Spectroscopic Observation of the Hydroxy Position in Butanol Hydrates and Its Effect on Hydrate Stability

In this study, we investigate the crystal structures and phase equilibria of butanols+CH₄+H₂O systems to reveal the hydroxy group positioning and its effects on hydrate stability. Four clathrate hydrates formed by structural butanol isomers are identified with powder X‐ray diffraction (PXRD). In addition, Raman spectroscopy is used to analyze the guest distributions and inclusion behaviors of large alcohol molecules in these hydrate systems. The existence of a free OH indicates that guest molecules can be captured in the large cages of structure II hydrates without any hydrogen‐bonding interactions between the hydroxy group of the guests and the water‐host framework. However, Raman spectra of the binary (1‐butanol+CH₄) hydrate do not show the free OH signal, indicating that there could be possible hydrogen‐bonding interactions between the guests and hosts. We also measure the four‐phase equilibrium conditions of the butanols+CH₄+H₂O systems.     

A New Silicate Clathrate Hydrate: An X-Ray Diffraction and Nuclear Magnetic Resonance Study of a System with Octameric Silicate Anions and Trivalent Cations

The first crystal structure is reported for a silicate clathrate hydrate involving a triply charged cation [C₁₈H₃₀N₃]³⁺ and an octameric cubic silicate cage. The structure is essentially a host/guest system, with the silicate cages linked into a framework by hydrogen bonding to water molecules. The space group is P with Z = 2, and the asymmetric unit includes a complete cation and half the anion, plus 21 water molecules (4 of which are in disordered positions). Solid-state (CPMAS) ²⁹Si and ¹³CNMR spectra are consistent with the diffraction-determined structure and indicate substantial distortion of the anion from cubic symmetry. Solution-state spectra of precursor solutions and of melted material are also presented and discussed.     

Temperature- and Pressure-induced Structural Transition of Binary Clathrate Hydrates

We discover new structure II (sII) hydrate forming agents of two C₄H₈O molecules (2-methyl-2-propen-1-ol and 2-butanone) and report the abnormal structural transition of binary C₄H₈O+CH₄ hydrates between structure I (sI) and sII with varying temperature and pressure conditions. In both (2-methyl-2-propen-1-ol+CH₄) and (2-butanone+CH₄) systems, the phase boundary of the two different hydrate phases (sI and sII) exists at the slope change of the phase-equilibrium curve in the semi-logarithmic plots. We confirm the crystal structures of two hydrates synthesized at low (278 K and 6 MPa) and high (286 K and 15 MPa) temperature and pressure conditions by using high-resolution powder diffraction and Raman spectroscopy. 2-Methyl-2-propen-1-ol and 2-butanone can occupy the large cages of sII hydrate at low temperature and pressure conditions; however, they are excluded from the hydrate phase at high temperature and pressure conditions, resulting in the formation of pure sI CH₄ hydrate.     

Heat capacity and transition phenomena of structure I and II trimethylene oxide clathrate hydrates

Heat capacities of structure I and II trimethylene oxide (TMO) clathrate hydrates doped with small amount of potassium hydroxide (x=1.8×10^–4 to water) were measured by an adiabatic calorimeter in the temperature range 11–300 K. In the str. I hydrate (TMO·7.67H₂O), a glass transition and a higher order phase transition were observed at 60 K and 107.9 K, respectively. The glass transition was considered to be due to the freezing of the reorientation of the host water molecules, which occurred around 85 K in the pure sample and was lowered owing to the acceleration effect of KOH. The relaxation time of the water reorientation and its distribution were estimated and compared with those of other clathrate hydrates. The phase transition was due to the orientational ordering of the guest TMO molecules accommodated in the cages formed by water molecules. The transition was of the higher order and the transition entropy was 1.88 J·K^–1(TMO-mol)^–1, which indicated that at least 75% of orientational disorder was remaining in the low temperature phase. In the str. II hydrates (TMO·17H₂O), only one first-order phase transition appeared at 34.5 K. This transition was considered to be related to the orientational ordering of the water molecules as in the case of the KOH-doped acetone and tetrahydrofuran (THF) hydrates. The transition entropy was 2.36 JK^–1(H₂O-mol)^–1, which is similar to those observed in the acetone and THF hydrates. The relations of the transition temperature and entropy to the guest properties (size and dipole moment) were discussed.Contribution No 57 from the Microcalorimetry Research CenterThe authors would like to express their sincere thanks to the Nissan Science Foundation for their financial support.     

Hydrogen in Porous Tetrahydrofuran Clathrate Hydrate

The lack of practical methods for hydrogen storage is still a major bottleneck in the realization of an energy economy based on hydrogen as energy carrier. ¹ Storage within solid‐state clathrate hydrates, ² – ⁴ and in the clathrate hydrate of tetrahydrofuran (THF), has been recently reported. ⁵ , ⁶ In the latter case, stabilization by THF is claimed to reduce the operation pressure by several orders of magnitude close to room temperature. Here, we apply in situ neutron diffraction to show that—in contrast to previous reports^{[5, 6]}—hydrogen (deuterium) occupies the small cages of the clathrate hydrate only to 30 % (at 274 K and 90.5 bar). Such a D₂ load is equivalent to 0.27 wt. % of stored H₂. In addition, we show that a surplus of D₂O results in the formation of additional D₂O ice Ih instead of in the production of sub‐stoichiometric clathrate that is stabilized by loaded hydrogen (as was reported in ref. ⁶ ). Structure‐refinement studies show that [D₈]THF is dynamically disordered, while it fills each of the large cages of [D₈]THF?17D₂O stoichiometrically. Our results show that the clathrate hydrate takes up hydrogen rapidly at pressures between 60 and 90 bar (at about 270 K). At temperatures above ≈220 K, the H‐storage characteristics of the clathrate hydrate have similarities with those of surface‐adsorption materials, such as nanoporous zeolites and metal–organic frameworks, ⁷ , ⁸ but at lower temperatures, the adsorption rates slow down because of reduced D₂ diffusion between the small cages.     

Distribution of Butane in the Host Water Cage of Structure II Clathrate Hydrates

To understand host–guest interactions of hydrocarbon clathrate hydrates, we investigated the crystal structure of simple and binary clathrate hydrates including butane (n‐C₄H₁₀ or iso‐C₄H₁₀) as the guest. Powder X‐ray diffraction (PXRD) analysis using the information on the conformation of C₄H₁₀ molecules obtained by molecular dynamics (MD) simulations was performed. It was shown that the guest n‐C₄H₁₀ molecule tends to change to the gauche conformation within host water cages. Any distortion of the large 5¹²6⁴ cage and empty 5¹² cage for the simple iso‐C₄H₁₀ hydrate was not detected, and it was revealed that dynamic disorder of iso‐C₄H₁₀ and gauche‐nC₄H₁₀ were spherically extended within the large 5¹²6⁴ cages. It was indicated that structural isomers of hydrocarbon molecules with different van der Waals diameters are enclathrated within water cages in the same way owing to conformational change and dynamic disorder of the molecules. Furthermore, these results show that the method reported herein is applicable to structure analysis of other host–guest materials including guest molecules that could change molecular conformations.     

Structural links between zeolite-type and clathrate hydrate-type materials: Synthesis and crystal Structure of [N(CH3)4]6[AlxSi8−xO18−x(OH)2+x] · 44H2O (x = 3–4)

A novel tetramethylammonium aluminosilicate hydrate with the approximate composition [NMe₄]₆[Al_xSi_8?xO_18?x(OH)_2+x] · 44H₂O (x = 3–4) has been identified by powder X-ray diffraction as a component in a polyphasic solid mixture which crystallized at room temperature from an aqueous NMe₄OH? Al₂O₃? SiO₂ solution. Large crystals of the novel hydrate phase could be mechanically selected from that mixture. The crystal structure has been determined from 1 196 unique MoKα diffraction data measured at 180 K: Tetragonal crystal system, cell constants a = 16.181(4) and c = 17.450(4) Å, space group P4/mnc with Z = 2 formula units per unit cell, R = 0.072. The host-guest compound is of polyhedral clathrate type with a mixed three-dimensional, (mainly) four-connected network composed of oligomeric aluminosilicate anions [Al_xSi_8?xO_18?x(OH)_2+x]^6? and H₂O molecules linked via hydrogen bonds O? H …? O. The aluminosilicate anions possess a cube-shaped (double four-ring) structure. Orientationally disordered cationic guest species NMe₄⁺ are enclosed in the large [4⁶6⁸] and [4¹5¹⁰6⁷] polyhedral voids of the host framework; the small [4⁶] cages (i.e. the double four-ring anions) and [4³5⁶] cages are empty. The hydrate is a further member in a recently discovered series of clathrates with mixed tetrahedral networks, which provides a structure-chemical link between zeolite- and clathrate hydrate-type host-guest compounds.     

Determination of NMR Lineshape Anisotropy of Guest Molecules within Inclusion Complexes from Molecular Dynamics Simulations

Nonspherical cages in inclusion compounds can result in non‐uniform motion of guest species in these cages and anisotropic lineshapes in NMR spectra of the guest. Herein, we develop a methodology to calculate lineshape anisotropy of guest species in cages based on molecular dynamics simulations of the inclusion compound. The methodology is valid for guest atoms with spin 1/2 nuclei and does not depend on the temperature and type of inclusion compound or guest species studied. As an example, the nonspherical shape of the structure I (sI) clathrate hydrate large cages leads to preferential alignment of linear CO₂ molecules in directions parallel to the two hexagonal faces of the cages. The angular distribution of the CO₂ guests in terms of a polar angle θ and azimuth angle ? and small amplitude vibrational motions in the large cage are characterized by molecular dynamics simulations at different temperatures in the stability range of the CO₂ sI clathrate. The experimental ¹³C NMR lineshapes of CO₂ guests in the large cages show a reversal of the skew between the low temperature (77 K) and the high temperature (238 K) limits of the stability of the clathrate. We determine the angular distributions of the guests in the cages by classical MD simulations of the sI clathrate and calculate the ¹³C NMR lineshapes over a range of temperatures. Good agreement between experimental lineshapes and calculated lineshapes is obtained. No assumptions regarding the nature of the guest motions in the cages are required.     

Effect of Guest–Host Hydrogen Bonding on the Structures and Properties of Clathrate Hydrates

To provide improved understanding of guest–host interactions in clathrate hydrates, we present some correlations between guest chemical structures and observations on the corresponding hydrate properties. From these correlations it is clear that directional interactions such as hydrogen bonding between guest and host are likely, although these have been ignored to greater or lesser degrees because there has been no direct structural evidence for such interactions. For the first time, single‐crystal X‐ray crystallography has been used to detect guest–host hydrogen bonding in structure II (sII) and structure H (sH) clathrate hydrates. The clathrates studied are the tert‐butylamine (tBA) sII clathrate with H₂S/Xe help gases and the pinacolone + H₂S binary sH clathrate. X‐ray structural analysis shows that the tBA nitrogen atom lies at a distance of 2.64 Å from the closest clathrate hydrate water oxygen atom, whereas the pinacolone oxygen atom is determined to lie at a distance of 2.96 Å from the closest water oxygen atom. These distances are compatible with guest–water hydrogen bonding. Results of molecular dynamics simulations on these systems are consistent with the X‐ray crystallographic observations. The tBA guest shows long‐lived guest–host hydrogen bonding with the nitrogen atom tethered to a water HO group that rotates towards the cage center to face the guest nitrogen atom. Pinacolone forms thermally activated guest–host hydrogen bonds with the lattice water molecules; these have been studied for temperatures in the range of 100–250 K. Guest–host hydrogen bonding leads to the formation of Bjerrum L‐defects in the clathrate water lattice between two adjacent water molecules, and these are implicated in the stabilities of the hydrate lattices, the water dynamics, and the dielectric properties. The reported stable hydrogen‐bonded guest–host structures also tend to blur the longstanding distinction between true clathrates and semiclathrates.     

Phase Transitions,Prominent Dielectric Anomalies,and Negative Thermal Expansion in Three High Thermally Stable Ammonium Magnesium–Formate Frameworks

We present three Mg–formate frameworks, incorporating three different ammoniums: [NH₄][Mg(HCOO)₃] ( 1 ), [CH₃CH₂NH₃][Mg(HCOO)₃] ( 2 ) and [NH₃(CH₂)₄NH₃][Mg₂(HCOO)₆] ( 3 ). They display structural phase transitions accompanied by prominent dielectric anomalies and anisotropic and negative thermal expansion. The temperature‐dependent structures, covering the whole temperature region in which the phase transitions occur, reveal detailed structural changes, and structure–property relationships are established. Compound 1 is a chiral Mg–formate framework with the NH₄⁺ cations located in the channels. Above 255 K, the NH₄⁺ cation vibrates quickly between two positions of shallow energy minima. Below 255 K, the cations undergo two steps of freezing of their vibrations, caused by the different inner profiles of the channels, producing non‐compensated antipolarization. These lead to significant negative thermal expansion and a relaxor‐like dielectric response. In perovskite 2 , the orthorhombic phase below 374 K possesses ordered CH₃CH₂NH₃⁺ cations in the cubic cavities of the Mg–formate framework. Above 374 K, the structure becomes trigonal, with trigonally disordered cations, and above 426 K, another phase transition occurs and the cation changes to a two‐fold disordered state. The two transitions are accompanied by prominent dielectric anomalies and negative and positive thermal expansion, contributing to the large regulation of the framework coupled the order–disorder transition of CH₃CH₂NH₃⁺. For niccolite 3 , the gradually enhanced flipping movement of the middle ethylene of [NH₃(CH₂)₄NH₃]²⁺ in the elongated framework cavity finally leads to the phase transition with a critical temperature of 412 K, and the trigonally disordered cations and relevant framework change, providing the basis for the very strong dielectric dispersion, high dielectric constant (comparable to inorganic oxides), and large negative thermal expansion. The spontaneous polarizations for the low‐temperature polar phases are 1.15, 3.43 and 1.51 μC cm^?2 for 1 , 2 and 3 , respectively, as estimated by the shifts of the cations related to the anionic frameworks. Thermal and variable‐temperature powder X‐ray diffraction studies confirm the phase transitions, and the materials are all found to be thermally stable up to 470 K.     

Computational Study on the Antifreeze Glycoproteins as Inhibitors of Clathrate‐Hydrate Formation

The ability of antifreeze glycoproteins to inhibit clathrate‐hydrate formation is studied using DFT. A 5¹² cavity, dodecahedral (H₂O)₂₀, and the AATA peptide are used to model the inhibitor–clathrate interaction. The presence of AATA in the vicinity of the water cavities not only leads to the formation of complexes, with different peptide/cavity ratios, but also to the deformation of the cavity and to the elongation of several of the hydrogen bonds responsible for keeping the dodecahedral (H₂O)₂₀ together. The complexes are formed through hydrogen bonding between the peptides and the water cavities. The glycoproteins are expected to anchor onto the clathrate surface, blocking the access of new water molecules and preventing the incipient crystals from growing. They are also expected to weaken the clathrate structure. Amide IR bands are associated with the complexes’ formation. They are significantly red‐shifted in the hydrogen‐bonded systems compared to isolated AATA. The amide A band is the most sensitive to hydrogen bonding. In addition a distinctive band around 3100 cm^?1 is proposed for the identification of clathrate–peptide hydrogen‐bonded complexes.     

Calorimetric study on pure and KOH-doped argon clathrate hydrates

Pure and KOH (x=1.3×10^?3)-doped argon clathrate hydrates were synthesized in an adiabatic high-pressure calorimetric cell from one mole of water and 200 MPa of Ar gas. The heat capacities of the hydrates were measured from 12 to 130 K. No anomaly was found in the pure sample but a glass transition considered to be related to a proton-configurational mode of the host hydrogen-bonded lattice was observed for the first time at 55 K in the doped sample. Comparison with the results on pure and KOH-doped tetrahydrofuran clathrate hydrates indicated that the thermodynamic properties of a hydrogen-bonded system depend on the kind of guest molecule. The heat capacity of argon in the hydrate cages was adequately analyzed with the one-dimensional Pöschl-Teller potential as used in the Ar-β-quinol clathrate and the addivity of heat capacities of the guest and host was shown to be valid in the temperature range 12–130 K.     

The Cubic Superstructure-I of Tetrabutylammonium Fluoride (C4H9)4NF·29.7H2O Clathrate Hydrate

The crystal structure of (C₄H₉)₄NF·29.7H₂O clathrate hydrate (ionic clathrate) determined by X-Ray analysis is reported. The structure is cubic, I $\overline 4 3dThe crystal structure of (C₄H₉)₄NF·29.7H₂O clathrate hydrate (ionic clathrate) determined by X-Ray analysis is reported. The structure is cubic, I , a = 24.375(3) ? (150 K). Its idealized water framework is analogous to that of cubic structure-I of gas hydrates but with eight-fold unit cell, that is a superstructure of cubic structure-I. This is the last structure found in the binary system (C₄H₉)₄NF–H₂O which was not characterized by X-ray analysis earlier. The structure features of the compound under investigation and others existing in H₂O–(C₄H₉)₄NF binary system are discussed.     

Switchable Guest Molecular Dynamics in a Perovskite‐Like Coordination Polymer toward Sensitive Thermoresponsive Dielectric Materials

A new perovskite‐like coordination polymer [(CH₃)₂NH₂][Cd(N₃)₃] is reported which undergoes a reversible ferroelastic phase transition. This transition is due to varied modes of motion of the [(CH₃)₂NH₂]⁺ guest accompanied by a synergistic deformation of the [Cd(N₃)₃]^? framework. The unusual two‐staged switchable dielectric relaxation reveals the molecular dynamics of the polar cation guest, which are well controlled by the variable confined space of the host framework. As the material switches from the ferroelastic phase to the paraelastic phase, a remarkable increase of the rotational energy barrier is detected. As a result, upon heating at low temperature, this compound shows a notable change from a low to a high dielectric state in the ferroelastic phase. This thermoresponsive host–guest system may serve as a model compound for the development of sensitive thermoresponsive dielectric materials and may be key to understanding and modulating molecular/ionic dynamics of guest molecules in confined space.     

Phase equilibrium measurements and the tuning behavior of new sII clathrate hydrates

We suggest two types of new amine-type sII formers: pyrrolidine and piperidine. These guest compounds fail to form clathrate hydrate structures with host water, but instead have to combine with light gaseous guest molecules (methane) for enclathration. First, two binary clathrate hydrates of (pyrrolidine + methane) and (piperidine + methane) were synthesized at various amine concentrations. ¹³C NMR and Raman analysis were done to identify the clathrate hydrate structure and guest distribution over sII-S and sII-L cages. XRD was also used to find the exact structure and corresponding cell parameters. At a dilute pyrrolidine concentration of less than 5.56 mol%, the tuning phenomenon is observed such that methane molecules surprisingly occupy sII-L cages. At the critical guest concentration of about 0.1 mol%, the cage occupancy ratio reaches the maximum of approximately 0.5. At very dilute guest concentration below 0.1 mol%, the methane molecules fail to occupy large cages on account of their rarefied distribution in the network. Direct-release experiments were performed to determine the actual guest compositions in the clathrate hydrate phases. Finally, we measured the clathrate hydrate phase equilibria of (pyrrolidine + methane) and (piperidine + methane).     

Alcohol‐Vapor Inclusion in Single‐Crystal Adsorbents [MII2(bza)4(pyz)]n (M=Rh,Cu): Structural Study and Application to Separation Membranes

The vapor absorbency of the series of alcohols methanol, ethanol, 1‐propanol, 1‐butanol, and 1‐pentanol was characterized on the single‐crystal adsorbents [M^II₂(bza)₄(pyz)]_n (bza=benzoate, pyz=pyrazine, M=Rh ( 1 ), Cu ( 2 )). The crystal structures of all the alcohol inclusions were determined by single‐crystal X‐ray crystallography at 90 K. The crystal‐phase transition induced by guest adsorption occurred in the inclusion crystals except for 1‐propanol. A hydrogen‐bonded dimer of adsorbed alcohol was found in the methanol‐ and ethanol‐inclusion crystals, which is similar to a previous observation in 2 ?2EtOH (S. Takamizawa, T. Saito, T. Akatsuka, E. Nakata, Inorg. Chem. 2005 , 44, 1421–1424). In contrast, an isolated monomer was present in the channel for 1‐propanol, 1‐butanol, and 1‐pentanol inclusions. All adsorbed alcohols were stabilized by hydrophilic and/or hydrophobic interactions between host and guest. From the combined results of microscopic determination (crystal structure) and macroscopic observation (gas‐adsorption property), the observed transition induced by gas adsorption is explained by stepwise inclusion into the individual cavities, which is called the “step‐loading effect.” Alcohol/water separation was attempted by a pervaporation technique with microcrystals of 2 dispersed in a poly(dimethylsiloxane) membrane. In the alcohol/water separation, the membrane showed effective separation ability and gave separation factors (alcohol/water) of 5.6 and 4.7 for methanol and ethanol at room temperature, respectively.     

Heat capacity and glass transition of ethylene oxide clathrate hydrate

The heat capacity of structure I ethylene oxide clathrate hydrate EO-6.86 H₂O was measured in the temperature range 6–300 K with an adiabatic calorimeter. The temperature and enthalpy of congruent melting were determined to be (284.11 ± 0.02) K and 48.26 kJ mol^–1, respectively. A glass transition related to the proton configurational mode in the hydrogen-bonded host was observed around 90 K. This glass transition was similar to the one observed previously for the structure II tetrahydrofuran hydrate but showed a wider distribution of relaxation times. The anomalous heat capacity and activation enthalpy associated with the glass transition were almost the same as those for THF-hydrate.Dedicated to Dr D. W. Davidson in honor of his great contributions to the sciences of inclusion phenomena.Author for correspondence.     

A molecular dynamics study of ethanol-water hydrogen bonding in binary structure I clathrate hydrate with CO2

Guest-host hydrogen bonding in clathrate hydrates occurs when in addition to the hydrophilic moiety which causes the molecule to form hydrates under high pressure-low temperature conditions, the guests contain a hydrophilic, hydrogen bonding functional group. In the presence of carbon dioxide, ethanol clathrate hydrate has been synthesized with 10% of large structure I (sI) cages occupied by ethanol. In this work, we use molecular dynamics simulations to study hydrogen bonding structure and dynamics in this binary sI clathrate hydrate in the temperature range of 100-250 K. We observe that ethanol forms long-lived (>500 ps) proton-donating and accepting hydrogen bonds with cage water molecules from both hexagonal and pentagonal faces of the large cages while maintaining the general cage integrity of the sI clathrate hydrate. The presence of the nondipolar CO(2) molecules stabilizes the hydrate phase, despite the strong and prevalent alcohol-water hydrogen bonding. The distortions of the large cages from the ideal form, the radial distribution functions of the guest-host interactions, and the ethanol guest dynamics are characterized in this study. In previous work through dielectric and NMR relaxation time studies, single crystal x-ray diffraction, and molecular dynamics simulations we have observed guest-water hydrogen bonding in structure II and structure H clathrate hydrates. The present work extends the observation of hydrogen bonding to structure I hydrates.     

Monoolein cubic phase including in situ ionically gelled alginate and its salt-responsive release property

Salt-responsive monoolein (MO) cubic phase was prepared by in situ ionically gelling alginate contained in its water channels. On the TEM micrographs, bilayers, and water channels, characteristic of MO cubic phase were observed, and alginate and CaCl₂ had little effect on the structure. According to the differential scanning calorimetric thermogram, the cubic-to-hexagonal phase transition temperature of the cubic phase containing CaCl₂ solution was 46.8°C and it was much lower than that of the cubic phase containing distilled water, 60.5°C. The transition temperature was not significantly affected by alginate. The phase transition temperatures measured by the calorimetric analysis were in accordance with those determined by polarized optical microscopy. An initial burst release of dye (i.e., amaranth) was observed when the gelled alginate was not contained in the water channel of the cubic phase. A sustained release was obtained with the cubic phase containing the gelled alginate. The release of dye loaded in the cubic phase containing the gelled alginate was significantly promoted when the cubic phase came into contact with PBS (10?mM, pH 7.4), possibly because the multivalent cation (Ca²⁺) bound to alginate chains could be replaced by the monovalent cation (Na⁺).