Influence of spectral and angular sensitivity on the readout of biological dosimeters

Biological systems used as biological dosimeters can possess different angular sensitivities from the detectors usually used in physical devices. A simple experimental setup has been developed and used to measure the angular sensitivity of uracil thin-layer biological dosimeters. Results of angular sensitivity measurements for uracil thin-layer dosimeters are presented using a Xe arc lamp as the UV source. According to the experiments described here, uracil thin-layer dosimeters show a cosine-type angular dependence. In several indoor experiments broadband UV meters are used to control the applied dose rate from a given artificial UV source. The experimental setup has been designed and used to verify experimentally the importance of spectral and angular sensitivity differences of biological and physical UV meters applied in biological experiments. Model calculations for two different irradiation systems, using different geometrical arrangements of artificial UV sources, are also presented. For these arrangements relative dose rates that could be measured with dosimeters of arbitrary spectral, but different angular sensitivity have been calculated.     

The role of the spectral sensitivity curve in the selection of relevant biological dosimeters for solar UV monitoring

To estimate the risk of enhanced UV-B radiation due to stratospheric ozone depletion, phage T7 and uracil thin-layer biological dosimeters have been developed, which weight the UV irradiance according to induced DNA damage. To study the molecular basis of the biological effects observed after UV irradiation, the spectral sensitivity curves of the two dosimeters and induction of the two major DNA photoproducts, cyclobutane pyrimidine dimers (CPDs) and 6-4 photoproducts ((6-4)PDs), in phage T7 have been determined for polychromatic UV sources. CPDs and (6-4)PDs are determined by lesion-specific monoclonal antibodies in an immunodotblot assay. Phage T7 and uracil biological dosimeters together with a Robertson-Berger (RB) meter have been used for monitoring environmental radiation from the polar region to the equator. The biologically effective dose (BED) established with the three different dosimeters increases according to the changes in the solar angle and ozone column, but the degree of the change differs significantly. The results can be explained based on the different spectral sensitivities of the dosimeters. A possible method for determining the trend of the increase in the biological risk due to ozone depletion is suggested.     

Use of Uracil Thin Layer for Measuring Biologically Effective UV Dose

Abstract— Dimerization of uracil monomers in a polycrystalline state by UV radiation changes the absorption characteristics of a thin layer of the material. The change in optical density, measured by spectrophotometry in the250–400 nm range, as a function of the exposure time is evaluated in terms of the biologically effective UV dose. A statistical evaluation of a great number of uracil dosimeters irradiated with a TL01 lamp from Philips establishes the possibility of evaluating the biologically effective UV dose using a uracil dosimeter. Nonlinear regression procedures were introduced to correct the absorption spectra for contributions due to light scattering and to determine the optical density values required to calculate the UV dose expressed in H^Uunits. Comparison of cumulative daily doses and long-term monitoring measured by the uracil thin-layer dosimeter and a phage T7 dosimeter are given, which allow the determination of conversion factors between various biological dosimeters under different irradiation conditions.     

Biological UV dosimeters in the assessment of the biological hazard from environmental radiation

To determine the impact of environmental UV radiation, biological dosimeters that weight directly the incident UV components of sunlight have been developed, improved and evaluated in the frame of the BIODOS project. Four DNA-based biological dosimeters ((i) phage T7, (ii) uracil thin layer, (iii) spore dosimeter and (iv) DLR-biofilm) have been assessed from the viewpoint of their biological relevance, spectral response and quantification of their biological effectiveness. The biological dosimeters have been validated by comparing their readings with weighted spectroradiometer data, by comparison with other biological doses, as well as with the determined amounts of DNA UV photoproducts. The data presented here demonstrate that the biological dosimeters are potentially reliable field dosimeters for measuring the integrated biologically effective irradiance for DNA damage.     

Low temperature 13C NMR magnetic resonance in solids 4. Cyclopropane,bicyclo[1.1.0]butane and [1.1.1] propellane

The solid state ¹³C NMR spectra of bicyclo[1.1.0]butane and [1.1.1]propellane have been measured at low temperature. The orientation of the principal axes of the chemical shielding tensor have been determined with ab initio calculations based on the IGLO (Individual Gauge for Localized Orbitals) method when they are not determined by symmetry. Excellent agreement is obtained between the calculated and experimental principal values of the shielding tensor when basis sets containing polarization functions are used. In most cases the agreement is such that the calculated values are within the experimental error.Part 3 of this series: Ref. [7]     

Identification of ionic and tautomeric species of uracil by second derivative UV absorption spectroscopy.

The individual UV absorption spectra of ionic and tautomeric species of uracil and eight derivatives have been determined by second derivative spectroscopy. Second derivative bands have been ascribed to different species by taking into account the proportion of each molecular species at each pH value and the tautomer fixed for derivatives. Theoretical results in the literature are in good agreement with the observed λ_Min(D^2nd) positions of both N(1)- and N(3)- uracil monoanion and dianion. Neutral uracil species (diketo form) presents six second derivative bands (two in normal spectra). For the three higher electronic transition energies, the discrepancy between calculated and experimental values does not exceed 0.05 e V. Literature assignment from normal spectra for the N(3)- anion are ππ* transitions but our results show that n π* are possible too.     

Phage T7 in biological UV dose measurement.

An experimental method complete with theoretical considerations is presented for the measurement of different biological UV doses. The method is based on the high sensitivity of phage T7 activity to UV light. A precisely determined T7 inactivation action spectrum is presented over a wide optical range (240-514 nm). Using the T7 spectral sensitivity in relation to the minimal erythema dose (MED) and the effective spectral irradiance from solar radiation for the MED, an example is given to determine the MED value based on the measurement of T7 inactivation for a given case. The advantages and applicability of the method are discussed.     

Analysis of Pseudouridine by Fluorescence Spectrometry

Abstract

Fluorescence spectral properties of pseudouridine, an important biological indicator, have been measured for the first time in this study. The fluorescence quantum yield is maximal in aqueous solution with pH values above 9 with spectral properties characteristic of 5 alkyl substituted uracil derivatives. Chromatographic analysis shows the fluorescence is associated only with the pseudouridine peak. The concentration dependence of fluorescence is linear from 4 to 45 micromolar at pH 11.5. The excitation maximum is about 295 nm and the emission is broad with a maximum at about 390 nm. Addition of pseudouridine to urine extracts gives a linear increase in fluorescence with increasing pseudouridine concentration.     

Formation of doubly charged atomic ions in the inductively coupled plasma

Experimental and theoretical studies dealing with the formation efficiency of M²⁺ ions, which reduce the analytical signal of M⁺ ions and cause spectral interferences in the inductively coupled plasma mass spectrometry (ICP-MS), have been discussed. Inconsistencies in the results have been pointed out and goals have been formulated for further investigations necessary to correct those spectral interferences. The range of elements that form most readily M²⁺ ions has been determined. Partition functions and reduced thermodynamic potentials of atoms, M⁺ and M²⁺ ions of elements with the lowest second ionization potentials have been calculated. The Saha equation and the thermodynamic simulation were used to calculate the formation efficiency of M⁺ and M²⁺ ions for a selected group of elements in ICP. The results have been compared with experimental and theoretical data available in the literature. The accuracy of the calculations and their applicability to the prediction of the formation efficiency of M⁺ and M²⁺ ions in ICP and other spectral sources has been demonstrated. The main factors responsible for the disagreement between experimental and theoretical values of the formation efficiency of M⁺ and M²⁺ ions have been determined.     

Absorption UV spectroscopy and electronic structure of ionic and tautomeric forms of hydroxy and methoxy derivatives of cytosine and adenine,and of some 5-substituted analogs of pyrimidines

The individual absorption spectra of various ionic and tautomeric species of some derivatives of nucleic-acid components have been determined by computer handling of the summary spectra of these compounds measured at different pH values. These individual spectra have been decomposed into separate bands represented by log-normal curves and corresponding to different electronic transitions. Using the parameter system calculated earlier for the molecules of the vitamin B₆ family, the calculation of the electronic spectra and electronic structure of various ionic and tautomeric species of the molecules studied have been carried out in the π-electron approximation. These properties have also been calculated by the all-valence electronic method CNDOS . The calculated results correlate well with both approximations and with our experimental spectral data. The localization of the molecular electronic excitation studied on the transition to the S₁ and T₁ states is considered in connection with the reactivity in these states.     

An experimental and theoretical study of excited-state dipole moments of some flavones using an efficient solvatochromic method based on the solvent polarity parameter, E(N)(T)

The electronic absorption and fluorescence spectra of some biologically active natural flavones have been recorded at room temperature (298 K) in solvents of different polarities. The effects of the solvents upon the spectral properties are discussed. Difference in fluorescence intensity of flavones has been explained on the basis of intersystem crossing and degree of non-planarity calculated theoretically using Austin Model 1 (AM1) method. Excited-state dipole moments have been determined using the solvatochromic method based on the microscopic solvent polarity parameter, E(N)(T). A reasonable agreement has been observed between experimental and AM1 calculated dipole moment changes. Our results are found to be quite reliable in view of the fact that the correlation of the solvatochromic Stokes shifts with microscopic solvent polarity parameter, E(N)(T) is superior to that obtained using bulk solvent polarity functions for all the systems studied here.     

Probing the Watson-Crick, wobble, and sugar-edge hydrogen bond sites of uracil and thymine

The nucleobases uracil (U) and thymine (T) offer three hydrogen-bonding sites for double H-bond formation via neighboring N-H and C=O groups, giving rise to the Watson-Crick, wobble and sugar-edge hydrogen bond isomers. We probe the hydrogen bond properties of all three sites by forming hydrogen bonded dimers of U, 1-methyluracil (1MU), 3-methyluracil (3MU), and T with 2-pyridone (2PY). The mass- and isomer-specific S1 <-- S0 vibronic spectra of 2PY.U, 2PY.3MU, 2PY.1MU, and 2PY.T were measured using UV laser resonant two-photon ionization (R2PI). The spectra of the Watson-Crick and wobble isomers of 2PY.1MU were separated using UV-UV spectral hole-burning. We identify the different isomers by combining three different diagnostic tools: (1) Selective methylation of the uracil N3-H group, which allows formation of the sugar-edge isomer only, and methylation of the N1-H group, which leads to formation of the Watson-Crick and wobble isomers. (2) The experimental S1 <-- S0 origins exhibit large spectral blue shifts relative to the 2PY monomer. Ab initio CIS calculations of the spectral shifts of the different hydrogen-bonded dimers show a linear correlation with experiment. This correlation allows us to identify the R2PI spectra of the weakly populated Watson-Crick and wobble isomers of both 2PY.U and 2PY.T. (3) PW91 density functional calculation of the ground-state binding and dissociation energies De and D0 are in agreement with the assignment of the dominant hydrogen bond isomers of 2PY.U, 2PY.3MU and 2PY.T as the sugar-edge form. For 2PY.U, 2PY.T and 2PY.1MU the measured wobble:Watson-Crick:sugar-edge isomer ratios are in good agreement with the calculated ratios, based on the ab initio dissociation energies and gas-phase statistical mechanics. The Watson-Crick and wobble isomers are thereby determined to be several kcal/mol less strongly bound than the sugar-edge isomers. The 36 observed intermolecular frequencies of the nine different H-bonded isomers give detailed insight into the intermolecular force field.     

Biological UV dosimeters in quality control of tanning tubes

Although according to the International Radiological Protection Association-International Non-Ionizing Radiation Committee recommendation (1991) the use of sunbeds for cosmetic purposes is not recommended, tanning devices are used widely. Ten different types of commercially available sunbed tubes have been studied using a uracil biological UV dosimeter, and three of them were analyzed in detail. Dimerization effectiveness of the tubes was measured directly, whereas efficiency of erythema induction was calculated weighting the emission spectra by the Commission Internationale de l'Eclairage erythema action spectrum. The data obtained demonstrate that quality control of sunbed tubes has to include not only the determination of the UV doses administered but also the assessment of the health risk due to the UVB and UVA components of the lamp. A method of quality control using the uracil biological dosimeter was elaborated, and the estimation of the "acceptable" exposure time was checked/controlled on 15 volunteers by assessing individually the erythema induction threshold. A correct classification of the sunbed tubes is proposed by characterizing the erythema induction versus DNA-damaging effectiveness of tubes.     

Molecular structure, spectroscopic studies and first-order molecular hyperpolarizabilities of ferulic acid by density functional study

Quantum chemical calculations of energies, geometrical structure and vibrational wavenumbers of ferulic acid (FA) (4-hydroxy-3-methoxycinnamic acid) were carried out by using density functional (DFT/B3LYP/BLYP) method with 6-31G(d,p) as basis set. The optimized geometrical parameters obtained by DFT calculations are in good agreement with single crystal XRD data. The vibrational spectral data obtained from solid phase FT-IR and FT-Raman spectra are assigned based on the results of the theoretical calculations. The observed spectra are found to be in good agreement with calculated values. The electric dipole moment (μ) and the first hyperpolarizability (β) values of the investigated molecule have been computed using ab initio quantum mechanical calculations. The calculation results also show that the FA molecule might have microscopic nonlinear optical (NLO) behavior with non-zero values. A detailed interpretation of the infrared and Raman spectra of FA was also reported. The energy and oscillator strength calculated by time-dependent density functional theory (TD-DFT) results complements with the experimental findings. The calculated HOMO and LUMO energies shows that charge transfer occur within the molecule. The theoretical FT-IR and FT-Raman spectra for the title molecule have been constructed.     

Synthesis,structure, and spectral fluorescence properties of 1,4-di(5-phenyl-2-oxazolyl)benzene heteroanalogs

Novel organic luminophors belonging to the oxazole and oxadiazole classes of compounds have been synthesized, namely, thiophene and furan analogs of 1,4-di(5-phenyl-2-oxazolyl)benzene. The optical properties of these compunds have been studied both theoretically and experimentally. Their IR spectra have been measured and their UV absorption, fluorescence, and excitation spectra have been analyzed. Details of their electronic structure and their principal spectral fluorescence parameters have been calculated using the PPP method. Possible methods or pathways for improving the spectral fluorescence parameters of organic luminophors in these classes of compounds in the visible region of the spectrum have also been analyzed.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 10, pp. 1414–1419, October, 1989.     

Spectroscopic studies of interaction of Safranine T with nonionic micelles and mixed micelles

The visible spectra of Safranine T (ST) in micellar solution of Brij 58, Tween 20 and Tween 40 and mixed micellar solution of Brij 58/Tween 20 and Brij 58/Tween 40 indicate formation of 1:1 charge transfer (CT) complex between acceptor ST and donor nonionic micelles and mixed micelles. The experimental CT transition energies are well correlated (through Mulliken's equation) with the vertical ionization potential of the donors. The solvent parameters, i.e. the intramolecular charge transfer energy ET(30) have been determined from the Stokes spectral shift. Variations of ionization potential and micropolarity in the mixed micellar region have been investigated as a function of surfactant composition and the obtained results in mixed micellar medium has been compared to the normal micelles. The critical micelle concentration (CMC) values determined at various surfactant compositions are lower than the ideal values indicating a synergistic interaction. The interaction parameter (beta) and micellar stability has been calculated using regular solution theory.     

A COMPARISON OF DOSIMETERS USED FOR SOLAR ULTRAVIOLET RADIOMETRY

Radiometric measurements of terrestrial sunlight using three different types of broad-band dosimeters were compared with equivalent integrated quantities obtained from simultaneous spectroradiometric measurements. Measurements were made at Durham, UK (55 degrees N) during one day in mid-summer and one day in the autumn. By this means it was possible to encompass a wide range of ultraviolet irradiances. There was close agreement between UV-A irradiance measured using a broad-band radiometer and determined spectroradiometrically over the whole range of irradiances when allowance was made for the spectral sensitivity of the UV-A radiometer. The agreement between erythemally-effective irradiance determined spectroradiometrically and the response of a Robertson-Berger meter showed some non-linearity due to the mismatch between the erythema action spectrum and spectral response of the sensor. There was a similar disparity in agreement between erythemally-effective dose determined spectroradiometrically and the response of polysulphone film for similar reasons. Nevertheless it is concluded that if these latter two dosimeters are calibrated using sunlight, or a solar simulator, as the source, they can yield data which are sufficiently reliable for many applications.     

Researches by the method of low-temperature adiabatic calorimetry and quantum chemical computation of vibrational states

The temperature dependence of heat capacity of a natural zinc silicate, hemimorphite Zn₄Si₂O₇(OH)₂·H₂O, over the temperature range 5–320 K has been investigated by the method of low-temperature adiabatic calorimetry. On the basis of the experimental data on heat capacity over the whole temperature interval, its thermodynamic functions C _p (T), S(T) and H(T) ? H(0) have been calculated. The existence of a phase transition in the area of 90–105 K determined on the basis of vibrational spectra has been confirmed, and changes of entropy ΔS _tr. and enthalpy ΔH _tr. of the phase transition have been calculated. Hemimorphite heat capacity has also been determined by the calculation methods according to the valence force field model in LADY program. The values of force constants of valence bonds and angles have been calculated by semi-empirical method PM5. The calculated IR and Raman spectra concordant with the experimental spectra have been obtained. The heat capacity values calculated according to the found vibrational states satisfactorily agree with those experimentally obtained with an accuracy of ±1.7% in the area of 120–200 K, and not more than ±0.8% for the interval of 200–300 K. This fact testifies that the calculation of thermodynamic characteristics is correct.     

尿嘧啶和5-溴尿嘧啶的低温热容

采用综合物性测量系统(PPMS)的热容测量模块在1.9-300 K温度区间内对两种药物中间体(尿嘧啶和5-溴尿嘧啶)的低温热容进行了测量与研究. 结果表明, 在测量温区内两种化合物的低温热容随温度的上升而逐步增加, 无任何热异常现象产生; 在相同温度下, 5-溴尿嘧啶的热容数值始终高于尿嘧啶. 利用低温热容理论模型对热容数据进行了拟合, 并计算得到了0-300 K温区的摩尔熵变、焓变等热力学函数. 此外, 通过热容拟合数据计算得到的尿嘧啶和5-溴尿嘧啶在298.15 K的标准摩尔规定熵分别为(132.48±1.32)和(165.39±1.65) J·K^-1·mol^-1.