Theoretical analysis of the three-dimensional structure of tetrathiolato iron complexes

The three-dimensional structures of a number of [M(SR)(4)](n-) complexes, where M is a 3d transition metal and R is an alkyl or aryl group, have been analyzed using density functional theory (DFT). Special attention is paid to the Fe(II)/Fe(III) mimics of rubredoxin. The Fe(II) model complex [Fe(SCH(3))(4)](2-) has an equilibrium conformation with D2d symmetry. The DFT energy has been decomposed into contributions for ligand-ligand and metal-ligand interactions. The latter contribution is analyzed with the angular overlap model (AOM) and constitutes the dominant stereospecific interaction in the Fe(II) complex. The sulfur lone-pair electrons exert anisotropic pi interactions on the 3d(6) shell of Fe(II), which are controlled by the torsion angles, omega(i), for the rotations of the S(i)-C(beta) bonds around the Fe-S(i) axes. In contrast, the pi interactions acting on the high-spin 3d(5) shell of Fe(III) are isotropic. As a consequence, the stereochemistry of the Fe(III) complexes is determined by the Coulomb repulsions between the ligands and has S(4) symmetry. The electrostatic repulsions between the lone pairs of the sulfurs are an essential component of the ligand-ligand interaction. The lone-pair repulsions distort the 90 degree angle SFeS' angles (delta + delta(t)) and give rise to a correlation between delta and omega, which is confirmed by crystallographic data. Both the Fe(II) and Fe(III) complexes exhibit structural bistability due to the presence of low-lying equilibrium conformations with S(4) symmetry in which the complex can be trapped by the crystalline host.     

Jahn-Teller effect in five-coordinated copper(II) complexes

In spite of the little attention so far paid to the Jahn-Teller (JT) effect in copper(II) complexes in stereochemistries other than the cubic ones, it is shown that strong JT and pseudo-JT interactions are expected at least in square-pyramidal (C_4v symmetry) and trigonal bipyramidal (D_3h symmetry) copper(II) coordination compounds. On the basis of the theoretical results obtained, it is suggested that the interpretation of some experimental data reported in the literature should be reconsidered.     

Interaction of nitric oxide with tetrathiolato iron(II) complexes: relevance to the reaction pathways of iron nitrosyls in sulfur-rich biological coordination environments

The mechanism of formation of dinitrosyl iron complexes (DNICs) coordinated by cysteine residues at iron-sulfur protein sites has received little attention in the chemical literature. As a logical first step toward elucidating this mechanism and characterizing new iron-nitrosyl intermediates, we investigated the interaction of NO (g) and NO+ with iron-sulfur complexes chosen to mimic sulfur-rich iron sites in biology. The reaction of NO (g) with [Fe(StBu)4]2- cleanly affords the mononitrosyl complex, [Fe(StBu)3(NO)]- (1), a previously unknown species evoked in this chemistry. Reaction of [Fe(StBu)4]2- with NO derivatives, such as NO+, yields the corresponding dinitrosyl S-bridged Roussin red ester [Fe2(mu-StBu)2(NO)4] (2). The nitrosyl complexes 1 and 2 can chemically convert to the DNIC, [Fe(StBu)2(NO)2]- (3). The results should aid in the spectroscopic identification and elucidation of reaction pathways for the nitrosylation of iron in biologically related sulfur-rich coordination environments.     

Molecular modelling of Jahn-Teller distortions in Cu(II)N6 complexes: elongations, compressions and the pathways in between

Ligand Field Molecular Mechanics (LFMM) parameters have been optimised for six-coordinate Cu(II) complexes containing amine, pyridine, imidazole and pyrazine donors. As found in previous LFMM applications, the new parameters automatically generate distorted structures with the magnitudes of the Jahn-Teller elongations in good agreement with experiment. Here, we explore the rest of the potential energy surface. The introduction of axial strain drives the LFMM structures via rhombic geometries to the compressed structure, the latter corresponding to the saddle point between successive elongation axes. Calculated barrier heights between compressed and elongated geometries also agree well with available experimental data. In every case bar one, the LFMM predicts that the crystallographically observed elongation axis corresponds to the overall lowest energy well. The structural predictions are confirmed by independent density functional theory (DFT) optimisations. LFMM calculations on bis(2,5-pyrazolylpyridine)copper complexes display a smooth variation in structure as a function of pyrazolyl substituent from elongated for R = H through to fully compressed for R = (t)Bu. This behaviour is driven by the steric interactions with the ground state varying smoothly as a linear combination of {d(x2-y2)}1 and {d(z2)}1.     

Nonplanar distortions of bis-base low-spin iron(II)-porphyrinates: absorption and resonance Raman investigations of cross-trans-linked iron(II)-basket-handle porphyrin complexes

Electronic absorption and Soret-excited resonance Raman (RR) spectra are reported for bis-N-alkylimidazole and bis-pyridine complexes of various cross-trans-linked iron(II)-"basket-handle" porphyrins (Fe(II)-BHP) in methylene chloride. These compounds enable us to characterize the spectroscopic properties of ruffled six-coordinated low-spin Fe(II)-porphyrin complexes. The visible absorption spectra show that the Q and B bands are progressively red-shifted when the handles are shortened and/or when the steric hindrance of the axial ligands is increased. This effect is accompanied by both a decrease in RR frequency of the nu(2) mode and an increase in frequency of the nu(8) and nu(s)(Fe-ligand(2)) modes. More precisely, an inverse linear correlation is found between the frequencies of the nu(2) and nu(8) modes. For each ligation state, the positions of the absorption bands are also linearly correlated with the frequency of the nu(2) or nu(8) mode. All of these spectroscopic data reveal that the degree of ruffling of the Fe(II)-BHP complexes is increased by the N-methylimidazole --> pyridine axial substitutions, presumably because the mutual steric strains between the axial ligand rings, the porphyrin macrocycle and the porphyrin handles are increased. The present study provides a first basis for discerning ruffled conformations from planar and other nonplanar structures in ferrous heme proteins.     

Effect of chelate ring expansion on Jahn-Teller distortion and Jahn-Teller dynamics in copper(II) complexes

The expanded ligand N,N'-dimethyl-N,N'-dipyridin-2-yl-pyridin-2,6-diamine (ddpd) coordinates to copper(II) ions in a meridional fashion giving the dicationic complex mer-[Cu(ddpd)(2)](BF(4))(2) (1). In the solid state at temperatures below 100 K the cations of 1 localize in Jahn-Teller elongated CuN(6) polyhedra with the longest Cu-N bond pointing in the molecular x or y directions while the z axis is constrained by the tridentate ddpd ligand. The elongated polyhedra are ordered in an antiferrodistortive way giving an idealized zincblende structure. At higher temperature dynamically averaged (fluxional) polyhedra in the molecular x/y directions are observed by multifrequency variable temperature electron paramagnetic resonance (EPR) and by variable temperature X-ray diffraction studies. Compared to [Cu(tpy)(2)](2+) (tpy = 2,2';6',2″-terpyridine) the Jahn-Teller splitting 4δ(1) of 1 is larger. This is very probably caused by the much more favorable orbital overlap in the Cu-N bonds in 1 which results from the larger bite angle of ddpd as compared to tpy. The "freezing-in" of the Jahn-Teller dynamics of 1 (T ≈ 100 K) occurs at higher temperature than observed for [Cu(tpy)(2)](2+) (T < 77 K) which is also probably due to the larger Jahn-Teller distortion of 1 resulting in a larger activation barrier.     

Spin transition in iron(III) and iron(II) complexes

The main stages of the studies on the spin transitions in iron(III) and iron(II) complexes are considered. The types of the spin transitions and the factors responsible for the latter are reported. The problems arising during experiments in this field are discussed.     

Tetragonal distortions and vibronic coupling in hexaflouro nickel(II) and copper (II) complexes

Two parameters, axial (R_a) and equatorial (R_e) metal-ligand distances, describe the tetragonal distortions of the NiF^4?₆ and CuF^4?₆ complexes under study. The experimental values of R_a plotted vs R_e exhibit a smooth curve type dependence valid for MF₆ chromophore of solid state compounds. In the model study it becomes explained by analyzing the shape of the adiabatic potential surface (APS) of the form of E_T(R_a, R_e). Around the energy minima the map of numerical values (obtained by the quantum-chemical CNDOUHF and INDOUHF methods) was transformed to an analytic form from which the quantitative characteristics of APS were obtained in a new, simple way. The set of equatorial-axial parameters as well as the set of vibronic parameters were evaluated and discussed in more detail.     

Alkyl isomerisation in three-coordinate iron(II) complexes

The tertiary to iso-butyl isomerisation of three-coordinate iron(II) diketiminate complexes is reported and a hydride intermediate is proposed on the basis of exchange experiments.     

Solid complexes of iron(II) and iron(III) with rutin

Solid complex compounds of Fe(II) and Fe(III) ions with rutin were obtained. On the basis of the elementary analysis and thermogravimetric investigation, the following composition of the compounds was determined: (1) FeOH(C₂₇H₂₉O₁₆)·5H₂O, (2) Fe₂OH(C₂₇H₂₇O₁₆)·9H₂O, (3) Fe(OH)₂(C₂₇H₂₉O₁₆)·8H₂O, (4) [Fe₆(OH)₂(4H₂O)(C₁₅H₇O₁₂)SO₄]·10H₂O. The coordination site in a rutin molecule was established on the basis of spectroscopic data (UV–Vis and IR). It was supposed that rutin was bound to the iron ions via 4C=O and 5C—oxygen in the case of (1) and (3). Groups 5C–OH and 4C=O as well as 3′C–OH and 4′C–OH of the ligand participate in binding metals ions in the case of (2). At an excess of iron(III) ions with regard to rutin under the synthesis conditions of (4), a side reaction of ligand oxidation occurs. In this compound, the ligands’ role plays a quinone which arose after rutin oxidation and the substitution of Fe(II) and Fe(III) ions takes place in 4C=O, 5C–OH as well as 4′C–OH, 3′C–OH ligands groups. The magnetic measurements indicated that (1) and (3) are high-spin complexes.     

Structure of iron (II) and cobalt (II) bromide complexes in aqueous solution by X-ray diffraction analysis

Structures of bromo-metal complexes in concentrated aqueous solutions of FeBr₂ and of CoBr₂ were investigated by X-ray diffraction analysis. The complexes possess an octahedral geometry coordinating Br^– along with H₂O ligands. The frequency factors of metal-Br contacts per one atom of metal were 0.325 for the 2.7M (mol-dm^–3) and 0.747 for the 4.5M FeBr₂ solutions, and 0.280 for the 2.8M and 0.595 for the 4.3M CoBr₂ solutions. The frequency factors suggested that the tendency of metal ions to forming monobromo complexes is in the order, Fe>Co>Ni相似文献   

Gaseous iron(II) and iron(III) complexes with BINOLate ligands

Electrospray ionization (ESI) of dilute solutions of 1,1'-bi-2-naphthol (BINOL) and iron(II) or iron(III) sulfate in methanol/water allows the generation of monocationic complexes of iron and deprotonated BINOL ligands with additional methanol molecules in the coordination sphere, and the types of complexes formed can be controlled by the valence of the iron precursors used in ESI. Thus, iron(II) sulfate leads to [(BINOLate)Fe(CH3OH)n]+ complexes (n=0-3), whereas usage of iron(III) sulfate allows the generation of [(BINOLdiate)-Fe(CH3OH)n]+ cations (n=0-2); here, BINOLate and BINOLdiate stand for singly and doubly deprotonated BINOL, respectively. Upon collision-induced dissociation, the mass-selected ions with n>0 first lose the methanol ligands and then undergo characteristic fragmentations. Bare [(BINOLdiate)Fe]+, a formal iron(III) species, undergoes decarbonylation, which is known as a typical fragmentation of ionized phenols and phenolates either as free species or as the corresponding metal complexes. The bare [(BINOLate)Fe]+ cation, on the other hand, preferentially loses neutral FeOH to afford an organic C20H12O+* cation radical, which most likely corresponds to ionized 1,1'-dinaphthofurane.     

Bis- and tris-acetonitrile complexes of iron(II)

The complexes [Os₅H₂(CO)₁₅L] (L = PPh₃, PEt₃, P(OMe)₃) undergo decarbonylation at 120°C to give compounds with the general formula [Os₅H₂(CO)₁₄L], which adopt a trigonal bipyramidal arrangement of metal atoms with the phosphorus donor group bonded to one of the equatorial Os atoms. These clusters will also undergo further substitution to give [Os₅H₂(CO)₁₃LL′] in which the trigonal bipyramidal metal arrangement is retained.     

Stability constants of iron(II) sulfate complexes

The complex formation equilibria between iron(II) and sulfate ions have been studied at 25 degrees C in 3 M NaClO4 ionic medium by measuring with a glass electrode the competition of Fe2+ and H+ ions for the sulfate ion. The concentrations of the metal and of the ligand were varied in the ranges 0.01 to 0.125 and 0.01 to 0.250 M, respectively. The analytical concentration of strong acid was chosen to be 0.01 or 0.03 M. The potentials of the glass electrode, corrected for the effect of replacement of medium ions with reagent species, have been interpreted with the equilibria [formula: see text] Stability constants valid in the infinite dilution reference state, logK zero = 1.98 +/- 0.16, log beta 1 zero = 2.1(5) +/- 0.2 and log beta 2 = 2.5 +/- 0.2, have been estimated by assuming the validity of the specific interaction theory.     

Radiation synthesis of iron(II) and ruthenium(II) alkylnitroso complexes

The radiolysis of deoxygenated aqueous solutions of Ru(NH₃)₅NO³⁺ and Fe(CN)₅NO²⁻ in the presence of organic compounds (RH) generates alkylnitroso complexes of the form Ru(NH₃)₅N(O)R²⁺ and Fe(CN)₅N(O)R³⁻ where RH = tert-butyl alcohol, tert-butyl amine, N,N-dimethylacetamide, α-aminoisobutyric acid, pivalic acid, and α-hydroxyisobutyric acid. The products form from the rapid combination of the β-carbon radical derived from the reaction of the organic compound with OH radicals (OH + RH → R· + H₂O) and the one-electron reduced metal complex formed by interaction with e_aq⁻: Ru(NH₃)₅NO³⁺ + e_aq⁻ → Ru(NH₃)₅NO²⁺; Fe(CN)₅NO²⁻ + e_aq⁻ → Fe(CN)₅NO³⁻. The alkylnitroso complexes are moderately O₂-insensitive but display varying degrees of thermal stability. Stability permitting, these complexes have been characterized by ion-exchange chromatography and UV-vis-IR spectroscopy. The green ruthenium complexes exhibit λ_max 740 and 342 nm (ϵ 22 and 4.5 × 10³ M⁻¹ cm⁻¹, respectively) and ν_NO in the 1365–1405 cm⁻¹ region. The less stable red iron analogues absorb at 475 and ∼ 250 nm (ϵ 5.0 × 10³ and ∼ 9 × 10³ M⁻¹ cm⁻¹, respectively).     

Polarographic determination of iron(II) and iron(III) complexes with edta

The iron(II) and iron(III) complexes with EDTA can be determined separately and in mixtures in acetate-buffered medium at pH 4.0. The E_{$\text{1}\text{2}$}values are in the range ?0.105 to ?0.112 V vs. SCE. Linear calibration plots are obtained over the range 0–1.0 mM for each oxidation state. A sample-handling procedure for avoiding oxidation of iron(II) species is described. It is shown that the acetate buffer system does not affect the stability of the iron-EDTA complexes.     

Lattice-solvent controlled spin transitions in iron(II) complexes

A series of spin transition (ST) iron(II) compounds of the type [FeII2](X)2.{S}2 (where is 4'-(4'-cyanophenyl)-1,2':6'1'-bispyrazolylpyridine, X=ClO4- or BF4-, and S is acetonitrile) was synthesized and magnetically investigated. The effects of the removal of the lattice-solvent molecules and of their different positions relative to the iron(II) cations on the ST process were investigated. Crystallization yields orange block (A.{S}2) crystals of the composition [FeII()2](ClO4)2.{S}2, and two polymorphic compounds of the stoichiometry [FeII()2](BF4)2.{S}2 as red coffin (B.{S}2) and orange block (C.{S}2) crystals. The Fe-N bond distances of A.{S}2 (from 1.921(9) to 1.992(3) A; at 150 K), B.{S}2 (from 1.943(2) to 2.017(2) A; at 180 K) and C.{S}2 (from 1.883(3) to 1.962(3) A; at 180 K) indicate low spin (LS) states of the respective iron(II) ions. Notably, the observed small difference in the Fe-N distances at 180 K for the two polymorphs B.{S}2and C.{S}2 are due to different positions of the acetonitrile molecules in the crystal lattices and illustrate the sensitivity of the spin transition properties on lattice-solvent effects. Variable-temperature single crystal X-ray studies display single-crystal thermochroism (red (LS)<-->orange (HS)) for A.{S}2 and B.{S}2 and ca. 3.6% decrease in the unit cell volume of A.{S}2 from 4403 A3 at 300 K to 4278 A3 at 150 K. The temperature dependent magnetic susceptibilities of A.{S}2 and B.{S}2 demonstrate systematic increase of the spin transition temperatures (T1/2) and continuous decreases of the hysteresis loop width (DeltaT1/2) upon slow lattice-solvent exclusion.     

Spectroscopic studies of copper(II) and iron(II) complexes of adriamycin

The complexes of adriamycin (ADM) with Cu(II) and Fe(II) have been studied by visible absorption, circular dichroism (CD) and fluorescence spectra, respectively. In Tris buffer at pH 7.0, either metal ions forms a single species with adriamycin: Cu(ADM)2 or Fe(ADM)3. Interaction of these two complexes with various biological molecules has been examined. It is shown that some amino acids, glutathione and albumin are able to remove the Cu(II) ion from Cu(II)-ADM complex, releasing the free drug. However, Fe(II)-ADM keeps in an undissociated form under the same conditions. The possibility of Fe(II) ADM as a new alternative drug has been discussed.