Quantification of naphthalenes in jet fuel with GC x GC/Tri-PLS and windowed rank minimization retention time alignment

Comprehensive, two-dimensional gas chromatography (GC x GC) is used in conjunction with trilinear partial least squares (Tri-PLS) to quantify the percent weight of naphthalenes (two-ring aromatic compounds) in jet fuel samples. The increased peak capacity and selectivity of GC x GC makes the technique attractive for the rapid, and possibly less tedious analysis of jet fuel. The analysis of complex mixtures by GC x GC is further enhanced through the use of chemometric techniques, including those designed for use on 2-D data such as Tri-PLS. Unfortunately, retention time variation, unless corrected, can be an impediment to chemometric analysis. Previous work has demonstrated that the effects of retention time variation can be mitigated in sub-regions of GC x GC chromatograms through the application of an objective retention time alignment algorithm based on rank minimization. Building upon this previous work, it is demonstrated here that the effects of retention time variation can be mitigated throughout an entire GC x GC chromatogram with an objective retention time alignment algorithm based on windowed rank minimization alignment. A significant decrease in calibration error is observed when the algorithm is applied to chromatograms prior to construction of Tri-PLS models. Fourteen jet fuel samples with known weight percentages of naphthalenes (ASTM D1840) were obtained. Each sample was subjected to five replicate five-minute GC x GC separations over a period of two days. A subset of nine samples spanning the range of weight percentages of naphthalenes was chosen as a calibration set and Tri-PLS calibration models were subsequently developed in order to predict the naphthalene content of the samples from the GC x GC chromatograms of the remaining five samples. Calibration models constructed from GC x GC chromatograms that were retention time corrected are shown to exhibit a root mean square error of prediction of roughly half that of calibration models constructed from uncorrected chromatograms. The error of prediction is lowered further to a value that nearly matches the uncertainty in the standard percent weight values (ca. 1% of the median percent volume value) when the aligned chromatograms are truncated to include only regions of the chromatogram populated by naphthalenes and compounds of similar polarity and boiling point.     

Effects of pressure drop on absolute retention matching in comprehensive two-dimensional gas chromatography

Comprehensive two-dimensional gas chromatography (GC x GC) analysis has the capability to resolve many more components of complex mixtures than traditional single column GC analysis. There is an increasing need to provide reliable identification of these separated components; time-of-flight mass spectrometry (TOFMS) is the most appropriate technology to achieve this task. Rather than require MS for all GC x GC separations, it is desirable to assign peak identities to specific peak positions in the GC x GC separation space, and this necessitates matching peak retentions in the two experiments - GC x GC-FID and GC x GC-TOFMS. The atmospheric vs. vacuum outlet conditions confound this task. It is shown here that by employing a supplementary gas supply, provided to a T-union between the column outlet and the MS interface, it is possible to generate 2D chromatograms for GC x GC-FID and GC x GC-TOFMS that are essentially exactly matched. There is no degradation in separation performance or efficiency in the second column in the system interfaced to the T-union. Since the GC x GC-FID experiment uses hydrogen for maximum efficiency, and GC x GC-TOFMS uses helium carrier, translation of (conditions/retentions) must account for the different viscosities of the carrier gases. Translation of conditions is based on well-known principles established in single column analysis. Tabulated data illustrate that retention reproducibility was of the order of better than 4 s for the average first dimension retention difference, and about 40 ms for the average second dimension retention difference when comparing GC x GC-FID and GC x GC-TOFMS results. This should provide considerable support for identification in routine GC x GC-FID analysis of specific sample types, once the peaks in 2D separation space have been assigned identities through GC x GC-TOFMS analysis.     

Identification of unknown compounds on the basis of retention index data in comprehensive two-dimensional gas chromatography

The identification of unknown compounds in complex samples is very difficult. Comprehensive two-dimensional gas chromatography (GC x GC) provides very good resolution and improved identification reliability. Mass spectrometry is a powerful identification tool and retention index data are another good approach to this end. In this study, a second-order polynomial was used to calculate retention index data based on n-alkanes beyond the region of the 'isovolatile' curve in GC x GC, and the results in the 2nd dimension were validated by using the same stationary phase column in one-dimensional GC. To test the usefulness of the method, volatile compounds in a tobacco leaf extract fraction were analyzed using GC x GC, and 60 compounds were identified on the basis of their retention indices.     

Enantiomeric separation of chiral polychlorinated biphenyls on beta-cyclodextrin capillary columns by means of heart-cut multidimensional gas chromatography and comprehensive two-dimensional gas chromatography. Application to food samples

Three commercially available chiral capillary columns, Chirasil-Dex, BGB-176SE, and BGB-172, have been evaluated for the separation into enantiomers of the 19 chiral polychlorinated biphenyls (PCB) congeners stable at room temperature. The enantiomers of 15 chiral PCBs were, at least to some extent, separated using these beta-cyclodextrin based columns. Multidimensional techniques, such as heart-cut multi-dimensional gas chromatography (heart-cut MDGC) and comprehensive two-dimensional gas chromatography (GC x GC), were investigated for their ability to solve coelution problems with other PCBs present in commercial mixtures and real-life samples. Heart-cut MDGC improved the separation as compared to one-dimensional GC, and enantiomeric fractions of the investigated chiral PCBs could be determined free from interferences. However, limitations on the number of target compounds that can be transferred to the second column in a single run and, therefore, the time consumption, have led to the evaluation of GC x GC as an alternative for this type of analysis. With GC x GC, two column set-ups were tested, both having a chiral column as first-dimension column, and two different polar stationary phase columns in the second dimension. On using both column combinations, congeners 84, 91, 95, 132, 135, 136, 149, 174, and 176 could be determined free from coelutions with other PCBs. Results on the application of heart-cut MDGC to food samples such as milk and cheese are given, as well as the first results on the application of GC x GC to this type of samples.     

Unravelling the composition of very complex samples by comprehensive gas chromatography coupled to time-of-flight mass spectrometry. Cigarette smoke

The potential and current limitations of comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry (GC x GC-TOF-MS) for the analysis of very complex samples were studied with the separation of cigarette smoke as an example. Because of the large number of peaks in such a GC x GC chromatogram it was not possible to perform manual data processing. Instead, the GC-TOF-MS software was used to perform peak finding, deconvolution and library search in an automated fashion; this resulted in a peak table containing some 30000 peaks. Mass spectral match factors were used to evaluate the library search results. The additional use of retention indices and information from second-dimension retention times can substantially improve the identification. The combined separation power of the GC x GC-TOF-MS system and the deconvolution algorithm provide a system with a most impressive separation power.     

Comprehensive two-dimensional gas chromatography, retention indices and time-of-flight mass spectra of flavonoids and chalcones

The applicability of comprehensive two-dimensional gas chromatography (GC×GC) for flavonoids analysis was investigated by separation and identification of flavonoids in standards, and a complex matrix natural sample. The modulation temperature was optimized to achieve the best separation and signal enhancement. The separation pattern of trimethylsilyl (TMS) derivatives of flavonoids was compared on two complementary column sets. Whilst the BPX5/BPX50 (NP/P) column set offers better overall separation, BPX50/BPX5 (P/NP) provides better peak shape and sensitivity. Comparison of the identification power of GC×GC-TOFMS against both the NIST05 MS library and a laboratory (created in-house) TOFMS library was carried out on a flavonoid mixture. The basic retention index information on high-performance capillary columns with a non-polar stationary phase was established and database of mass spectra of trimethylsilyl derivatives of flavonoids was compiled. TOFMS coupled to GC×GC enabled satisfactory identification of flavonoids in complex matrix samples at their LOD over a range of 0.5-10 μg/mL. Detection of all compounds was based on full-scan mass spectra and for each compound a characteristic ion was chosen for further quantification. This study shows that GC×GC-TOFMS yields high specificity for flavonoids derived from real natural samples, dark chocolate, propolis, and chrysanthemum.     

Gas chromatographic retention of 180 polybrominated diphenyl ethers and prediction of relative retention under various operational conditions

The gas chromatographic (GC) retention times of 180 polybrominated diphenyl ethers (PBDEs) were obtained under different operational conditions on two types of commonly used capillary columns, Restek Rtx-1614 and J&W DB-5MS, of different dimensions. The relative retention times (RRTs) for PBDEs were calculated by normalizing the retention times of individual congeners to the sum of those of BDEs 47 and 183. In clear contrast to polychlorinated biphenyls (PCBs), the elution of PBDEs has few cross-homolog overlaps, and this observation is discussed in terms of molecular conformation with regard to co-planarity. Within a homolog, ortho substitution in PBDEs tends to decrease GC retention, and such an effect is stronger for higher homologs. With the RRT database established in this work, a simple approach is evaluated for the identification of all mono to hepta PBDEs from the RRTs of 39 congeners under various GC conditions to facilitate the identification of unknown PBDE peaks for which chemical standards are not available.     

Characterisation of lavender essential oils by using gas chromatography-mass spectrometry with correlation of linear retention indices and comparison with comprehensive two-dimensional gas chromatography

Nine samples of lavender essential oil were analysed by GC–MS using low-polarity and polar capillary columns. Linear retention indices (LRI) were calculated for each component detected. Characterisation of the individual components making up the oils was performed with the use of an mass spectrometry (MS) library developed in-house. The MS library was designed to incorporate the chromatographic data in the form of linear retention indices. The MS search routine used linear retention indices as a post-search filter and identification of the “unknowns” was made more reliable as this approach provided two independent parameters on which the identification was based. Around 70% of the total number of components in each sample were reliably characterised. A total of 85 components were identified. Semi-quantitative analysis of the same nine samples was performed by gas chromatography (GC) with flame ionisation detection (FID). The identified components accounted for more than 95% of each oil. By comparing the GC–MS results with the results from the GC×GC–FID analysis of a lavender essential oil, many more components could be found within the two-dimensional separation space.     

Comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometric detection for the trace analysis of flavour compounds in food

The practicability and potential of comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry (GC x GC-TOF-MS) for the analysis of complex flavour mixtures in food were studied. With the determination of key flavour targets in dairy samples as an example, it was demonstrated that GC x GC dramatically improves the separation. As a consequence, identification and, more importantly, quantification down to the ng/g level can be performed more reliably: background interferences largely disappear. Next to the peak table generated from the GC-TOF-MS software after data processing, the additional use of well-ordered patterns in the 2D-plane and information from second-dimension retention times can substantially help the identification of unknowns. The technique was successfully used for an evaluation of extraction techniques and the characterisation of different types of samples.     

Retention indices in comprehensive two-dimensional gas chromatography

The identification of compounds by using gas chromatography (GC) in samples with significant complexity comprising a range of isomeric species, where characterization is based on peak retention times and mass spectra, generates uncertainty for the analyst. This leads to identification errors. The most reliable way to confirm the identification of each compound is based on authentic standard co-injection, which in several cases is economically prohibitive, and often unachievable in the time available for analysis. Retention index procedures are important tools to minimize misidentification of compounds in conventional chromatography. The introduction of comprehensive two-dimensional GC (GC × GC) for analysis of complex samples was a decisive step to increase the analytical capacity of chromatographic techniques. For many samples, the chromatographic resolution increase leads to quantitative expansion in the number of peaks identified, compared with conventional GC analysis. Notwithstanding this improved resolution, limitations still persist in correct peak identification, which suggests the use of retention indices may assist in supporting component identification in this important technique. In this work, approaches to use of the retention index in GC × GC are discussed, based on an evaluation of the literature in this area. Interpretation of effective chain length data for fatty acid methyl esters in the first and second dimensions is presented.     

Correct identification of polychlorinated biphenyls in temperature-programmed GC with ECD detection

A method has been developed for peak identification of PCBs in GC with ECD detection under different temperature programs and isothermal conditions on two commonly used columns (DB-5 and DB-1701). This was achieved by means of accurate calibration of retention times based on the concept of the relative retention index P (i) and retention times of the selected PCB internal standards. The P (i) was calculated from the predicted retention times with the database of the retention parameters (A, B) and the migration equations. Through comparison of the calibrated and experimental retention times of PCBs in technical samples, it was shown that the developed method was effective for correct PCB comprehensive, quantitative, congener-specific (CQCS) analyses.     

Effect of first-dimension column film thickness on comprehensive two-dimensional gas chromatographic separation

In comprehensive two-dimensional gas chromatography (GC x GC), samples experience two-dimensional separation implemented by a modulator which helps preserve the first-dimension separation and facilitates the second-dimension separation by periodically collecting, focusing and launching the material from the primary column onto the secondary column with a different stationary phase. Column overloading in GC x GC is a considerable problem, aggravated by the fact that two columns are involved. Broad first-dimension peaks of an analyte help produce smaller fractions of the analyte in the second-dimension, reducing the chance of secondary column overloading. One of the means to generate broad peaks in the first-dimension is to use thick film primary columns. A series of primary columns of various film thickness were tested in the study, and the results indicate that when other conditions are kept constant, 1 microm film columns often provide better resolution in both first and second-dimension but at the expense of a much longer separation time; 0.1 microm is clearly inadequate for GC x GC separation; 0.5 and 0.25 microm film columns seem to be the best compromises.     

Overloading of the second-dimension column in comprehensive two-dimensional gas chromatography

Comprehensive two-dimensional gas chromatography (GC x GC) is based on a coupling of two GC columns of different characteristics by means of a device that allows portions of the effluent from the primary column to be injected onto the second dimension column for an additional separation. The time available for the separation in the second-dimension column is very short. Thus, this separation should be very efficient. The vast majority of GC x GC practitioners use very narrow bore columns for the second dimension. While this approach is justified in principle, if peaks in the second dimension overload this column, its peak capacity is severely reduced. A series of second-dimension columns of varying internal diameters, but similar phase ratios, were used to study these effects. The results indicate that 250 microm columns often provide comparable second dimension peak widths to 100 microm columns, while at the same time being less prone to overloading, indicating that they may often be a better choice than smaller diameter columns in the second dimension of GC x GC systems.     

Multivariate selectivity as a metric for evaluating comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry subjected to chemometric peak deconvolution

Two-dimensional gas chromatography (GC x GC) coupled to time-of-flight mass spectrometry (TOFMS) [GC x GC-TOFMS)] is a highly selective technique well suited to analyzing complex mixtures. The data generated is information-rich, making it applicable to multivariate quantitative analysis and pattern recognition. One separation on a GC x GC-TOFMS provides retention times on two chromatographic columns and a complete mass spectrum for each component within the mixture. In this report, we demonstrate how GC x GC-TOFMS combined with trilinear chemometric techniques, specifically parallel factor analysis (PARAFAC) initiated by trilinear decomposition (TLD), results in a powerful analytical methodology for multivariate deconvolution. Using PARAFAC, partially resolved components in complex mixtures can be deconvoluted and identified without requiring a standard data set, signal shape assumptions or any fully selective mass signals. A set of four isomers (iso-butyl, sec-butyl, tert-butyl, and n-butyl benzenes) is used to investigate the practical limitations of PARAFAC for the deconvolution of isomers at varying degrees of chromatographic resolution and mass spectral selectivity. In this report, multivariate selectivity was tested as a metric for evaluating GC x GC-TOFMS data that is subjected to PARAFAC peak deconvolution. It was found that deconvolution results were best with multivariate selectivities over 0.18. Furthermore, the application of GC x GC-TOFMS followed by TLD/PARAFAC is demonstrated for a plant metabolite sample. A region of GC x GC-TOFMS data from a complex natural sample of a derivatized metabolic plant extract from Huilmo (Sisyrinchium striatum) was analyzed using TLD/PARAFAC, demonstrating the utility of this analytical technique on a natural sample containing overlapped analytes without selective ions or peak shape assumptions.     

Analysis of polycyclic aromatic compounds in the fly ash of an incineration plant for radioactive waste

Organic compounds adsorbed on fly ash from an incinerator for radioactive waste were investigated. Following Soxhlet extraction and concentration, analysis was performed by GC and GC/MS using high temperature silylated glass capillary columns coated with OV-1 and SE-54. Compound identification was based on retention data, relative detector responses, and mass spectra. Among other polycyclic aromatic compounds, series of gradually chlorinated PAHs containing four to seven aromatic rings were detected. For unequivocal identification, appropriate reference compounds were synthesized by chlorination of the corresponding parent PAHs.     

Novel gas chromatography-mass spectrometry database for automatic identification and quantification of micropollutants

A novel gas chromatography-mass spectroscopy (GC-MS) database for identification and quantification of micropollutants in environmental and food samples is reported. GC retention times, calibration curves, and mass spectra of nearly 700 chemicals were registered in the database, and the GC retention times of registered chemicals in actual samples were predicted from the retention times of n-alkanes measured before sample analysis. Differences between predicted and actual retention times were less than 3 s, an accuracy that is nearly identical to that obtained by analysis of standard substances. After the retention times were predicted, a calibration file for the GC-MS instrument was created from the predicted retention times, calibration curves, and mass spectra of the registered chemicals. With the resulting calibration file, automated identification of all the chemicals in actual samples was possible without the use of standards, and the identification method was as reliable as conventional methods. When the GC inlet, column, and tuning conditions were adjusted using GC-MS performance check standards, relative standard deviations of 20% or less for determination values could be obtained. More than 90% of the chemicals in the database could be detected at a sensitivity sufficient for all practical purposes (100 pg or less). Because each chemical in the database, to which new substances can easily be added, can be determined in 1 h, micropollutants in samples can be analyzed efficiently and inexpensively.     

Temperature effects on separation on zirconia columns: applications to one- and two-dimensional LC separations of phenolic antioxidants

The effects of temperature and mobile phase on LC chromatographic separation of phenolic antioxidants on zirconia-based columns were investigated. Unlike silica-based materials, zirconia columns show excellent thermal stability over a wide range of temperatures and enable high-temperature separations. Enthalpic and entropic contributions to the retention of phenolic compounds on ZR-Carbon and ZR-Carbon C18 columns were determined from retention versus temperature plots in order to elucidate the retention mechanism of sample compounds over the temperature range up to 14 degrees C. High-temperature liquid chromatography on ZR-Carbon columns was used for comprehensive LC x LC two-dimensional separation systems based on the different selectivity of a Zorbax SB micro-column used in the first dimension and a ZR-Carbon column used in the second dimension. Two-dimensional LC x LC systems employing a setup with two alternately operated parallel ZR-Carbon columns in the second dimension were used for the analysis of phenolic antioxidants in beer and wine samples.     

Molecular interconversion behaviour in comprehensive two-dimensional gas chromatography

Comprehensive two-dimensional gas chromatography (GC x GC) is shown to provide information on dynamic molecular behaviour (interconversion), with the interconversion process occurring on both columns in the coupled-column experiment. The experiment requires suitable adjustment of both experimental conditions and relative dimensions of each of the columns. In this case, a longer column than normally employed in GC x GC allows sufficient retention duration on the second column, which permits the typical plateau-shape recognised for the interconversion process to be observed. The extent of interconversion depends on prevailing temperature, retention time, and the phase type. Polyethylene glycol-based phases were found to result in high interconversion kinetics, although terephthalic acid-terminated polyethylene glycol had a lesser extent of interconversion. Much less interconversion was seen for phenyl-methylpolysiloxane and cyclodextrin phases. This suggests that for the oximes, interconversion largely occurs in the stationary phase. Examples of different extents of interconversion in both dimensions are shown, including peak coalescence on the first column with little interconversion on the second column.