Identification of glycerophospholipid fatty acid remodeling by using mass spectrometry imaging in bisphenol S induced mouse liver

Exposure to BPS induced glycerophospholipid fatty acid remodeling, which might be useful in toxicity evaluation for bisphenols-induced hepatic diseases.     

基于超高效液相色谱-四极杆-静电场轨道离子阱串联质谱的冷链贮藏过程中滩羊肉的脂质组学研究

该文建立了超高效液相色谱-四极杆-静电场轨道离子阱串联质谱(UHPLC-Q-Orbitrap MS/MS)结合脂质组学分析滩羊肉在冷链贮藏过程中脂质变化规律和脂质分子碎裂机理的方法。样品经异丙醇提取后,采用质谱全扫描模式和二级扫描模式对目标物质进行定性。共鉴定出48个变化显著性脂质,包括8个脂肪酰基肉碱、23个磷脂酰胆碱(PC)、3个溶血性磷脂酰胆碱(LPC)、13个磷脂酰乙醇胺(PE)、1个溶血性磷脂酰乙醇胺(LPE)。含量差异表现为部分PC、PE和脂肪酰基肉碱在前12 d短暂性升高,12 d后开始降低,而LPE和LPC在整个冷链贮藏期间表现为上升趋势。PC、PE和脂肪酰基肉碱短暂性的积累易导致大量的脂质氧化反应,进一步阐明最佳冷链时间为12 d。该方法适用于复杂基质中脂质分子的分离与定量,为肉及肉类产品在冷链贮藏过程中的脂质变化规律研究及质量控制提供了依据。     

Marine Algae Membrane Phospholipids Study by High Resolution 31P NMR

Abstract

Membrane phospholipids were extracted using a modified Folch, Lees and Sloane-Stanley method, from 21 different algae species covering three major divisions of the protista kingdom. In the modified method after chloroform/methanol (2:1 v/v) extraction and filtration, the solution was backwashed with K-EDTA, 0.6 M, instead of KCl, 1 M. Because algae samples are eavily loaded with cations that broaden NMR signals, the K-EDTA wash results in more highly resolved NMR signals. Following rotary evaporation, the crude algae lipid extract was dissolved in the chloroform-benzene(d6)/methanol-CsEDTA (2:l ml/ml) reagent and analyzed using a 500 MHz NMR spectrophotometer. Phospholipid chemical shifts were determined relative to standard phosphoric acid (85%), following the UIPAC convention. The internal reference used was phosphatidylcholine (PC, -0.84 δ) Division chlorophyta (8 sps.) yields phospholipid signals for phosphatidylglycerol (PG, 0.50), phosphatidic acid (PA, 0.25), cardiolipin (CL, 0.18), phosphatidylethanolamine (PE, 0.03), sphyngomyelin (SPH, -0.09), phosphatidylinositol (PI, -0.37) and PC; the lysoderivatives for lyso PG (LPG, 1.09) and lyso PC (LPC, -0.28), and one uncharacterized signal at 0.32. Phosphatidylserine (PS -0.05) and plasmalogens were not detected. Division rhodophyta (10 sps.) shows signal from PG, PA, CL, PE, SPH, PI, and PC; the lysoderivatives of lyso PA (LPA, 0.83), lyso PE (LPE, 0.43) and LPC; the plasmalogens PC plasmalogen (PC plas, -0.77), LPC plas (-0.20), and l-0-alkyl-2-acetyl-sn-glyceryl-3-phosphorylcholine (PAF-acether, -0.70); and an uncharacterized signal at -40 δ chemical shift. PS was not detected. Division Phaeophytas (3 sps.) showed signals for PG, PA, CL, PE, SPH, PI, and PC and lysoderivatives of LPG, LPA, LPE plas (0.53), LPE, LPC plas, and LPC. PS, PAF-acether and the uncharacterized signals at 0.32 δ and -0.40 δ were not detected.     

Profiling of lipids in Leishmania donovani using hydrophilic interaction chromatography in combination with Fourier transform mass spectrometry

There is evidence from our current research on resistance to stibigluconate and from some previous observations that lipid composition may be altered in resistant Leishmania donovani and in order to explore this we required a comprehensive lipidomics method. Phospholipids can be analysed by direct infusion into a mass spectrometer and such methods can work very well. However, chromatographic methods can also be very effective and are extensively used. They potentially avoid ion suppression effects, associate lipid classes with a retention time range and deliver good quantitative accuracy. In the current study three chromatography columns were compared for their ability to separate different classes of lipid. Butylsilane (C‐4), Zic‐HILIC and a silica gel column were compared. The best results were obtained with a silica gel column used in hydrophilic interaction chromatography (HILIC) mode with a mobile phase gradient consisting of (A) 20% isopropyl alcohol (IPA) in acetonitrile (v/v) and (B) 20% IPA in 0.02 M ammonium formate. Using these conditions separate peaks were obtained for triglycerides (TG), phosphoinositols (PI), inositol phosphoceramides (IPC), phosphatidylethanolamines (PE), phosphatidylserines (PS), phosphatidylcholines (PC), sphingosines (SG), lysophosphatidyethanolamines (LPE) and lysophosphatidylcholines (LPC). The methodology was applied to the analysis of lipid extracts from Leishmania donovani and by coupling the chromatography with an LTQ Orbitrap mass spectrometer. It was possible to detect 188 lipid species in the extracts with the following breakdown: PC 59, PE 38, TG 35, PI 20, CPI 13, LPC 11, LPE 2 and SG 10. The fatty acid composition of the more abundant lipids was characterised by MS² and MS³ experiments carried out by using an LCQ Deca low‐resolution ion trap instrument coupled with the silica gel column. The separation of lipids into well‐defined groups gives extra confidence in their identification and minimises the risk of ion suppression effects. High‐resolution mass spectrometry was necessary in order to be able to differentiate between acyl‐ and acyl‐alkyl‐lipids. Copyright © 2010 John Wiley & Sons, Ltd.     

Measurement of phospholipids by hydrophilic interaction liquid chromatography coupled to tandem mass spectrometry: the determination of choline containing compounds in foods

A hydrophilic interaction liquid chromatography-tandem mass spectrometry (HILIC LC-MS/MS) method using multiple scan modes was developed to separate and quantify 11 compounds and lipid classes including acetylcholine (AcCho), betaine (Bet), choline (Cho), glycerophosphocholine (GPC), lysophosphatidylcholine (LPC), lysophosphatidylethanolamine (LPE), phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidylinositol (PI), phosphocholine (PCho) and sphingomyelin (SM). This includes all of the major choline-containing compounds found in foods. The method offers advantages over other LC methods since HILIC chromatography is readily compatible with electrospray ionization and results in higher sensitivity and improved peak shapes. The LC-MS/MS method allows quantification of all choline-containing compounds in a single run. Tests of method suitability indicated linear ranges of approximately 0.25-25 μg/ml for PI and PE, 0.5-50 μg/ml for PC, 0.05-5 μg/ml for SM and LPC, 0.5-25 μg/ml for LPE, 0.02-5 μg/ml for Cho, and 0.08-8 μg/ml for Bet, respectively. Accuracies of 83-105% with precisions of 1.6-13.2% RSD were achieved for standards over a wide range of concentrations, demonstrating that this method will be suitable for food analysis. 8 polar lipid classes were found in a lipid extract of egg yolk and different species of the same class were differentiated based on their molecular weights and fragment ion information. PC and PE were found to be the most abundant lipid classes consisting of 71% and 18% of the total phospholipids in egg yolk.     

Phospholipid Profiles of Neoplastic Human Breast Tissues

Abstract

Membrane phospholipids from malignant, benign and non-involved human breast tissues were extracted by chloroform-methanol (2:l) and analyzed by ³¹P MR spectroscopy at 202.4 MHz. Fourteen phospholipids were identified as constituents of the profiles obtained among the 52 specimens of the three groups: PC, PC plas LPC, LPC plas, PE, PE plas, LPE, PS, SPH, PI, CL, PG, PA and one uncharacterized resonance at 0.13 6. The relative P-lipid profile mole percentages of phosphorus and indices representing sums and ratios of individual or grouped P-lipids were computed and analyzed by one-way analysis of variance and were compared as simple and complex statistical contrasts. The analysis permitted differentiation among the three groups with the most poignant simple contrast being the relative absence of PA in normal tissues, followed by the significant mean mole percentage differences in PC plas between noninvolved (3.09 ± 0.41) and malignant (4.49 ± 0.23) tissues and between these same tissues in the value, of the PC plas/PC index with mean values of 0.07 ± 0.01 and 0.10 ± 0.006, respectively. Significant complex contrasts were seen between the combined neoplastic tissues and noninvolved tissue in PE plas, LPC plas, PC plas and the (PA/Total Phosphatides-PA) index. Differences were also seen between malignant and non-malignant tissues in LPC, the LPC/PC, LPE/PE and PC plas/PC indices. Differentiation among histologically classified human breast tissues is possible with phospholipid profile analysis and metabolic insight.     

Lipidomics of the Edible Brown Alga Wakame (Undaria pinnatifida) by Liquid Chromatography Coupled to Electrospray Ionization and Tandem Mass Spectrometry

The lipidome of a brown seaweed commonly known as wakame (Undaria pinnatifida), which is grown and consumed around the world, including Western countries, as a healthy nutraceutical food or supplement, was here extensively examined. The study was focused on the characterization of phospholipids (PL) and glycolipids (GL) by liquid chromatography (LC), either hydrophilic interaction LC (HILIC) or reversed-phase LC (RPLC), coupled to electrospray ionization (ESI) and mass spectrometry (MS), operated both in high and in low-resolution mode. Through the acquisition of single (MS) and tandem (MS/MS) mass spectra more than 200 PL and GL of U. pinnatifida extracts were characterized in terms of lipid class, fatty acyl (FA) chain composition (length and number of unsaturations), and regiochemistry, namely 16 SQDG, 6 SQMG, 12 DGDG, 5 DGMG, 29 PG, 8 LPG, 19 PI, 14 PA, 19 PE, 8 PE, 38 PC, and 27 LPC. The FA (C16:0) was the most abundant saturated acyl chain, whereas the monounsaturated C18:1 and the polyunsaturated C18:2 and C20:4 chains were the prevailing ones. Odd-numbered acyl chains, iJ., C15:0, C17:0, C19:0, and C19:1, were also recognized. While SQDG exhibited the longest and most unsaturated acyl chains, C18:1, C18:2, and C18:3, in the sn-1 position of glycerol, they were preferentially located in the sn-2 position in the case of PL. The developed analytical approach might pave the way to extend lipidomic investigations also for other edible marine algae, thus emphasizing their potential role as a source of bioactive lipids.     

Phospholipids Analysis by 31P NMR

Abstract

Cell membrane phospholipids can be identified and quantitated using ³¹P NMR spectroscopy in conjunction with an analytical reagent composed of chloroform-benzene(d6)/methanol-CsEDTA 2:l ml/ml. 3 ml of this reagent dissolves between 0.01–100 mg crude tissue lipids obtained by the Folch procedure. When the source phospholipids are strongly contaminated with cations, it is necessary to modify the extraction method, backwashing with K-EDTA, 0.6 M, pH 6, instead of KC1. Also if source tissues must be stored for long periods of time, acetone desication is recommended. Using a 500 MHz ³¹PNMR spectrophotometer (magnetic field ?11.75 T), the extracted phospholipids yield narrow Lorenzian signals (1.8–3.2 Hz at half-height), with these widths at half-height corresponding to their 1/πT₂ values. Chemical shifts (δ) at 24 °C, following the IUPAC shift convention and relative to 85% phosphoric acid, were determined as follows:CAEP,21.09;LPG,l,O9;LPA,0.83;LPE plas,0.53;PG,0.50;LPE,0.43; PA,0.25;CL,0.18;LPI,0.10;PE plas,0.07;PE,0.03;PS,?0.O5;SPH,?0.O9; DiMePE,?b.18;LPC plas,?0.20;LPC,?0.28;PI,?0.37; PAF, ?0.70;PC plas,?0.77; PC, ?0.84. This reagent permits assays of high precision and accuracy that use little spectrometer time and that are suitable for automated procedures.     

Quantification of plasma phospholipids by ultra performance liquid chromatography tandem mass spectrometry

We describe a fast and robust ultra performance liquid chromatography tandem mass spectrometry method for the quantification of phospholipid (PL) species in EDTA-plasma samples. We quantified total phosphatidylcholine (PC), phosphatidylethanolamine (PE), lysophosphatidylcholine (LPC), and sphingomyelin (SM) and several species within these classes using one or two external calibrators and one internal standard for each class. Inter-assay coefficients of variation were <10% for the most abundant species and <20% for all quantified PC, LPC, and SM species and the three most abundant PE species. Coefficients of linear regression were R ² > 0.98. Mean recoveries were between 83% and 123%. The limits of detection were 0.37 μmol/L for PC, 4.02 μmol/L for LPC, 3.75 μmol/L for PE, and 0.86 μmol/L for SM. Quantification was linear over the physiological ranges for PE, LPC, and SM and up to 500 μmol/L for PC. The concentrations of PLs in the plasma of healthy donors yielded results that were comparable with those of previous works.     

Enzymatic hydrolysis of anchovy oil: Production of glycerides enriched in polyunsaturated fatty acids

In an attempt to produce the polyunsaturated fatty acid (PUFA)enriched glycerides, commercially available Turkish anchovy oil (PUFA content of 27%), was hydrolyzed with 1,3-specificRhizomucor miehei lipase. After the hydrolysis, the triglyceride (TG), diglyceride (DG), monoglyceride (MG), and free fatty acid (FFA) composition of the reaction mixture was determined, and fatty acid components of these fractions were analyzed.R. miehei lipase released PUFA extremely slowly, resulting in their accumulation in the TG and DG fractions, especially in TG. The PUFA content in the glyceride mixture (including TG, DG, and MG) increased as hydrolysis progressed. The effects of operational parameters (pH, temperature, time, and enzyme concentration) on the extent of hydrolysis were investigated. Based on these results, optimal reaction conditions were established. At optimal conditions (pH 4.0, 35°C, 3 h, and enzyme concentration of 500 U/g oil), the level of PUFA in the glyceride mixture was raised to 40%. The individual TG and DG fractions contained 45 and 30% PUFA, respectively. Less than 2% of the total PUFA was lost in the FFA fraction.     

High performance liquid chromatography-tandem mass spectrometry of phospholipid molecular species in eggs from hens fed diets enriched in seal blubber oil

The total lipid fraction of eggs from hens fed diets enriched in seal blubber oil (1.25-5.0% SBO) was directly analysed with normal-phase high performance liquid chromatography coupled on-line with electrospray ionization ion-trap tandem mass spectrometry (HPLC-ESI-MS-MS) for the identification of the molecular species of phospholipids (PLs). The species of phosphatidylethanolamine (PE) and phosphatidylinositol (PI) were all detected as the [M-H](-) ions. The phosphatidylcholine (PC), sphingomyelin (Sph) and lysophosphatidylcholine (LPC) classes, were detected as formate adducts [M+HCOO](-). Tandem MS of PE and PI showed the loss of the carboxylate anions, and, for PI, also the loss of water and inositol. Product ion spectrum of PC, LPC and Sph contained only the [M-CH(3)](-) ion fragment. Feeding different levels of SBO for 5 weeks resulted in a significant increase of PE, PC and PI molecular species carrying eicosapentaenoic acid (C(20:5 omega3), EPA), docosapentaenoic acid (C(22:5 omega3), DPA) and docosahexaenoic acid (C(22:6 omega3), DHA), but not Sph nor LPC. The highest increase of the omega3/omega6 ratio occurred for PE and PC. On the contrary, PI was less affected by the increase of SBO in the diet.     

Separation of phospholipid classes by hydrophilic interaction chromatography detected by electrospray ionization mass spectrometry

A new isocratic separation method was developed for separation of phospholipid (PL) classes based on a silica hydrophilic interaction liquid chromatography (HILIC) column with electrospray ionization (ESI) mass spectrometric detection. Although HILIC is typically used for polar compounds, also amphiphilic molecules like phospholipids can be separated very well. Compared to normal-phase (NP) chromatography, which is usually used for PL class separation, HILIC has the advantage to use on-line ESI-MS detection because its eluents are ESI compatible. Furthermore, this HILIC method is isocratic and hence less time consuming than most (gradient) NP HPLC methods. A chromatographic baseline separation of a standard mixture containing phosphatidylglycerol (PG), phosphatidylethanolamine (PE), phosphatidylcholine (PC), sphingomyelin (SM) and lysophosphatidylcholine (LPC) was achieved within a total run time of 17 min using a mobile phase consisting of acetonitrile, methanol and ammonium acetate 10 mM. The new method was subsequently tested on phospholipid fractions of a body fluid (human blood plasma) and a tissue extract (swine brain) whereby it achieved nearly the same baseline separation of the PL classes. The detected classes in both cases were PE, PC, SM and LPC.     

Thin Layer Chromatography of Phospholipid Composition in Mouse and Rabbit Spermatozoa

Abstract

The time course of the loss of different components of the phospholipids of rabbit and mouse epididymal spermatozoa during spontaneous lipid peroxidation was determined, using thin layer chromatography with a specific situ hydrolysis method to differentiate the acyl and alkenyl (plasmalogen) moieties. The components followed were phosphatidylethanolamine (PE), phosphatidylcholine (PC), the PE and PC phasmalogens, sphingomyelin (SP), cardiolipin (CL), and phosphatidyl-glycerol (PG). In both mouse and rabbit sperm, the PE component was found to be more than 90% diplasmalogen: 1,2-di(0-1′-alkenyl) glycerophosphoethanolamine. This component was lost rapidly during peroxidation. All PE has disappeared from rabbit sperm after 4 h aerobic incubation, at which point the other phospholipids had been little affected. In both mouse and rabbit sperm, the PC component was found to be 50% monoplasmalogen. The decrease in PC plasmalogen of rabbit sperm amounted to 74% after 20 h, compared to 42% loss of total PC. Similar observations were made with mouse sperm, except that rates of loss of all components were approximately twice those in rabbit. Distribution of the phospholipid components between sperm heads and tails was also determined: PE diplasmalogen was almost entirely found in the tail fraction, in both mouse and rabbit sperm. This mode of analysis allows the differentiation of sensitivities towards spontaneous peroxidation of the different types of phospholipid present in sperm membranes.     

Simultaneous Quantitative Analysis for Phospholipids in Human HDL and LDL Using Two Internal Standards by Liquid Chromatography/Mass Spectrometry

Abstract

A liquid chromatography/mass spectrometry method using two internal standards was developed for the simultaneous quantitative determination of phosphatidylglycerol (PG), phosphatidylinositol (PI), phosphatidylethanolamine (PE), phosphatidylcholine (PC), sphingomyelin (SM), and lysophosphatidylcholine (LPC) in human high‐density lipoprotein (HDL) and low‐density lipoprotein (LDL). We evaluated this method by examining precision, accuracy, and recovery of phospholipid concentrations in several matrixes. We obtained the time course of phospholipid content in human HDL and LDL treated with sPLA₂‐X and quantitatively observed the decrease of PC, PI, PE, and the increase of LPC. This method should be useful for examination of simultaneous change of endogenous phospholipids in various enzymatic assays.     

Monoglyceride and Diglyceride Production Through Lipase-Catalyzed Glycerolysis and Molecular Distillation

Distilled glycerides are obtained through distillation of the system mono-diglycerides which is produced from the esterification reaction between a triglyceride with glycerol. In this work, monoglycerides (MG) and diglycerides (DG) are produced through lipase-catalyzed glycerolysis of soybean oil using Candida antarctica B in a solvent-free system. To separate the products of the reaction in order to obtain essentially MG and an oil of DG, it is necessary to use a suitable process in order to preserve the stability of the components and to keep the products free of inappropriate solvents. So, after 24 h of enzymatic reaction, the mixture of acylglycerols and fatty acids was distilled into a centrifugal molecular distiller, since it provides a free solvent and lower temperature environment to increase the desired product concentration. Starting from a material with 25.06% of triglycerides (TG), 46.63% of DG, 21.72% of MG, 5.38% of free fatty acids (FFA), and 1.21% of glycerol, the MG purity in the distillate stream was 80% at evaporator temperature (T _E) equal to 250 °C and feed flow rate (Q) equal to 10.0 mL/min. At these conditions, the MG recovery was 35%. The material collected in the residue stream presented DG-enriched oil with TG unhydrolyzed, residual MG, and low acidity (29.83% of TG, 53.20% of DG, 15.64% of MG, and 1.33% of FFA), which is suitable to replace TG oil in the human diet.     

Tandem Mass Spectrometry Imaging Enables High Definition for Mapping Lipids in Tissues

Mass spectrometry imaging (MSI) of lipids in biological tissues is useful for correlating molecular distribution with pathological results, which could provide useful information for both biological research and disease diagnosis. It is well understood that the lipidome could not be clearly deciphered without tandem mass spectrometry analysis, but this is challenging to achieve in MSI due to the limitation in sample amount at each image spot. Here we develop a multiplexed MS² imaging (MS²I) method that can provide MS² images for 10 lipid species or more for each sampling spot, providing spatial structural lipidomic information. Coupling with on-tissue photochemical derivatization, imaging of 20 phospholipid C=C location isomers is also realized, showing enhanced molecular images with high definition in structure for mouse brain and human liver cancer tissue sections. Spatially mapped t-distributed stochastic neighbor embedding has also been adopted to visualize the tumor margin with enhancement by structural lipidomic information.     

Lipidomic profiling of plasma in patients with chronic hepatitis C infection

Chronic hepatitis C virus (HCV) infection is a global health issue. Although its progression is reported to be closely associated with lipids, the way in which the plasma lipidome changes during the development of chronic HCV infection in humans is currently unknown. Using an improved quantitative high-throughput lipidomic platform, we profiled 284 lipids in human plasma samples obtained from healthy controls (n?=?11) and patients with chronic HCV infection (n?=?113). The intrahepatic inflammation grade (IG) of liver tissue was determined by biopsy. Two types of mass spectrometers were integrated into a single lipidomic platform with a wide dynamic range. Compared with previous methods, the performance of this method was significantly improved in terms of both the number of target sphingolipids identified and the specificity of the high-resolution mass spectrometer. As a result, 44 sphingolipids, one diacylglycerol, 43 triglycerides, 24 glycerophosphocholines, and 5 glycerophospho-ethanolamines were successfully identified and quantified. The lipid profiles of individuals with chronic HCV infection were significantly different from those of healthy individuals. Several lipids showed significant differences between mild and severe intrahepatic inflammation grades, indicating that they could be utilized as novel noninvasive indicators of intrahepatic IG. Using multivariate analysis, healthy controls could be discriminated from HCV patients based on their plasma lipidome; however, patients with different IGs were not well discriminated. Based on these results, we speculate that variations in lipid composition arise as a result of HCV infection, and are caused by HCV-related digestive system disorders rather than progression of the disease.

Lipidomic study and diagnosis of hepatocellular carcinoma tumor with rapid evaporative ionization mass spectrometry

Liver cancer is generally considered the leading cause of cancer deaths worldwide, and hepatocellular carcinoma (HCC) contributes to more than 90% of liver cancers. The altered lipid metabolism for rapid cancer cell growth and tumor formation has been frequently proven. In this study, an ambient ionization mass spectrometry technique, rapid evaporative ionization mass spectrometry (REIMS) using a monopolar electric knife, called iKnife, was systematically optimized and employed for ex vivo analysis of 12 human HCC tumor tissue specimens together with the paired paracancerous tissue (PT) and noncancerous liver tissue (NCT) specimens. Nine free fatty acids and 34 phospholipids were tentatively identified according to their extract masses and/or tandem mass spectra. With the help of statistical methods, 7 free fatty acids and 10 phospholipids were distributed differently in 3 types of liver tissue specimens (95% confidence interval). The box plots showed these characterized lipid metabolites varied in PT, HCC, and NCT. Compared with PT and NCT, the upregulations of four common fatty acids FA 18:0, FA 20:4, FA 16:0, and FA 18:1, together with phospholipids PC 36:1, PE 38:3, PE (18:0/20:4), PA (O-36:1), PC (32:1), PC 32:0, PE 34:0, and PC (16:0/18:1), were found in HCC specimens. The sensitivity and specificity of the established statistic model for real-time HCC tumor diagnosis were 100% and 90.5%, respectively. This study demonstrated that the described REIMS technique is a potential method for rapid lipidomic analysis and characterization of HCC tumor tissue.     

Analysis of aminophospholipid molecular species by methyl-beta-cyclodextrin modified micellar electrokinetic capillary chromatography with laser-induced fluorescence detection

Micellar electrokinetic capillary chromatography (MEKC) with laser-induced fluorescence detection is used for the analysis of three classes of aminophospholipids: phosphatidylethanolamine (PE), phosphatidylserine (PS), and lysophosphatidylethanolamine (LPE) molecular species. 3-(2-Furoyl) quinoline-2-carboxaldehyde (FQ), a fluorogenic dye, was employed for labeling of these phospholipids. The FQ-labeled lipid species were then separated by sodium deoxycholate MEKC modified with methyl-beta-cyclodextrin. Baseline resolution of each class of phospholipids was achieved within 7 min. The migration time in each class increased with the carbon number of their side aliphatic chain. Separation efficiencies of approximately 3x10(5) plates were observed for most of these species. Concentration detection limits (3 sigma) were from 10(-9) to 10(-10) M for PE and LPE species and from 10(-8) to 10(-9) M for PS species. The relative standard deviations for migration time and peak area were less than 0.9% and 4.5%, respectively, for seven PE species. This method was applied to the separation of PE isolated from HT29 human colon cancer cells and roughly 30 PE species were resolved.     

A comparative lipidomics platform for chemotaxonomic analysis of Mycobacterium tuberculosis

The lipidic envelope of Mycobacterium tuberculosis promotes virulence in many ways, so we developed a lipidomics platform for a broad survey of cell walls. Here we report two new databases (MycoMass, MycoMap), 30 lipid fine maps, and mass spectrometry datasets that comprise a static lipidome. Further, by rapidly regenerating lipidomic datasets during biological processes, comparative lipidomics provides statistically valid, organism-wide comparisons that broadly assess lipid changes during infection or among clinical strains of mycobacteria. Using stringent data filters, we tracked more than 5,000 molecular features in parallel with few or no false-positive molecular discoveries. The low error rates allowed chemotaxonomic analyses of mycobacteria, which describe the extent of chemical change in each strain and identified particular strain-specific molecules for use as biomarkers.