Crystal structure of (2,2'-bipyridine-N,N)(2,2',2'-triaminotriethylamine-N,N',N',N')nickel(II) diperchlorate.

An X-ray structure determination shows that the Ni(II) ion is a distorted six-coordinated octahedron by four nitrogen atoms of the tetradentate tren ligand constituting the equatorial square base, and by two nitrogen atoms of the bidentate bpy ligand in a cis position. The two six-membered rings of bpy are coplanar and almost pararell. The tetradentate ligand consists of three five-membered chelate rings in gauche coformations. The Ni-N(tren) bond lengths of this complex are almost equivalent to the reported values.     

Crystal structure of (1,10-phenanthroline-N,N')(1,4,7,10-tetraazacyclododecane-N,N',N",N"')nickel(II) diperchlorate.

The crystal structure of the title compound, [Ni(C8H20N4)(C12H8N2)](ClO4)2, has been determined by X-ray diffraction. The Ni(II) ion is six coordinated with four nitrogen atoms of the tetradentate macrocyclic ligand and two nitrogen atoms of the bidentate ligand in a distorted octahedron geometry. The folded tetradentate macrocyclic ligand adopts a configuration having four five-membered chelate rings in distorted eclipsed conformations. The four hydrogen atoms of the amine groups of the macrocyclic ligand are on the same side towards the bidentate ligand.     

Metal- and ligation-dependent fragmentation of [M(1,10-Phenanthroline)(1,2,3)]2+ cations with M = Mn, Fe, Co, Ni, Cu, and Zn: Comparison between the gas phase and solution

The core ions [ML(n)]2+ with n = 1-3, where L = 1,10-phenanthroline and M is a first-row transition metal, have been successfully transferred from aqueous solution into the gas phase by electrospraying and then probed for their stabilities by collision-induced dissociation in a triple quadrupole mass spectrometer. The triply ligated metal dications [ML3]2+ were observed to dissociate by the extrusion of a neutral ligand, while ligand loss from both [ML2]2+ and [ML]2+ was accompanied by electron transfer. Comparisons are provided between gas-phase stabilities and stabilities for ligand loss measured in aqueous solution at 298 K. The measured onset for ligand loss from [ML3]2+ is quite insensitive to the metal, while a distinct stability order has been reported for aqueous solution. Low level density functional theory (DFT) calculations predict an intrinsic stability order for loss of ligand from [ML2]2+, but it differs from that in aqueous solution. Substantial agreement was obtained for the stability order for the loss of ligand from [ML]2+ deduced from onset energies measured for charge separation, computed with DFT, and reported for aqueous solution where hydration seems less decisive in influencing this stability order. A qualitative potential-energy diagram is presented that allows the energy for charge separation to be related to the energy for neutral ligand loss from [ML]2+ and shows that IE(M+) is decisive in determining the intrinsic stability order for loss of ligand from [ML]2+.     

Preparation,structure, and unexpected chemistry of phosphoranyl-derived benziodoxoles

Novel phosphoranyl-derived benziodoxoles were prepared by the reaction of 1-acetoxybenziodoxole with stabilized phosphonium ylides [1-triphenylphosphoranylidene-2-propanone and (carbomethoxymethyl)triphenylphosphoranylidene acetate]. X-ray crystallographic analysis of these compounds demonstrates the significance of secondary bonding interactions, which link individual molecules into infinite chains. An unusual ligand exchange on an iodine(III) center resulting in the substitution of a carbon ligand with an oxygen ligand was observed in the reaction of these compounds with strong acids.     

2, 2, 4, 13, 13, 15, —六甲基—1, 5, 12, 16—四氮杂环二十二烷—N′, N″′—二乙酸及其镧系配合物的合成和表征

本文合成了题头所示大环配体,并制备了它的十四种镧系元素(La～Lu,Pm除外)固体配合物.用元素分析,DTA-TG,红外光谱以及电导测定等手段研究了这些化合物的组成和性质.基于这些分析结果可建议配合物化学式为Ln(H₂L)(NO₃)₃·nH₂O.     

Structure, Stability, and Lability of Copper(II) Complexes with Triglycine

Equilibrium constants of complex formation, rate constants of chemical exchange reactions, and characteristics of electronic absorption spectra for species detected in aqueous solution of copper(II) with triglycine were determined, and conclusions on the structure of the complexes were made. A possibility of H-bond formation between the ammonium group of the zwitter-ionic form of the ligand and the second peptide oxygen in the anionic form of an adjacent ligand was shown. Kinetics and mechanisms of ligand and proton exchanges in solutions of copper(II) bistripeptide complexes with the ligand containing a deprotonated peptide nitrogen atom were studied. A new mechanism was proposed for hydroxide-catalyzed substitution reactions in copper(II) complexes with tripeptides.     

Azo dye with nitrogen donor sets of atoms and its metal complexes: Synthesis,characterization, DFT,biological, anticancer and Molecular docking studies

An azo derivative was synthesized by coupling diazotized 2,6‐diaminopyridine with p‐dimethyl amino benzaldehyde and this new ligand formed a series of metal complexes with Cr(III), Mn(II), Fe(III), Co(II), Ni(II), Cu(II), Zn(II) and Cd(II) salts. These complexes were characterized on the basis of elemental analyses, molar conductance, infrared spectroscopy, UV–Vis, ¹H NMR, mass spectrometry, electronic spectra, magnetic susceptibility and ESR spectral studies, conductivity measurements, thermogravimetric analyses (TG‐DTG). The molecular and electronic structure of the azo ligand was optimized theoretically and the quantum chemical parameters were calculated. The ligand and its metal complexes were subjected to X‐ray powder diffraction study. The thermal stability of the ligand and its metal complexes was examined by thermogravimetry. The ligand and its complexes were tested for their in vitro antimicrobial activity, some of the complexes showed good antimicrobial activities against some selected bacterial and fungal strains. Anticancer activity of the ligand and its metal complexes are evaluated against human cancer (MCF‐7 cells viability). Molecular docking was used to predict the binding between azo ligand and the receptors of nucleoside diphosphate kinase of Staphylococcus aureus (3Q8U) and (3HB5) which is breast cancer mutant oxidoreductase. The docking study provided useful structural information for inhibition studies.     

Synthesis,characterization, antifungal,antibacterial and DNA cleavage studies of some heterocyclic Schiff base metal complexes

Co(II), Ni(II), Cu(II) and Zn(II) complexes of the Schiff base derived from indole-3-carboxaldehyde and m-aminobenzoic acid were synthesized and characterized by elemental analysis, molar conductance, IR, UV–Vis, magnetic moment, powder XRD and SEM. The IR results demonstrate the bidentate binding mode of the ligand involving azomethine nitrogen and carboxylato oxygen atoms. The electronic spectral and magnetic moment results indicate that Co(II) and Ni(II) complexes have tetrahedral geometry, while Cu(II) complex is square planar. Powder XRD and SEM indicate the crystalline state and surface morphology studies of the complexes. The antimicrobial activity of the synthesized ligand and its complexes were screened by disc diffusion method. The results show that the metal complexes were found to be more active than the ligand. The nuclease activity of the ligand and its complexes were assayed on CT DNA using gel electrophoresis in the presence of H₂O₂. The Cu(II) complex showed increased nuclease activity in the presence of an oxidant when compared to the ligand and other complexes.     

Fine tuning of the oxidation locus, and electron transfer, in nickel complexes of pro-radical ligands

A large number of complexes of the first-row transition metals with non-innocent ligands has been characterized in the last few years. The localization of the oxidation site in such complexes can lead to discrepancies when electrons can be removed either from the metal center (leading to an M((n+1)+) closed-shell ligand) or from the ligand (leading to an M(n+) open-shell ligand). The influence of the ligand field on the oxidation site in square-planar nickel complexes of redox-active ligands is explored herein. The tetradentate ligands employed herein incorporate two di-tert-butylphenolate (pro-phenoxyl) moieties and one orthophenylenediamine spacer. The links between the spacer and both phenolates are either two imines ([Ni(L1)]), two amidates ([Ni(L3)]2-), or one amidate and one imine ([Ni(L2)]-). The structure of each nickel(II) complex is presented. In the noncoordinating solvent CH2Cl2, the one-electron-oxidized forms are ligand-radical species with a contribution from a singly occupied d orbital of the nickel. In the presence of an exogenous ligand, such as pyridine, a Ni(III) closed-shell ligand form is favored: axial ligation, which stabilizes the trivalent nickel in its octahedral geometry, induces an electron transfer from the metal(II) center to the radical ligand. The affinity of pyridine for the phenoxylnickel(II) species is correlated to the N-donor ability of the linkers.     

New azo‐azomethine‐based transition metal complexes: Synthesis,spectroscopy, solid‐state structure,density functional theory calculations and anticancer studies

A novel tetradentate azo‐Schiff base ligand (H₂L) was synthesized by 2:1 molar condensation of an azo‐aldehyde and ethylenediamine. Its mononuclear Cu(II), Ni(II), Co(II) and Zn(II) complexes were prepared and their structures were confirmed using elemental analysis, NMR, infrared and UV–visible spectroscopies and molar conductivity measurements. The results suggest that the metal ion is bonded to the tetradentate ligand through phenolic oxygens and imine nitrogens of the ligand. The solid‐state structures of the azo‐Schiff base ligand and its Cu(II) complex were determined using single‐crystal X‐ray diffraction studies. The azo‐Schiff base ligand lies on a crystallographic inversion centre and thus the asymmetric unit contains half of the molecule. X‐ray data revealed that keto–amine tautomer is favoured in the solid‐state structure of the ligand. In the structure of the Cu(II) complex, the Cu(II) ion is coordinated to two phenolate oxygen atoms and two imine nitrogen atoms of the azo‐Schiff base ligand with approximate square planar geometry. The anticancer activity of the synthesized complexes was investigated for human cancer cell line (MCF‐7) and cytotoxicity of the synthesized compounds was determined against mouse fibroblast cells (L929). The ligand and its complexes were found to show antitumor activity. The synthesized metal complexes were optimized at the B3LYP/LANL2DZ level and a new theoretical formula for MCF‐7 cells was also derived.     

Air stable,sterically hindered ferrocenyl dialkylphosphines for palladium-catalyzed C[bond]C,C[bond]N,and C[bond]O bond-forming cross-couplings

Pentaphenylferrocenyl di-tert-butylphosphine has been prepared in high yield from a two-step synthetic procedure, and the scope of various cross-coupling processes catalyzed by complexes bearing this ligand has been investigated. This ligand creates a remarkably general palladium catalyst for aryl halide amination and for Suzuki coupling. Turnovers of roughly 1000 were observed for aminations with unactivated aryl bromides or chlorides. In addition, complexes of this ligand catalyzed the formation of selected aryl ethers under mild conditions. The reactions encompassed electron-rich and electron-poor aryl bromides and chlorides. In the presence of catalysts containing this ligand, these aryl halides coupled with acyclic or cyclic secondary alkyl- and arylamines, with primary alkyl- and arylamines, and with aryl- and primary alkylboronic acids. These last couplings provide the first general procedure for reaction of terminal alkylboronic acids with aryl halides without toxic or expensive bases. The ligand not only generates highly active palladium catalysts, but it is air stable in solution and in the solid state. Palladium(0) complexes of this ligand are also air stable as a solid and react only slowly with oxygen in solution.     

Synthesis,structure, chemistry,and applications of tetravalent nickel complexes

This review provides an overview of the synthetic pathways, structures, and reactivity of various nickel(IV) complexes. The complexes are classified according to the various ligand types including sulfur, oxygen, nitrogen, and phosphorus donors. The main emphasis is on different ligand systems which stabilize Ni in higher oxidation state in the solid state and solution. The structural aspects of the complexes are briefly discussed. The possible applications of these nickel(IV) complexes are reviewed and future prospects are also highlighted.     

Surflex-Dock 2.1: Robust performance from ligand energetic modeling,ring flexibility,and knowledge-based search

The Surflex flexible molecular docking method has been generalized and extended in two primary areas related to the search component of docking. First, incorporation of a small-molecule force-field extends the search into Cartesian coordinates constrained by internal ligand energetics. Whereas previous versions searched only the alignment and acyclic torsional space of the ligand, the new approach supports dynamic ring flexibility and all-atom optimization of docked ligand poses. Second, knowledge of well established molecular interactions between ligand fragments and a target protein can be directly exploited to guide the search process. This offers advantages in some cases over the search strategy where ligand alignment is guided solely by a “protomol” (a pre-computed molecular representation of an idealized ligand). Results are presented on both docking accuracy and screening utility using multiple publicly available benchmark data sets that place Surflex’s performance in the context of other molecular docking methods. In terms of docking accuracy, Surflex-Dock 2.1 performs as well as the best available methods. In the area of screening utility, Surflex’s performance is extremely robust, and it is clearly superior to other methods within the set of cases for which comparative data are available, with roughly double the screening enrichment performance.     

Thiol-functionalized undecagold clusters by ligand exchange: synthesis, mechanism, and properties

Ligand exchange of phosphine-stabilized undecagold precursor particles, Au11(PPh3)8Cl3, with omega-functionalized thiols provides a convenient and general approach for the rapid preparation of large families of thiol-stabilized, subnanometer (dCORE approximately 0.8 nm) particles. The approach permits rapid incorporation of specific functionality into the stabilizing ligand shell, is tolerant of a wide range of functional groups, and provides convenient access to new materials inaccessible by other methods. Mechanistic studies and trapping experiments give insight into the progression of the ligand exchange, providing evidence that the core size of the phosphine-stabilized undecagold precursor particles is preserved during ligand exchange. The optical properties of the thiol-stabilized nanoparticles depend strongly on the composition of the ligand shell, and a series of studies suggests that this dependence is a result of the ligand shell's influence on the electronic structure of the particle core, as opposed to a structural change within the nanoparticle core.     

First-row transition-metal complexes of a new pentadentate ligand, alpha,alpha,alpha',alpha'-tetra(pyrazolyl)lutidine

A new pentadentate ligand, alpha,alpha,alpha',alpha'-tetra(pyrazolyl)lutidine, pz 4lut, has been prepared by a CoCl 2-catalyzed rearrangement reaction between 2,6-pyridinedicarboxaldehyde and dipyrazolylthione. The coordination chemistry with some divalent first-row transition metal (Mn, Fe, Co, Ni, Cu, and Zn) chlorides has been explored. The electronic properties indicate that the new kappa (5)N ligand is a slightly stronger-field donor to Ni (2+) and Co (2+) than a related pentadentate ligand with five pyridyl donors presumably because of greater interaction between the metal and axial pyridyl.     

A novel,C2-symmetric,chiral bis-cyclosulfinamide-olefin tridentate ligand in Rh-catalyzed asymmetric 1,4-additions

A C₂-symmetric, chiral bis-cyclosulfinamide-olefin ligand composed of two 1-oxo-2,3-dihydro-1,2-benzisothiazole moieties with rigid skeletons and a conformationally flexible butenylene chain is disclosed for the first time. HRMS and ¹H NMR analyses verify that the in situ-generated complex of the ligand and [Rh(C₂H₄)₂Cl]₂ possesses a rhodium (I) center coordinated to the tridentate ligand via two sulfinyl moieties and a CdbndC bond. The chiral ligand provided extremely high enantioselectivity (up to >99%ee) in the Rh-catalyzed asymmetric 1,4-additions of arylboronic acids to cyclohexenone and cyclopentenone. The tridentate ligand gave much higher enantioselectivity than the analogous chiral bidentate ligands.     

Syntheses,structures, and fluxionality of blue luminescent zinc(II) complexes: Zn(2,2',2"-tpa)Cl2, Zn(2,2',2"-tpa)2(O2CCF3)2, and Zn(2,2',3"-tpa)4(O2CCF3)2 (tpa = tripyridylamine)

Three novel Zn(II) complexes containing either 2,2',2"-tripyridylamine (2,2',2"-tpa) or 2,2',3"-tripyridylamine (2,2',3"-tpa) have been synthesized and structurally characterized. Compound 1, Zn(2,2',2"-tpa)Cl2, has a tetrahedral geometry while compounds 2, Zn(2,2',2"-tpa)2(O2CCF3)2, and 3, Zn(2,2',3"-tpa)4(O2CCF3)2, have an octahedral geometry. The 2,2',2"-tpa ligand in 1 and 2 functions as a bidentate ligand, chelating to the zinc center, while the 2,2",3"-tpa ligand in 3 functions as a terminal ligand, binding to the zinc center through the 3-pyridyl nitrogen atom. All three compounds emit a blue color in solution and in the solid state. The emission maxima for the three compounds in solution are at lambda = 422, 426, and 432 nm, respectively. The blue luminescence of the complexes is due to a pi *-->pi transition of the tpa ligand as established by an ab initio calculation on the free ligand 2,2',2"-tpa and complex 1. Compounds 1 and 2 are fluxional in solution owing to an exchange process between the coordinate and noncoordinate 2-pyridyl rings of the 2,2',2"-tpa ligand. Compound 2 is also fluxional owing to a cis-trans isomerization process, as determined by variable-temperature 1H NMR spectroscopic analysis.     

Synthesis, structural features, absorption spectra, redox behaviour and luminescence properties of ruthenium(ii) rack-type dinuclear complexes with ditopic, hydrazone-based ligands

The isomeric bis(tridentate) hydrazone ligand strands 1 a-c react with [Ru(terpy)Cl3] (terpy=2,2':6',2'-terpyridine) to give dinuclear rack-type compounds 2 a-c, which were characterised by several techniques, including X-ray crystallography and NMR methods. The absorption spectra, redox behaviour and luminescence properties (both in fluid solution at room temperature and in rigid matrix at 77 K) of the ligand strands 1 a-c and of the metal complexes 2 a-c have been studied. Compounds 1 a-c exhibit absorption spectra dominated by intense pi-pi* bands, which, in the case of 1 b and 1 c, extend within the visible region, while the absorption spectra of the rack-type complexes 2 a-c show intense bands both the in the UV region, due to spin-allowed ligand-centred (LC) transitions, and in the visible, due to spin-allowed metal-to-ligand charge-transfer (MLCT) transitions. The energy position of these bands strongly depends on the ligand strand: in the case of 2 a, the lowest energy MLCT band is around 470 nm, while in 2 b and 2 c, it lies beyond 600 nm. Ligands 1 a-c undergo oxidation processes that involve orbitals based mainly on the CH3--N--N== fragments. The complexes 2 a-c undergo reversible metal-centred oxidation, while reductions involve the hydrazone-based ligands: in 2 b and 2 c, the bridging ligand is reduced twice and in 2 a once before reduction of the peripheral terpy ligands takes place. Ligands 1 a-c exhibit luminescence from the lowest-lying 1pi-pi* level. Only for complex 2 a does emission occur; this may be attributed to a 3MLCT state involving the bridging ligand. Taken together, the results clearly indicate that the structural variations introduced translate into interesting differences in the spectroscopic, luminescence and redox properties of the ligand strands as well as of the rack-type metal complexes.     

Functionalized pentamethylferrocenes: Synthesis, structure, and electrochemistry

The advantageous properties of the Cp^* ligand — intensified electron donation, steric bulk, and enhanced solubility in comparison to the ubiquitous Cp ligand — are finding increasing use in organometallic chemistry. A systematic evaluation of synthetic routes to pentamethylferrocene compounds with a wide range of functionalities, including carboxyl, carbonyl, aminomethyl, vinyl, ethynyl, fulvenyl, cyclopentadienylmethyl, and others is reported. Spectroscopic, structural, and electrochemical properties of such functionalized pentamethylferrocenes Fc^*/2—R are compared to those of non-methylated ferrocenes Fc—R. The electronic influence of the Cp^* ligand in these unsymmetricalferrocenes Fc^*/2—R has been studied by cyclic voltammetry measurements, demonstrating a decrease in oxidation potential of −0.276 V in direct comparison to non-methylated ferrocenes Fc—R.     

Platinum-catalysed allylic alkylation: reactivity, enantioselectivity, and regioselectivity

The use of platinum complexes as catalysts for allylic substitution has been studied. A variety of different complexes catalyse the reaction, and several substrates have been tested. In the alkylation of mono(alkyl)-substituted allylic acetates, regioselectivity is highly dependent on ligand choice. By using tricyclohexylphosphine as the ligand, almost complete formation of branched products is observed. The development of a highly enantioselective (ca. 80-90% ee) reaction that makes use of chiral diphenylphosphinooxazoline ligands (abbreviated as (S)-PN) is also described. The enantioselectivity is highly dependent on the ratio of ligand to platinum (when the ratio ligand/Pt is greater than 1:1, the ee drops off dramatically). This is in contrast to palladium and is interpreted in terms of differing coordination chemistry for the two metals ((S)-PN is hemilabile when complexed to platinum) and should be of significance to future systems that utilise heterobidentate ligands. The crystal structures of two isoelectronic platinum and palladium complexes [[(S)-PN]MCl2] are also described.