Multivariate curve resolution–alternating least squares (MCR-ALS) applied to spectroscopic data from monitoring chemical reactions processes

This paper overviews the application of multivariate curve resolution (optimized by alternating least squares) to spectroscopic data acquired by monitoring chemical reactions and other processes. The goals of the resolution methods and the principles for understanding their applications are described. Some of the problems arising from these evolving systems and the limitations of the multivariate curve resolution methods are also discussed. This article reviews most of the applications of multivariate curve resolution applied to reacting systems published between January 2000 and June 2007. Some basic papers dated before 2000 have also been included.     

Ultrafast quantitation of six quinolones in water samples by second-order capillary electrophoresis data modeling with multivariate curve resolution–alternating least squares

This paper presents the development of a capillary electrophoresis method with diode array detector coupled to multivariate curve resolution–alternating least squares (MCR-ALS) to conduct the resolution and quantitation of a mixture of six quinolones in the presence of several unexpected components. Overlapping of time profiles between analytes and water matrix interferences were mathematically solved by data modeling with the well-known MCR-ALS algorithm. With the aim of overcoming the drawback originated by two compounds with similar spectra, a special strategy was implemented to model the complete electropherogram instead of dividing the data in the region as usually performed in previous works. The method was first applied to quantitate analytes in standard mixtures which were randomly prepared in ultrapure water. Then, tap water samples spiked with several interferences were analyzed. Recoveries between 76.7 and 125 % and limits of detection between 5 and 18 μg L^?1 were achieved.     

Direct determination of polymerized triglycerides in deep-frying olive oil by attenuated total reflectance–Fourier transform infrared spectroscopy using partial least squares regression

A partial least squares (PLS) regression model based on attenuated total reflectance–Fourier transform infrared spectra of heated olive oil samples has been developed for the determination of polymerized triacylglycerides (PTGs) generated during thermal treatment of oil. Three different approaches for selection of the spectral regions used to build the PLS model were tested and compared: (1) variable selection based on expert knowledge, (2) uninformative variable elimination PLS, and (3) interval PLS. Each of the three variable selection methods provided PLS models from heated olive oil samples with excellent performance for the prediction of PTGs in fried olive oils with comparable model statistics. However, besides a high coefficient of determination (R ² of 0.991) and low calibration, validation, and prediction errors of 1.14%, 1.21%, and 1.40% w/w, respectively, variable selection based on expert knowledge gave additionally almost identical low calibration (−0.0017% w/w) and prediction (−0.0023% w/w) bias. Furthermore, it was verified that the determination of PTGs was not influenced by the type of foodstuff fried in the olive oil.     

A new coupled wavelet-based method applied to the nonlinear reaction–diffusion equation arising in mathematical chemistry

In this paper, we have applied the wavelet-based coupled method for finding the numerical solution of Murray equation. To the best of our knowledge, until now there is no rigorous Legendre wavelets solution has been reported for the Murray equation. The highest derivative in the differential equation is expanded into Legendre series, this approximation is integrated while the boundary conditions are applied using integration constants. With the help of Legendre wavelets operational matrices, the Murray equation is converted into an algebraic system. Block pulse functions are used to investigate the Legendre wavelets coefficient vectors of nonlinear terms. The convergence of the proposed method is proved. Finally, we have given a numerical example to demonstrate the validity and applicability of the method. Moreover the use of proposed wavelet-based coupled method is found to be simple, efficient, less computation costs and computationally attractive.     

A synthetic approach to the phorboxazoles – A strategy for the synthesis of the C1–C19 polyketide fragment

A synthetic approach to the C1–C19 polyketide fragment of the phorboxazoles is disclosed here. While an initial two-directional approach was efficient, it did not proceed in a high enough yield to justify moving forward. A subsequent successful strategy for the generation of the C11–C15 pyrans of both of the phorboxazoles was achieved, and the installation of the C9 stereocenter was able to be demonstrated. Furthermore, an efficient route for the preparation of the C1–C8 fragment with suitable functionality to allow for elaboration into the complete C1–C19 fragment, with the capricious C2–C3 Z-geometry installed, was also achieved.     

A simple new general synthesis of macrocyclic ketones: A new entry to the synthesis of exaltone and (±)-muscone

We describe an efficient new synthesis of 15-membered cyclic ketones, exaltone and (±)-muscone, based on a three-carbon annelation of cyclic ketones followed by the regioselective radical cleavage of the fused bond of the resulting bicyclic systems.     

Comparison of performance of partial least squares regression,secured principal component regression,and modified secured principal component regression for determination of human serum albumin, γ-globulin and glucose in buffer solutions and in vivo blood glucose quantification by near-infrared spectroscopy

The performances of three multivariate analysis methods—partial least squares (PLS) regression, secured principal component regression (sPCR) and modified secured principal component regression (msPCR)—are compared and tested for the determination of human serum albumin (HSA), γ-globulin, and glucose in phosphate buffer solutions and blood glucose quantification by near-infrared (NIR) spectroscopy. Results from the application of PLS, sPCR and msPCR are presented, showing that the three methods can determine the concentrations of HSA, γ-globulin and glucose in phosphate buffer solutions almost equally well provided that the prediction samples contain the same spectral information as the calibration samples. On the other hand, when some potential spectral features appear in new measurements, sPCR and msPCR outperform PLS significantly. The reason for this is that such spectral features are not included during calibration, which leads to a degradation in PLS prediction performance, while sPCR and msPCR can improve their predictions for the concentrations of the analytes by removing the uncalibrated features from the original spectra. This point is demonstrated by successfully applying sPCR and msPCR to in vivo blood glucose measurements. This work therefore shows that sPCR and msPCR may provide possible alternatives to PLS in cases where some uncalibrated spectral features are present in measurements used for concentration prediction.     

The application of Fourier-transform Raman spectroscopy to the determination of conformation in poly(ε-caprolactam) chains

The Fourier-transform Raman spectra of various structural forms of poly(ε-caprolactam) have been obtained and the Raman bands characterizing planar and nonplanar conformation of the ε-caprolactam units have been defined. These bands have been used for the investigation of the conformational composition of ε-caprolactam sequences in several ε-caprolactam-butadiene block copolymers.     

A new route to the zizaane sesquiterpenes: An efficient synthesis of (±)-isokhusimone

A novel route to the zizaane sesquiterpene skeleton is demonstrated with a nine-step synthesis of (±)-isokhusimone (2) from norcamphor in an overall yield of 35%. This constitutes a formal synthesis of (±)khusimone (1).     

Heats of adsorption from the Dubinin-Astakhov model applied to the characterization of pillared interlayered clays (PILCs)

Heats of adsorption of organic molecules are a useful tool for the characterization of porosity and surface chemistry of microporous materials. This work describes the possibility of using heats of adsorption of organic molecules, estimated from a methodology derived from the Dubinin-Astakhov equation, for the characterization of Pillared Interlayered Clays. The estimated heats were compared with data determined directly by adsorption microcalorimetry. It is shown that the chemical nature of the organic probe molecule strongly conditions the obtained results. The best agreement between calculated and experimental values, amongst the probe molecules studied, was found for toluene.     

A new version of the conversion of plant polyprenols into (±)-terpenols of the dolichol series

A two-step method for the chemoselective reduction of the trisubstituted double bond of an α-isoprene unit in plant polyprenols was developed for the preparation of racemic terpenols of the dolichol series of mammals. Published inIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 8, pp. 1491–1492, August, 2000.     

Isomerization dynamics of the 2-phenylazo-1,3-dimethylimidazolium cation photoexcited to the S2 (π, π*) state as studied by transient absorption spectroscopy in the time domain of 10(-13) to 10(3) seconds

Photoinduced isomerization of a novel photochromic cation, [2PA-Mmim](+) (2-phenylazo-1,3-dimethylimidazolium cation), was studied by optical spectroscopic methods. The UV-Vis absorption spectra of the [2PA-Mmim](+) cation show two prominent bands starting around 410 and 520 nm, corresponding to the S(0)-S(2) (π, π*) and S(0)-S(1) (n, π*) transitions, respectively. The photoisomerization mechanism is studied by femtosecond time-resolved transient absorption experiments performed after S(0)-S(2) (π, π*) excitation in several solvents with different viscosity, including ionic liquids. The transient absorption signals at two representative wavelengths were fitted by bi-exponential functions, which yield four decay components. The photoisomerization mechanism is discussed in light of the relaxation schemes available for azobenzene. Only one of the components depends on the solvent viscosity and it changes from 1.2 ps (dichloromethane, 0.4 cP) to 5.6 ps ([Bmim][BF(4)], 93 cP). This component is assigned to a molecule at the S(1) state, which is responsible for the "rotational" isomerization. The weak dependence on the solvent viscosity of this component is explained in terms of local change in the viscosity as a result of local heating due to excess energy released at S(2)-S(1) internal conversion. The other three components of ～0.4, 1.0 and 10 ps are attributed to relaxation processes of the molecule at S(2), S(1) and S(0) states, respectively. The quantum yields for the forward E-Z photoisomerization are ～0.15 after S(2) excitation. The backward Z-E isomerization is slow with a lifetime of 1 hour and an activation energy of 91 kJ mol(-1) through an "inversion" mechanism.     

A study of peralkylated derivatives of bis(η6-benzene)chromium by gas-phase electronic absorption spectroscopy

The gas-phase electronic absorption spectra of (⁶-C₆R₆)₂Cr (R = Me (1) and Et (2)) reveal Rydberg structures, which disappear on going to the condensed phase. Each spectrum shows a Rydberg series converging to the ionization threshold. The first ionization potential determined as the series convergence limit is 4.662±0.008 eV for 1 and 4.667±0.019 eV for 2. The Rydberg bands are due to the transitions from the non-bonding MO 3d_z2 to the R4s and Rnp (n = 4—10) levels. The influence of methyl and ethyl substituents on the term values of the Rydberg transitions depends on the principal quantum number of the Rydberg MO.     

Pursuing new facts in the coordination capabilities of (1-diaminomethylene)thiourea (HATU): Products of the interaction with transition metal halides – Structural investigations

This work is part of our studies on the reactivity and crystal engineering of (1-diaminomethylene)thiourea (HATU). Structure and other properties of the selected products of the interaction of HATU with transition metal halides, also in the presence of 3% hydrogen peroxide as an oxidizing agent, have been investigated ((1) di-μ-((1-diaminomethylene)thiouron-1-ium)-κ⁴S:S-bis[chlorido((1-diaminomethylene)-thiouron-1-ium-κS)copper(I)] tetrachloride [(C₂H₇N₄S)₄Cu^I₂Cl₂]Cl₄, (2) catena(bis(3,5-diamino-1,2,4-thiadiazol-2-ium)-bis(μ₂-chlorido)-chloridocuprate(II)) [(C₂H₆N₄S)₂(Cu₂Cl₆)]_∞, (3) 3,5-diamino-1,2,4-thiadiazol-2-ium pentachloridoferrate(III) (C₂H₆N₄S)₂[FeCl₅], (4) 3,5-diamino-1,2,4-thiadiazol-2-ium chloride) (C₂H₆N₄S)Cl, (5) 3,5-diamino-1,2,4-thiadiazol-2-ium tetrachloridozincate(II) (C₂H₇N₄S)₂[ZnCl₄]. For (2) also magnetic properties have been characterized. Compound (3) contains unusual pentachloridoferrate(III) anions.     

Documentation of bioactive principles of the exudate gel (EG) from the stem of Caralluma retrospiciens (Ehrenb) and in vitro antibacterial activity – Part A

Caralluma retrospiciens (Ehrenb) is a desert plant widely distributed in the hilly semi-desert regions of southern part of Saudi Arabia. The exudate gel (EG) from the stem of plant is occasionally used for wound healing by the people of the southern part of Saudi Arabia. This study investigated the phytochemical composition, FT-IR, GC–MS spectral analysis and in vitro antibacterial activity of the EG from the stem of C. retrospiciens (Ehrenb). The plant C. retrospiciens (Ehrenb.) was collected from the hills of Rijal Almaa, a heritage village of Saudi Arabia. The EG was isolated from the stem of C. retrospiciens (Ehrenb.). Physical parameters such as viscosity and zeta potential (ZP) were determined. Phytochemical analysis, FT-IR and GC–MS spectroscopy analysis were performed to determine the bio active constituents. The antibacterial activity of the isolated gel was performed by in vitro agar well diffusion technique. The study demonstrated that the viscosity and ZP of EG influenced the efficacy of antibacterial spectral properties. The FT-IR spectroscopy of the EG showed various functional groups at 3278.29, 2951.16, 2840.44, 2527.55, 2161.67, 1647.40, 1450.06, 1406.7, 1286, 1108.34, 5536.63 cm⁻¹. Various pharmaceutically important chemical compounds were identified using GC–MS analysis. The bioactive compounds are “Sorbic Acid”, “Rhodopsin”, “1-Heptatriacotanol”, “Oxiraneundecanoic acid, 3-pentyl-, methyl ester, trans”, “Cholestan-3-ol, 2-methylene-, (3á,5à)”, “Benzoic acid”, “3-pentyl-, methyl ester trans”, “Hexanoic acid, 2-ethyl-, oxybis (2,1-ethanediyloxy-2,1-ethanediyl) ester”, etc. The antibacterial effect of the EG showed a wide spectrum of activity against the screened human pathogenic bacteria. The results demonstrate the bioactive principles of EG from C. retrospiciens (Ehrenb.) exerts the antibacterial properties in vitro.     

Helium mediated deposition: modeling the He-TiO2(110)-(1×1) interaction potential and application to the collision of a helium droplet from density functional calculations

This paper is the first of a two-part series dealing with quantum-mechanical (density-functional-based) studies of helium-mediated deposition of catalytic species on the rutile TiO(2)(110)-(1×1) surface. The interaction of helium with the TiO(2)(110)-(1×1) surface is first evaluated using the Perdew-Burke-Ernzerhof functional at a numerical grid dense enough to build an analytical three-dimensional potential energy surface. Three (two prototype) potential models for the He-surface interaction in helium scattering calculations are analyzed to build the analytical potential energy surface: (1) the hard-corrugated-wall potential model; (2) the corrugated-Morse potential model; and (3) the three-dimensional Morse potential model. Different model potentials are then used to study the dynamics upon collision of a (4)He(300) cluster with the TiO(2)(110) surface at zero temperature within the framework of a time-dependent density-functional approach for the quantum fluid [D. Mateo, D. Jin, M. Barranco, and M. Pi, J. Chem. Phys. 134, 044507 (2011)] and classical dynamics calculations. The laterally averaged density functional theory-based potential with an added long-range dispersion interaction term is further applied. At variance with classical dynamics calculations, showing helium droplet splashing out of the surface at impact, the time evolution of the macroscopic helium wave-function predicts that the helium droplet spreads on the rutile surface and leads to the formation of a thin film above the substrate. This work thus provides a basis for simulating helium mediated deposition of metallic clusters embedded within helium nanodroplets.