EPR,of {(μ-abpy)[Re(CO)3X]2}o/•−, where abpy = 2,2′-azobispyridine and X = F,Cl, Br,I

Attempts to prepare and study the title complexes yielded the structurally characterized neutral compounds anti-{(μ-abpy)[Re(CO)₃X]₂}, X = Br (I4₁/a), I (C2/c), and two crystalline forms of anti-{(μ-abpy)[Re(CO)₃Cl]₂}. One of these forms (P2₁/c) has been reported before, the other (I4₁/a), obtained through crystallization in the presence of Zn, is isostructural to the form found for anti-{(μ-abpy)[Re(CO)₃Br]₂}. Syntheses of {(μ-abpy)[Re(CO)₃Cl]₂} at high or low temperatures yielded different compositions, the high temperature procedure led to partial formation of syn/anti mixtures and one-electron reduced species. The same was observed to a greater extent in the preparation of labile syn/anti-{(μ-abpy)[Re(CO)₃F]₂}^o/??. The identity of isolated species was investigated using ¹H NMR spectroscopy, variable frequency EPR spectroscopy, cyclic voltammetry, UV/Vis- and IR-spectroelectrochemistry. The effects of halide variation on structure, reduction potentials, isomerism and electronic situation are being discussed.     

Quantitative study of stereospecific binding of monoclonal antibody to anti-benzo(a)pyrene diol epoxide-N-dG adducts by capillary electrophoresis immunoassay

The stereospecific binding of monoclonal antibody (mAb) 8E11 to anti-benzo(a)pyrene diol epoxide (BPDE)-dG adducts in single nucleoside, long oligonucleotide, and genomic DNA were quantitatively evaluated using noncompetitive and competitive capillary electrophoresis (CE) immunoassays. Two single-stranded TMR-BPDE-90mers containing a single anti-BPDE-dG adduct with defined stereochemistry and a fluorescent label at 5′-end were used as fluorescent probes for competitive CE immunoassay. To quantitatively evaluate the binding affinity through competitive CE immunoassays, a series of equations were derived according to the binding stoichiometry. The binding of mAb 8E11 to trans-(+)-anti-BPDE-dG displays strongest affinity (K_b: 3.57 × 10⁸ M⁻¹) among all four investigated anti-BPDE-dG mononucleoside adducts, and the cis-(−)-anti-BPDE-dG displays lowest affinity (K_b: 1.14 ×10⁷ M⁻¹). The binding of monoclonal antibody (mAb) 8E11 to BPDE-dG adducts in long DNA (90mer) preferentially forms the complex with a stoichiometry of 1:1, and that mAb 8E11 displays a slightly higher affinity with trans-(+)-anti-BPDE-90mers (K_b: 6.36 ± 0.54 × 10⁸ M⁻¹) than trans-(−)-anti-BPDE-90mers (K_b: 4.52 ± 0.52 × 10⁸ M⁻¹). The mAb 8E11 also displays high affinity with BPDE-dG adducts in genomic DNA (K_b: 3.74 × 10⁸ M⁻¹), indicating its promising applications for sensitive immuno-detection of BPDE-DNA adducts in genomic DNA.     

Photocleavage of dimers of coumarin and 6-alkylcoumarins

The cleavage of four coumarin dimers, the syn-head-to-tail (ht) dimer of parent coumarin (syn-ht-CC1), the anti- and syn-hh dimers of 6-methylcoumarin (anti-hh-CC2 and syn-hh-CC2, respectively) and the anti-hh dimer of 6-dodecylcoumarin (anti-hh-CC3), was studied by UV–vis and IR spectroscopy and HPLC upon direct 254 nm irradiation as well as sensitized excitation. The quantum yield of dimer splitting is Φ_sp = 0.1–0.3 in various solvents and the effects of structure and solvent polarity are small. In certain solvents some of the dimers produced CO₂ along with the monomers in the splitting reaction. Electron transfer from dimers to the triplet state of sensitizers, such as benzophenone or 9,10-anthraquinone, was observed in acetonitrile.     

Synthetic utility of bowl-shaped tris(2,6-diphenyl-benzyl)silyl glyoxylate as a stable glyoxylate: application to highly diastereoselective aldol reactions

A stable glyoxylate can be successfully applied to both syn- and anti-selective aldol reactions by using two different kinds of ordinary Lewis acids. Thus, treatment of bowl-shaped tris(2,6-diphenylbenzyl)silyl glyoxylate 1 with enol silyl ether under the influence of BF₃·OEt₂ gave syn-aldol product, while the use of TiCl₄ afforded anti-aldol product with >97% selectivity.     

Conformational isomerism of 1,2-bis(imidazol-1′-yl)ethane in five-coordination polymers: Influence of metal ions and m-isophthalate ligands bearing different substituents

Four novel coordination polymers, {[Zn(gauche-bime)(bdc)] · 0.5H₂O}_n (1), {[Zn(anti-bime)(HO-bdc)] · 2.5H₂O}_n (2), [Cu(gauche-bime)_0.5(anti-bime)_0.5(O₂N-bdc)]_n (4) and [Ni₂(gauche-bime)(anti-bime)(O₂N-bdc)₂(H₂O)₂]_n (5) were successfully prepared by the solvothermal reactions of 1,2-bis(imidazol-1′-yl)ethane (bime), m-isophthalic acid (H₂bdc) or its two derivatives (HO-H₂bdc = 5-hydroxyisophthalic acid, O₂N-H₂bdc = 5-nitroisophthalic acid) with different metal ions. Interestingly, bime in the four complexes exhibit different conformations owing to the synergetic influence of coexistent neutral (–H), electron-donating (–OH) or electron-withdrawing (–NO₂) groups of the dicarboxylate ligands and different metal ions. In 1 and 2, only one conformation of bime (gauche in 1 and anti in 2) is displayed, while the mixed conformations of bime (gauche:anti = 1:1) are observed in 4 and 5. At the same time, one previously reported compound {[Zn(anti-bime)(O₂N-bdc)] · H₂O}_n (3) as a comparable substance in the research system was also mentioned, in which the anti-conformation of bime was observed.     

Substituted propanes: V. The vibrational spectra,dipole moments and conformations of 1,2-dichloro-, 1-chloro-2-bromo- and 1,2-dibromopropane

The infrared and Raman spectra of 1,2-dichloro-, 1-chloro-2-bromo- and 1,2-dibromopropane were recorded as liquids, in polar and non-polar solvents and in the crystalline state at low temperatures. The infrared spectrum of a high pressure crystal of 1,2-dibromopropane was recorded at ambient temperature. Dipole measurements were carried out in CCl₄ and C₆H₆solutions.Each of the 1,2-dihalopropanes existed as a mixture of three conformers in the liquid state, the one with the halogens in the anti position was in large abundance. Spectral and dipole measurements revealed a comparatively larger concentration of the two polar gauche conformers in polar solvents. All the compounds crystallized in the anti form. The C-halogen stretching vibrations have been interpreted in detail. Vibrational analyses of the anti conformers have been carried out and a tentative assignment of the majority of the gauche bands has been proposed.     

Enantioselective aldol reactions with aqueous 2,2-dimethoxyacetaldehyde organocatalyzed by binam-prolinamides under solvent-free conditions

Aqueous 2,2-dimethoxyacetaldehyde (60% wt solution) is used as an acceptor in aldol reactions, with cyclic and acyclic ketones and aldehydes as donors, organocatalyzed by 10 mol % of N-tosyl-(S_a)-binam-l-prolinamide [(S_a)-binam-sulfo-l-Pro] at rt under solvent-free conditions. The corresponding monoprotected 2-hydroxy-1,4-dicarbonyl compounds are obtained in good yields and with high levels of diastereo- and enantioselectivity mainly as anti-aldols. In the case of 4-substituted cyclohexanones a desymmetrization process takes place to mainly afford the anti,anti-aldols. 2,2-Dimethyl-1,3-dioxan-5-one allows the synthesis of a useful intermediate for the preparation of carbohydrates in higher yield, de and ee than with l-Pro as the organocatalyst.     

Remote substituent effect favoring the formation of syn-adducts in the chelation controlled radical reactions of γ-benzyloxy-α-methylenecarboxylic acid esters

The chelation controlled radical reactions of ethyl γ-benzyloxy-α-methylenecarboxylates bearing a bulky γ-substituent, such as CHMe₂, CHPh₂, c-C₆H₁₁ and CH(Ph)OTBDMS, with alkyl iodides gave the syn-adducts with high diastereoselectivities. However, the diastereoselectivity for the substrates bearing a γ-substituent CH(i-Pr)OTBDMS depended critically on the configuration of the substituent; the substrate bearing the OTBDMS group anti to the γ-benzyloxy group showed poor diastereoselectivity, but its diastereomer gave syn-adduct exclusively. The high syn-selectivitiy is referred to the H-atom transfer to the outside face of radical center in the sharply folded seven-membered chelate intermediate bearing the ethoxy group with Z-geometry. The corner flapping of the radical center atom of the global minimum energy conformer generates a local minimum conformer and the H-atom transfer to the outside face of the radical center of the newly formed structure gives the anti-adduct. The poor diastereoselectivity is due to the very small energy difference between the two conformers and consequently both the syn- and anti-adducts are yielded in nearly equal amounts.     

Conformational studies of some 2-phenylpropyl derivatives by NMR spectroscopy and use of lanthanide shift reagents

The conformational distribution of CH₃CH(Ph)CH₂X (X = OH, OCH₃, NH₂ Cl) has been studied by NMR and IR spectroscopy. The results are interpreted in favour of the conformers with methoxy- or chloro-groups anti to the phenyl group, but the amino group anti to the methyl group. For the alcohol both forms are about equally populated. It is suggested that intra-molecular hydrogen bonding might be affecting the conformational equilibria when X = OH, NH₂.     

anti-Markovnikov addition of tellurium tetrachloride to trimethyl ethynyl silane

An investigation of the TeCl₄ interaction with trimethyl ethynyl silane 1 in CHCl₃ has shown that anti-Markovnikov adduct [Z-1-(trimethylsilyl)-2-chlorovinyl]tellurium trichloride is formed as the only product. In time, it is hydrolyzed to give [Z-1-(trimethylsilyl)-2-chlorovinyl]tellurium (hydroxy) dichloride which, in turn, is dehydrated to afford bis[(2-chloro-1-trimethyl-silylvinyl)dichlorotellurium]oxide. These data revealed that the reaction studied was the first example of anti-Markovnikov syn-addition of TeCl₄ to terminal acetylenes. A computed simulation of the TeCl₄ interaction with ethynyl silane 1 in a gas state using PES method did not reveal dominating orientation of the addition but showed the conditions at which anti-Markovnikov addition can occur and which were probably met in carrying out the reaction in CHCl₃.