Two‐Color Valence‐to‐Core X‐ray Emission Spectroscopy Tracks Cofactor Protonation State in a Class I Ribonucleotide Reductase

Proton transfer reactions are of central importance to a wide variety of biochemical processes, though determining proton location and monitoring proton transfers in biological systems is often extremely challenging. Herein, we use two‐color valence‐to‐core X‐ray emission spectroscopy (VtC XES) to identify protonation events across three oxidation states of the O₂‐activating, radical‐initiating manganese–iron heterodinuclear cofactor in a class I‐c ribonucleotide reductase. This is the first application of VtC XES to an enzyme intermediate and the first simultaneous measurement of two‐color VtC spectra. In contrast to more conventional methods of assessing protonation state, VtC XES is a more direct probe applicable to a wide range of metalloenzyme systems. These data, coupled to insight provided by DFT calculations, allow the inorganic cores of the Mn^IVFe^IV and Mn^IVFe^III states of the enzyme to be assigned as Mn^IV(μ‐O)₂Fe^IV and Mn^IV(μ‐O)(μ‐OH)Fe^III, respectively.     

A Diiron(III,IV) Imido Species Very Active in Nitrene‐Transfer Reactions

Metal‐catalyzed nitrene transfer reactions arouse intense interest as clean and efficient procedures for amine synthesis. Efficient Rh‐ and Ru‐based catalysts exist but Fe alternatives are actively pursued. However, reactive iron imido species can be very short‐lived and getting evidence of their occurrence in efficient nitrene‐transfer reactions is an important challenge. We recently reported that a diiron(III,II) complex is a very efficient nitrene‐transfer catalyst to various substrates. We describe herein how, by combining desorption electrospray ionization mass spectrometry, quantitative chemical quench experiments, and DFT calculations, we obtained conclusive evidence for the occurrence of an {Fe^IIIFe^IV?NTosyl} intermediate that is very active in H‐abstraction and nitrene‐transfer reactions. DFT calculations revealed a strong radical character of the tosyl nitrogen atom in very low‐lying electronic configurations of the Fe^IV ion which are likely to confer its high reactivity.     

Selective oxidation of benzyl alcohol to benzaldehyde, 1‐phenylethanol to acetophenone and fluorene to fluorenol catalysed by iron (II) complexes supported by pincer‐type ligands: Studies on rapid degradation of organic dyes

Hexacoordinated non‐heme iron complexes [Fe^II(L¹)₂](ClO₄)₂ ( 1 ) and [Fe^II(L²)₂](PF₆)₂ ( 2 ) have been synthesized using ligands L¹ = (E)‐2‐chloro‐6‐(2‐(pyridin‐2ylmethylene) hydrazinyl)pyridine and L² = (E)‐2‐chloro‐6‐(2‐(1‐(pyridin‐2‐yl)ethylidene)hydrazinyl) pyridine]. These complexes are highly active non‐heme iron catalysts to catalyze the C (sp³)?H bonds of alkanes. These iron complexes have been characterized using ESI?MS analysis and molecular structures were determined by X‐ray crystallography. ESI ? MS analysis also helped to understand the generation of intermediate species like Fe^III?OOH and Fe^IV=O. DFT and TD?DFT calculations revealed that the oxidation reactions were performed through high‐valent iron center and a probable reaction mechanism was proposed. These complexes were also utilized for the degradation of orange II and methylene blue dyes.     

On the Catalytic Mechanism of (S)‐2‐Hydroxypropylphosphonic Acid Epoxidase (HppE): A Hybrid DFT Study

The mechanism of oxidative epoxidation catalyzed by HppE, which is the ultimate step in the biosynthesis of fosfomycin, was studied by using hybrid DFT quantum chemistry methods. An active site model used in the computations was based on the available crystal structure for the HppE‐Fe^II‐(S)‐HPP complex and it comprised first‐shell ligands of iron as well as second‐shell polar groups interacting with the substrates. The reaction energy profiles were constructed for three a priori plausible mechanisms proposed in the literature, and it was found that the most likely scenario for the native substrate, that is, (S)‐HPP, involves generation of the reactive Fe^III? O ^. /Fe^IV?O species, which is responsible for the C? H bond‐cleavage. At the subsequent reaction stage, the OH‐rebound, which would lead to a hydroxylated product, is prevented by a fast protonation of the OH ligand and, as a result, ring closure is the energetically preferred step. For the R enantiomer of the substrate ((R)‐HPP), which is oxidized to a keto product, comparable barrier heights were found for the C? H bond activation by both the Fe^III? O₂ ^. and Fe^IV?O species.     

Hydroxylation of Aromatics with the Help of a Non‐Haem FeOOH: A Mechanistic Study under Single‐Turnover and Catalytic Conditions

Ferric–hydroperoxo complexes have been identified as intermediates in the catalytic cycle of biological oxidants, but their role as key oxidants is still a matter of debate. Among the numerous synthetic low‐spin Fe^III(OOH) complexes characterized to date, [(L₅²)Fe(OOH)]²⁺ is the only one that has been isolated in the solid state at low temperature, which has provided a unique opportunity for inspecting its oxidizing properties under single‐turnover conditions. In this report we show that [(L₅²)Fe(OOH)]²⁺ decays in the presence of aromatic substrates, such as anisole and benzene in acetonitrile, with first‐order kinetics. In addition, the phenol products are formed from the aromatic substrates with similar first‐order rate constants. Combining the kinetic data obtained at different temperatures and under different single‐turnover experimental conditions with experiments performed under catalytic conditions by using the substrate [1,3,5‐D₃]benzene, which showed normal kinetic isotope effects (KIE>1) and a notable hydride shift (NIH shift), has allowed us to clarify the role played by Fe^III(OOH) in aromatic oxidation. Several lines of experimental evidence in support of the previously postulated mechanism for the formation of two caged Fe^IV(O) and OH ^. species from the Fe^III(OOH) complex have been obtained for the first time. After homolytic O? O cleavage, a caged pair of oxidants [Fe^IVO+HO ^. ] is generated that act in unison to hydroxylate the aromatic ring: HO ^. attacks the ring to give a hydroxycyclohexadienyl radical, which is further oxidized by Fe^IVO to give a cationic intermediate that gives rise to a NIH shift upon ketonization before the final re‐aromatization step. Spin‐trapping experiments in the presence of 5,5‐dimethyl‐1‐pyrroline N‐oxide and GC‐MS analyses of the intermediate products further support the proposed mechanism.     

Mechanistic Insight into Peroxo‐Shunt Formation of Biomimetic Models for Compound II,Their Reactivity toward Organic Substrates,and the Influence of N‐Methylimidazole Axial Ligation

High‐valent iron‐oxo species have been invoked as reactive intermediates in catalytic cycles of heme and nonheme enzymes. The studies presented herein are devoted to the formation of compound II model complexes, with the application of a water soluble (TMPS)Fe^III(OH) porphyrin ([meso‐tetrakis(2,4,6‐trimethyl‐3‐sulfonatophenyl)porphinato]iron(III) hydroxide) and hydrogen peroxide as oxidant, and their reactivity toward selected organic substrates. The kinetics of the reaction of H₂O₂ with (TMPS)Fe^III(OH) was studied as a function of temperature and pressure. The negative values of the activation entropy and activation volume for the formation of (TMPS)Fe^IV?O(OH) point to the overall associative nature of the process. A pH‐dependence study on the formation of (TMPS)Fe^IV?O(OH) revealed a very high reactivity of OOH^? toward (TMPS)Fe^III(OH) in comparison to H₂O₂. The influence of N‐methylimidazole (N‐MeIm) ligation on both the formation of iron(IV)‐oxo species and their oxidising properties in the reactions with 4‐methoxybenzyl alcohol or 4‐methoxybenzaldehyde, was investigated in detail. Combined experimental and theoretical studies revealed that among the studied complexes, (TMPS)Fe^III(H₂O)(N‐MeIm) is highly reactive toward H₂O₂ to form the iron(IV)‐oxo species, (TMPS)Fe^IV?O(N‐MeIm). The latter species can also be formed in the reaction of (TMPS)Fe^III(N‐MeIm)₂ with H₂O₂ or in the direct reaction of (TMPS)Fe^IV?O(OH) with N‐MeIm. Interestingly, the kinetic studies involving substrate oxidation by (TMPS)Fe^IV?O(OH) and (TMPS)Fe^IV?O(N‐MeIm) do not display a pronounced effect of the N‐MeIm axial ligand on the reactivity of the compound II mimic in comparison to the OH^? substituted analogue. Similarly, DFT computations revealed that the presence of an axial ligand (OH^? or N‐MeIm) in the trans position to the oxo group in the iron(IV)‐oxo species does not significantly affect the activation barriers calculated for C?H dehydrogenation of the selected organic substrates.     

Selective Formation of an FeIVO or an FeIIIOOH Intermediate From Iron(II) and H2O2: Controlled Heterolytic versus Homolytic Oxygen–Oxygen Bond Cleavage by the Second Coordination Sphere

We demonstrate that the devised incorporation of an alkylamine group into the second coordination sphere of an Fe^II complex allows to switch its reactivity with H₂O₂ from the usual formation of Fe^III species towards the selective generation of an Fe^IV‐oxo intermediate. The Fe^IV‐oxo species was characterized by UV/Vis absorption and Mössbauer spectroscopy. Variable‐temperature kinetic analyses point towards a mechanism in which the heterolytic cleavage of the O?O bond is triggered by a proton transfer from the proximal to the distal oxygen atom in the Fe^II‐H₂O₂ complex with the assistance of the pendant amine. DFT studies reveal that this heterolytic cleavage is actually initiated by an homolytic O?O cleavage immediately followed by a proton‐coupled electron transfer (PCET) that leads to the formation of the Fe^IV‐oxo and release of water through a concerted mechanism.     

Facile Self‐Assembly of Metallo‐Supramolecular Ring‐in‐Ring and Spiderweb Structures Using Multivalent Terpyridine Ligands

A series of metallo‐supramolecular ring‐in‐ring structures was generated by assembling Cd^II ions and the multivalent terpyridine ligands ( L^1‐3 ) composed of one 60°‐bent and two 120°‐bent bis(terpyridine)s with varying alkyl linker lengths. The mechanistic study for the self‐assembly process excluded an entropically templated pathway and showed that the intramolecularly complexed species is the key intermediate leading to ring‐in‐ring formation. The next‐generation superstructure, a spiderweb, was produced in quantitative yield using the elongated decakis(terpyridine) ligand ( L⁵ ).     

On the Stability of PtIV Pro‐Drugs with Haloacetato Ligands in the Axial Positions

The design of Pt^IV pro‐drugs as anticancer agents is predicated on the assumption that they will not undergo substitution reactions before entering the cancer cell. Attempts to improve the cytotoxic properties of Pt^IV pro‐drugs included the use of haloacetato axial ligands. Herein, we demonstrate that Pt^IV complexes with trifluoroacetato (TFA) or dichloroacetato (DCA) ligands can be unstable under biologically relevant conditions and readily undergo hydrolysis, which results in the loss of the axial TFA or DCA ligands. The half‐lives for Pt^IV complexes with two TFA or DCA ligands at pH 7 and 37 °C range from 6 to 800 min, which is short relative to the duration of cytotoxicity experiments that last 24–96 h. However, complexes with two monochloroacetato (MCA) or acetato axial ligands are stable under biologically relevant conditions. The loss of the axial ligands depends primarily on the electron‐withdrawing strength of the axial ligands, but also upon the nature of the equatorial ligands. We were unable to find obvious correlations between the structures of the Pt^IV complexes and the rates of decay of the parent compounds. The X‐ray crystal structures of the bis‐DCA and bis‐MCA Pt^IV derivatives of oxaliplatin did not reveal any significant structural differences that could explain the observed differences in stability.     

Palladium‐Catalyzed Intramolecular Reductive Cross‐Coupling of Csp2Csp3 Bond Formation

A Pd‐catalyzed efficient reductive cross‐coupling reaction without metallic reductant to construct a Csp²?Csp³ bond has been reported. A Pd^IV complex was proposed to be a key intermediate, which subsequently went through double oxidative addition and double reductive elimination to produce the cross‐coupling products by involving Pd^0/II/IV in one transformation. The oxidative addition from Pd^II to Pd^IV was partially demonstrated to be a radical process by self‐oxidation of substrate without additional oxidants. Furthermore, the solvent was proved to be the reductant for this transformation through XPS analysis.     

Site‐Selective Ligand Exchange on a Heteroleptic TiIV Complex Towards Stepwise Multicomponent Self‐Assembly

A series of heteroleptic [Ti 1 ₂X]^? complexes have been selectively constructed from a mixture of Ti^IV ions, a pyridyl catechol ligand (H₂ 1 ; H₂ 1 =4‐(3‐pyridyl)catechol), and various bidentate ligands (HX) in the presence of a weak base, in addition to a previously reported [Ti 1 ₂(acac)]^? (acac=acetylacetonate) complex. Comparative studies of these Ti^IV complexes revealed that [Ti 1 ₂(trop)]^? (trop=tropolonate) is much more stable than the [Ti 1 ₂(acac)]^? complex, which allows the replacement of acac with trop on the [Ti 1 ₂(acac)]^? complex. This Ti^IV‐centered site‐selective ligand exchange reaction also takes place on a heteronuclear Pd^II? Ti^IV ring complex with the preservation of the Pd^II‐centered coordination structures. Intra‐ and intermolecular linking between two Ti^IV centers with a flexible or a rigid bis‐tropolone bridging ligand provided a tetranuclear and an octanuclear Pd^II? Ti^IV complex, respectively. These higher‐order structures could be efficiently constructed only through a stepwise synthetic route.     

Intramolecular Gas‐Phase Reactions of Synthetic Nonheme Oxoiron(IV) Ions: Proximity and Spin‐State Reactivity Rules

The intramolecular gas‐phase reactivity of four oxoiron(IV) complexes supported by tetradentate N₄ ligands ( L ) has been studied by means of tandem mass spectrometry measurements in which the gas‐phase ions [Fe^IV(O)( L )(OTf)]⁺ (OTf=trifluoromethanesulfonate) and [Fe^IV(O)( L )]²⁺ were isolated and then allowed to fragment by collision‐induced decay (CID). CID fragmentation of cations derived from oxoiron(IV) complexes of 1,4,8,11‐tetramethyl‐1,4,8,11‐tetraazacyclotetradecane (tmc) and N,N′‐bis(2‐pyridylmethyl)‐1,5‐diazacyclooctane ( L ⁸Py₂) afforded the same predominant products irrespective of whether they were hexacoordinate or pentacoordinate. These products resulted from the loss of water by dehydrogenation of ethylene or propylene linkers on the tetradentate ligand. In contrast, CID fragmentation of ions derived from oxoiron(IV) complexes of linear tetradentate ligands N,N′‐bis(2‐pyridylmethyl)‐1,2‐diaminoethane (bpmen) and N,N′‐bis(2‐pyridylmethyl)‐1,3‐diaminopropane (bpmpn) showed predominant oxidative N‐dealkylation for the hexacoordinate [Fe^IV(O)( L )(OTf)]⁺ cations and predominant dehydrogenation of the diaminoethane/propane backbone for the pentacoordinate [Fe^IV(O)( L )]²⁺ cations. DFT calculations on [Fe^IV(O)(bpmen)] ions showed that the experimentally observed preference for oxidative N‐dealkylation versus dehydrogenation of the diaminoethane linker for the hexa‐ and pentacoordinate ions, respectively, is dictated by the proximity of the target C? H bond to the oxoiron(IV) moiety and the reactive spin state. Therefore, there must be a difference in ligand topology between the two ions. More importantly, despite the constraints on the geometries of the TS that prohibit the usual upright σ trajectory and prevent optimal σ_CH–σ* overlap, all the reactions still proceed preferentially on the quintet (S=2) state surface, which increases the number of exchange interactions in the d block of iron and leads thereby to exchange enhanced reactivity (EER). As such, EER is responsible for the dominance of the S=2 reactions for both hexa‐ and pentacoordinate complexes.     

Multinuclear Diffusion NMR Spectroscopy and DFT Modeling: A Powerful Combination for Unraveling the Mechanism of Phosphoester Bond Hydrolysis Catalyzed by Metal‐Substituted Polyoxometalates

A detailed reaction mechanism is proposed for the hydrolysis of the phosphoester bonds in the DNA model substrate bis(4‐nitrophenyl) phosphate (BNPP) in the presence of the Zr^IV‐substituted Keggin type polyoxometalate (Et₂NH₂)₈[{α‐PW₁₁O₃₉Zr(μ‐OH) (H₂O)}₂] ? 7 H₂O (ZrK 2:2) at pD 6.4. Low‐temperature ³¹P DOSY spectra at pD 6.4 gave the first experimental evidence for the presence of ZrK 1:1 in fast equilibrium with ZrK 2:2 in purely aqueous solution. Moreover, theoretical calculations identified the ZrK 1:1 form as the potentially active species in solution. The reaction intermediates involved in the hydrolysis were identified by means of ¹H/³¹P NMR studies, including EXSY and DOSY NMR spectroscopy, which were supported by DFT calculations. This experimental/theoretical approach enabled the determination of the structures of four intermediate species in which the starting compound BNPP, nitrophenyl phosphate (NPP), or the end product phosphate (P) is coordinated to ZrK 1:1. In the proposed reaction mechanism, BNPP initially coordinates to ZrK 1:1 in a monodentate fashion, which results in hydrolysis of the first phosphoester bond in BNPP and formation of NPP. EXSY NMR studies showed that the bidentate complex between NPP and ZrK 1:1 is in equilibrium with monobound and free NPP. Subsequently, hydrolysis of NPP results in P, which is in equilibrium with its monobound form.     

A Non‐Heme Iron Photocatalyst for Light‐Driven Aerobic Oxidation of Methanol

Non‐heme (L)Fe^III and (L)Fe^III‐O‐Fe^III(L) complexes (L=1,1‐di(pyridin‐2‐yl)‐N,N‐bis(pyridin‐2‐ylmethyl)ethan‐1‐amine) underwent reduction under irradiation to the Fe^II state with concomitant oxidation of methanol to methanal, without the need for a secondary photosensitizer. Spectroscopic and DFT studies support a mechanism in which irradiation results in charge‐transfer excitation of a Fe^III?μ‐O?Fe^III complex to generate [(L)Fe^IV=O]²⁺ (observed transiently during irradiation in acetonitrile), and an equivalent of (L)Fe^II. Under aerobic conditions, irradiation accelerates reoxidation from the Fe^II to the Fe^III state with O₂, thus closing the cycle of methanol oxidation to methanal.     

Insights into the Desaturation of Cyclopeptin and its C3 Epimer Catalyzed by a non‐Heme Iron Enzyme: Structural Characterization and Mechanism Elucidation

AsqJ, an iron(II)‐ and 2‐oxoglutarate‐dependent enzyme found in viridicatin‐type alkaloid biosynthetic pathways, catalyzes sequential desaturation and epoxidation to produce cyclopenins. Crystal structures of AsqJ bound to cyclopeptin and its C3 epimer are reported. Meanwhile, a detailed mechanistic study was carried out to decipher the desaturation mechanism. These findings suggest that a pathway involving hydrogen atom abstraction at the C10 position of the substrate by a short‐lived Fe^IV‐oxo species and the subsequent formation of a carbocation or a hydroxylated intermediate is preferred during AsqJ‐catalyzed desaturation.     

Identification and Spectroscopic Characterization of Nonheme Iron(III) Hypochlorite Intermediates

Fe^III–hypohalite complexes have been implicated in a wide range of important enzyme‐catalyzed halogenation reactions including the biosynthesis of natural products and antibiotics and post‐translational modification of proteins. The absence of spectroscopic data on such species precludes their identification. Herein, we report the generation and spectroscopic characterization of nonheme Fe^III–hypohalite intermediates of possible relevance to iron halogenases. We show that Fe^III‐OCl polypyridylamine complexes can be sufficiently stable at room temperature to be characterized by UV/Vis absorption, resonance Raman and EPR spectroscopies, and cryo‐ESIMS. DFT methods rationalize the pathways to the formation of the Fe^III‐OCl, and ultimately Fe^IV?O, species and provide indirect evidence for a short‐lived Fe^II‐OCl intermediate. The species observed and the pathways involved offer insight into and, importantly, a spectroscopic database for the investigation of iron halogenases.     

Intramolecular Oxidative O‐Demethylation of an Oxoferryl Porphyrin Complexed with a Per‐O‐methylated β‐Cyclodextrin Dimer

The intramolecular oxidation of ROCH₃ to ROCH₂OH, where the latter compound spontaneously decomposed to ROH and HCHO, was observed during the reaction of the supramolecular complex (met‐hemoCD3) with cumene hydroperoxide in aqueous solution. Met‐hemoCD3 is composed of meso‐tetrakis(4‐sulfonatophenyl)porphinatoiron(III) (Fe^IIITPPS) and a per‐O‐methylated β‐cyclodextrin dimer having an ‐OCH₂PyCH₂O‐ linker (Py=pyridine‐3,5‐diyl). The O=Fe^IVTPPS complex was formed by the reaction of met‐hemoCD3 with cumene hydroperoxide, and isolated by gel‐filtration chromatography. Although the isolated O=Fe^IVTPPS complex in the cyclodextrin cage was stable in aqueous solution at 25 °C, it was gradually converted to Fe^IITPPS (t_1/2=7.6 h). This conversion was accompanied by oxidative O‐demethylation of an OCH₃ group in the cyclodextrin dimer. The results indicated that hydrogen abstraction by O=Fe^IVTPPS from ROCH₃ yields HO‐Fe^IIITPPS and ROCH₂^.. This was followed by radical coupling to afford Fe^IITPPS and ROCH₂OH. The hemiacetal (ROCH₂OH) immediately decomposed to ROH and HCHO. This study revealed the ability of oxoferryl porphyrin to induce two‐electron oxidation.