Simulating the optical properties of CdSe clusters using the RT-TDDFT approach

The structural and electronic properties of the CdSe nanoclusters, which have been intended to model quantum dots, have been examined by means of time-dependent density functional (TDDFT) calculations. The optical spectra were first simulated using the standard linear response implementation of the TDDFT (LR-TDDFT) in a series of calculations performed using different basis sets and exchange–correlation functionals. In a second step, the real-time TDDFT implementation (RT-TDDFT) was used to simulate the optical absorption spectra of the CdSe nanoclusters, both naked and capped with ligands. In general, we found that the RT-TDDFT approach successfully reproduced the optical spectrum of CdSe clusters offering a good compromise to render both the optical and the geometrical properties of the CdSe clusters at lower computational costs. While for small systems, the standard TDDFT is better suited, for medium- to large-sized systems, the real-time TDDFT becomes competitive and more efficient.     

Nonadiabatic couplings from time-dependent density functional theory: formulation in the Casida formalism and practical scheme within modified linear response

We present an efficient method to compute nonadiabatic couplings (NACs) between the electronically ground and excited states of molecules, within the framework of time-dependent density functional theory (TDDFT) in frequency domain. Based on the comparison of dynamic polarizability formulated both in the many-body wave function form and the Casida formalism, a rigorous expression is established for NACs, which is similar to the calculation of oscillator strength in the Casida formalism. The adiabatic local density approximation (ALDA) gives results in reasonable accuracy as long as the conical intersection (ci) is not approached too closely, while its performance quickly degrades near the ci point. This behavior is consistent with the real-time TDDFT calculation. Through the use of modified linear response theory together with the ground-state-component separation scheme, the performance of ALDA can be greatly improved, not only in the vicinity of ci but also for Rydberg transitions and charge-transfer excitations. Several calculation examples, including the quantization of NACs from the Jahn-Teller effect in the H3 system, have been given to show that TDDFT can efficiently give NACs with an accuracy comparable to that of wave-function-based methods.     

Nonadiabatic couplings from time-dependent density functional theory. II. Successes and challenges of the pseudopotential approximation

We present extensive calculations of nonadiabatic couplings (NACs) between the electronically ground and excited states of molecules, using time-dependent density functional theory (TDDFT) within (modified) linear response [C. Hu et al. J. Chem. Phys. 127, 064103 (2007)]. Our approach is implemented in the pseudopotential framework, with the consideration of nonlinear core corrections. The features of either the ordinary Jahn-Teller conical intersections in X(3) (X=Li, Na, K, Cu, Ag, Au) trimers, or the elliptic Jahn-Teller conical intersections in NaH(2), have been well reproduced. In particular, anticipated results for the H-H(2) collision near the avoided crossing are obtained, showing appealing improvement over the first, real-time, TDDFT calculation. The other important type of intersections, Renner-Teller glancing intersection, has also been studied for several typical molecular systems (BH(2), AlH(2), CH(2)(+), SiH(2)(+)), giving results in reasonable agreement with the theoretical model. Despite these successes, it is found that for some systems, including both Jahn-Teller and Renner-Teller systems, the pseudopotential scheme might give inaccurate results for some NAC components on nonhydrogen atoms. By trying different construction schemes of pseudopotentials, e.g., using local pseudopotentials, the results of NACs are found scheme-dependent and show improvement for some cases. Since there is much freedom in constructing ab initio nonlocal pseudopotentials, our findings on TDDFT calculation of NACs in the pseudopotential scheme might be helpful to give clues for constructing more "realistic" pseudopotentials.     

Dynamical quantum-electrodynamics embedding: Combining time-dependent density functional theory and the near-field method

We develop an approach for dynamical (ω > 0) embedding of mixed quantum mechanical (QM)∕classical (or more precisely QM∕electrodynamics) systems with a quantum sub-region, described by time-dependent density functional theory (TDDFT), within a classical sub-region, modeled here by the recently proposed near-field (NF) method. Both sub-systems are propagated simultaneously and are coupled through a common Coulomb potential. As a first step we implement the method to study the plasmonic response of a metal film which is half jellium-like QM and half classical. The resulting response is in good agreement with both full-scale TDDFT and the purely classical NF method. The embedding method is able to describe the optical response of the whole system while capturing quantum mechanical effects, so it is a promising approach for studying electrodynamics in hybrid molecules-metals nanostructures.     

Calculation of optical rotatory dispersion and electronic circular dichroism for tris-bidentate groups 8 and 9 metal complexes, with emphasis on exciton coupling

The optical rotatory dispersion (ORD, both non-resonant and resonant) and the electronic circular dichroism (CD) of tris-bidentate transition metal complexes of the form [M(L)(3)](n+) (M = Fe, Ru, Os, Co, Rh, Ir; n = 2, 3; L = 1,10-phenanthroline, 2,2'-bipyridine) are calculated using time-dependent density functional theory (TDDFT). The exciton CD band resulting from the coupling of ligand π-to-π* transitions is investigated in detail and analyzed in terms of exciton coupling of long-axis transitions using a dipole coupling model that takes TDDFT data for a single ligand as input. Results of the coupling model agree well with the full TDDFT CD spectra. The usefulness and reliability of this model is discussed. The resonant ORDs calculated directly from analytical damped linear TDDFT response compare well with Kramers-Kronig transformations of the calculated CD spectra. For comparisons of resonant ORD with experiment, one needs to consider wavelength shifts.     

Role of polyols (erythritol, xylitol and sorbitol) on the structural stabilization of collagen

A state-specific scheme for time-dependent density functional theory (SS-TDDFT) based on the Davidson algorithm is presented. SS-TDDFT is a method devised for speeding up TDDFT calculations by screening transitions that contribute to a specific excitation. By applying this method to calculations of the low-lying excitation energies of test molecules (N₂, CO, H₂CO, C₂H₄ and C₆H₆), water clusters and polyenes, we found that SS-TDDFT accurately reproduced the excitation energies of standard TDDFT while drastically reducing the rank of the TDDFT response matrix without loss of accuracy. We have thus formulated TDDFT that works more efficiently and economically for memory storage.     

A first-principles study of the influence of helium atoms on the optical response of small silver clusters

Optical excitation spectra of Ag(n) and Ag(n)@He(60) (n = 2, 8) clusters are investigated in the framework of the time-dependent density functional theory (TDDFT) within the linear response regime. We have performed the ab initio calculations for two different exact exchange functionals (GGA-exact and LDA-exact). The computed spectra of Ag(n)@He(60) clusters with the GGA-exact functional accounting for exchange-correlation effects are found to be generally in a relatively good agreement with the experiment. A strategy is proposed to obtain the ground-state structures of the Ag(n)@He(60) clusters and in the initial process of the geometry optimization, the He environment is simulated with buckyballs. A redshift of the silver clusters spectra is observed in the He environment with respect to the ones of bare silver clusters. This observation is discussed and explained in terms of a contraction of the Ag-He bonding length and a consequent confinement of the s valence electrons in silver clusters. Likewise, the Mie-Gans predictions combined with our TDDFT calculations also show that the dielectric effect produced by the He matrix is considerably less important in explaining the redshifting observed in the optical spectra of Ag(n)@He(60) clusters.     

A long-range-corrected time-dependent density functional theory

We apply the long-range correction (LC) scheme for exchange functionals of density functional theory to time-dependent density functional theory (TDDFT) and examine its efficiency in dealing with the serious problems of TDDFT, i.e., the underestimations of Rydberg excitation energies, oscillator strengths, and charge-transfer excitation energies. By calculating vertical excitation energies of typical molecules, it was found that LC-TDDFT gives accurate excitation energies, within an error of 0.5 eV, and reasonable oscillator strengths, while TDDFT employing a pure functional provides 1.5 eV lower excitation energies and two orders of magnitude lower oscillator strengths for the Rydberg excitations. It was also found that LC-TDDFT clearly reproduces the correct asymptotic behavior of the charge-transfer excitation energy of ethylene-tetrafluoroethylene dimer for the long intramolecular distance, unlike a conventional far-nucleus asymptotic correction scheme. It is, therefore, presumed that poor TDDFT results for pure functionals may be due to their lack of a long-range orbital-orbital interaction.     

Bright luminescence from silane substituted and bridged silicon nanoclusters

Time-dependent density functional theory (TDDFT) calculations show that silicon nanoclusters (Si-NC) capped by linear silane groups have large oscillator strengths of the same magnitude as reported in recent experimental studies. We propose a mechanism where linear silanes attached to the Si-NC surface affect the optical properties enhancing the oscillator strengths and thereby accounting for the bright luminescence observed in the blue region of the visible spectrum. The anisotropic emission seen experimentally can also be explained by the presence of the silane groups on the cluster surface. The excitation energies are found to be only slightly affected by the silanes, whereas the oscillator strengths increase with the length of the silane chain and are significantly larger than obtained for unsubstituted Si-NCs. In TDDFT studies of Si-NC dimers interconnected by a linear silane bridge, we obtained large oscillator strengths indicating that such structures could be useful light sources for optical devices.     

A TDDFT study of the optical response of DNA bases, base pairs, and their tautomers in the gas phase

We present calculations of the optical response of the DNA bases and base pairs both in their normal and tautomeric forms in the gas phase, using time-dependent density functional theory (TDDFT). These calculations are performed in real time within the adiabatic approximation with a basis of local orbitals. Our results for the individual bases are in good agreement with experiment and computationally more demanding calculations of chemical accuracy. The optical response of base pairs indicates that the differences between normal and tautomeric forms in certain cases are significant enough to provide a means of identification.     

On correlated electron-nuclear dynamics using time-dependent density functional theory

We discuss possibilities and challenges for describing correlated electron and nuclear dynamics within a surface-hopping framework using time-dependent density functional theory (TDDFT) for the electron dynamics. We discuss the recent surface-hopping method proposed by Craig et al. [Phys. Rev. Lett. 95, 163001 (2005)] that is based on Kohn-Sham potential energy surfaces. Limitations of this approach arise due to the Kohn-Sham surfaces generally having different gradients than the true TDDFT-corrected ones. Two mechanisms of the linear response procedure cause this effect: we illustrate these with examples.     

Highly efficient implementation of pseudospectral time‐dependent density‐functional theory for the calculation of excitation energies of large molecules

We have developed and implemented pseudospectral time‐dependent density‐functional theory (TDDFT) in the quantum mechanics package Jaguar to calculate restricted singlet and restricted triplet, as well as unrestricted excitation energies with either full linear response (FLR) or the Tamm–Dancoff approximation (TDA) with the pseudospectral length scales, pseudospectral atomic corrections, and pseudospectral multigrid strategy included in the implementations to improve the chemical accuracy and to speed the pseudospectral calculations. The calculations based on pseudospectral time‐dependent density‐functional theory with full linear response (PS‐FLR‐TDDFT) and within the Tamm–Dancoff approximation (PS‐TDA‐TDDFT) for G2 set molecules using B3LYP/6‐31G*^* show mean and maximum absolute deviations of 0.0015 eV and 0.0081 eV, 0.0007 eV and 0.0064 eV, 0.0004 eV and 0.0022 eV for restricted singlet excitation energies, restricted triplet excitation energies, and unrestricted excitation energies, respectively; compared with the results calculated from the conventional spectral method. The application of PS‐FLR‐TDDFT to OLED molecules and organic dyes, as well as the comparisons for results calculated from PS‐FLR‐TDDFT and best estimations demonstrate that the accuracy of both PS‐FLR‐TDDFT and PS‐TDA‐TDDFT. Calculations for a set of medium‐sized molecules, including C_n fullerenes and nanotubes, using the B3LYP functional and 6‐31G^** basis set show PS‐TDA‐TDDFT provides 19‐ to 34‐fold speedups for C_n fullerenes with 450–1470 basis functions, 11‐ to 32‐fold speedups for nanotubes with 660–3180 basis functions, and 9‐ to 16‐fold speedups for organic molecules with 540–1340 basis functions compared to fully analytic calculations without sacrificing chemical accuracy. The calculations on a set of larger molecules, including the antibiotic drug Ramoplanin, the 46‐residue crambin protein, fullerenes up to C₅₄₀ and nanotubes up to 14×(6,6), using the B3LYP functional and 6‐31G^** basis set with up to 8100 basis functions show that PS‐FLR‐TDDFT CPU time scales as N^2.05 with the number of basis functions. © 2016 Wiley Periodicals, Inc.     

Assessment of dressed time-dependent density-functional theory for the low-lying valence states of 28 organic chromophores

Almost all time-dependent density-functional theory (TDDFT) calculations of excited states make use of the adiabatic approximation, which implies a frequency-independent exchange-correlation kernel that limits applications to one-hole/one-particle states. To remedy this problem, Maitra et al. [N.T. Maitra, F. Zhang, R.J. Cave, K. Burke, Double excitations within time-dependent density functional theory linear response theory, J. Chem. Phys. 120 (2004) 5932 ] proposed dressed TDDFT (D-TDDFT), which includes explicit two-hole/two-particle states by adding a frequency-dependent term to adiabatic TDDFT. This paper offers the first extensive test of D-TDDFT, and its ability to represent excitation energies in a general fashion. We present D-TDDFT excited states for 28 chromophores and compare them with the benchmark results of Schreiber et al. [M. Schreiber, M.R. Silva-Junior, S.P.A. Sauer, W. Thiel, Benchmarks for electronically excited states: CASPT2, CC2, CCSD, and CC3, J. Chem. Phys. 128 (2008) 134110]. We find the choice of functional used for the A-TDDFT step to be critical for positioning the 1h1p states with respect to the 2h2p states. We observe that D-TDDFT without HF exchange increases the error in excitations already underestimated by A-TDDFT. This problem is largely remedied by implementation of D-TDDFT including Hartree-Fock exchange.     

Excited-State Electronic Structure with Configuration Interaction Singles and Tamm-Dancoff Time-Dependent Density Functional Theory on Graphical Processing Units

Excited-state calculations are implemented in a development version of the GPU-based TeraChem software package using the configuration interaction singles (CIS) and adiabatic linear response Tamm-Dancoff time-dependent density functional theory (TDA-TDDFT) methods. The speedup of the CIS and TDDFT methods using GPU-based electron repulsion integrals and density functional quadrature integration allows full ab initio excited-state calculations on molecules of unprecedented size. CIS/6-31G and TD-BLYP/6-31G benchmark timings are presented for a range of systems, including four generations of oligothiophene dendrimers, photoactive yellow protein (PYP), and the PYP chromophore solvated with 900 quantum mechanical water molecules. The effects of double and single precision integration are discussed, and mixed precision GPU integration is shown to give extremely good numerical accuracy for both CIS and TDDFT excitation energies (excitation energies within 0.0005 eV of extended double precision CPU results).     

Response calculations based on an independent particle system with the exact one-particle density matrix: excitation energies

Adiabatic response time-dependent density functional theory (TDDFT) suffers from the restriction to basically an occupied → virtual single excitation formulation. Adiabatic time-dependent density matrix functional theory allows to break away from this restriction. Problematic excitations for TDDFT, viz. bonding-antibonding, double, charge transfer, and higher excitations, are calculated along the bond-dissociation coordinate of the prototype molecules H(2) and HeH(+) using the recently developed adiabatic linear response phase-including (PI) natural orbital theory (PINO). The possibility to systematically increase the scope of the calculation from excitations out of (strongly) occupied into weakly occupied ("virtual") natural orbitals to larger ranges of excitations is explored. The quality of the PINO response calculations is already much improved over TDDFT even when the severest restriction is made, to virtually the size of the TDDFT diagonalization problem (only single excitation out of occupied orbitals plus all diagonal doubles). Further marked improvement is obtained with moderate extension to allow for excitation out of the lumo and lumo+1, which become fractionally occupied in particular at longer distances due to left-right correlation effects. In the second place the interpretation of density matrix response calculations is elucidated. The one-particle reduced density matrix response for an excitation is related to the transition density matrix to the corresponding excited state. The interpretation of the transition density matrix in terms of the familiar excitation character (single excitations, double excitations of various types, etc.) is detailed. The adiabatic PINO theory is shown to successfully resolve the problematic cases of adiabatic TDDFT when it uses a proper PI orbital functional such as the PILS functional.     

A visible light photocatalyst: effects of vanadium substitution on ETS-10

Hybrid density functional theory/molecular mechanics (DFT/MM) methods have been used to investigate the effects of vanadium substitution in ETS-10. Models have been developed to contain varying concentrations of V(IV) and V(V) within the O-M-O (M = Ti, V) chain. Most of the V-substituted models have a localized mid-gap state. The occupation of this localized state depends upon the dopant oxidation state, leading to the addition of multiple low energy transitions. A linear correlation has been identified between band gap energies estimated using ground state orbital energies and those calculated using the more accurate and computationally demanding time-dependent DFT (TDDFT) method for a variety of transition metal substituted models of ETS-10. Consistent with experimental data for V substitution, our models predict a decrease in the optical band gap with increasing [V], due to a lowering of the delocalized d-orbital states at the bottom of the conduction band with increasing V d-orbital character. This effect is more pronounced in the case of V(V) substitution than V(IV). Excitation energies for the V-doped models, calculated with TDDFT methods correlate well with experimental data, allowing for the assignment of specific optical transitions to experimental UV-Vis spectra. The electronic structure of V-substituted ETS-10 at high V concentration demonstrates band gap energies within the visible range of the spectrum. Additionally, at high [V] the band gap energy and presence of low energy electron traps can be controlled by the relative concentration of V(IV) and V(V) along the O-M-O chain, establishing V-substituted ETS-10 as a promising visible light photocatalyst.