Synthesis and properties of new thiourea-functionalized poly(propylene imine) dendrimers and their role as hosts for urea functionalized guests

Five generations of poly(propylene imine) dendrimers have been modified by palmityl and adamantyl endgroups via a thiourea linkage. The synthesis of the thiourea dendrimers DAB-dendr-(NHCSNHAd)(n) and DAB-dendr-(NHCSNHC(16)H(33))(n) (n = 4, 8, 16, 32, 64) proceeds smoothly via the amino-terminated DAB dendrimer and the adamantyl and palmityl isothiocyanates, respectively. The properties of the thiourea dendrimers have been studied by IR and (1)H NMR, including relaxation (T1, T2) measurements. The thiourea dendrimers are used as multivalent hosts for a number of guest molecules containing a terminal urea-glycine unit in organic solvents. The host-guest interactions have been investigated using 1D- and NOESY-NMR. These investigations show that the guest molecules bind to the dendritic host via thiourea (host)-urea (guest) hydrogen bonding, and ionic bonding between the terminal guest carboxylate moiety and the outer shell tertiary amines of the dendrimer. The ability to bind guest molecules of the adamantyl- and palmitylthiourea dendrimers has been compared with their respective urea containing dendrimer analogues, by NMR-titration, and competition experiments. Upon complexation, the thiourea dendrimer hosts show a larger downfield NH shift than the corresponding urea dendrimer hosts, indicative of stronger hydrogen bonding in the complexed state. Furthermore, microcalorimetry has been used to determine binding constants for formation of the host-guest complexes; the binding constants are typically in the order of 10(4) M(-1). Both NMR and microcalorimetric studies show that the thiourea dendrimers bind the urea containing guests with somewhat higher affinity than the corresponding urea dendrimers.     

Structural elucidation of dendritic host-guest complexes by X-ray crystallography and molecular dynamics simulations

The multiple monovalent binding of adamantyl-urea poly(propyleneimine) dendrimers with carboxylic acid-urea guests was investigated using molecular dynamics simulations and X-ray crystallography to better understand the structure and behavior of the dynamic multivalent complex in solution. The results from the two methods are consistent and suggest a preferred molecular picture of this complicated aggregate of multiple components. The guest molecules can bind to the dendrimer in a variety of ways although most involve hydrogen-bonding interactions between urea groups of the dendrimer with urea and/or carboxylic acid groups of the guest. In addition, acid-base interactions between the carboxylic acid of the guest and the tertiary amine in the interior of the dendritic host are present. Our proposed structure gives important information about the predominant dynamic interactions between the host and guest and illustrates how they fit together and interact with each other.     

Study on elution behavior of poly(amidoamine) dendrimers and their interaction with bovine serum albumin in asymmetrical flow field-flow fractionation

Polyamidoamine (PAMAM) dendrimers have an amine surface and an ethylenediamine core and are of great interest in various applications such as in drug delivery. Physiochemical properties of PAMAM dendrimers vary with pH. At neutral to basic pH, PAMAM dendrimers are either weakly charged or uncharged and tend to adsorb on to the neutral packing material, making chromatographic separation of the dendrimers difficult. Asymmetrical flow field-flow fractionation (AsFlFFF) was tested as an alternative to the chromatographic techniques for separation of the PAMAM dendrimers. AsFlFFF provided generation-based separation of the dendrimers even at neutral and basic pH. The elution time increased gradually as the generation number (and thus the size) increased. Separation of impurities such as generational or missing-arm impurities and aggregates from the main population was also achieved. Electrostatic and hydrophobic interactions (e.g., repulsive elecrostatic interaction among the dendrimer molecules or attractive hydrophobic interaction between the dendrimer molecules and the membrane) may result in an inaccurate size measurement. Careful optimization of experimental conditions such as the flow rate, pH, and the salt concentration may be required to minimize the interactions with the membrane. AsFlFFF was also tested for a study on the interaction between the PAMAM dendrimers and proteins. AsFlFFF was able to show the growth in the size of bovine serum albumin (BSA) when BSA is mixed with increasing amounts of PAMAM dendrimers. Results suggest that, with proper optimization, AsFlFFF could become a useful tool for separation and characterization of large charged molecules such as PAMAM dendrimers.     

Enhancement of entrapping ability of dendrimers by a cubic silsesquioxane core

We report that a polyhedral oligomeric silsesquioxane (POSS) core can enhance the entrapping ability of dendrimers. Compared to the G2 PAMAM dendrimer, the G2 POSS-core dendrimer can entrap a larger amount of guest molecules without loss of affinity, and consequently, the water solubility of the entrapped guest molecules can be increased. In addition, we demonstrated that a fluorophore entrapped in the G2 POSS-core dendrimer was prevented from undergoing fluorescence photobleaching.     

Molecular recognition: comparative study of a tunable host-guest system by using a fluorescent model system and collision-induced dissociation mass spectrometry on dendrimers

Host-guest interactions between the periphery of adamantylurea-functionalized dendrimers (host) and ureido acetic acid derivatives (guest) were shown to be specific, strong and spatially well-defined. The binding becomes stronger when using phosphonic or sulfonic acid derivatives. In the present work we have quantified the binding constants for the host-guest interactions between two different host motifs and six different guest molecules. The host molecules, which resemble the periphery of a poly(propylene imine) dendrimer, have been fitted with an anthracene-based fluorescent probe. The two host motifs differ in terms of the length of the spacer between a tertiary amine and two ureido functionalities. The guest molecules all contain an acidic moiety (either a carboxylic acid, a phosphonic acid, or a sulfonic acid) and three of them also contain an ureido moiety capable of forming multiple hydrogen bonds to the hosts. The binding constants for all 12 host-guest complexes have been determined by using fluorescence titrations by monitoring the increase in fluorescence of the host upon protonation by the addition of the guest. The binding constants could be tuned by changing the design of the acidic part of the guest. The formation of hydrogen bonds gives, in all cases, higher association constants, demonstrating that the host is more than a proton sensor. The host with the longer spacer (propyl) shows higher association constants than the host with the shorter spacer (ethyl). The gain in association constants are higher when the urea function is added to the guests for the host with the longer spacer, indicating a better fit. Collision-induced dissociation mass spectrometry (CID-MS) is used to study the stability of the six motifs using the corresponding third generation dendrimer. A similar trend is found when the six different guests are compared.     

Guest–host chemistry with dendrimers: Stable polymer assemblies by rational design

A new type of guest has been designed and synthesized for the exo‐type supramolecular functionalization of adamantyl‐urea‐terminated poly(propylene imine) dendrimers. This new type of guest motif features a uriedo methane sulfonic acid moiety that binds very selectively to the surfaces of dendrimers via a combination of noncovalent interactions forming well‐defined complexes. The guest–host properties have been examined for a fifth‐generation adamantyl‐urea‐functionalized poly(propylene imine) dendrimer capable of binding 32 guest molecules and for a model host molecule that can bind only one guest molecule. The guest–host chemistry has been studied with ¹H NMR spectroscopy, nuclear Overhauser enhancement spectroscopy NMR spectroscopy, T₁‐relaxation NMR experiments, and IR spectroscopy. The 1:32 ratio with the dendrimer has been confirmed unambiguously from ¹H NMR spectra of the complex after size exclusion chromatography. Competition experiments with guests bearing a carboxylic acid instead of a sulfonic acid in the binding motif have demonstrated that the sulfonic acid has superior binding strength. Also, the importance of a combination of noncovalent interactions has been shown via competition experiments with a guest lacking the uriedo moiety. © 2004 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 42: 3792–3799, 2004     

Delivery and subcellular targeting of dendrimer-based fluorescent pH sensors in living cells

Synthesis and targeted delivery of dendrimer-based fluorescent biosensors in living HeLa cells are reported. Following electroporation dendrimers are shown to display specific subcellular localization depending on their size and surface charge and this property is preserved when they are functionalized with sensing moieties. We analyze the case of double dendrimer conjugation with pH-sensitive and pH-insensitive molecules leading to the realization of ratiometric pH sensors that are calibrated in vitro and in living cells. By tuning the physicochemical properties of the dendrimer scaffold sensors can be targeted to specific cellular compartments allowing selective pH measurements in different organelles in living cells. In order to demonstrate the modularity of this approach we present three different pH sensors with tuned H(+) affinity by appropriately choosing the pH-sensitive dye. We argue that the present methodology represents a general approach toward the realization of targetable ratiometric sensors suitable to monitor biologically relevant ions or molecules in living cells.     

Poly(amidoamine)-based dendrimer/siRNA complexation studied by computer simulations: effects of pH and generation on dendrimer structure and siRNA binding

In this work we report, compare and discuss the results obtained from fully atomistic molecular dynamics simulations of generations 4, 5, and 6 of PAMAM-based dendrimers having NH(3) and triethanolamine as cores, forming complexes with a short interfering RNA (siRNA) at different pH values and at physiological ionic strength. By employing a detailed analysis we demonstrate how features such as molecular size, structural details, and protonation level of this category of dendrimers affect the dendrimer/siRNA complexation. Properties like the conformational flexibility of the dendrimer, the effective charge distribution of the assembly, and the level of intra- and intermolecular hydrogen bonding between the two molecular entities are all found to play a significant role in the mutual interactions between the nucleic acid and the hyperbranched molecules. All these features are of key importance in the multifaceted mechanism of dendrimer/gene complexation, and their understanding can provide valuable insight toward the design of more efficient nucleic acid nanocarriers.     

Size‐Tunable Micron‐Bubbles Based on Fluorous–Fluorous Interactions of Perfluorinated Dendritic Polyglycerols

This paper describes the behavior of various generations of polyglycerol dendrimers that contain a perfluorinated shell. The aggregation in organic solvents is based on supramolecular fluorous–fluorous interactions, which can be described by means of ¹⁹F NMR spectroscopy. In order to study the interaction and aggregation phenomena of dendrimers with perfluorinated shell and perfluoro‐tagged guest molecules we investigated [G3.5]‐dendrimer with a perfluorinated shell in the presence of perfluoro‐tagged disperse red. Noteworthy, the interaction intensities varied in an unexpected manner depending on the equivalents of perfluoro‐tagged guest molecules added to the dendrimers in solution which then formed supramolecular complexes based on fluorous–fluorous interactions. We found that these complexes aggregated around residual air in the solvent to form stable micron‐sized bubbles. Their sizes correlated with the interaction intensities measured for certain dendrimer–guest molecule ratios. Degassing of the solutions led to a quasi phase separation between organic and fluorous phase, whereby the dendrimers formed the fluorous phases. Regassing the sample with air afforded bubbles of the initial size again.     

Computer simulation of chiral liquid crystal phases. IV. Intermolecular chirality transfer to rotamers in a cholesteric phase

Intermolecular chirality transfer was studied by investigating the conformational distribution of rotamers in a cholesteric guest-host phase using Monte Carlo (MC) simulations in the NVT ensemble. The guest-host system under investigation was given by N_c = 238 rigid, chiral Gay-Berne atropisomers as host molecules and N_a = 18 flexible Gay-Berne rotamers as guest molecules. The rigid, chiral Gay-Berne atropisomers of point symmetry group D₂ were defined by joining two Gay-Berne particles through a bond with a suitable fixed dihedral angle. The possibility of internal rotation about the bond axis without a rotational barrier was introduced as an internal degree of freedom for the guest molecules, for convenience denoted as Gay-Berne rotamers. Starting from an isotropic configuration, cholesteric phases were obtained on equilibrating the guest-host systems, whereby left-handed and right-handed cholesterics were formed depending on the M- and P-helicity of the atropisomers, respectively. Analysing the conformational distribution of the guest molecules in the cholesteric phase, we found an enantiomeric excess of rotamers of the guest molecules with the same helicity as the host molecules which is favoured on account of the intermolecular interactions in the cholesteric phase.     

Poly(propylene imine) dendrimers as hydrogen donor in Type II photoinitiated free radical polymerization

Three generations of poly(propylene imine) dendrimers, namely (PPI-16, PPI-32 and PPI-64; 16, 32 and 64 for generations 3, 4 and 5, respectively) were used as hydrogen donors in photoinitiated free radical polymerization of methyl methacrylate by using one of the following photosensitizers; benzophenone and thioxanthone. The effect of generation number of the dendrimer on photoinitiation efficiency and molecular weight of the resulting polymers was investigated. Glass transition temperatures and particle size measurements of the resulting polymers indicated the presence of nearly stretched polymer chains around the dendrimers. The location of hydrogen donating sites was evaluated by photolysis studies in the absence of monomer by using a stable radical namely, 2,2,6,6-tetramethylpiperidine-N-oxyl free radical (TEMPO) and showed that hydrogen abstraction occurs from the inner tertiary amino groups. The TEMPO attached dendrimers were further used in the nitroxide mediated radical polymerization (NMP) of styrene to yield star polymers.     

Synthesis of carbosilane dendritic wedges and their use for the construction of dendritic receptors

A divergent route for the synthesis of carbosilane wedges that contain either a bromine or amine as focal point has been developed. These new building blocks enable the construction of various core-functionalized carbosilane dendrimers. As a typical example carbosilane dendrimers up to the third generation containing a N,N',N'-1,3,5-benzenetricarboxamide core (G1-G3) have been synthesized. This new class of molecules has been studied as host molecules and they have been found to bind protected amino acids as guest molecules via hydrogen bonding interactions. A decrease in the association constants was observed for the higher generation dendritic hosts, which is attributed to the increased steric hindrance around the core where the binding site is located. The binding properties of the dendritic host molecules can be tuned by modifying the binding motif at the core of the carbosilane dendrimers. A higher association constant for N-CBZ-protected glutamic acid 1-methyl ester (5) was observed when the third generation N,N',N'-1,3,5-tris(L-alaninyl)benzenetricarboxamide core-functionalized carbosilane dendrimer (G3') was used as the host molecule compared to G3. Different association constants for the formation of the diastereomeric G3'.L-5(K=295 M(-1)) and G3'.(D-5)(2) (K=236 M(-1)) host-guest complexes were observed, pointing to a small enantioselective recognition effect. The difference between the association constants for the formation of the G3'.(L-5)(2) and G3'.(D-5)(2) host-guest complexes was much more pronounced, K=37 M(-1)versus K=10 M(-1), respectively.     

Polycationic (mixed) core-shell dendrimers for binding and delivery of inorganic/organic substrates

The convergent synthesis of a series of polycationic aryl ether dendrimers has been accomplished by a convenient procedure involving quantitative quaternarization of aryl(poly)amine core molecules. The series has been expanded to the preparation of the first polycationic, mixed core-shell dendrimer. All these dendrimers consist of an apolar core with a peripheral ionic layer which is surrounded by a less polar layer of dendritic wedges. These cationic, macromolecular species have been investigated for their ability to form assemblies with (anionic) guest molecules. The results obtained from UV/Vis and NMR spectroscopies, and MALDI-TOF-MS demonstrate that all the cationic sites throughout the dendrimer core are involved in ion pair formation with anionic guests giving predefined guest/host ratios up to 24. The large NMR spectroscopic shifts of resonances correlated with the groupings located in the core of the dendrimers, together with the relaxation time data indicate that the anionic guests are associated with the cationic core of these dendrimers. The X-ray molecular structure of the octacationic, tetra-arylsilane model derivative [Si(C6H3[CH2NMe3](2)-3,5)4]8+. 8I- shows that the iodide counterions are primarily located near the polycationic sphere. The new polycationic dendrimers have been investigated for their catalytic phase-transfer behavior and substrate delivery over a nanofiltration membrane.     

Importance of size-to-charge ratio in construction of stable and uniform nanoscale RNA/dendrimer complexes

Formation of RNA/dendrimer complexes between various RNA molecules and PAMAM dendrimers was studied using atomic force microscopy. Our results demonstrate that effective construction of stable nanoscale and uniform RNA/dendrimer complexes depends critically on the size of the RNA molecule, the dendrimer generation and the charge ratio between the dendrimer and the RNA. Larger RNA molecules, higher generations of dendrimers and larger dendrimer-to-RNA charge ratios lead to the formation of stable, uniform nanoscale RNA/dendrimer complexes. These findings provide new insights in developing dendrimer systems for RNA delivery.     

Polyvalent scaffolds. Counting the number of seats available for eosin guest molecules in viologen-based host dendrimers

We have prepared and investigated two dendrimers based on a 1,3,5-trisubstituted benzenoid-type core, containing 9 and 21 viologen units in their branches, respectively, and terminated with tetraarylmethane derivatives. We have shown that, in dichloromethane solution, such highly charged cationic species give rise to strong host-guest complexes with the dianionic form of the red dye eosin. Upon complexation, the absorption spectrum of eosin becomes broader and is slightly displaced toward lower energies, whereas the strong fluorescence of eosin is completely quenched. Titration experiments based on fluorescence measurements have shown that each viologen unit in the dendrimers becomes associated with an eosin molecule, so that the number of positions ("seats") available for the guest molecules in the hosting dendrimer is clearly established, e.g., 21 for the larger of the two dendrimers. The host-guest interaction can be destroyed by addition of chloride ions, a procedure which permits eosin to escape from the dendrimer's interior in a controlled way and to regain its intense fluorescence. When chloride anions are precipitated out by addition of silver cations, eosin molecules re-enter the dendrimer's interior and their fluorescence again disappears.     

微孔化合物生成中的结构导向与模板作用

本文详细总结了各种客体分子或离子在无机微孔化合物生成中的结构导向与模板作用。讨论了不同合成体系中,客体与无机骨架间的非键相互作用对生成骨架结构的影响以及分子模拟在研究主-客体关系、结构导向剂设计与筛选等方面的进展。无机或有机客体与无机骨架间关系规律的研究,有助于进一步理解结构导向剂(3ＤＡ)作用的机理和微孔化合物的晶化与生成机制,对特定结构微孔化合物的定向合成具有一定的意义。     

Self-association of rhodamine dyes in different host materials

The aggregation of rhodamine 6G in liquid crystalline solution (anisotropic host) was studied using polarised spectroscopy and in a guest-host system. The self-association of rhodamine B was investigated in molecular sieves of type AlPO(4)-5 (microporous host) using diffuse reflectance spectroscopy. Also, the molecular interaction of rhodamines in normal solvents (isotropic hosts) was studied using visible spectroscopy for comparison. Therefore, the role of the host nature in the different phases on the self-association of the guest molecules has been investigated and compared. The absorption spectrum of the rhodamine dye in liquid crystalline host is affected by a specific interaction related to the alignment by the liquid crystal property as well as solvent polarity. Due to the existence of a large amount of water molecules absorbed into channels and cavities of aluminophosphate molecular sieve, the maximum absorption wavelengths of the dye loaded AlPO(4)-5 is affected by aqueous environment of the aluminophosphate pores.     

Structural characterization of organosiloxane liquid crystals with a transverse or longitudinal dipole

In this work we report the characterization of two organosiloxane liquid crystalline compounds by means of DSC, polarizing optical microscopy and X-ray diffraction. These compounds can be used for dye guest-host ferroelectric displays. We focus this investigation on the molecular organization of the SmC phases of the two pure compounds to help elucidate the physical behaviour of mixtures with different concentrations of the dye and the guest host. The existence of longitudinal and transverse dipoles in the molecules of the dye and the chiral guest-host respectively are responsible for the different molecular organizations in the SmC mesophases of each compound. Taking into account the experimental results and the complexity of the molecules, we present coherent models to explain the molecular arrangements in the mesophases of both compounds.     

Highly emissive supramolecular oligo(p-phenylene vinylene) dendrimers

pi-Conjugated oligo(p-phenylene vinylene) (OPV) guest molecules for interaction with dendritic hosts were synthesized and fully characterized by NMR spectroscopy, MALDI-TOF-MS, elemental analysis and optical measurements. The binding properties of the five different OPV guests to a N,N-bis[(3-adamantyl ureido) propyl] methylamine host have been investigated. The guests that contained an aryl urea glycine spacer were bound with the highest association constant. Subsequently, an adamantyl urea modified fifth generation poly(propylene imine) dendrimer was synthesized as a multivalent host which contains 32 N,N-bis[(3-adamantyl ureido) propyl] amine binding sites. Size exclusion chromatography showed that 32 of the OPV guests strongly bind to the fifth generation adamantyl functionalized dendritic host. In the case of the supramolecular dendritic host/guest system smooth homogeneous thin films could be obtained by spin coating. The dendritic guest-host complexes showed a significantly higher emission upon binding then that of the individual molecules due to the three-dimensional orientation of the OPV guest molecules. In the solid state, this enhancement in luminescence was a factor of 10. The pi-conjugated oligomers are less aggregated in the supramolecular assemblies presumably because of a shielding effect of the bulky adamantyl units present in the hosts.     

Structural characterization of organosiloxane liquid crystals with a transverse or longitudinal dipole

In this work we report the characterization of two organosiloxane liquid crystalline compounds by means of DSC, polarizing optical microscopy and X-ray diffraction. These compounds can be used for dye guest-host ferroelectric displays. We focus this investigation on the molecular organization of the SmC phases of the two pure compounds to help elucidate the physical behaviour of mixtures with different concentrations of the dye and the guest host. The existence of longitudinal and transverse dipoles in the molecules of the dye and the chiral guest-host respectively are responsible for the different molecular organizations in the SmC mesophases of each compound. Taking into account the experimental results and the complexity of the molecules, we present coherent models to explain the molecular arrangements in the mesophases of both compounds.