Synthesis, characterization and electrochemical behavior of unsymmetric transition metal-terminated biphenyl ethynyl thiols

The synthesis of the biphenyl alkynyl thiols and thioesters R′-CC-C₆H₄-C₆H₄-SR (3: R′ = SiMe₃, R = C(O)Me; 4: R′ = SiMe₃, R = H; 5: R′ = H, R = C(O)Me) from I-C₆H₄-C₆H₄-SC(O)Me (1) is described. Molecules 1 and 5 have been used as starting materials in the synthesis of mono- and heterobimetallic transition metal complexes of type L_nM′-CC-C₆H₄-C₆H₄-SR (7: L_nM′ = Fc, R = C(O)Me; 8: L_nM′ = Fc, R = H; 10: L_nM′ = (Ph₃P)Au, R = C(O)Me; 14: L_nM′ = FcPPh₂-Au, R = C(O)Me; Fc = (η⁵-C₅H₅)(η⁵-C₅H₄)Fe; FcPPh₂ = (η⁵-C₅H₅)(η⁵-C₅H₄PPh₂)Fe). While complex 7is accessible by the Sonogashira cross-coupling of Fc-CCH (6) with 1, molecules 10 and 14 can be prepared by treatment of the thioester 5 with (Ph₃P)AuCl (9) and FcPPh₂-AuCl (13), respectively.The molecular solid state structures of 3, 7, 10 and 13-15 have been determined by single crystal X-ray crystallographic analysis. Typical features of these species are their linear M-CC-C₆H₄-C₆H₄-SR structure and the lack of coplanarity of the biphenyl arene rings. The overall length of these complexes are 13.345(2) Å for 3 (molecule A), 15.146(3) Å for 7, 15.705(2) Å for 10 (molecule A) and 15.649(4) Å for 14. The thioester groups are pointing away from the ferrocene building block. In 7 a linear 1D chain is set-up by π-interactions between two independent molecules of 7. Characteristic for 15 is the formation of a Au₂I₂ ring, while 13 is monomeric.All compounds were studied with cyclic voltammetry. Characteristic are the reversible ferrocene Fe(II)/Fe(III) redox wave, the irreversible reduction of Au(I) to Au(0), the oxidative cleavage of the S-C(O)Me sulfur-carbon (3, 5, 7, 10 and 14) and of the sulfur-hydrogen bond (4 and 8), respectively. Electronic effects extending from the -SH-end group to the ferrocene unit resulting in considerable shifts of the redox potential of the latter entity are found. Coordination of Au(I) at the FcPPh₂ moiety also results in a shift of the redox potential of the ferrocene group indicative of an electron withdrawing effect of the Au(I) species.     

Self-assembled monolayers of aromatic thiols stabilized by parallel-displaced pi-pi stacking interactions

Parallel-displaced pi-pi stacking interactions have been known to be the dominant force in stabilizing the double helical structure of DNA and the tertiary structure of proteins. However, little is known about their roles in self-assembled monolayers of other large pi molecules such as aromatic thiols. Here we report on a systematic study of the self-assembled monolayers of four kinds of anthracene-based thiols, 9-mercaptoanthracene (MA), (4-mercaptophenyl) (9-anthryl) acetylene (MPAA), (4-mercaptophenyl) (10-nitro-9-anthryl) acetylene (MPNAA), and (4-mercaptophenyl) (10-carboxyl-9-anthryl) acetylene (MPCAA) on Au(111), in which a spacer and different functional groups (NO2 and COOH) are intentionally designed to introduce and thus allow the investigation of various intermolecular interactions, in addition to pi-pi interactions in the base molecules. We find that all molecules form long-range-ordered monolayers and, more interestingly, that these assembled monolayers exhibit essentially the same fundamental packing structure. On the basis of high-resolution scanning tunneling microscopy observations, we propose the space-filling models for the observed superstructures and demonstrate that all superstructures can be understood in terms of the parallel-displaced pi-pi stacking interactions, despite the presence of competing dipole-dipole and H-bonding interactions associated with these specially designed functional groups.     

Self-assembled monolayers of alkaneselenolates on (111) gold and silver

Self-assembled monolayers (SAMs) formed from didodecyl diselenide (C12SeSeC12) and didodecyl selenide (C12SeC12) on (111) Au and Ag substrates were extensively characterized by several complementary techniques. C12SeSeC12 was found to form contamination-free, densely packed, and well-ordered C12Se SAMs on both substrates, whereas the adsorption of C12SeC12 occurred only on Au and resulted in the formation of a SAM-like C12SeC12 film with a low packing density and a conformational disorder. The properties of the C12Se SAMs were compared with those of dodecanethiolate (C12S) SAMs. The packing density, orientational order, and molecular inclination in C12Se/Au and C12S/Au were found to be very similar. In contrast, C12Se/Ag exhibited significantly lower packing density, a lower degree of the conformational and orientational order, and a larger molecular inclination than C12S/Ag. The results suggest a sp3 bonding configuration for the selenium atom on Au and Ag and indicate a larger corrugation of the headgroup-substrate binding energy surface in C12Se/Ag than in C12S/Ag.     

Nanoscale clustering of carbohydrate thiols in mixed self-assembled monolayers on gold

Self-assembled monolayers (SAMs) bearing pendant carbohydrate functionality are frequently employed to tailor glycan-specific bioactivity onto gold substrates. The resulting glycoSAMs are valuable for interrogating glycan-mediated biological interactions via surface analytical techniques, microarrays, and label-free biosensors. GlycoSAM composition can be readily modified during assembly by using mixed solutions containing thiolated species, including carbohydrates, oligo(ethylene glycol) (OEG), and other inert moieties. This intrinsic tunability of the self-assembled system is frequently used to optimize bioavailability and antibiofouling properties of the resulting SAM. However, until now, our nanoscale understanding of the behavior of these mixed glycoSAMs has lacked detail. In this study, we examined the time-dependent clustering of mixed sugar + OEG glycoSAMs on ultraflat gold substrates. Composition and surface morphologic changes in the monolayers were analyzed by X-ray photoelectron spectroscopy (XPS) and atomic force microscopy (AFM), respectively. We provide evidence that the observed clustering is consistent with a phase separation process in which surface-bound glycans self-associate to form dense glycoclusters within the monolayer. These observations have significant implications for the construction of mixed glycoSAMs for use in biosensing and glycomics applications.     

Self-assembled monolayers of dendron thiols for electrodeposition of gold nanostructures: toward fabrication of superhydrophobic/superhydrophilic surfaces and pH-responsive surfaces

This paper describes the fabrication of surfaces with different wettability, superhydrophobic/superhydrophilic, and pH-responsive properties. We used a self-assembled monolayer (SAM) of a dendron thiol as the underlying surface for electrodeposition of gold nanostructures. After this modification with a SAM of n-dodecanethiol or 11-mercaptoundecanol, the surface shows remarkable superhydrophobic properties with a contact angle of about 155 degrees and a tilt angle of less than 2 degrees or superhydrophilic properties with a contact angle of about 0 degrees , respectively. Moreover, a large-scale pH-responsive surface was obtained by modification with 2-(11-mercaptoundecanamido)benzoic acid (7) (MUABA). The pH-responsive behavior was amplified by using rough surfaces.     

Preparing metal-complex surfaces based on self-assembled monolayers of thiols and disulfides on gold

The complexation of monolayers of sulfur-containing ligands self-assembled on surface of gold with Co(II) and Cu(II) ions is studied using quartz crystal microbalance (QCM) and wetting measurements. The optimum conditions for obtaining metal-complex surfaces and the compositions of the resulting monolayers are determined.     

Self-assembled monolayers of peptide nucleic acids on gold surfaces: a spectroscopic study

We have characterized self-assembled monolayers (SAMs) of thiol-derivatized peptide nucleic acid (PNA) chains adsorbed on gold surfaces by using reflection absorption infrared spectroscopy (RAIRS) and X-ray photoemission spectroscopy (XPS) techniques. We have found that the molecular orientation of PNAs strongly depends on surface coverage. At low coverage, PNA chains lie flat on the surface, while at high coverage, PNA molecules realign their molecular axes with the surface normal and form SAMs without the need of co-immobilization of spacers or other adjuvant molecules. The change in the molecular orientation has been studied by infrared spectroscopy and it has been confirmed by atomic force microscopy (AFM). PNA immobilization has been followed by analyzing the N(1s) XPS core-level peak. We show that the fine line shape of the N(1s) core-level peak at optimal concentration for biosensing is due to a chemical shift. A combination of the above-mentioned techniques allow us to affirm that the structure of the SAMs is stabilized by molecule-molecule interactions through noncomplementary adjacent nucleic bases.     

Self-assembled monolayers on Au microelectrodes

Long chain alkanethiols self-assembled monolayers (SAMs) formed on Au microelectrodes showed higher sensitivity towards defects than the same monolayers on macroelectrodes. The analysis of cyclic voltammetry and electrochemical impedance spectroscopy (EIS) experiments performed on covered microelectrodes were consistent with the formation of pinholes of about 10 nm in diameter. Moreover, the EIS data exhibited a specific behavior that was interpreted invoking the short circuiting of the pinholes impedance by the surrounding surface of the microelectrode in the high frequency domain, whereas in the low frequencies, the surface covered by the SAM was assume to act as an insulator.     

Self-assembled monolayers of dendritic polyglycerol derivatives on gold that resist the adsorption of proteins

Highly protein-resistant, self-assembled monolayers (SAMs) of dendritic polyglycerols (PGs) on gold can easily be obtained by simple chemical modification of these readily available polymers with a surface-active disulfide linker group. Several disulfide-functionalized PGs were synthesized by N,N'-dicyclohexylcarbodiimide-mediated ester coupling of thioctic acid. Monolayers of the disulfide-functionalized PG derivatives spontaneously form on a semitransparent gold surface and effectively prevent the adsorption of proteins, as demonstrated by surface plasmon resonance (SPR) kinetic measurements. A structure-activity relationship relating the polymer architecture to its ability to effectuate protein resistance has been derived from results of different surface characterization techniques (SPR, attenuated total reflectance infrared (ATR-IR), and contact-angle measurements). Dendritic PGs combine the characteristic structural features of several highly protein-resistant surfaces: a highly flexible aliphatic polyether, hydrophilic surface groups, and a highly branched architecture. PG monolayers are as protein resistant as poly(ethylene glycol) (PEG) SAMs and are significantly better than dextran-coated surfaces, which are currently used as the background for SPR spectroscopy. Due to the higher thermal and oxidative stability of the bulk PG as compared to the PEG and the easy accessibility of these materials, dendritic polyglycerols are novel and promising candidates as surface coatings for biomedical applications.     

Electrochemical and surface analytical studies of self-assembled monolayers of three aromatic thiols on gold electrodes

Three thiols with three aromatic rings and different structure – terphenyl-4-methanethiol (TPMT), terphenyl-4-thiol (TPT), and anthracene-2-thiol (AT) – have been used to form self-assembled monolayers (SAM) on vapour-deposited and flame-annealed Au films on glass substrates. All three SAMs effectively block the anodic formation of Au oxide, indicating densely packed layers which prevent the access of water and hydrated ions through the organic layer to the metal surface. The film improves its inhibiting properties with duration of exposure to the thiol solutions, reaching completion after 1 hour [1]. The charge-transfer reaction of the Fe(CN)₆ ^3–/Fe(CN)₆ ^4– system is blocked for TPMT films with an insulation of the π-electron system from the Au surface by the methylene group. TPT and especially AT films show the current density of the redox reactions. It is proposed that the charge transfer occurs via the aromatic molecules of the SAMs to the Au surface. Electronic Publication     

Multiscale charge injection and transport properties in self-assembled monolayers of biphenyl thiols with varying torsion angles

This article describes the molecular structure-function relationship for a series of biphenylthiol derivatives with varying torsional degree of freedom in their molecular backbone when self-assembled on gold electrodes. These biphenylthiol molecules chemisorbed on Au exhibit different tilt angles with respect to the surface normal and different packing densities. The charge transport through the biphenylthiol self-assembled monolayers (SAMs) showed a characteristic decay trend with the effective monolayer thickness. Based on parallel pathways model the tunneling decay factor β was estimated to be 0.27??(-1) . The hole mobility of poly(3-hexylthiophene)-based thin-film transistors incorporating a biphenylthiol SAM coating the Au source and drain electrodes revealed a dependence on the injection barrier with the highest occupied molecular orbital (HOMO) level of the semiconductor. The possible role of the resistivity of the SAMs on transistor electrodes on the threshold voltage shift is discussed. The control over the chemical structure, electronic properties, and packing order of the SAMs provides a versatile platform to regulate the charge injection in organic electronic devices.     

Self-assembled monolayers of organosulfur derivative on gold nanoparticles as electrochemical sensor for determination of isoprenaline

In this paper, the use of molecular self-assembled monolayers of 5-(1,3-dithiolan-2-eyl)-3-methyl banzen-1,2-diol (DMD) on gold nanoparticles was described (DMD-AuNPs). The redox properties of modified electrode at various scan rates were investigated by cyclic voltammetry. A pair of well-defined quasi-reversible redox peaks of DMD were obtained at the modified electrode. Dramatically enhanced electrocatalytic activity was exemplified at the DMD-AuNPs, as an electrochemical sensor to investigate the electro-oxidation of isoprenaline (IP). With this modified electrode, the oxidation potential of the IP was shifted about 235 mV toward a less positive potential value than that of an unmodified electrode. The values of electron transfer coefficients (α = 0.5), catalytic rate constant (ks = 9.2 s^?1) and diffusion coefficient (D = 8.9 × 10^?5 cm² s^?1) were calculated for IP. The response of catalytic current with IP concentration showed a linear relation in the range from 0.5 to 800 µM with a detection limit of 0.21 µM. Finally, this modified electrode was used for the determination of IP in IP injections.     

Self-assembled monolayers of 2-mercaptobenzimidazole on gold: stripping voltammetric determination of Hg(II)

Monomolecular level modification of electrode surfaces through a self-assembly approach is, of late, gaining importance in view of its many functional applications in areas such as molecular electronics, molecular recognition, electron transfer studies and electroanalysis. Self-assembled monolayer (SAM) modification of a gold electrode with 2-mercaptobenzimidazole (MBI) has been achieved. On this modified electrode, anodic stripping voltammetric determination of mercury at ppm/sub-ppm level concentrations has been successfully attempted. Pre-concentration, prior to stripping, has been effected through a non-electrolytic process involving chemical interactions between MBI and Hg(II). The results are described and discussed with a plausible scheme.     

m-Terphenyl thiols: rigid and bulky molecules for the formation of bioactive self-assembled monolayers on gold

The m-terphenyl 4-mercaptomethyl-2,6-diphenylbenzoic acid (3), was prepared and shown to form omega-carboxyl terminated self-assembled monolayers (SAMs) on gold with high surface pKa(10.1 +/- 0.2) and low density favourable for the binding of biological macromolecules.     

New optical absorption band resulting from the organization of self-assembled monolayers of organic thiols on gold

Experimental evidences are presented supporting the existence of a new optical absorption band observed when monolayers of alkylthiol are self-assembled on gold substrate. This new absorption is centered at about 800 nm and has a very broad absorption peak. The intensity of the new band correlates with the density of molecules and the quality of the organization of the monolayer.     

Self-assembled functional organic monolayers on oxide-free copper

The preparation and characterization of self-assembled monolayers on copper with n-alkyl and functional thiols was investigated. Well-ordered monolayers were obtained, while the copper remained oxide-free. Direct attachment of N-succinimidyl mercaptoundecanoate (NHS-MUA) onto the copper surface allowed for the successful attachment of biomolecules, such as β-d-glucosamine, the tripeptide glutathione, and biotin. Notably, the copper surfaces remained oxide-free even after two reaction steps. All monolayers were characterized by static water contact angle measurements, X-ray photoelectron spectroscopy, and infrared reflection absorption spectroscopy. In addition, the biotinylated copper surfaces were employed in the immobilization of biomolecules such as streptavidin.     

Self-assembled monolayers of alkylsiloxanes on SrTiO3 substrates

The formation and structure of alkyltrichlorosilanes on several types of SrTiO₃ substrates have been studied. The silanes adsorb spontaneously from a hexadecane solution and form monolayers on all the substrates used. Characterization has been performed by atomic force microscopy, wettability, angle resolved X-ray photoelectron spectroscopy, reflection absorption infrared spectroscopy, and spectroscopic ellipsometry. It was found that highly ordered and densely packed monolayers were formed below a certain temperature.     

Self-assembled monolayers of alkylphosphonic acid on GaN substrates

In this paper we describe the formation and characterization of self-assembled monolayers of octadecylphosphonic acid (ODPA) on epitaxial (0001) GaN films on sapphire. By immersing the substrate in its toluene solution, ODPA strongly adsorbed onto UV/O 3-treated GaN to give a hydrophobic surface. Spectroscopic ellipsometry verified the formation of a well-packed monolayer of ODPA on the GaN substrate. In contrast, adsorption of other primarily substituted hydrocarbons (C n H 2 n+1 X; n = 16-18; X = -COOH, -NH 2, -SH, and -OH) offered less hydrophobic surfaces, reflecting their weaker interaction with the GaN substrate surfaces. A UV/O 3-treated N-polar GaN had a high affinity to the -COOH group in addition to ODPA, possibly reflecting the basic properties of the surface. These observations suggested that the molecular adsorption was primarily based on hydrogen bond interactions between the surface oxide layer on the GaN substrate and the polar functional groups of the molecules. The as-prepared ODPA monolayers were desorbed from the GaN substrates by soaking in an aqueous solution, particularly in a basic solution. However, ODPA monolayers heated at 160 degrees C exhibited suppressed desorption in acidic and neutral aqueous solution maybe due to covalent bond formation between ODPA and the surface. X-ray photoelectron spectroscopy provided insight into the effect of the UV/O 3 treatment on the surface composition of the GaN substrate and also the ODPA monolayer formation. These results demonstrate that the surface of a GaN substrate can be tailored with organic molecules having an alkylphosphonic acid moiety for future sensor and device applications.