High-resolution 13C NMR study of free and metal-complexed ionophores in the solid state: Conformation and dynamics of the macrocyclic ring and the effect of intermolecular short contact of methyl groups on spin–lattice relaxation times and displacements of chemical shifts

High-resolution ¹³C NMR spectra of 15 samples of uncomplexed and metal-complexed tetranactin and nonactin were recorded in the solid state, revealing characteristic displacements of peaks due to complex formation and the effect of crystalline packing on the ¹³C chemical shifts and spin–lattice relaxation times of the methyl groups. The C-1 ¹³C chemical shifts of uncomplexed and complexed tetranaction and nonactin are well related to the variation of nearby torsion angles characteristic of the macrocyclic conformation, as determined by x-ray diffraction. The existence of short intermolecular contact of methyl groups (<3.8 Å) at the surface of the molecules results in either prolonged ¹³C spin–lattice relaxation times in the laboratory frame (T₁^C) or substantial upfield displacement of peaks (up to 6 ppm). In addition, significantly reduced T₁^C values in uncomplexed nonactin (one order of magnitude smaller than those of other compounds) was ascribed to the presence of a puckering motion of the tetrahydrofuran ring and fluctuation of the macrocyclic ring in the solid state (with a time scale of 10⁻⁸ _s). Finally, how the conformations of these compounds in the solid are retained in chloroform solution was examined in view of the differences in the ¹³C chemical shifts between the solid and solution.     

NMR Investigations of Inclusion Complexes between β-Cyclodextrin and Naphthalene/Anthraquinone Derivatives

A ¹H and ¹³C NMR study on the inclusion complex between β-cyclodextrin and naphthalene, 1,5-dichloronaphthalene and 9,10-anthraquinone was carried out in order to define the stoichiometry of the association and the possible conformations. The upfield variation of the chemical shifts from the protons locate inside the cavity (H-3, H-5) coupled with the downfield variation of the other protons which locate outer sphere of the β-CD (H-1, H-2, H-4 and H-6,6′) provided clear evidence of the inclusion phenomena. The NMR spectra revealed the formation of 1:1 inclusion complex in which aromatic ring of the guest is tightly held by the host cavity. The signal degeneration of ¹H & ¹³C NMR spectra still exist for naphthalene and 1,5-dichloronaphthalene upon complexation revealed a symmetrical conformation of the guest molecules in the cavity of β-cyclodextrin, respectively. However, in 9,10-anthraquinone, the signal degeneration of ¹H & ¹³C NMR spectra was removed upon complexation which revealed an unsymmetrical conformation of the guest molecule inside the cavity. According to theoretical calculations and NMR studies, the possible conformations of the inclusion complexes are given here.     

Carbon-13 NMR spectra of some 4-substituted phenacyl bromides

The ¹³C NMR signals for some 4- substituted phenacyl bromides were assigned. The experimental chemical shifts of the aromatic ring carbons are in close agreement with those calculated using substituent chemical shifts. Both the carbonyl and the α-methylene carbons exhibit upfield shifts compared with those of the corresponding 4-substituted acetophenones.     

Electronic and steric effects in arylphosphoramidates and phosphorimidates as monitored by carbon-13 nuclear magnetic resonance

¹³C NMR chemical shifts and ¹³C? ³¹P couplings are reported for ten arylphosphoramidates and five arylphoshorimidates. The para-carbon chemical shifts in the phosphoramidates are interpreted in terms of substantial nitrogen lone pair delocalization into the aromatic ring, a phenomenon which is subject to steric inhibition of resonance. By contrast, in the phosphorimidates the electron release into the phenyl ring is not attenuated by steric congestion. Conformational changes about the aryl? N bond in all compounds have been monitored by vicinal ³¹P? N? C? ¹³C couplings.     

Proximity and the heteroatom effects on the carbon-13 chemical shifts of methyl-substituted phenols,anilines and thiophenols

Upfield substituent-induced ¹³C chemical shifts for aryl carbons of polymethyl substituted benzenes, phenols, anilines and thiophenols were investigated as a function of the proximity between substituents X and CH₃ (X = CH₃, NH₂, OH and SH). The results indicate that the induced shifts of the substituted aryl carbons are, in general, independent of the polar substituent but depend on the number of adjacent substituted aryl carbons. A ?2.0 ppm upfield shift was found for a substituted aryl carbon adjacent to one substituted aryl carbon and a ?3.8 ppm upfield shift for a substituted aryl carbon bound by two substituted aryl carbons. It is suggested that the near additivity of the upfield shifts is the result of changes in the bond order between the aromatic ring carbons in the region of the substituted aryl carbons due to distortion of the ring. The ¹³C chemical shifts of the methyl substituents for methyl substituted phenols, anilines and thiophenols were determined, and it was found that the values could be predicted from the additivity parameters reported for the analogous methylbenzenes plus an additional pair-interaction term associated with the through-space electronic influence of the heteroatom.     

Conformational equilibrium in 8-methyl-cis-2-thiahydrindane and 8-methyl-cis-2-oxahydrindane by 13C NMR spectroscopy

The preferred conformation of 8-methyl-cis-thiahydrindane has been both estimated by ¹³C NMR chemical shifts and determined by low temperature ¹³C NMR spectroscopy to be the conformer with the methyl group equatorial with respect to the cyclohexane ring. This result is in disagreement with the interpretation of the temperature dependence of the CD spectra of (+) and (?) 8-methyl-cis-2-thiahydrindane, whereby the conformation with the methyl group axial with respect to the cyclohexane ring was claimed to be the preferred conformation. The preferred conformation of the related oxygen heterocycle, 8-methyl-cis-2-oxahydrindane, has been estimated by ¹³C NMR chemical shifts to be the conformer with the methyl group axial with respect to the cyclohexane ring. Possible reasons for these observations are discussed.     

13C NMR spectra of benzothiazepinone,benzothiazinone and benzosulphonamide N-substituted derivatives

A comparative study of the ¹³C NMR spectra of benzothiazinone and benzothiazepinone dioxide derivatives and of some structurally related benzosulphonamides is presented. The size of the heterocyclic ring is reflected in the ¹³C chemical shifts and in the one-bond carbon-proton aromatic coupling constants. An upfield γ-effect of sulphur on the ¹³C chemical shifts in N-substituted carboxyethylbenzene-4,5-dimethoxysulphonamides is reported.     

Rotational isomerism—22: An nmr study of oh..π bonding and the conformations of benzyl alcohol and derivatives

The conformations of benzyl alcohol, the ortho and para nitro and methoxy derivatives and benzyl methyl ether have been investigated by NMR in CCL₄ and DMSO solutions. The ³J(CH.OH) and ²J(H.C.H) couplings (the latter via the ²J(H.C.D)coupling)and the OH chemical shift (in DMSO and ∞ dil^XXX as conformational probes. The δ_∞ (OH) for ROH (R = Me, Et, iPr) is also given.The results provide no support for the existence of an intramolecular H-bond in benzyl akohol The endo conformation of the OH proton (anti to a CH proton) is favoured by ca. 1 kcal mole^?1 over the exo conformation (H anti to phenyl) and these conformers are responsible for the separate OH frequencies observed in the IR spectrum. The results do not support an extreme conformation of the phenyl ring (C.C.C.O dihedrals of 0 or 90°) but are consistent with either an 6?0° conformation of the phenyl ring or a freely rotating model. In ortho nitrobenzyl alcohol intramolecular H-bonding is present, but in ortho methoxy benzyl alcohol little or no bonding to the substituent occurs.     

Temperature effects on 13C n.m.r. chemical shifts of normal alkanes and some line r and branched 1-alkenes

¹³C n.m.r. chemical shifts of a number of 1,1-disubstituted ethylenes are presented. Moreover, effects of changing temperatures on the ¹³C n.m.r. chemical shifts of some of these compounds as well as of three normal alkanes are given. These variations in chemical shifts are attributed to varying amounts of sterically induced shifts in the different conformational equilibria. In addition to the well-known 1,4 interaction between two alkyl groups shielding effects on the carbon atoms of the connecting bonds are also proposed. No definite explanation of this effect is presented at this time. It is further shown that no simple correlations exist between ¹³C n.m.r. chemical shifts and calculated total charge densities at this level. Instead, the experimental results in 1-alkenes are rationalized by assuming a linear dependence of the ¹³C n.m.r. chemical shifts of C-1 and C-2 via rehybridizations on changes in bond angles for small skeletal deformations caused by steric interactions. These changes in geometries, as well as conformational energies in three 1-alkenes, were calculated by means of VFF calculations. Finally. upfield shifts for both C-2 and C-4 are proposed for those conformations of 1-alkenes in which the C-3? C-4 group interacts with the p_z-orbital of C-2.     

Synthesis of new crown ethers and their metal complexes: 1H and 13C NMR study

A new type of crown ethers containing a diphenyl ether unit has been prepared, the ring size ranging from 12 to 36. ¹H and ¹³C NMR spectra of both free ligands and their metal-ion complexes have been recorded. For 18- and 21-membered compounds a general downfield shift was observed for both methylene and aromatic proton resonances on metal-ion complexation. The stoichiometry of K⁺ and Na⁺ complexes was deduced from chemical shift dependence on metal-ion concentration. The K⁺ and Na⁺ complexes of 18- and 21-membered rings have a guest to host ratio of 1:1, whereas the K⁺ salt of the 15-membered ring exists as a 1:2 complex in solution. The ¹H shift observed on salt formation was attributed to electric-field and conformational effects. The ¹³C resonances for the aryl carbons, C-1, C-2 and C-3, and the α-methylene carbon in 15- and 18-membered rings were shifted upfield when an equivalent amount of KSCN was added in CDCI_3?DMSO-d₆. The shift changes were independent of the anion, and similar results were obtained for SCN^?, Br^?, and I^? salts. The upfield shift is explained by conformational factors. The spectral changes were slight for 12- and 36-membered rings. In 15- and 18-membered rings, complexation induces conformational changes which force the C-α carbon into the plane of the benzene ring. The solution conformation of these molecules is discussed.     

A conformational NMR analysis of methymycin aglycones: complete and unambiguous assignments of stereochemically diverse glycosylated methymycin analogs by 1D and 2D NMR techniques and molecular modeling

The ¹H and ¹³C NMR spectra of 10‐deoxymethynolide (1), 8.9‐dihydro‐10‐deoxymethynolide (2) and its glycosylated derivatives (3–9) were analyzed using gradient‐selected NMR techniques, including 1D TOCSY, gCOSY, 1D NOESY (DPFGSENOE), NOESY, gHMBC, gHSQC and gHSQC‐TOCSY. The NMR spectral parameters (chemical shifts and coupling constants) of 1–9 were determined by iterative analysis. For the first time, complete and unambiguous assignment of the ¹H NMR spectrum of 10‐deoxymethynolide (1) has been achieved in CDCl₃, CD₃OD and C₆D₆ solvents. The ¹H NMR spectrum of 8,9‐dihydro‐10‐deoxymethynolide (2) was recorded in CDCl₃, (CD₃)₂CO and CD₃OD solutions to determine the conformation. NMR‐based conformational analysis of 1 and 2 in conjugation with molecular modeling concluded that the 12‐membered ring of the macrolactones may predominantly exist in a single stable conformation in all solvents examined. In all cases, a change in solvent caused only small changes in chemical shifts and coupling constants, suggesting that all glycosylated methymycin analogs exist with similar conformations of the aglycone ring in solution. Copyright © 2013 John Wiley & Sons, Ltd.     

17O, 13C and 1H NMR and IR spectral study of crowded ketones: possible intramolecular C—H···O interactions

Unusual behaviour was observed in the study of the ¹⁷O, ¹³C and ¹H NMR and IR spectra of crowded (1‐adamantyl)alkyl ketones. As the size of the alkyl substituent is increased, abnormal upfield chemical shifts in the ¹³C NMR and downfield shifts in the ¹⁷O NMR of the carbonyl group, as well as downfield shifts in the ¹H NMR of the adamantyl γ'‐protons, are found. In the IR spectrum, the ν_C?O stretching frequencies of the ketones with bulky substituents show considerable red shifts. Correlation of the NMR shifts with the number of γ‐carbon atoms of the alkyl substituents and comparison with the IR results indicated that there is an intramolecular through‐space CH···O interaction in crowded ketones. This was supported by the results of ab initio calculations. Copyright © 2002 John Wiley & Sons, Ltd.     

Effect of allylic strain on the conformations of diphenyl-substituted tetrahydro-1,3-oxazin-2-ones and hexahydropyrimidin-2-ones

The conformations of the cis and trans isomers of 4,6-diphenyl-, 4,5-diphenyl- and 5,6-diphenyltetrahydro-1,3-oxazin-2-one and 4,5-diphenylhexahydropyrimidin-2-one, and of some of their N-substituted derivatives, have been studied by ¹H NMR. Conformers with 4a, 6e-, 4a, 5e- and 5a, 6e-phenyl groups are preferred in the respective isomers of the N-H oxazinones, confirming a half-chair conformation of the ring. Allylic strain caused by N-substituents shifts strongly the a,e?e, a equilibria in trans-4,6-diphenyl- and cis-4,5-diphenyl-oxazinones, but only moderately the e,e?a,a equilibria in the compounds with trans-vicinal phenyl groups. In the latter, the diaxial conformation is preferred only in the case of bulky N-substituents. The diaxial conformation is more favoured in the trans-4,5-diphenylpyrimidones.     

119Sn Chemical Shifts in five- and six-coordinate organotin chelates

¹¹⁹Sn chemical shifts, δ(¹¹⁹Sn), relative to Me₄Sn in five- and six-coordinate organotin chelates were measured by means of FT NMR spectroscopy. ¹¹⁹Sn resonances were found to lie between ca. ?90 and ?330 ppm in the five-coordinate compounds and between ca. ?125 and ?515 ppm in the six-coordinate derivatives. thus δ(¹¹⁹Sn) moves upfield by 60–150 ppm with a change of the coordination number of tin from four to five and by 130–200 ppm from five to six. the δ(¹¹⁹Sn) values were shifted depending on the nature of chelating ligands and this shift was discussed in terms of the bonding between the ligand and tin. Replacement of methyl groups attached to tin by phenyl groups in five- and six-coordinate compounds induces upfield shifts in δ(¹¹⁹Sn) parallel to those found in four-coordinate organotin halides.     

DFT‐GIAO1H NMR chemical shifts prediction for the spectral assignment and conformational analysis of the anticholinergic drugs (−)‐scopolamine and (−)‐hyoscyamine

The relatively large chemical shift differences observed in the ¹H NMR spectra of the anticholinergic drugs (?)‐scopolamine 1 and (?)‐hyoscyamine 2 measured in CDCl₃ are explained using a combination of systematic/molecular mechanics force field (MMFF) conformational searches and gas‐phase density functional theory (DFT) single point calculations, geometry optimizations and chemical shift calculations within the gauge including/invariant atomic orbital (GIAO) approximation. These calculations show that both molecules prefer a compact conformation in which the phenyl ring of the tropic ester is positioned under the tropane bicycle, clearly suggesting that the chemical shift differences are produced by the anisotropic effect of the aromatic ring. As the calculations fairly well predict these experimental differences, diastereotopic NMR signal assignments for the two studied molecules are proposed. In addition, a cursory inspection of the published ¹H and ¹³C NMR spectra of different forms of 1 and 2 in solution reveals that most of them show these diastereotopic chemical shift differences, strongly suggesting a preference for the compact conformation quite independent of the organic or aqueous nature of the solvent. Copyright © 2010 John Wiley & Sons, Ltd.     

Quantum mechanical calculations on cellulose–water interactions: structures,energetics, vibrational frequencies and NMR chemical shifts for surfaces of Iα and Iβ cellulose

Periodic and molecular cluster density functional theory calculations were performed on the Iα (001), Iα (021), Iβ (100), and Iβ (110) surfaces of cellulose with and without explicit H₂O molecules of hydration. The energy-minimized H-bonding structures, water adsorption energies, vibrational spectra, and ¹³C NMR chemical shifts are discussed. The H-bonded structures and water adsorption energies (ΔE_ads) are used to distinguish hydrophobic and hydrophilic cellulose–water interactions. O–H stretching vibrational modes are assigned for hydrated and dry cellulose surfaces. Calculations of the ¹³C NMR chemical shifts for the C4 and C6 surface atoms demonstrate that these δ¹³C4 and δ¹³C6 values can be upfield shifted from the bulk values as observed without rotation of the hydroxymethyl groups from the bulk tg conformation to the gt conformation as previously assumed.     

Structural and conformational analysis of 1‐oxaspiro[2.5]octane and 1‐oxa‐2‐azaspiro[2.5]octane derivatives by 1H, 13C,and 15N NMR

A structural and conformational analysis of 1‐oxaspiro[2.5]octane and 1‐oxa‐2‐azaspiro[2.5]octane derivatives was performed using ¹H, ¹³ C, and ¹⁵ N NMR spectroscopy. The relative configuration and preferred conformations were determined by analyzing the homonuclear coupling constants and chemical shifts of the protons and carbon atoms in the aliphatic rings. These parameters directly reflected the steric and electronic effects of the substituent bonded to the aliphatic six‐membered ring or to C3 or N2. The parameters also were sensitive to the anisotropic positions of these atoms in the three‐atom ring. The preferred orientation of the exocyclic substituents directed the oxidative attack. Copyright © 2012 John Wiley & Sons, Ltd.     

13C n.m.r. spectra of lysergic acid derivatives: II—dihydrolysergamides

The conformations of dihydrolysergamides and 10-methoxydihydrolysergamides have been inferred from the study of the chemical shifts of the amide hydrogens and their temperature dependence. The ¹³C chemical shifts have been shown to be sensitive to conformational changes of the piperidine ring. The results indicate that the conformation of the latter depends both on the substituent in position 10 and on the solvent.     

NMR investigation on the conformational properties of N-[2-pyridyl-N-oxide]-amino derivatives

The proton NMR spectra of N-[2-pyridyl-N-oxide]-derivatives of primary and secondary ethylamines, containing a substituent R on the C atom bearing the amino function, have been completely analysed in terms of the fundamental NMR parameters. The preferred conformations of the compounds investigated were established by the indications from NOE experiments as well as: (1) the long range coupling across the five bond between the aminic hydrogen and the proton in 4-position of the pyridine-N-oxide ring (⁵J_m^H,NH ～ 0·5 c/s), (2) the value of the vicinal coupling constant in the fragment CHNH (³J_NHCH ～ 7–9 c/s), (3) the large deshielding (Δτ ～ 1–1·5 ppm) observed for the resonance position of the proton on the asymmetric C atom in secondary amine derivatives with respect to the corresponding primary ones, and (4) the diamagnetic shielding produced on protons in position 3 and 4 of the pyridine-N-oxide ring by different aromatic groups introduced in the R substituent.The NMR data confirmed the preferred rotamers previously suggested on the basis of ORD and CD measurements.     

Force field and multinuclear nmr study of the conformational properties of thiolane-1-oxide and its mono and dimethyl derivatives

Force field calculations and ¹H, ¹³C and ¹⁷O NMR data are reported for thiolane S-oxide and several of its mono and dimethyl derivatives. For comparison carbon-13 and oxygen-17 chemical shifts of the corresponding S-dioxides are also reported. According to force field calculations and NMR data the conformation of S-oxides depends on the number and on the position of ring substituents. Oxygen-17 chemical shifts of thiolane S-oxides are apparently not very sensitive to ring substitution and to the configuration of the sulfinyl group. This is however the result of conformational changes which cannot be easily predicted. For 2-methyl derivatives δ₁₇₀ allows an easy identification of the cis and trans isomers.