隧道结电场辅助下叔丁胺分子在Cu(111)表面跳跃(英文)

采用扫描隧道显微镜(STM)于78 K研究了单个叔丁胺分子在Cu(111)表面的横向跃迁现象.研究发现叔丁胺分子的跳跃几率随隧道电流的增加而线性增加,这表明该过程是单电子激发过程;在不同极性的隧道结电场作用下,叔丁基胺分子跳跃行为发生的几率不同,这种现象可以用电场辅助的扩散过程解释.在不同极性电场作用下叔丁胺分子在Cu(111)表面的吸附能和扩散势垒不同,从而表现出不同的跳跃几率.     

Trapping of DNA by dielectrophoresis

Under suitable conditions, a DNA molecule in solution will develop a strong electric dipole moment. This induced dipole allows the molecule to be manipulated with field gradients, in a phenomenon known as dielectrophoresis (DEP). Pure dielectrophoretic motion of DNA requires alternate current (AC) electric fields to suppress the electrophoretic effect of the molecules net charge. In this paper, we present two methods for measuring the efficiency of DEP for trapping DNA molecules as well as a set of quantitative measurements of the effects of strand length, buffer composition, and frequency of the applied electric field. A simple configuration of electrodes in combination with a microfluidic flow chamber is shown to increase the concentration of DNA in solution by at least 60-fold. These results should prove useful in designing practical microfluidic devices employing this phenomenon either for separation or concentration of DNA.     

Phase switching of a single isomeric molecule and associated characteristic rectification

Variations in molecular electronic structures related to conformational change are exceedingly attractive because of their key role in the understanding and development of functional processes in molecular electronics and biology. We observed, for the first time, the novel phase switching of a photoactive isomeric molecule, N-(2-mercaptoethyl)-4-phenylazobenzamide (Azo molecule) at a single-molecule level, which exhibits a distinctive change in the conductive characteristic under scanning tunneling microscope (STM) measurement. In comparison with the results obtained by the measurement of photoactive isomerization of the isolated Azo molecule, which was performed also for the first time, the observed characteristics are attributed to the results of the trans and cis phase transformation of the Azo molecule, under the condition of an external electric field and current flow. A specific point is that the potential landscape of the system is controllable by the electric field and provides a conformational stability with asymmetric bias dependence resulting in rectification.     

Behavior of polarizable models in presence of strong electric fields. I. Origin of nonlinear effects in water point-charge systems

In the current opinion, the inclusion of polarization response in classical computer simulations is considered as one of the most important and urgent improvements to be implemented in modern empirical potential models. In this work we focus on the capability of polarizable models, based on the pairwise Coulomb interactions, to model systems where strong electric fields enter into play. As shown by Masia, Probst, and Rey (MPR) [in J. Chem. Phys. 121, 7362 (2004)], when a molecule interacts with point charges, polarizable models show underpolarization with respect to ab initio methods. We prove that this underpolarization, clearly related to nonlinear polarization effects, cannot be simply ascribed to the lack of hyperpolarization in the polarizable models, as suggested by MPR. Analysis of the electron-density rearrangement induced on a water molecule by a point charge reveals a twofold level of polarization response. One level involves intramolecular charge transfer on the whole molecular volume, with the related polarization exhibiting a seemingly linear behavior with the external electric field. The other nonlinear polarization level occurs only at strong electric fields and is found to be strictly correlated to the quantum-mechanical nature of the water molecule. The latter type of polarization has a local character, being limited to the space region of the water lone pairs.     

电场作用下C60富勒烯二聚体分子的几何构型与失效

By the molecular mechanics/quantum mechanics method, the geometry distortion and configuration invalidity of dimmer C60fullerene (2C60) molecule in external electric field are simulated. The effect of the electric field, with three different directions, on geometry distortion, configuration invalidity, polarization charge distribution and dipole moment for 2C60 molecule is discussed systemtically. Further the geometry distortion and invalidity of 2C60 molecule are respectively compared with those of C60 fullerene molecule in electric field. By comparison, it is shown that geometry distortion and configuration invalidity behavior of 2C60 molecule are sensitive to the direction of electric field, when the directions of the applied electric field are parallel to the bridged C-C bonds. For 2C60molecule it is very easy for the configuration of 2C60 molecule to be invalidated and the invalidity mode is very particular as well.     

Modeling molecular effects on plasmon transport: silver nanoparticles with tartrazine

Modulation of plasmon transport between silver nanoparticles by a yellow fluorophore, tartrazine, is studied theoretically. The system is studied by combining a finite-difference time-domain Maxwell treatment of the electric field and the plasmons with a time-dependent parameterized method number 3 simulation of the tartrazine, resulting in an effective Maxwell∕Schro?dinger (i.e., classical∕quantum) method. The modeled system has three linearly arranged small silver nanoparticles with a radius of 2 nm and a center-to-center separation of 4 nm; the molecule is centered between the second and third nanoparticles. We initiate an x-polarized current on the first nanoparticle and monitor the transmission through the system. The molecule rotates much of the x-polarized current into the y-direction and greatly reduces the overall transmission of x-polarized current.     

外电场下氮化铝分子结构和光谱研究

以6-311＋G(2DF)为基函数, 采用密度泛函B3P86的方法研究了外电场作用下氮化铝(AlN)基态分子的几何结构、HOMO能级、LUMO能级、能隙及谐振频率. 结果表明, 外电场的大小和方向对AlN分子基态的这些性质有明显影响. 在所加的电场范围内, 随着外电场的增大分子键长减小, 谐振频率增大, 总能量升高, 在F＝0.02 a.u.时能量达到最大, 为－297.4217 a.u., 此后继续增大电场强度, 系统总能量则开始降低; EH 和EL 随着电场的增加均逐渐增大, 在 F＝0.01 a.u.时, EH 和EL均取得最大值, 分别为－0.2776和－0.0828 a.u., 随着电场的继续增大, 能级EH和EL均逐渐减小, 而能隙在外电场增大的过程中始终处于减小趋势.     

Current-induced rotation of helical molecular wires

We show that electric current running through a nanojunction with a biased helical molecule can induce unidirectional rotation of the molecular component. In an electric field, conduction electrons injected into the molecule are accelerated along the helical path going through its body, thereby gaining directed angular momentum. Conservation laws require that an angular momentum of the same size but opposite sense is imparted to the rigid-body rotation of the helix. We describe the angular momentum exchange processes that underlie the operation of the nanorotor, discuss factors limiting its efficiency, and propose potential applications.     

Molecular switch on a metal surface

We report a theoretical study for the conformational switching of molecules on Au(111) surface in the presence of an applied electric field. Ab initio calculations for N-(2-mercaptoethyl)benzamide indicate that this molecule, when adsorbed, can exist as two stable conformers of nearly equal energies, but the dipoles point in reverse directions with respect to the surface. An electric field can be used to "switch" one conformer to the other, and during this process, there is an abrupt change in the height of the molecule from the surface. This change is expected to cause a conductance switching in the system. Further calculations for N-(2-mercaptoethyl)-4-phenylazobenzamide suggest that the experimentally observed phase switching of this molecule is associated with a conformational change accompanied by dipole reversal.     

阿托伐他汀钙与β-环糊精相互作用的研究及应用

采用线性扫描伏安法和循环伏安法并结合紫外分光光度法研究了新型抗血脂紊乱药物阿托伐他汀钙(AC)与β-环糊精(-βCD)的相互作用.探讨了-βCD对AC的峰电流及AC对-βCD吸附峰电流的影响,测得在0.06mol/LKH2PO4-Na2HPO4(pH=7.17)缓冲溶液中,AC与-βCD包结比为1:1,用电流法测得包结物的形成常数为9.09×104L/mol.根据碱性介质条件下β-CD分子与AC形成包结物而使β-CD吸附峰电流减小的特性,建立了一种利用β-CD间接测定AC的伏安方法.     

Donor/conductor/acceptor triads spatially organized on the micrometer-length scale: an alternative approach to photovoltaic cells

We have used porous anodised Al(2)O(3) membranes as inert matrix for constructing and organizing spatially ternary donor/conductor/acceptor (DCA) systems exhibiting photovoltaic cell activity on the micrometric-length scale. These DCA triads were built stepwise by first growing a conducting polymer inside the membrane pores, thus forming nanorods that completely fill the internal pore space of the membrane. Then, an electron donor and an electron acceptor were adsorbed one on each side of the membrane, so that they were separated by a distance equal to the membrane thickness (ca. 60 microm), but electronically connected through the conductive polymer. When this device was placed between two electrodes and irradiated with visible light, electrons jumped from the donor molecule, crossed the membrane from side to side through the conductive polymer (a journey of about 60 microm!) until they finally reach the acceptor molecule. In so doing, an electric voltage was generated between the two electrodes, capable of maintaining an electric current flow from the membrane to an external circuit. Our DCA device constitutes the proof of a novel concept of photovoltaic cells, since it is based on the spatial organization at the micrometric scale of complementary, but not covalently linked, electron-donor and electron-acceptor organic species. Thus, our cell is based in translating photoinduced electron transfer between donors and acceptors, which is known to occur at the molecular nanometric scale, to the micrometric range in a spatially organised system. In addition our cell does not need the use of liquid electrolytes in order to operate, which is one of the main drawbacks in dye-sensitised solar cells.     

Using a micro electroporation chip to determine the optimal physical parameters in the uptake of biomolecules in HeLa cells

In this study, a new micro electroporation (EP) cell chip with three-dimensional (3D) electrodes was fabricated by means of MEMS technology, and tested on cervical cancer (HeLa) cells. Extensive statistical data of the threshold electric field and pulse duration were determined to construct an EP "phase diagram", which delineates the boundaries for 1) effective EP of five different size molecules and 2) electric cell lysis at the single-cell level. In addition, these boundary curves (i.e., electric field versus pulse duration) were fitted successfully with an exponential function with three constants. We found that, when the molecular size increases, the corresponding electroporation boundary becomes closer to the electric cell lysis boundary. Based on more than 2000 single-cell measurements on five different size molecules, the critical size of molecule was found to be approximately 40 kDa. Comparing to the traditional instrument, MEMS-based micro electroporation chip can greatly shorten the experimental time.     

Single-molecule interfacial electron transfer dynamics manipulated by an external electric current

Interfacial electron transfer (IET) dynamics in a 1,1'-dioctadecyl-3,3,3',3'-tetramethylindodicarbocyanine (DiD) dye molecule/indium tin oxide (ITO) film system have been probed at the ensemble and single-molecule levels. By comparing the difference in the external electric current (EEC) dependence of the fluorescence intensities and lifetimes of the ensembles and single molecules, it is shown that the single-molecule probe can effectively demonstrate IET dynamics. The backward electron transfer and electron transfer from the ground state induce single-molecule fluorescence quenching when an EEC is applied to the DiD/ITO film system.     

1H chemical shifts in NMR. Part 21--prediction of the 1H chemical shifts of molecules containing the ester group: a modelling and ab initio investigation

The 1H NMR spectra of 24 compounds containing the ester group are given and assigned. These data were used to investigate the effect of the ester group on the 1H chemical shifts in these molecules. These effects were analysed using the CHARGE model, which incorporates the electric field, magnetic anisotropy and steric effects of the functional group for long-range protons together with functions for the calculation of the two- and three-bond effects. The effect of the ester electric field was given by considering the partial atomic charges on the three atoms of the ester group. The anisotropy of the carbonyl group was reproduced with an asymmetric magnetic anisotropy acting at the midpoint of the carbonyl bond with values of Deltachi(parl) and Deltachi(perp) of 10.1 x 10(-30) and -17.1 x 10(-30) cm3 molecule(-1). An aromatic ring current (=0.3 times the benzene ring current) was found to be necessary for pyrone but none for maleic anhydride. This result was confirmed by GIAO calculations. The observed 1H chemical shifts in the above compounds were compared with those calculated by CHARGE and the ab initio GIAO method (B3LYP/6-31G**). For the 24 compounds investigated with 150 1H chemical shifts spanning a range of ca 10 ppm, the CHARGE model gave an excellent r.m.s. error (obs - calc) of <0.1 ppm. The GIAO calculations gave a very reasonable r.m.s. error of ca 0.2 ppm although larger deviations of ca 0.5 ppm were observed for protons near to the electronegative atoms. The accurate predictions of the 1H chemical shifts given by the CHARGE model were used in the conformational analysis of the vinyl esters methyl acrylate and methyl crotonate. An illustration of the use of the CHARGE model in the prediction of the 1H spectrum of a complex organic molecule (benzochromen-6-one) is also given.     

Effect of Parameters of Pulsed Electric Field on Average Current Density through Nafion 438 Membrane in Electrodialysis Cell

Pulsed electric fields (PEF) have been used to advantage in electroplating for more than half a century. Recently, interest has increased in the application of these electric modes in the membrane processes. In this work, the effect of parameters (potential, frequency of current, and duty cycle) of pulsed current mode on the average current density in the electrodialysis cell is studied. For this purpose, the plots of current vs. time were measured in the mode of pulsed potential drop on a Nafion 438 (Nafion^TM N438) cation-exchange membrane. It is shown that the largest gain in the current density of 33% can be attained by varying parameters of PEF.     

线性聚丙烯酰胺凝胶毛细管电泳的迁移特性

使用线性聚丙烯酰胺作为筛分介质,对片段长度为80～584bp的标准DNA样品进行毛细管电泳,利用激光诱导荧光方法检测信号,荧光染料为溴化乙啶。改变电场强度100～375V/cm,得到的迁移率曲线与电场强度和DNA片段长度成复杂的函数关系,已有的经典理论模型:Ogston模型、Reptation无拉伸模型和Reptation拉伸模型都不能正确地描述实验观察到的迁移率随电场强度和DNA片段长度的变化情况。因此,提出一种修正的Ogston筛分理论,假定迁移的DNA分子在电场强度方向延展拉伸,如同小分子穿过凝胶筛孔。在该修正模型中,DNA的迁移率仅依赖于电场强度、筛分介质浓度和片段长度,很好地解释了实验现象。     

外电场作用下甲基乙烯基硅酮分子结构和电子光谱

采用密度泛函B3P86方法在6-311++G(d, p)基组水平上优化得到了沿分子轴方向不同外电场(0-0.04 a.u.)作用下, 甲基乙烯基硅酮分子的基态电子状态、几何结构、电偶极矩和分子总能量. 在优化构型下利用杂化CIS-DFT方法(CIS-B3P86)研究了同样外电场条件下对甲基乙烯基硅酮的激发能和振子强度的影响. 计算结果表明, 分子几何构型与电场大小呈现强烈的依赖关系, 分子偶极矩μ随电场的增加先减小后急剧增大. 电场为零时, 分子总能量为-483.5532137 a.u., 随着电场增加, 能量升高, 在F=0.02 a.u.时达到最大值-483.5393952 a.u., 此后, 继续增大电场系统总能量则开始降低. 激发能随电场增加急剧减小, 表明在电场作用下, 分子易于激发和离解.     

Electric field effects on the performance of a candidate multipole molecular switch: a quantum computational study

Structural and electronic responses of the organic molecule di(4-nitro-2-methylenamine phenyl) diazene a candidate molecular switch, as an active device in a nanoelectronic circuit, to the external electric fields with strengths 5 x 10(-4) - 1.8 x 10(-2) a.u. included explicitly in the Hamiltonian are studied using B3LYP/6-31G* method. This study shows that thermodynamic formation functions are not affected significantly by the applied field. Electronic spatial extent show a negligibly small change (<2%) over the studied range of the electric field strength. Calculated electric dipole moments show significant sensitivity to the external electric field, which result consequently in much stronger interactions with the electrodes (poles) of the mother nanoelectronic circuit at higher electric field strengths. Natural bond orbital atomic charges analysis shows different field effects on different atoms depending on their positions with respect to the direction of the field. The applied field increases HOMO, LUMO, and the Fermi level energies; however, decreases the HOMO-LUMO gap (HLG) values. Results of this study show that it is possible to control field-induced charge redistribution over the molecule by using push-pull effects of different substitution via their connection points to the extended pi-system.     

Theoretical study of a conjugated aromatic molecular wire

In this study, an organic conjugated molecule, 4,4′-[ethane-1,2-diylidenedi(nitrilo)] dibenzenthiol designed and is proposed as a molecular wire. Structural and electronic responses of this aromatic molecular wire to the static electric field with intensities −1.6 × 10⁻² to +1.6 × 10⁻² a.u., are studied using the DFT-B3LYP/6-31G* level of theory. Natural bond orbital atomic charge analysis shows that the imposition of static external electric field induces polarization—localization of charge on the two ends of molecule, especially on considered terminal contact sulfur atoms. The frontier molecular orbitals (MOs) energy levels including the highest occupied MO (HOMO) and the lowest unoccupied MO (LUMO) and the HOMO–LUMO gap (HLG) values are modified by the static electric field as well. The electric dipole moment and polarizability of the proposed molecular wire under the studied electric field strengths are considerably increased. The current–voltage characteristic curve is estimated for the proposed molecular wire.