Coenzyme B12 model studies: Equilibrium constants for the pH-dependent axial ligation of benzyl(aquo)cobaloxime by various N- and S-donor ligands

Equilibria of the axial ligation of benzyl(aquo)cobaloximes by imidazole, 1-methyl imidazole, histidine, histamine, glycine, ethyl glycine ester, thiourea and urea have been spectrophotometrically measured in aqueous solutions of ionic strength 1.0M (KCl) at 25°C as a function of pH. The equilibrium constants are in the order CN⁻> 1-methyl imidazole > imidazole > histidine > histamine>glycine>ethyl glycine ester > thiourea > urea. The order of stability of benzyl(ligand)cobaloxime is explained based on the basicity of the ligand, Co(III) →>L dπ- pπback bonding and soft-soft and soft-hard interaction. Imidazole, substituted imidazoles, histidine and histamine form more stable complexes than glycine, ethyl glycine ester in contrast to the basicity of the ligands. Benzyl(ligand)cobaloximes were isolated and characterized by elemental analysis, IR and¹H NMR spectra.     

Equilibria and kinetics for p H-dependent axial ligation of alkyl(aquo) cobaloximes with aromatic and aliphatic N-donor ligands

Equilibria and kinetics of the reaction of bromomethyl(aquo) cobaloxime with histamine, histidine, glycine and ethyl glycine ester and iodomethyl(aquo) cobaloxime with cyanide, imidazole and substituted imidazoles were studied as a function ofpH at 25°C, 10 M ionic strength (KCl) by spectrophotometry technique. The rate of substitution of H₂O varies with thepKa of the incoming ligand, thus establishing the existence of nucleophilic participation of the ligand in the transition state. Dissociation kinetic reactions were also studied as a function ofpH. Binding and kinetic data were interpreted based on the basicity, steric crowd of the entering ligand and HSAB principle. To compare the rate constants of the entering ligandspH independent second-order rate constants were calculated.     

Coordination reaction of cobaloxime with 4-vinylpyridine-styrene copolymer

The equilibrium constants of the coordination reaction of chlorodimethylformamide·cobaloxime with 4-vinylpyridine–styrene copolymers (PPS) were determined. The constants for PPS, which contain 20–50% 4-vinylpyridine (4VP) unit, measured about 1.3 × 10⁵ liter/mole larger than those in the pyridine system (6.8 × 10⁴ liter/mole). When the polymer ligand is 4VP homopolymer or contains less than 20% 4VP unit, K values are lower. The rate constants (k_f) of the coordination reactions of the cobaloxime with polymer ligands were also measured in dimethylformamide (DMF) and benzene. In DMF k_f decreased with an increase in 4VP unit content of the polymer ligand; in benzene it was increased by the 4VP fraction. These results can be explained by the variation in conformation of the polymer chain in each solvent. The effect of the polymer chain on complexation was discussed on the basis of the kinetic data.     

Equilibria and kinetics for pH-dependent axial ligation of ethylester and methylester(aquo)cobaloximes with aromatic and aliphatic N-donor ligands and a molecular mechanistic study of the Co-C bond

Equilibrium constants are determined for the reaction of ethylester and methyl ester (aquo) cobaloximes with histamine, histidine, glycine and ethyl glycine ester as a function of pH at 25°C, using spectrophotometric technique. The functional dependence of pK _a on the substitution rate of H₂O varies with the pK _a of the incoming ligand, establishing the existence of nucleophilic participation of the ligand in the transition state. This data is interpreted with the help of kinetic data where dissociation kinetic reactions were also studied as a function of pH. Binding and kinetic data were correlated based on the basicity, steric hindrance of the entering ligand and HSAB principle. To compare the rate constants of the entering ligands pH-independent second-order rate constants were calculated. The effect of incoming ligand on Co-C bond is studied using molecular mechanics     

Synthesis of chiral SalenZn(II) and its coordination with imidazole derivatives and amino acid ester derivatives

A chiral complex, SalenZn(II) (S), was synthesized and characterized. Its coordination with imidazole derivatives and amino acid ester derivatives was studied by UV-vis spectrophotometric titrations and CD spectroscopy. The binding constants decreased in the order K (Im)>K (2-MeIm)>K (2-Et-4-MeIm)>K (N-MeIm) for imidazole derivatives, and K (AlaOMe)>K (PheOMe)>K (ValOMe) for amino acid ester derivatives with the same configuration and K _D >K _L for amino acid esters with different configuration. CD spectra can quantify the strength of SalenZn(II)-ligand interactions, giving results consistent with the magnitudes of the binding constants. Moreover the minimum energy conformations of the adducts were obtained by simulated annealing, and quantum chemical calculations were performed based on those conformations to explain experimental results at the molecular level.     

Equilibria and kinetics for pH-dependent axial ligation of bromomethyl(aquo)cobaloxime by aliphatic amine ligands

Kinetics and equilibria of axial ligation of bromomethyl(aquo) cobaloxime by a series of straight chain primary amines (methylamine, ethylamine, propylamine, butylamine, pentylamine, hexylamine), cycloamines (cyclopentylamine, cyclohexylamine, cycloheptylamine) and secondary amines (N,N-dimethylamine, N,N-diethylamine) have been measured as functions of pH by spectrophotometric technique in aqueous solution, ionic strength 1 M (KCl) at 25°C. The rate of substitution of H₂O varies with the pKa of incoming ligand, thus establishing nucleophilic participation of the ligand in the transition state. Binding and kinetic data are interpreted based on the basicity and steric influence of the entering ligand. To compare the rate constants of the entering ligands, pH independent second-order rate constants (k _on ) are calculated.     

Chromium(III) complexes with lutidinic acid: kinetic studies in HClO<Subscript>4</Subscript> and NaOH solutions

Chromium(III)-lutidinato complexes of general formula [Cr(lutH) _n (H₂O)_6−2n ]³⁻ⁿ (where lutH⁻ is N,O-bonded lutidinic acid anion) were obtained and characterized in solution. Acid-catalysed aquation of [Cr(lutH)₃]⁰ leads to only one ligand dissociation, whereas base hydrolysis produces chromates(III) as a result of subsequent ligand liberation steps. The kinetics of the first ligand dissociation were studied spectrophotometrically, within the 0.1–1.0 M HClO₄ and 0.4–1.0 M NaOH range. In acidic media, two reaction stages, the chelate-ring opening and the ligand dissociation, were characterized. The dependencies of pseudo-first-order rate constants on [H⁺] are as follows: k _obs1 = k ₁ + k ₋₁/K ₁[H⁺] and k _obs2 = k ₂ K ₂[H⁺]/(1 + K ₂[H⁺]), where k ₁ and k ₂ are the rate constants for the chelate-ring opening and the ligand dissociation, respectively, k ₋₁ is the rate constant for the chelate-ring closure, and K ₁ and K ₂ are the protonation constants of the pyridine nitrogen atom and coordinated 2-carboxylate group in the one-end bonded intermediate, respectively. In alkaline media, the rate constant for the first ligand dissociation depends on [OH⁻]: k _obs1 = k _OH(1) + k _O[OH⁻], where k _OH(1) and k _O are rate constants of the first ligand liberation from the hydroxo- and oxo-forms of the intermediate, respectively, and K ₂ is an equilibrium constant between these two protolytic forms. Kinetic parameters were determined and a mechanism for the first ligand dissociation is proposed. The kinetics of the ligand liberation from [Cr(lut)(OH)₄]³⁻ were also studied and the values of the pseudo-first-order rate constants are [OH⁻] independent.     

Use of Polyethylene Glycol (PEG) Based Aqueous Biphasic System (ABS) for the Extraction of Pu(IV), Pu(VI) and Am(III) with 18-Crown-6: A Thermodynamic Study

Extraction of Pu(IV), Pu(VI) and Am(III) using PEG-2000/ (NH₄)₂SO₄ (40% w/w of each) ABS with 18-crown-6 (18-C-6) as the extractant was studied at four fixed temperatures in the range 288 to 318 K. The distribution ratios follow the order: Pu(VI) > Pu(IV) > Am(III). The species extracted were identified to be [Pu·2(18-C-6)](SO₄)₂, [PuO₂·(18-C-6)]SO₄ and [Am·2(18-C-6)](SO₄)_1.5 for Pu(IV), Pu(VI) and Am(III), respectively. The equilibrium constants (K) evaluated for the extraction reactions follow the order, K _Pu(IV) > K _Pu(VI) > K _Am(III) as expected in accordance with the axial charge experienced by the incoming ligand (18-C-6). The thermodynamic parameters evaluated at 298 K showed the reaction to be stabilized by the decrease in enthalpy and counteracted by the decrease in entropy in all the three cases. The large decrease in the enthalpy observed in all the cases showed that there is direct bonding of crown ether to the central metal atom (i.e., the formation of inner sphere complex).     

Reactivity of cobaloxime bound to polystyrene chain by carbon–cobalt σ bond

The (alkyl)-bis(dimethylglyoximato)pyridinecobalt attached to polychloromethylstyrene by a cobalt–carbon bond was prepared by the reaction of Co(II)(DH)₂Py with polychloromethylstyrene in benzene. The fraction of p-vinylbenzyl·Co(DH)₂Py introduced to the polymer was 8.1 and 2.1 mole %. The photodecomposition of the polymer-bonded cobaloxime was investigated by following the change of the visible spectrum. The rate constant k_dec of the polymer-bonded cobaloxime was 1.1 × 10^?2 sec^?1 in benzene; it is one-fourth of that of its monomeric analog, benzyl·Co(DH)₂Py. The k_dec values of the cobaloximes were also measured in benzene–dimethyl sulfoxide mixed solvents, and the polymer effects were discussed. The dependence of the photodecomposition on energy of the irradiation light was investigated, and it was found that the absorption band near 470 nm is important for the photodecomposition of the cobalt–carbon bond. Spectroscopic measurements of the ligand exchange reaction of polymer-bonded cobaloxime with pyridine in dimethyl sulfoxide gave a larger equilibrium constant (1.2 × 10⁴ liter/mole) than that of benzyl·Co(DH)₂Py (9.4 × 10² liter/mole). The kinetic data of the ligand exchange reaction indicated that the larger equilibrium constant for the polymeric system is due to the smaller rate constant of the reverse reaction. The thermodynamic parameters were also obtained.     

Protolytic properties and complexation with copper(II) ions of some azo derivatives of β-arylaminopropionic acids

The azo coupling reaction of N-(2-carboxyethyl)anthranilic acid and N,N,N′,N′-tetrabis(2-carboxyethyl)-1,3-phenylenediamine with diazosulfanilic acid yielded the complexones sodium 4-N-(2-carboxyethyl)amino-5-carboxyazobenzene-4′-sulfonate (I) and 2,4-N,N,N′,N′-tetrabis(2-carboxyethyl)diaminoazobenzene-4′-sulfonic acid (II), respectively. The acidity constants of I and II (20°C, μ = 0.1M KCl) were determined to be as follows: for I, pK ₀₀ = 1.29 ± 0.13, pK ₀ = 2.92 ± 0.07, pK ₁ = 3.92 ± 0.05, pK ₂ = 5.16 ± 0.03; for II, pK ₀₀ = 2.35 ± 0.06, pK ₀ = 2.81 ± 0.09, pK ₁ = 3.21 ± 0.11, pK ₂ = 3.81 ± 0.09, pK ₃ = 4.34 ± 0.04, pK ₄ = 5.03 ± 0.06, pK ₅ = 6.67 ± 0.07. The electronic absorption spectra of I and II were measured, and acid-base equilibrium scheme for I and II in aqueous solutions were suggested. The complexation constants of I and II with copper(II) ions were determined to be logK _CuQ^I= 5.47 ± 0.06 and logK _CuQ^II= 5.72 ± 0.13 (20°C, μ = 0.1 M KCl).     

Influence of electrostatic effect on the stability of mixed-ligand complexes: Uranyl-complexone-phenol/phenolic acid ternary systems

The formation constants (logK _MAL ^MA ) of the complexes of the type (UO₂.A.L] (whereA = IMDA, NTA or EDTA;L = catechol, resorcinol, phloroglucinol, pyrogallol, β-resorcylic acid or protocatechuic acid) have been determined potentiometrically at 25°C and ionic strength,I = 0·2 (mol dm⁻³, NaClO₄) using the Irving-Rossotti approach. The formation constants of the binary complexes (logK _KMA ^KM ) have been found to lie in the sequence IMDA < NTA < EDTA, whereas those for the mixed ligand complexes (logK _MAL ^MA ) follow the reverse sequence, IMDA > NTA > EDTA. due to the electrostatic effect.     

Kinetic study on the ligand exchange reactions between bis(alkylxanthato)palladium(II)and bis(N,N-dialkyldithiocarbamato)palladium(II)by high-performance liquid chromatography

The rate constants and equilibrium constants of ligand exchange reactions between his(alkylxanthato)palladium(Ⅱ),Pd(S_2COR)_2(R=Am,n-Hex,Bz),and bis(N,N-dialkyldithiocarbamato)palladium(Ⅱ),Pd(S_2CNR_2)_2(K=Et,n-Pr,n-Bu),in chloroform solution have been determined ina temperature range of 20—50°C by means of high-performance liquid chromatography.It was foundthat both the forward and reverse reactions are of second order.All of the equilibrium constants Kdetermined are 10.3±1.0,much greater than the value(K=4)calculated statistically which indicatesthat the ternary complexes are more stable than the binary complexes.The experimental resultsrevealed that the reaction rate decreases with the increase in the size of R and R~1 groups and the latterare more remarkable,consistent with the deduction of steric effect.The activation parameters ofthe reactions have been calculated.In reaction series(11)and(12)(in the text)the isokinetic tempera-tures B=390±8K and β=346±15 K have been observed respectively.A plausiblemechanism in-volving an eight-membered ring intermediate has been proposed on the basis of experimental results.     

Kinetics and mechanism of interaction of Pt(II) complex with bio-active ligands and in vitro Pt(II)-sulfur adduct formation in aqueous medium: bio-activity and computational study

Kinetics of interaction between [Pt(pic)(H₂O)₂](ClO₄)₂, 2 (where pic = 2-aminomethylpyridine) with the selected ligands DL-methionine (DL-meth) and DL-penicillamine (DL-pen) have been studied spectrophotometrically in aqueous medium separately as a function of [2] as well as [ligand], pH and temperature at constant ionic strength. The association equilibrium constants (K_E) for the outer sphere complex formation have been evaluated together with the rate constants for the two subsequent steps. Activation parameters (enthalpy of activation ΔH^≠ and entropy of activation ΔS^≠) were calculated from the Eyring equation. An associative mechanism of substitution is proposed for both reactions on the basis of the kinetic observations, evaluated activation parameters, and spectroscopic data. Structural optimizations, HOMO-LUMO energy calculation, and Natural Bond Orbital (NBO) analysis of 2–4 were carried out with Density Functional Theory. Bonding mode of thiol and thio-ether is confirmed by spectroscopic analyses and NBO calculation. Cytotoxic properties of 2–4 were explored on A549 carcinoma cell lines; DNA-binding properties of the complexes were also investigated by gel electrophoresis.     

Coenzyme B12 model studies: An HSAB approach to the equilibria and kinetics of axial ligation of alkyl(aquo)-cobaloximes by imidazole and cyanide

Kinetics and equilibria of the axial ligation of alkyl(aquo)cobaloximes by imidazole and cyanide have been measured spectrophotometrically in aqueous solutions of ionic strength 1.0 M at 25°C as a function of pH. Comparison of K_IMD and K_CN- of CH₃, C₂H₅ and BrCH₂cobaloximes indicates that their stability is in the order BrCH₂>CH₃>C₂H₂. As the electron-withdrawing capacity of the alkyl grouptrans to water increases, the electron density of the cobalt(III) decreases and thus it becomes a stronger Lewis acid and binds more strongly to imidazole and cyanide. The association and dissociation rate constants are better correlated to the relative softness of the ligand showing that cyanide binds 30 times faster than imidazole. These complexes are isolated and are characterized by IR and¹H NMR spectra.     

1,3-THIAZOLIDINIC AND 2,4,5,6-TETRAHYDRO-1,3-THIAZINIC SPIROCHROMENES AND MEROCYANINES. SYNTHESIS,REACTIVITY AND PHOTOCHROMIC PROPERTIES

Abstract

The acid catalyzed rate for hydrolysis of methylphosponfluoridic acid has been determined at several hydrogen ion concentrations and temperatures. The acid hydrolysis is second order (in acid and substrate). Assumed rate expressions, observed rate constants, and hydrogen ion concentrations were used to calculate the thermodynamic equilibrium constant (K _a=0.56) and rate constants for acid catalysis. The activation energy E _a has been determined as 18.3 Kcal/mole. Finally, the acid catalyzed deuterolysis was determined to be about 1.47 times the rate of hydrolysis. The data suggest a two-step mechanism consisting of a rapid proton transfer, followed by slow hydration of the protonated complex.     

Mass Spectrometric Determination of Association Constants of Bovine Serum Albumin (BSA) with para-Sulphonato-Calix[n]arene Derivatives

Electrospray Ionization Mass Spectrometry (ESI/MS) has been used to determine the association constants (K_As) and binding stoichiometries for parent para-Sulphonato-calix[n]arenes and their derivatives with bovine serum albumin (BSA). K_A values were determined by titration experiments using a constant concentration of protein. K_A measurements were carried out in a methanol–formic acid solution. 5,11,17,23–tetra-Sulphonato-calix[4]arene (1a) and 25-mono-(2-aminoethoxy)-5,11,17,23-tetra-Sulphonato-calix[4]arene (1d) interact strongly with BSA showing 3 non-equivalent binding sites with K_A1 = 7.69 × 10⁵ M⁻¹, K_A2 = 3.85 × 10⁵ M⁻¹, K_A3 = 0.33 × 10⁵ M⁻¹ and K_A1 = 1.69 × 10⁵ M⁻¹, K_A2 = 2.94 × 10⁵ M⁻¹, K_A3 = 0.60 × 10⁵ M⁻¹, respectively. The strength of the interactions between the calixarene and BSA is inversely proportional to the size of macrocyclic ring: n = 4 > n=6>>n=8.     

Comparing the Affinities of Flavonoid Isomers with Protein by Fluorescence Spectroscopy

Abstract

Dietary flavonoids can be detected in plasma as protein‐bound conjugates. Flavonoids–protein interaction is expected to modulate the bioavailability of flavonoids. In this work, the binding flavonoid isomers (galangin, baicalein, apigenin, and genistein; MW=270.25) and B‐ring hydroxylation flavonols (galangin, kaempferol, quercetin, and myricetin, which share the same structure on the A and C rings but have 0, 1, 2, and 3 moieties of ‐OH on the B‐ring, respectively) to protein were investigated by fluorescence quenching method. The apparent binding constants (K _a ) of were flavonoid isomers determined as: flavones (10⁶–10⁷ L mol^?1)>isoflavone≈flavonol (10⁵ L mol^?1). For B‐ring hydroxylation flavonols, the binding affinity increased with increasing number of hydroxyl groups on the B‐ring. The binding constants (K _a ) were determined as follows: myricetin>quercetin>kaempferol>galangin.     

SPIN-CROSSOVER OF [Fe(Cl-BZIMPY)2](ClO4)2 INDUCED BY DEPROTONATION

Abstract

The ligand 4-Cl-2,6-bis(benzimidazol-2′-yl)-pyridine(Cl-bzimpy;H₂L) acts as a bidentate when coordinated with transition metal ions and the complex [Fe(Cl-bzimpy)₂](ClO₄)₂ was isolated as a solid. The protonation constants (logK). The free ligand and the complex were evaluated in 30:70 (v/v) H₂O:EtOH at room temperature and ionic strength of 0.13M (KCl). Coordination of the ligand to the metal ion leads to an increase of the acidity of the imino-hydrogen of the benzimidazole group. Deprotonation leads to a change in the spin-state (to the low-spin state; HS → LS transition) of the complex associated with a decrease in the spin-crossover equilibrium constant (K_sc). An opposite shift of spin-state is observed when HClO₄ is added to the complex solution, thus showing the reversibility of the process.     

BATHOPRODUCTS and CONFORMERS OF ALL-trans-AND 13-ds BACTERIORHODOPSIN AT 90 K*

Abstract– At 90 K the photoproduct of the primary light reaction of (rani-bacteriorhodopsin, the bathoproduct K¹ consists of a mixture of at least three spectrally different species, K¹_I, K¹_II, and K¹_III having maxima in the difference absorption spectra at 645, 635 and 625 nm, respectively. The bathoproducts differ in their long wavelength absorption bands and in their rate constants for photo-conversion to trans-bacteriorhodopsin under far red light irradiation (λ > 720 nm). The bathoproducts are formed from different precursors–conformers of trans-bacteriorhodopsin, which are stable at 90 K, but are in equilibrium with each other at 213 K. We suggest that the bathoproducts may initiate parallel conversion cycles of trans-bacteriorhodopsin at low temperatures. The primary photoreaction of 13-cis-bacteriorhodopsin also yields three bathoproducts, K^c_I, K^c_II and K^c_III having maxima in the difference absorption spectra at 615, 605 and 595 nm, respectively.     

The steric hindrance controlled [2]pseudorotaxanes constructed by V-type stilbene dyes⊂CB[7]

In this paper, five V-type stilbene dyes (VD, 1a-1e) that had unchanged dimethylamino phenylethenyl (DMPE) arm as inclusive location with CB[7] and another arm with different steric hindrance aryloxyethyl (AE) group were designed and synthesized. Their inclusive characteristics and stability to CB[7] were studied. Fluorescence spectroscopy and ¹H NMR method were used respectively to study the inclusive characteristics of 1a?CB[7], 1b?CB[7], 1c?CB [7], 1d?CB[7] and 1e?CB[7]. Fitting curves results of fluorescent titration indicated that 1:1 complexes between CB[7] and VD were constructed, and their inclusive constants were calculated respectively. The order of inclusive constants K_1a?CB[7]> K_1b?CB[7]> K_1c?CB[7] > K_1d?CB[7] was consistent with the magnitude of the steric hindrance, however, 1e did not include with CB[7]. Therefore, a series of steric hindrance controlled [2]pseudorotaxanes were constructed.